View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19773_high_37 (Length: 368)

Name: NF19773_high_37
Description: NF19773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19773_high_37
NF19773_high_37
[»] chr2 (48 HSPs)
chr2 (1-368)||(2377207-2377574)
chr2 (4-124)||(9496023-9496148)
chr2 (4-124)||(12734857-12734982)
chr2 (4-77)||(19336945-19337018)
chr2 (4-69)||(12141701-12141766)
chr2 (15-123)||(18959079-18959192)
chr2 (4-115)||(38430041-38430157)
chr2 (4-123)||(45543074-45543197)
chr2 (4-116)||(33504380-33504498)
chr2 (4-124)||(2610745-2610870)
chr2 (4-124)||(25834835-25834960)
chr2 (4-124)||(28508835-28508960)
chr2 (29-124)||(43573130-43573230)
chr2 (30-124)||(227372-227471)
chr2 (30-124)||(3635323-3635422)
chr2 (1-68)||(9556430-9556497)
chr2 (1-122)||(8180934-8181060)
chr2 (19-124)||(12882045-12882155)
chr2 (4-125)||(31959678-31959804)
chr2 (4-74)||(39029738-39029808)
chr2 (4-124)||(8197541-8197666)
chr2 (4-124)||(8202301-8202426)
chr2 (41-129)||(9531595-9531688)
chr2 (32-124)||(30306217-30306314)
chr2 (4-69)||(33287578-33287643)
chr2 (4-69)||(37470193-37470258)
chr2 (4-77)||(42149712-42149785)
chr2 (4-121)||(45077884-45078008)
chr2 (15-68)||(45437010-45437063)
chr2 (13-69)||(32402666-32402722)
chr2 (90-125)||(17429298-17429333)
chr2 (4-63)||(26670925-26670984)
chr2 (4-67)||(26784402-26784465)
chr2 (15-69)||(6219133-6219187)
chr2 (7-69)||(37452286-37452348)
chr2 (4-125)||(38452685-38452811)
chr2 (76-129)||(4807829-4807882)
chr2 (4-61)||(11412865-11412921)
chr2 (76-125)||(12474926-12474975)
chr2 (4-77)||(23915745-23915818)
chr2 (87-124)||(42543480-42543517)
chr2 (76-124)||(12520062-12520110)
chr2 (76-124)||(17670702-17670750)
chr2 (1-65)||(21834708-21834772)
chr2 (92-124)||(25721364-25721396)
chr2 (76-124)||(38328370-38328418)
chr2 (32-123)||(39709202-39709298)
chr2 (76-124)||(41763043-41763091)
[»] chr3 (44 HSPs)
chr3 (4-125)||(45289090-45289216)
chr3 (4-124)||(49042093-49042219)
chr3 (15-124)||(54128547-54128661)
chr3 (4-77)||(36304123-36304196)
chr3 (4-124)||(48508392-48508517)
chr3 (4-69)||(49841773-49841838)
chr3 (4-124)||(53519737-53519862)
chr3 (4-127)||(15296064-15296192)
chr3 (7-69)||(29601052-29601114)
chr3 (4-124)||(12096705-12096830)
chr3 (4-69)||(39600741-39600806)
chr3 (29-125)||(40106619-40106720)
chr3 (17-77)||(40116390-40116450)
chr3 (9-124)||(52156084-52156204)
chr3 (30-124)||(5169015-5169114)
chr3 (4-65)||(19162652-19162712)
chr3 (4-116)||(19676089-19676206)
chr3 (4-69)||(19758044-19758109)
chr3 (4-77)||(40116520-40116593)
chr3 (36-124)||(45374477-45374570)
chr3 (4-69)||(50960697-50960762)
chr3 (4-124)||(52138957-52139082)
chr3 (20-68)||(38431021-38431069)
chr3 (1-69)||(39235292-39235360)
chr3 (19-63)||(44571599-44571643)
chr3 (4-68)||(50237695-50237759)
chr3 (30-124)||(2133612-2133711)
chr3 (16-126)||(11284157-11284272)
chr3 (30-124)||(38060897-38060996)
chr3 (22-69)||(55244453-55244500)
chr3 (4-74)||(35033303-35033373)
chr3 (15-69)||(37779045-37779099)
chr3 (47-124)||(45486849-45486931)
chr3 (4-69)||(19737141-19737206)
chr3 (87-124)||(23610932-23610969)
chr3 (4-45)||(26490472-26490513)
chr3 (4-77)||(29475843-29475916)
chr3 (76-125)||(31566160-31566209)
chr3 (28-69)||(39208789-39208830)
chr3 (4-41)||(46431767-46431804)
chr3 (90-126)||(27192471-27192507)
chr3 (1-65)||(30294185-30294249)
chr3 (76-124)||(39512777-39512825)
chr3 (76-124)||(50249611-50249659)
[»] chr7 (53 HSPs)
chr7 (4-125)||(40979927-40980053)
chr7 (15-124)||(36101777-36101891)
chr7 (3-124)||(27648936-27649062)
chr7 (4-66)||(28542007-28542069)
chr7 (4-121)||(28627936-28628058)
chr7 (15-69)||(37976403-37976457)
chr7 (4-77)||(38135265-38135338)
chr7 (5-77)||(1569174-1569246)
chr7 (19-124)||(9210704-9210814)
chr7 (20-69)||(5577547-5577596)
chr7 (4-124)||(11594117-11594242)
chr7 (4-69)||(21517440-21517505)
chr7 (4-124)||(27893563-27893688)
chr7 (4-77)||(36239848-36239921)
chr7 (4-124)||(43281831-43281956)
