View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19773_high_18 (Length: 466)
Name: NF19773_high_18
Description: NF19773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19773_high_18 |
 | |
|
| [»] chr7 (25 HSPs) |
| |
|
| [»] scaffold0182 (1 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 430; Significance: 0; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 430; E-Value: 0
Query Start/End: Original strand, 17 - 466
Target Start/End: Original strand, 21666964 - 21667413
Alignment:
| Q |
17 |
acacatatcatgagcttagacgcaaaataaatgagcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttg |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21666964 |
acacatatcatgagcttagacgcaaaataaatgagcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttg |
21667063 |
T |
|
| Q |
117 |
ggccattactgcattccttgctgcgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgtt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
21667064 |
ggccattactgcattccttgctgcgtttatcgccattgttcttactttcattcagacatggtttacgattcacccggcttgctaataaaggtggctcgtt |
21667163 |
T |
|
| Q |
217 |
atgacaatgttgttttcgttatggcactcatcacttctctatggatttttaataggttgagtttttcttaatgaataaattttgggttaagtttgcttgt |
316 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21667164 |
atgacaatgttgttttcgttatggcactcatcacttctctatggatttttaatcggttgagtttttcttaatgaataaattttgggttaagtttgcttgt |
21667263 |
T |
|
| Q |
317 |
acatcatcatgactatgagtatttcaaaaataaagagtgccttttttcctgtattgtgtgtttgaattgaaacatgaataaattaatattctcattgatg |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21667264 |
acatcatcatgactatgagtatttcaaaaataaagagtgccttttttcctgtattgtgtgtttgaattgaaacatgaataaattaatattctcattgatg |
21667363 |
T |
|
| Q |
417 |
atctatgtgtactatattgatgcgattgtgttgattttatttagatgagt |
466 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
21667364 |
atctatgtgtactatattggtgcgattatgttgattttatttagatgagt |
21667413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 40 - 466
Target Start/End: Original strand, 21658131 - 21658560
Alignment:
| Q |
40 |
aaaataaatgagcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcattccttgctg |
139 |
Q |
| |
|
|||||| |||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
21658131 |
aaaatacatgatcattactgtaataaatacaatacttggatagcgcagggttttcatacttacttcagcagtccttgggccattattgcattcactgctg |
21658230 |
T |
|
| Q |
140 |
cgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttcgttatg |
239 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||| ||||| |||||| || |||||| ||| |||||||||||||||||||||||||||| |
|
|
| T |
21658231 |
cggttatcgcccttgttcttactttcattcagacatggtttacaattcaaccggctagcaaataaatgtgattcgttatgacaatgttgttttcgttatg |
21658330 |
T |
|
| Q |
240 |
gcactcatcacttctctatggatttttaataggttgagtttttcttaatgaataaattttgggttaagtttgcttgtacatcatcatgactatga----g |
335 |
Q |
| |
|
| || |||||||||||| ||||||||||||||||||||||||| ||| |||||||||||| ||||| |||| | | || | || ||||||||| | |
|
|
| T |
21658331 |
gaacacatcacttctctgtggatttttaataggttgagttttt-ttattgaataaattttaggttatgttttcgtcta---cgtcttgactatgagtacg |
21658426 |
T |
|
| Q |
336 |
tatttcaaaaataaagagtgccttttttcctgtattgtgtgtttgaattgaaacatgaataaattaatattctcattgatgatctatgtg-tac--tata |
432 |
Q |
| |
|
||||||||||||||||| |||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| |||| |
|
|
| T |
21658427 |
tatttcaaaaataaagattgccattttctttgtgttgtgtgtttgaattgtaacatgaataaattaatattctcattgatgatctacgtgttactatata |
21658526 |
T |
|
| Q |
433 |
ttgatgcgattgtgttgattttatttagatgagt |
466 |
Q |
| |
|
||| ||| ||| |||||||||| |||||||||| |
|
|
| T |
21658527 |
ttggtgccattatgttgattttgattagatgagt |
21658560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 17 - 466
Target Start/End: Original strand, 21698089 - 21698535
Alignment:
| Q |
17 |
acacatatcatgagcttagacgcaaaataaatgagcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttg |
116 |
Q |
| |
|
|||||||| |||| ||||| ||||||||||| ||||||| |||| | |||||||||||||||||| |||||||| | | | | |||||||||||||| |
|
|
| T |
21698089 |
acacatattatgatgttagatgcaaaataaataagcattatagtaacagatacaagacttggatagcgaagggttttgagaatcatttcagcagtccttg |
21698188 |
T |
|
| Q |
117 |
ggccattactgcattccttgctgcgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgtt |
216 |
Q |
| |
|
| |||||| ||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||| |||||||| | || | |
|
|
| T |
21698189 |
gaccattattgcattcagtgctgcgtctatcgcccttgttcttactctcattcagacattgtttacgattcacccggcttgcaaataaaggagattccct |
21698288 |
T |
|
| Q |
217 |
atgacaatgttgtttt-cgttatggcactcatcacttctctatggatttttaataggttgagtttttcttaatgaataaattttgggttaagtttgcttg |
315 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| ||| |||| |||||||||||||||||||| |||||||||||||||| ||||||||||| || |
|
|
| T |
21698289 |
atgacaatgttgttttccgttatggcactcatcatacttctctggaattttaataggttgagttttt-ttaatgaataaattttaggttaagtttgtgtg |
21698387 |
T |
|
| Q |
316 |
tacatcatcatgactatgagtatttcaaaaataaagagtgccttttttcctgtattgtgtgtttgaattgaaacatgaataaattaatattctcattgat |
415 |
Q |
| |
|
||| || ||||||||||||||| ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21698388 |
tacgtcgtcatgactatgagta-ctcaaaaataaagagtgccttttt--ctgtgttgtgtg-ttgaattgaaacatgaataaattaatattctcattgat |
21698483 |
T |
|
| Q |
416 |
gatctatgtg-tactatattgatgcgattgtgttgattttatttagatgagt |
466 |
Q |
| |
|
|||||||||| |||||||||| |||||| | ||||||| ||||||||||| |
|
|
| T |
21698484 |
gatctatgtgttactatattgttgcgataatactgattttgtttagatgagt |
21698535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 40 - 466
Target Start/End: Original strand, 21630448 - 21630865
Alignment:
| Q |
40 |
aaaataaatgagcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcattccttgctg |
139 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| |
|
|
| T |
21630448 |
aaaataaatgatcattactgtaataaatacaagacttggatagcgcagggttttcacacttacttcaacagtccttgggccattattgcattcattgctg |
21630547 |
T |
|
| Q |
140 |
cgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttcgttatg |
239 |
Q |
| |
|
|| || ||| ||||||||||||||||||||||||||||||||| ||||| ||| || || |||||| ||| |||||||||||||||||||||| ||||| |
|
|
| T |
21630548 |
cggttgtcgtccttgttcttactttcattcagacatggtttacaattcacccgactagcaaataaaagtgattcgttatgacaatgttgttttcattatg |
21630647 |
T |
|
| Q |
240 |
gcactcatcacttctctatggatttttaataggttgagtttttcttaatgaataaattttgggttaagtttgcttgtacatcatcatgactatgagtatt |
339 |
Q |
| |
|
||||||| ||||||||| |||||| | ||||| ||||| |||||||| |||| |||||||||||| |||| | | | ||||||||||| |
|
|
| T |
21630648 |
gcactcaacacttctctgtggattgt------gttgaattttt-ttaatgaaatttttttaggttaagtttgcgtgta---cgttttagctatgagtatt |
21630737 |
T |
|
| Q |
340 |
tcaaaaataaagagtgccttttttcctgtattgtgtgtttgaattgaaacatgaataaattaatattctcattgatgatctatgtg-tactatattgatg |
438 |
Q |
| |
|
||||||| ||||||||||||| | | || ||||||||||||||||||| |||||||||||||||||||| |||||||||| ||| | |||||||| || |
|
|
| T |
21630738 |
tcaaaaagaaagagtgcctttatatttctactgtgtgtttgaattgaaacttgaataaattaatattctcactgatgatctacgtgtttctatattgttg |
21630837 |
T |
|
| Q |
439 |
cgattgtgttgattttatttagatgagt |
466 |
Q |
| |
|
|||| |||||||||| ||||| ||||| |
|
|
| T |
21630838 |
agattatgttgattttgtttagttgagt |
21630865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 52 - 461
Target Start/End: Original strand, 21765610 - 21766016
Alignment:
| Q |
52 |
cattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcattccttgctgcgtttatcgccc |
151 |
Q |
| |
|
||||||| |||||||||||||| ||||||||| | |||||||| ||||||||||| || ||||||| || ||| ||| ||||||||||| |||| |||| |
|
|
| T |
21765610 |