chr7 (4-124)||(45836482-45836607)
chr7 (10-125)||(33731997-33732115)
chr7 (30-124)||(2885722-2885821)
chr7 (34-124)||(28208328-28208423)
chr7 (15-77)||(36136932-36136994)
chr7 (19-120)||(42969870-42969976)
chr7 (4-124)||(12841275-12841400)
chr7 (4-124)||(22349777-22349902)
chr7 (4-124)||(29650541-29650666)
chr7 (4-124)||(32631721-32631846)
chr7 (4-69)||(35922410-35922475)
chr7 (4-124)||(39906372-39906497)
chr7 (15-74)||(21078085-21078144)
chr7 (4-63)||(24549754-24549813)
chr7 (3-69)||(5418223-5418288)
chr7 (76-122)||(46355858-46355904)
chr7 (15-69)||(47848841-47848895)
chr7 (29-114)||(47852269-47852359)
chr7 (4-125)||(48919269-48919395)
chr7 (4-69)||(12966173-12966238)
chr7 (4-69)||(14057635-14057700)
chr7 (4-69)||(14367663-14367728)
chr7 (87-124)||(20899416-20899453)
chr7 (90-123)||(30914503-30914536)
chr7 (4-124)||(31682602-31682727)
chr7 (4-124)||(37618102-37618227)
chr7 (76-121)||(39812172-39812217)
chr7 (4-65)||(45601633-45601694)
chr7 (29-77)||(2882788-2882836)
chr7 (76-124)||(5418308-5418356)
chr7 (1-77)||(26741946-26742022)
chr7 (4-71)||(28562423-28562491)
chr7 (76-124)||(31005439-31005487)
chr7 (76-124)||(31869102-31869150)
chr7 (7-59)||(32368407-32368459)
chr7 (15-114)||(33103094-33103198)
chr7 (4-72)||(35559050-35559118)
chr7 (76-124)||(43491542-43491590)
[»] chr8 (33 HSPs)
chr8 (15-124)||(490503-490617)
chr8 (18-127)||(29520820-29520934)
chr8 (17-77)||(43904717-43904777)
chr8 (28-127)||(45419416-45419520)
chr8 (15-69)||(30559861-30559915)
chr8 (4-125)||(35914600-35914726)
chr8 (16-124)||(2216456-2216568)
chr8 (4-124)||(11523723-11523848)
chr8 (16-122)||(16917352-16917462)
chr8 (4-124)||(25473403-25473528)
chr8 (19-124)||(31715992-31716104)
chr8 (4-116)||(45041324-45041440)
chr8 (4-75)||(17491708-17491779)
chr8 (15-124)||(23492202-23492316)
chr8 (17-126)||(44529395-44529509)
chr8 (4-124)||(5908803-5908928)
chr8 (4-65)||(33827821-33827882)
chr8 (8-65)||(35643670-35643727)
chr8 (4-77)||(36069759-36069832)
chr8 (4-124)||(36545306-36545431)
chr8 (4-77)||(38391945-38392018)
chr8 (4-124)||(42469727-42469852)
chr8 (4-77)||(16705904-16705978)
chr8 (1-63)||(35825522-35825584)
chr8 (4-69)||(9904942-9905007)
chr8 (9-62)||(12966381-12966434)
chr8 (1-74)||(27037789-27037862)
chr8 (4-69)||(28169549-28169614)
chr8 (4-77)||(35362702-35362775)
chr8 (4-69)||(41971850-41971915)
chr8 (57-124)||(1928587-1928659)
chr8 (76-124)||(14742082-14742130)
chr8 (29-69)||(42584541-42584581)
[»] chr1 (54 HSPs)
chr1 (19-124)||(41560401-41560511)
chr1 (7-124)||(11941580-11941702)
chr1 (4-123)||(29128940-29129065)
chr1 (4-124)||(8796366-8796491)
chr1 (4-112)||(36623897-36624009)
chr1 (4-129)||(38807666-38807796)
chr1 (18-124)||(4707221-4707331)
chr1 (4-124)||(25979231-25979356)
chr1 (20-113)||(19908046-19908144)
chr1 (4-125)||(49347392-49347518)
chr1 (4-121)||(52532619-52532741)
chr1 (4-125)||(52921237-52921363)
chr1 (4-124)||(1210902-1211027)
chr1 (4-69)||(27520267-27520332)
chr1 (4-124)||(30202130-30202255)
chr1 (4-124)||(37311755-37311880)
chr1 (4-69)||(40416528-40416593)
chr1 (15-123)||(52561590-52561703)
chr1 (6-66)||(10200369-10200429)
chr1 (37-124)||(28090694-28090786)
chr1 (5-69)||(43375658-43375722)
chr1 (2-69)||(29577203-29577269)
chr1 (8-121)||(42501269-42501387)
chr1 (4-69)||(3818916-3818981)
chr1 (4-69)||(7762497-7762562)
chr1 (4-124)||(32404527-32404651)
chr1 (18-122)||(37462878-37462986)
chr1 (4-77)||(39318286-39318359)
chr1 (8-77)||(52878351-52878420)
chr1 (4-64)||(4001520-4001580)
chr1 (6-66)||(6025764-6025824)
chr1 (4-40)||(8676954-8676990)
chr1 (1-77)||(9509472-9509548)
chr1 (22-77)||(6084150-6084205)
chr1 (22-69)||(13827640-13827687)
chr1 (47-125)||(21769710-21769793)
chr1 (23-125)||(25715325-25715432)
chr1 (4-74)||(8672075-8672145)
chr1 (4-70)||(10569130-10569196)
chr1 (4-121)||(39140672-39140794)
chr1 (4-69)||(990518-990583)
chr1 (4-77)||(9599446-9599519)
chr1 (4-77)||(19936617-19936690)