cattactttaataaatacaagagttggatagcgctgggttttcgcacttacttcaacaatccttggaccgttattgccttccttgctgcatttactgccc |
21765709 |
T |
|
| Q |
152 |
ttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttcgttatggcactcatcact |
251 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||| |||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21765710 |
ttgctcttactttcattcagacatggtttacggttcacccggctagcaaataatggtggttcgttatgacaatgttgttttcgttatggcactcatcact |
21765809 |
T |
|
| Q |
252 |
tctctatggatttttaataggttgagtttttcttaatgaataaattttgggttaagtttgcttgtacatcatcatgactatga----gtatttcaaaaat |
347 |
Q |
| |
|
|||| |||||| |||||||||||| ||| ||||| |||||||||| |||||||||| | | | | || ||||||||| |||||||||| || |
|
|
| T |
21765810 |
tctc--tggattcttaataggttgaattt---ttaataaataaattttaggttaagttttcat---cgacgtcttgactatgagtatgtatttcaaagat |
21765901 |
T |
|
| Q |
348 |
aaagagtgccttttttcctgtattgtgtgtttgaattgaaacatgaataaattaatattctcattgatgatctatgtg-tactatattgatgcgattgtg |
446 |
Q |
| |
|
||||||||||||| | ||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| || |
|
|
| T |
21765902 |
aaagagtgcctttctctttgtgttgtgtgtttgaattaaaacaagaataaattaatattctcattgatgatctacgtgttactctattggtgcgattatg |
21766001 |
T |
|
| Q |
447 |
ttgattttatttaga |
461 |
Q |
| |
|
|| || ||||||||| |
|
|
| T |
21766002 |
tttatcttatttaga |
21766016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 48 - 454
Target Start/End: Original strand, 21705980 - 21706385
Alignment:
| Q |
48 |
tgagcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcattccttgctgcgtttatc |
147 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| | |||||||| |||||||| | || |||||||||| ||| ||| ||||||||||| |||| |
|
|
| T |
21705980 |
tgagcattactttaataaatacaagacttggatagcgctgggttttcgtacttacttaaacaatccttgggccgttattgccttccttgctgcttttact |
21706079 |
T |
|
| Q |
148 |
gcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttcgttatggcactcat |
247 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||| |||| |||||| | |||||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
21706080 |
gcccttgctcttactttcattcagacatggtttacagttcacccggctaacaaataaaggtgcttcgttatgacaatgttgttttcgttatggcattcat |
21706179 |
T |
|
| Q |
248 |
cacttctctatggatttttaataggttgagtttttcttaatgaataaattttgggttaagtttgcttgtacatcatcatgactatgagtatttcaaaaat |
347 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| | ||||||||||||| ||||||||||| ||||| || |||||||||||||| | | |||| |
|
|
| T |
21706180 |
cacttctctgtggatttttaataggttgagttttt-tatatgaataaattttaggttaagtttgtgtgtacgtcgccatgactatgagta-ctaataaat |
21706277 |
T |
|
| Q |
348 |
aaagagtgccttttttcctgtattgtgtgtttgaattg-aaacatgaataaattaatattctcattgatgatcta-tgtgtactatattgatgcgattgt |
445 |
Q |
| |
|
||| |||| |||||| ||| || | |||| ||||| |||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||||||| | |
|
|
| T |
21706278 |
aaatagtgactttttctttgtgctgagcgtttcaattgaaaacatgaataaattaatattctcattgatgatctactgt-tactctattggtgcgattat |
21706376 |
T |
|
| Q |
446 |
gttgatttt |
454 |
Q |
| |
|
|||||||| |
|
|
| T |
21706377 |
tttgatttt |
21706385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 39 - 466
Target Start/End: Original strand, 21773554 - 21773977
Alignment:
| Q |
39 |
caaaataaatgagcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcattccttgct |
138 |
Q |
| |
|
||||||| |||| |||||| |||||| || ||| || |||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
21773554 |
caaaatacatgatcattaccgtaatagatgcaatacatggatagcgcagggttttcgcacttacttcagcagtccttgggccattattgcattcattgct |
21773653 |
T |
|
| Q |
139 |
gcgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttcgttat |
238 |
Q |
| |
|
|| | ||||| ||||||||||||||||||||||||||||||||| || | ||| | || ||||||||||| ||||| ||| ||||||||||||||||| |
|
|
| T |
21773654 |