chr1 (75-124)||(37099762-37099811)
chr1 (91-124)||(37430420-37430453)
chr1 (30-126)||(40568408-40568509)
chr1 (16-69)||(40920589-40920642)
chr1 (40-124)||(44941776-44941865)
chr1 (92-125)||(50771554-50771587)
chr1 (4-123)||(4590533-4590657)
chr1 (4-40)||(8203223-8203259)
chr1 (76-124)||(29577486-29577534)
chr1 (76-124)||(42539212-42539260)
chr1 (76-124)||(43481798-43481846)
[»] chr4 (54 HSPs)
chr4 (255-364)||(36766951-36767060)
chr4 (8-124)||(55007907-55008028)
chr4 (4-123)||(26037506-26037630)
chr4 (4-124)||(31959814-31959939)
chr4 (20-124)||(34208269-34208378)
chr4 (9-125)||(48622542-48622663)
chr4 (5-124)||(25574982-25575106)
chr4 (4-123)||(26024851-26024975)
chr4 (5-77)||(27049229-27049301)
chr4 (7-122)||(55388213-55388333)
chr4 (30-124)||(39100536-39100635)
chr4 (252-307)||(54980307-54980362)
chr4 (4-121)||(31459151-31459273)
chr4 (4-124)||(1777017-1777142)
chr4 (4-69)||(30621261-30621326)
chr4 (4-65)||(31043229-31043290)
chr4 (4-124)||(35690428-35690553)
chr4 (4-124)||(37488248-37488373)
chr4 (4-116)||(39708590-39708707)
chr4 (4-124)||(52569515-52569640)
chr4 (4-77)||(56439623-56439696)
chr4 (4-68)||(45204900-45204964)
chr4 (30-124)||(47265195-47265294)
chr4 (4-74)||(42639075-42639145)
chr4 (15-77)||(53518375-53518437)
chr4 (4-124)||(8286596-8286721)
chr4 (4-124)||(21528445-21528570)
chr4 (4-77)||(49987565-49987638)
chr4 (4-69)||(51421887-51421952)
chr4 (4-73)||(55768555-55768624)
chr4 (4-73)||(55832811-55832880)
chr4 (17-69)||(26510558-26510610)
chr4 (22-77)||(5306471-5306526)
chr4 (22-69)||(31339699-31339746)
chr4 (4-74)||(21237015-21237085)
chr4 (4-121)||(37042667-37042789)
chr4 (15-69)||(41192229-41192283)
chr4 (4-69)||(47147530-47147593)
chr4 (4-69)||(21107149-21107214)
chr4 (4-77)||(34233076-34233149)
chr4 (4-68)||(40420275-40420337)
chr4 (30-75)||(41729504-41729549)
chr4 (4-69)||(47372808-47372873)
chr4 (91-124)||(48451073-48451106)
chr4 (75-124)||(56130403-56130452)
chr4 (76-124)||(436463-436511)
chr4 (76-124)||(30634106-30634154)
chr4 (76-124)||(43434158-43434206)
chr4 (5-69)||(44384988-44385052)
chr4 (76-124)||(45209205-45209253)
chr4 (76-124)||(46153942-46153990)
chr4 (76-124)||(50238615-50238663)
chr4 (76-124)||(50238701-50238749)
chr4 (1-69)||(53540444-53540512)
[»] chr5 (32 HSPs)
chr5 (15-77)||(418086-418148)
chr5 (4-124)||(13561386-13561511)
chr5 (4-125)||(3302001-3302127)
chr5 (4-124)||(11675686-11675812)
chr5 (15-69)||(14667939-14667993)
chr5 (4-124)||(2915496-2915620)
chr5 (4-69)||(9235204-9235269)
chr5 (4-124)||(29816539-29816664)
chr5 (4-116)||(38685124-38685241)
chr5 (1-69)||(12576920-12576988)
chr5 (5-69)||(17340496-17340560)
chr5 (38-124)||(18855798-18855889)
chr5 (4-120)||(1287583-1287704)
chr5 (4-124)||(4496541-4496666)
chr5 (4-77)||(6889150-6889223)
chr5 (15-127)||(43557830-43557947)
chr5 (1-65)||(14725672-14725736)
chr5 (29-124)||(32442126-32442225)
chr5 (76-124)||(36551380-36551428)
chr5 (30-116)||(5558324-5558415)
chr5 (54-124)||(38132543-38132618)
chr5 (15-58)||(41894234-41894277)
chr5 (4-124)||(5303601-5303729)
chr5 (90-124)||(9460828-9460862)
chr5 (4-65)||(23980101-23980162)
chr5 (4-41)||(28186863-28186900)
chr5 (4-69)||(35615440-35615505)
chr5 (76-124)||(408494-408542)
chr5 (76-124)||(2645224-2645272)
chr5 (90-126)||(32489294-32489330)
chr5 (4-52)||(36200886-36200934)
chr5 (31-124)||(38830504-38830601)
[»] chr6 (27 HSPs)
chr6 (30-124)||(12890758-12890857)
chr6 (4-124)||(34505-34630)
chr6 (4-69)||(9593768-9593833)
chr6 (4-124)||(34143765-34143890)
chr6 (4-124)||(34156381-34156506)
chr6 (18-125)||(9706941-9707053)
chr6 (14-124)||(3206459-3206574)
chr6 (15-125)||(5096002-5096117)
chr6 (4-125)||(31818688-31818814)
chr6 (4-77)||(14389213-14389286)
chr6 (4-69)||(24665968-24666033)
chr6 (4-124)||(28085533-28085658)
chr6 (30-126)||(34934828-34934929)
chr6 (4-68)||(1748006-1748070)
chr6 (5-69)||(5897615-5897679)
chr6 (4-62)||(43119-43177)
chr6 (4-121)||(30031413-30031535)