gctctcatcgcgcttgttcttactttcattcagacatggtttacggttaacccgccaagcaaataaaggtggttcgttgtgataatgttgttttcgttat |
21773753 |
T |
|
| Q |
239 |
ggcactcatcacttctctatggatttttaataggttgagtttttcttaatgaataaattttgggttaagtttgcttgtacatcatcatgactatgagtat |
338 |
Q |
| |
|
| |||||||||||| ||| ||||||||||||| ||||||||||| |||||||||||||||| || || ||| | |||| | || | ||| ||||||| |
|
|
| T |
21773754 |
gacactcatcacttgtctgtggatttttaatacgttgagttttt-ttaatgaataaattttctgtgaaattttcgtgta---cgtcttaact-tgagtat |
21773848 |
T |
|
| Q |
339 |
ttcaaaaataaagagtgccttttttcctgtattgtgtgtttgaattgaaacatgaataaattaatattctcattgatgatctatgtg-tactatattgat |
437 |
Q |
| |
|
|||||||||||||||||| ||| | | | | ||||||||||||||||||||||||||||||| ||| || ||||||||||||| | |||||||| | |
|
|
| T |
21773849 |
ttcaaaaataaagagtgcttttatatttctgctaggtgtttgaattgaaacatgaataaattaatactctaatagatgatctatgtgtttctatattgtt |
21773948 |
T |
|
| Q |
438 |
gcgattgtgttgattttatttagatgagt |
466 |
Q |
| |
|
| |||| ||| |||||||||||||||||| |
|
|
| T |
21773949 |
gagattatgtggattttatttagatgagt |
21773977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 32 - 248
Target Start/End: Original strand, 15715294 - 15715509
Alignment:
| Q |
32 |
ttagacgcaaaataaatgagcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcatt |
131 |
Q |
| |
|
|||||||||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
15715294 |
ttagacgcaagatacatgagcattatagtaataaatacaagacttggatagcgcagggttttcacacttacttcagcaatccttgggccattactgcatt |
15715393 |
T |
|
| Q |
132 |
ccttgctgcgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttt |
231 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||| ||||| || | ||| || || || |||||||| |||||||||||||||||||| |
|
|
| T |
15715394 |
ccttgctgcgtttatcgcccttgctcttactttcattcagacatgatttactgttaacccgcctagc-aaaaaaggtggttcgttatgacaatgttgttt |
15715492 |
T |
|
| Q |
232 |
tcgttatggcactcatc |
248 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
15715493 |
tcgttatggcactcatc |
15715509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 40 - 228
Target Start/End: Original strand, 21789841 - 21790029
Alignment:
| Q |
40 |
aaaataaatgagcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcattccttgctg |
139 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||| | |||||||||||||| |||||||||||||| |
|
|
| T |
21789841 |
aaaatacatgagcattactgtaataaatgcaagacttggatagcgctgggttttcacacttacttcagtaatccttgggccattattgcattccttgctg |
21789940 |
T |
|
| Q |
140 |
cgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttg |
228 |
Q |
| |
|
||||||||||||||| ||| ||||||||||| ||||||||| || || | ||||||||||| ||||||||| | |||||| |||||||| |
|
|
| T |
21789941 |
cgtttatcgcccttgctctaactttcattcaaacatggtttgcggttgacccggcttgctagtaaaggtggtttgttatggcaatgttg |
21790029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 39 - 233
Target Start/End: Original strand, 21787082 - 21787276
Alignment:
| Q |
39 |
caaaataaatgagcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcattccttgct |
138 |
Q |
| |
|
||||||| |||| ||||| ||||||| || ||| || ||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| ||||| |
|
|
| T |
21787082 |
caaaatacatgatcattattgtaatagatgcaatacatggatagcagagggttttcacacttacttcagcaatccttgggccattattgcattcattgct |
21787181 |
T |
|
| Q |
139 |
gcgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttc |
233 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||||||||||| || | |||||| || ||||||||||| |||||||| |||||||| |||| |
|
|
| T |
21787182 |
gcgtttactgcccttgttcttactttcattcaaacatggtttacggttaacccggctagcaaataaaggtggttcgttatggcaatgttgctttc |
21787276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 50 - 183
Target Start/End: Original strand, 21793489 - 21793622
Alignment:
| Q |
50 |
agcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcattccttgctgcgtttatcgc |
149 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||| ||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21793489 |
agcattaccgtaataaatacaagaattggatagcgcagcgttttcacactcacttcagcaatccttgggccattactgcattccttgctgcgtttatcgc |
21793588 |
T |
|
| Q |
150 |
ccttgttcttactttcattcagacatggtttacg |
183 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |
|
|
| T |
21793589 |
ccttgctcttactttcattcagacatggtttacg |
21793622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 59 - 395
Target Start/End: Complemental strand, 21803641 - 21803314
Alignment:
| Q |
59 |
gtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcattccttgctgcgtttatcgcccttgttct |
158 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||| ||||||||||| || ||||||| |||||| ||||||||||||||| ||||| ||||| | ||| |
|
|
| T |
21803641 |
gtaataaatacaagagttggatagcgttgggttttcgcacttacttcaacaatccttggaccattattgcattccttgctgcatttattgccctcgctct |
21803542 |
T |
|
| Q |
159 |
tactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttcgttatggcactcatcacttctctat |
258 |
Q |
| |
|
||||||||||||||||| |||||| ||||| ||| || || |||||||||||| ||||||||| ||||| | ||||||||||| || ||||||||| |
|
|
| T |
21803541 |
tactttcattcagacattgtttacaattcacccgactagcacataaaggtggcttattatgacaa---tgtttcctttatggcactcttctcttctctat |
21803445 |
T |
|
| Q |
259 |
ggatttttaataggttgagtttttcttaatgaataaattttgggttaagtttgcttgtacatc----atcatgactatgagtatttcaaaaataaagagt |
354 |
Q |
| |
|
|||| | ||||| ||| | ||| | ||| |||||||||||||||| ||| | || || |||||||||||||||||||||||||| | |
|
|
| T |
21803444 |
agattgt------gttga-tttcttttagt---taatttttgggttaagtttgagtgtccttcttgagtcttgactatgagtatttcaaaaataaagtga |
21803355 |
T |
|
| Q |
355 |
gccttttttcctgtattgtgtgtttgaattgaaacatgaat |
395 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
21803354 |
gcctttttctttgtaatgtgtgtttgaattgaaacatgaat |
21803314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 39 - 233
Target Start/End: Original strand, 21994914 - 21995108
Alignment:
| Q |
39 |
caaaataaatgagcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcattccttgct |
138 |
Q |
| |
|
||||||| |||| ||||||||||||| || ||||| ||||||| |||||||| ||||||||||||||| |||||||||| | | ||||||| ||||| |
|
|
| T |
21994914 |
caaaatagatgaacattactgtaatagatggaagacatggatagggcagggtttgaacacttacttcagcaatccttgggccttcattgcattcgttgct |
21995013 |
T |
|
| Q |
139 |
gcgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttc |
233 |
Q |
| |
|
|| ||||||||||||| ||||||||| ||||||||||||||||| |||| |||||| | ||||||||||| | |||||| |||||||| |||| |
|
|
| T |
21995014 |
gcatttatcgcccttgctcttactttaattcagacatggtttacagttcaaccggctagtaaataaaggtggtttgttatggcaatgttgctttc |
21995108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 52 - 260
Target Start/End: Original strand, 21746332 - 21746533
Alignment:
| Q |
52 |
cattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcattccttgctgcgtttatcgccc |
151 |
Q |
| |
|
|||||| |||| |||||||||||||||||| || ||||||| ||||||||||| || |||||||||| ||| ||||||| || |||| ||||| |||| |
|
|
| T |
21746332 |
cattaccgtaaaaaatacaagacttggataaaactgggtttttgcacttacttcaacaatccttgggccgttattgcattcgttcctgcatttattgccc |
21746431 |
T |
|
| Q |
152 |
ttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttcgttatggcactcatcact |
251 |
Q |
| |
|
||| |||||||||||||||||||| | ||||| |||||| || ||||||||||| | ||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
21746432 |
ttg------ctttcattcagacatggtttgcaattcacccggctagc-aataaaggtggttagttatgagaatgttgttttcgttatggcactcttcact |
21746524 |
T |
|
| Q |
252 |
tctctatgg |
260 |
Q |
| |
|
|||| |||| |
|
|
| T |
21746525 |
tctccatgg |
21746533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 329 - 466
Target Start/End: Original strand, 15715511 - 15715649
Alignment:
| Q |
329 |
ctatgagtatttcaaaaataaagagtgccttttttcctgtattgtgtgtttgaattgaaacatgaataaattaatattctcattgatgatctatgtg-ta |
427 |
Q |
| |
|
|||||| ||||| |||||||||||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||| | |
|
|
| T |
15715511 |
ctatgactatttaaaaaataaagagtgtctttttctttgtgttgtgtgtttgaattaaaacatgaataaattaatattctcgttgatgatctacgtgttt |
15715610 |
T |
|
| Q |
428 |
ctatattgatgcgattgtgttgattttatttagatgagt |
466 |
Q |
| |
|
||||||| ||| ||| |||||||||| ||||||||||| |
|
|
| T |
15715611 |
gtatattggtgcaattatgttgattttgtttagatgagt |
15715649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 134 - 244
Target Start/End: Original strand, 21648296 - 21648405
Alignment:
| Q |
134 |
ttgctgcgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttc |
233 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||||||||| |||| | ||||| |||||| || ||||| ||| | | |||||||||| ||||||||| |
|
|
| T |
21648296 |
ttgctgcatttatcgcccttgctcttactttcattcagacagtgtttgcaattcacccggctagc-aataacggttgttagttatgacaaagttgttttc |
21648394 |
T |
|
| Q |
234 |
gttatggcact |
244 |
Q |
| |
|
||||||||||| |
|
|
| T |
21648395 |
gttatggcact |
21648405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 466
Target Start/End: Original strand, 21793775 - 21793875
Alignment:
| Q |
371 |
tgtgtgtttgaattgaaacatgaataaatta----atattctcattgatgatctatgtg-tactatattgatgcgattgtgttgattttatttagatgag |
465 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||| | |||||||| || |||| |||||||||| |||||||||| |
|
|
| T |
21793775 |
tgtgtgtttgaattgaaacatgaataaattaatggatattctcatagatgatctacgtgtttctatattgttgagattatgttgattttgtttagatgag |
21793874 |
T |
|
| Q |
466 |
t |
466 |
Q |
| |
|
| |
|
|
| T |
21793875 |
t |
21793875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 134 - 240
Target Start/End: Original strand, 21728184 - 21728289
Alignment:
| Q |
134 |
ttgctgcgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttc |
233 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||| |||| |||||| ||| | ||||||| | || |||| ||| | |||||||||||||||||||| |
|
|
| T |
21728184 |
ttgctgcatttatcgcccttgctcttactttcattcggacagtgtttacaatttacccggctttc-aaaaaagatggttagttatgacaatgttgttttc |
21728282 |
T |
|
| Q |
234 |
gttatgg |
240 |
Q |
| |
|
||||||| |
|
|
| T |
21728283 |
gttatgg |
21728289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 134 - 253
Target Start/End: Original strand, 21653623 - 21653742
Alignment:
| Q |
134 |
ttgctgcgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttc |
233 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||||||||| || | ||| || | |||||||||| |||||||| ||| ||||||| |
|
|
| T |
21653623 |
ttgctgcggttatcgcccttgctcttactttcattcagacatggtttacggtttacccgcctaacaaataaaggtgctccgttatgataatattgttttt |
21653722 |
T |
|
| Q |
234 |
gttatggcactcatcacttc |
253 |
Q |
| |
|
| || || |||| ||||||| |
|
|
| T |
21653723 |
gctacggtactcttcacttc |
21653742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 134 - 244
Target Start/End: Original strand, 21683411 - 21683520
Alignment:
| Q |
134 |
ttgctgcgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttc |
233 |
Q |
| |
|
||||||| ||||||||| ||| ||||||||||||||||||| |||||| || | ||||| | | || |||| ||| | |||||||||||||||||||| |
|
|
| T |
21683411 |
ttgctgcatttatcgccattgctcttactttcattcagacagtgtttacagtttacccggcattcaaa-aaagatggttagttatgacaatgttgttttc |
21683509 |
T |
|
| Q |
234 |
gttatggcact |
244 |
Q |
| |
|
||||||||||| |
|
|
| T |
21683510 |
gttatggcact |
21683520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 109
Target Start/End: Original strand, 21653545 - 21653622
Alignment:
| Q |
32 |
ttagacgcaaaataaatgagcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagca |
109 |
Q |
| |
|
|||||||||||||||||||||||||| | || | ||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