chr6 (4-74)||(32756078-32756148)
chr6 (4-77)||(8364713-8364786)
chr6 (20-77)||(9568872-9568929)
chr6 (4-65)||(10098958-10099019)
chr6 (4-68)||(6055832-6055896)
chr6 (76-124)||(12133902-12133950)
chr6 (4-63)||(18238210-18238270)
chr6 (90-122)||(20864835-20864867)
chr6 (4-67)||(31831920-31831984)
chr6 (76-124)||(33730199-33730247)
[»] scaffold0570 (1 HSPs)
scaffold0570 (4-124)||(948-1073)
[»] scaffold0041 (1 HSPs)
scaffold0041 (4-125)||(16735-16861)
[»] scaffold0180 (1 HSPs)
scaffold0180 (4-69)||(25503-25569)
[»] scaffold0025 (1 HSPs)
scaffold0025 (15-77)||(39487-39549)
[»] scaffold0279 (1 HSPs)
scaffold0279 (4-41)||(17696-17733)
[»] scaffold0010 (1 HSPs)
scaffold0010 (4-77)||(160376-160449)
[»] scaffold0168 (1 HSPs)
scaffold0168 (76-124)||(28889-28937)
[»] scaffold0018 (1 HSPs)
scaffold0018 (76-124)||(31702-31750)


Alignment Details
Target: chr2 (Bit Score: 368; Significance: 0; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 1 - 368
Target Start/End: Original strand, 2377207 - 2377574
Alignment:
Q  1 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaatccatgtcgtcggccccacttagt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377207 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaatccatgtcgtcggccccacttagt 2377306  T
Q  101 gagataaggcttggttattgttgtagtgtccccctcaacttaccaactgagctacctggttggaaagatgagatttgtgttcaaataatgcagtgtcaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377307 gagataaggcttggttattgttgtagtgtccccctcaacttaccaactgagctacctggttggaaagatgagatttgtgttcaaataatgcagtgtcaat 2377406  T
Q  201 ttttaaacttaacattagatatacatataggtctcatttttcagttttctgcatacagatggacaaagcttctgttcttggagaagctataaggtactta 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377407 ttttaaacttaacattagatatacatataggtctcatttttcagttttctgcatacagatggacaaagcttctgttcttggagaagctataaggtactta 2377506  T
Q  301 aagcaaatggaagagaaagtgagtgttcttgaggaggaacagaaaaggaagaaaactgtggaatctgt 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377507 aagcaaatggaagagaaagtgagtgttcttgaggaggaacagaaaaggaagaaaactgtggaatctgt 2377574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 9496023 - 9496148
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||| | ||||||||||||  ||||||||||||||||| |||||| |||||||||||||||| |||||     |||||||| | |  |||||||||    
T  9496023 aaactattcagaaagatttagaggttaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccaaccccactta 9496122  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| || ||||||||||| |||||||    
T  9496123 gtgggacaaggcttggttgttgttgt 9496148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 12734857 - 12734982
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| |||||| |||||||||||| ||| | |||     |||||||| |||| |||||||||    
T  12734857 aaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggtgtaatttgatccatgtagtcgaccccactta 12734956  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  12734957 gtgggataaggcttggttgttgttgt 12734982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 19337018 - 19336945
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    ||||||| || ||||||||||||| |||||||||||||| || |||||| |||||||||||||||| |||||||    
T  19337018 aaactataaagaaagatttagagattaatgagttggatcgaaatatggtttatgatagaacattatggcgtaat 19336945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 12141701 - 12141766
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||  ||||| ||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  12141701 aaactattaggaaagacttagagattaatgacttggatccaaatatggtatatgatagaacattat 12141766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 123
Target Start/End: Original strand, 18959079 - 18959192
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataagg 109  Q
    ||||| || |||| |||||||||||||| || |||||| |||||||||||||||| || ||     |||||||| |  | |||||||||||| |||||||    
T  18959079 aaagacttggagattaatgagttggatcaaaatatggtctatgatagaacattatggcataatttgatccatgtagctgaccccacttagtgggataagg 18959178  T
Q  110 cttggttattgttg 123  Q
    ||||||||||||||    
T  18959179 cttggttattgttg 18959192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 38430041 - 38430157
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| |||||||||||||   |||||||||||||||| |||||| | |||||||||| ||| |||     | |||||||| | || |||||||||    
T  38430041 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccactta 38430140  T
Q  99 gtgagataaggcttggt 115  Q
    |||||||||||||||||    
T  38430141 gtgagataaggcttggt 38430157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 45543197 - 45543074
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    ||||||||| |||||||||||||  ||||||||| ||||||| |||||| |||||||||||||||| |||||     ||| |||| | || |||||||||    
T  45543197 aaactattagaaaagatttagagg-taatgagttcgatccaaatatggtttatgatagaacattatggcgtactttgatctatgtagccgaccccactta 45543099  T
Q  99 gtgagataaggcttggttattgttg 123  Q
    ||| ||||| ||||| || ||||||    
T  45543098 gtgggataatgcttgcttgttgttg 45543074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 33504380 - 33504498
Alignment:
Q  4 aaactattaaaaaagatttagagaat-aatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactt 97  Q
    |||||||||| |||||| |||||| | ||| ||||||||  || ||||||||||||||||||||||| |||||     |||||| | | || ||||||||    
T  33504380 aaactattaagaaagatctagagatttaataagttggattgaaatatggtatatgatagaacattatggcgtaatttgatccatctagccgaccccactt 33504479  T
Q  98 agtgagataaggcttggtt 116  Q
    |||| ||||||||||||||    
T  33504480 agtgggataaggcttggtt 33504498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 2610745 - 2610870
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||| ||     ||||||   || |||||||||    
T  2610745 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgttatttgatccatgtaaccgaccccactta 2610844  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    |||||||||||||||||| |||||||    
T  2610845 gtgagataaggcttggttgttgttgt 2610870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 25834835 - 25834960
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| |||||| |||||||||||| | | |||     | |||||||| | || |||||||||    
T  25834835 aaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactgtggcgtcatttgatccatgtagccgaccccactta 25834934  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  25834935 gtgggataaggcttggttgttgttgt 25834960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 28508835 - 28508960
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  28508835 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 28508934  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  28508935 gtgggataaggcttggttgttgttgt 28508960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 43573230 - 43573130
Alignment:
Q  29 taatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttg 123  Q
    ||||||||||||||||| |||| | |||||| |||| |||| |||||||     |||||| | || |||||||||||| |||||||||||||| ||||||    
T  43573230 taatgagttggatccaaatatgatttatgatcgaacgttatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttg 43573131  T
Q  124 t 124  Q
    |    
T  43573130 t 43573130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 227372 - 227471
Alignment:
Q  30 aatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||||| |||||||||||||| |||||||    
T  227372 aatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 227471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 3635422 - 3635323
Alignment:
Q  30 aatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||||||||| |||||| | |||||||||| ||| |||| ||     |||||| | || |||||||||||| |||||||||||||| |||||||    
T  3635422 aatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 3635323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9556497 - 9556430
Alignment:
Q  1 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacatta 68  Q
    ||||||||||||| |||||| ||| || |||||||||||||| |  |||||| |||||||||||||||    