21653545 |
ttagacgcaaaataaatgagcattacagcaacagctacaagacttggatagcgatgagttttcacacttacttcagca |
21653622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 395
Target Start/End: Original strand, 21746594 - 21746663
Alignment:
| Q |
326 |
tgactatgagtatttcaaaaataaagagtgccttttttcctgtattgtgtgtttgaattgaaacatgaat |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| ||| || |||||||||||||||||||||| |
|
|
| T |
21746594 |
tgactatgagtatttcaaaaataaagagtgtctttttctttgtgatgagtgtttgaattgaaacatgaat |
21746663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 395
Target Start/End: Original strand, 21787432 - 21787498
Alignment:
| Q |
326 |
tgactatgagtatttcaaaaataaagagtgccttttttcctgtattgtgtgtttgaattgaaacatgaat |
395 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||| |||| |||| ||||||||||||||||||||| |
|
|
| T |
21787432 |
tgactatgagtatctcagaaataaagagtgcctttt---ctgtgttgtttgtttgaattgaaacatgaat |
21787498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 21717486 - 21717593
Alignment:
| Q |
136 |
gctgcgtttatcgcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttcgt |
235 |
Q |
| |
|
||||| ||||| ||||||| ||||||||||||||||||| |||||| || | ||||||| | || |||| ||| | ||||||||||||||||||| | |
|
|
| T |
21717486 |
gctgcatttatagcccttgctcttactttcattcagacagtgtttacagtttacccggctttc-aaaaaagatggttagttatgacaatgttgtttttat |
21717584 |
T |
|
| Q |
236 |
tatggcact |
244 |
Q |
| |
|
||||||||| |
|
|
| T |
21717585 |
tatggcact |
21717593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 21717435 - 21717483
Alignment:
| Q |
61 |
aataaatacaagacttggatagcacagggttttcacacttacttcagca |
109 |
Q |
| |
|
|||||||||||||||||||||| ||||||| | ||| ||||||||||| |
|
|
| T |
21717435 |
aataaatacaagacttggatagtgcagggttattacagttacttcagca |
21717483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 156; Significance: 1e-82; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 48 - 466
Target Start/End: Original strand, 26950 - 27367
Alignment:
| Q |
48 |
tgagcattactgtaataaatacaagacttggatagcacagggttttcacacttacttcagcagtccttgggccattactgcattccttgctgcgtttatc |
147 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||| |||||||| ||||||||||| || ||||||| || ||| ||||||||||| ||| |||| |
|
|
| T |
26950 |
tgagcattactttaataaatacaagagttggatagcgttgggttttcgcacttacttcaacaatccttggaccgttattgcattccttgttgcatttact |
27049 |
T |
|
| Q |
148 |
gcccttgttcttactttcattcagacatggtttacgattcatccggcttgctaataaaggtggctcgttatgacaatgttgttttcgttatggcactcat |
247 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| |||| |||||| || ||||||||| | ||||||||||||||||||||| |||||||| |||| |
|
|
| T |
27050 |
gcccttgctcttactttcattcagacatggtttacggttcacccggctagcaaataaaggttgttcgttatgacaatgttgtttttgttatggctttcat |
27149 |
T |
|
| Q |
248 |
cacttctctatggatttttaataggttgagtttttcttaatgaataaattttgggttaagtttgcttgtacatc---atcatgactatgagtatttcaaa |
344 |
Q |
| |
|
|||||||| | |||| |||||||||||| ||||| ||||||||||||| || |||||||||| | | || || || |||| ||| |||||||||| |
|
|
| T |
27150 |
cacttctc--tcgattcttaataggttgaattttt-ttaatgaataaatattaggttaagttttcatcgacgtcttgattatgagtat--gtatttcaaa |
27244 |
T |
|
| Q |
345 |
aataaagagtgccttttttcctg-tattgtgtgtttgaattgaaacatgaataaattaatattctcattgatgatctatgtg-tactatattgatgcgat |
442 |
Q |
| |
|
|||||||||| | |||||| || | ||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||| || ||| |
|
|
| T |
27245 |
gataaagagtgtc-tttttcttgattctgtgtgtttcaattgaaacatgaataaattaatattctcattgatgatctacatgttactatattggtgtgat |
27343 |
T |
|
| Q |
443 |
tgtgttgattttatttagatgagt |
466 |
Q |
| |
|
| |||||||||| |||||| |||| |
|
|
| T |
27344 |
tatgttgattttgtttagacgagt |
27367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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