T  9556497 gataaactattaagaaagatctagtgattaatgagttggatcaagatatggtttatgatagaacatta 9556430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 8180934 - 8181060
Alignment:
Q  1 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccac 95  Q
    ||||||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||||| |     | |||||||| | || ||||||    
T  8180934 gataaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatagtgtcatttgatccatgtagccgaccccac 8181033  T
Q  96 ttagtgagataaggcttggttattgtt 122  Q
    |||||| |||||||||| ||| |||||    
T  8181034 ttagtgggataaggcttcgttgttgtt 8181060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 12882155 - 12882045
Alignment:
Q  19 atttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttg 113  Q
    ||||||||  ||||||||||||||||| |||||| | |||||||||||| | |||||     |||||||| | |  || ||||||||| |||||||||||    
T  12882155 atttagaggttaatgagttggatccaaatatggtttgtgatagaacattttggcgtaatttgatccatgtagcctacctcacttagtgggataaggcttg 12882056  T
Q  114 gttattgttgt 124  Q
    ||| |||||||    
T  12882055 gttgttgttgt 12882045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 31959678 - 31959804
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| |||||| |||||||||||| ||| || ||     |||||||| |  | |||||||||    
T  31959678 aaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcataatttgatccatgtagcagaccccactta 31959777  T
Q  99 gtgagataaggcttggttattgttgta 125  Q
    ||  |||||||||||||| ||||||||    
T  31959778 gtaggataaggcttggttgttgttgta 31959804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 39029738 - 39029808
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgt 74  Q
    |||| |||| |||||||||||||   |||||||||||||||| |||||| | |||||||||||||| ||||    
T  39029738 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacattatggcgt 39029808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 8197666 - 8197541
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||||||||| |||||| || ||| |||||||||||||  || |||| |||||||||||| ||||| |||     | |||||||| | || ||| |||||    
T  8197666 aaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagccgaccctactta 8197567  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| ||||| |||||||| |||||||    
T  8197566 gtgggataatgcttggttgttgttgt 8197541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 8202426 - 8202301
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||||||||| |||||| || ||| |||||||||||||  || |||| |||||||||||| ||||| |||     | |||||||| | || ||| |||||    
T  8202426 aaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatattatggcgtcgtttgatccatgtagccgaccctactta 8202327  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| ||||| |||||||| |||||||    
T  8202326 gtgggataatgcttggttgttgttgt 8202301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 129
Target Start/End: Complemental strand, 9531688 - 9531595
Alignment:
Q  41 tccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgtagtgt 129  Q
    ||||| |||||| |||||| ||||||||| |||||||     |||||| | || |||||||||||| |||||||||||||| ||||||| ||||    
T  9531688 tccaaatatggtttatgatggaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtgt 9531595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 30306217 - 30306314
Alignment:
Q  32 tgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||||| |||||||||||||| |||||||    
T  30306217 tgagttggatccaaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30306314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 33287578 - 33287643
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||| |||||| |||| | ||||||||| |||| || |||||| ||||||||||||||||    
T  33287578 aaactattaagaaagatctagaaattaatgagttagatcgaaatatggtttatgatagaacattat 33287643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 37470258 - 37470193
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||  | |||| |||||| |||||||||||||| || ||||| |||||||||||||||||    
T  37470258 aaactattaggacagatctagagattaatgagttggatcgaaatatggcatatgatagaacattat 37470193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 42149785 - 42149712
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||| |||||| |||||| || |||| |||||  || |||||| |||||||||||||||| |||||||    
T  42149785 aaactattaagaaagatctagagattattgagctggatagaaatatggtttatgatagaacattatggcgtaat 42149712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 45077884 - 45078008
Alignment:
Q  4 aaactattaaaaaagatttagagaataat--gagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccact 96  Q
    |||||||||| ||||||||||||| ||||  |||||||||| || ||| || ||||||||||||| || || ||     ||||||||   || |||||||    
T  45077884 aaactattaagaaagatttagagattaatgagagttggatcgaaatatagtttatgatagaacataatggcataatttgatccatgtaaccgaccccact 45077983  T
Q  97 tagtgagataaggcttggttattgt 121  Q
    ||||||||||| |||||||| ||||    
T  45077984 tagtgagataaagcttggttgttgt 45078008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 45437010 - 45437063
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacatta 68  Q
    ||||||||||||| |||||  |||||||||| |||||||| |||||||||||||    
T  45437010 aaagatttagagattaatgcattggatccaaatatggtatttgatagaacatta 45437063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 32402666 - 32402722
Alignment:
Q  13 aaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||| |||||| |||||||||||||  || || ||||||||||||||||||||    
T  32402666 aaaaagatctagagattaatgagttggatagaaataaggtatatgatagaacattat 32402722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 17429298 - 17429333
Alignment:
Q  90 ccccacttagtgagataaggcttggttattgttgta 125  Q
    ||||||||||||||||||||||||||| ||||||||    
T  17429298 ccccacttagtgagataaggcttggttgttgttgta 17429333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 26670925 - 26670984
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaa 63  Q
    |||||||||| ||||||||||||| |||||||||||| | || |||| | ||||||||||    
T  26670925 aaactattaagaaagatttagagattaatgagttggaccaaaatatgatttatgatagaa 26670984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 26784465 - 26784402
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacatt 67  Q
    |||||||||| |||||| |||||| |||||||||| ||  || |||||||||||||| ||||||    
T  26784465 aaactattaagaaagatatagagattaatgagttgaatagaaatatggtatatgataaaacatt 26784402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 6219133 - 6219187
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||||||| || ||||||||| | || |||||| ||||||||||||||||    
T  6219133 aaagatttagagattagtgagttggaccgaaatatggtttatgatagaacattat 6219187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 37452348 - 37452286
Alignment:
Q  7 ctattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||| ||||| ||||||| ||||||||||||   || |||||| ||||||||||||||||    
T  37452348 ctattaagaaagaattagagattaatgagttggacagaaatatggtttatgatagaacattat 37452286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 38452811 - 38452685
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| ||||||| |||| ||| | || ||     |||||| | || |||||||||    
T  38452811 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgataaaacactatggtgtcattcgatccatgtagccgaccccactta 38452712  T
Q  99 gtgagataaggcttggttattgttgta 125  Q
    ||| |||||||||||||| ||||||||    
T  38452711 gtgggataaggcttggttgttgttgta 38452685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 4807829 - 4807882
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgtagtgt 129  Q
    |||||||| | || |||||||||||| |||||||||||||| ||||||| ||||    
T  4807829 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgttgtgt 4807882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 11412865 - 11412921
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatag 61  Q
    |||||||||  ||||||| ||||| ||||||||||||||||| |||||| ||||||||    
T  11412865 aaactattaggaaagatt-agagattaatgagttggatccaaatatggtttatgatag 11412921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 12474975 - 12474926
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgta 125  Q
    |||||||| | || |||||||||||| |||||||||||||| ||||||||    
T  12474975 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 12474926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 23915818 - 23915745
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||| ||| || |||||| ||||||| ||||   ||||||||| |||||||||||| ||| |||||||    
T  23915818 aaactattaagaaaaatctagagattaatgaggtggacagaactatggtttatgatagaacactatggcgtaat 23915745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 42543480 - 42543517
Alignment:
Q  87 cggccccacttagtgagataaggcttggttattgttgt 124  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  42543480 cggccccacttagtgggataaggcttggttgttgttgt 42543517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 12520110 - 12520062
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  12520110 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12520062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 17670702 - 17670750
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  17670702 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 17670750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21834708 - 21834772
Alignment:
Q  1 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaaca 65  Q
    ||||||||||||  ||| ||||| ||| |||||||||||||| || | |||| ||||||||||||    
T  21834708 gataaactattaggaaatatttatagattaatgagttggatctaaatttggtttatgatagaaca 21834772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 25721396 - 25721364
Alignment:
Q  92 ccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||| ||||||||||||||||||||||    
T  25721396 ccacttagtgggataaggcttggttattgttgt 25721364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 38328418 - 38328370
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  38328418 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 38328370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 39709298 - 39709202
Alignment:
Q  32 tgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttg 123  Q
    ||||||||||| || |||||| |||||| ||||| ||| |||||||     |||||| | || |||||||||||| |||| ||||||||| ||||||    
T  39709298 tgagttggatcaaaatatggtttatgattgaacactatggcgtaatttgatccatgtagccgaccccacttagtgggatatggcttggttgttgttg 39709202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 41763091 - 41763043
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  41763091 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 41763043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 45289216 - 45289090
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||  ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||     |||||||||| |  |||||||||    
T  45289216 aaactattaggaaagatttagagattaatgagttggatccaaatatggtttatgatagaacattatagcataatttgatccatgtcgccaaccccactta 45289117  T
Q  99 gtgagataaggcttggttattgttgta 125  Q
    ||| |||||||||||||| ||||||||    
T  45289116 gtgggataaggcttggttgttgttgta 45289090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 49042093 - 49042219
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatgg-tatatgatagaacattatagcgta-----atccatgtcgtcggccccactt 97  Q
    |||||||||  ||||||||||||  ||||||||||||||||| ||||| | |||||||||||| ||| |||||     |||||||| | || ||||||||    
T  49042093 aaactattaggaaagatttagaggttaatgagttggatccaaatatggttttatgatagaacactatggcgtaatttgatccatgtagccgaccccactt 49042192  T
Q  98 agtgagataaggcttggttattgttgt 124  Q
     |||||||||||||||||| |||||||    
T  49042193 ggtgagataaggcttggttgttgttgt 49042219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 54128547 - 54128661
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataagg 109  Q
    ||||||||||||   ||||||||||| |||| |||||| |||||||||||||||| || ||     |||||||| | || |||||||||||| |||||||    
T  54128547 aaagatttagaggtcaatgagttggacccaaatatggtttatgatagaacattatggcataatttgatccatgtaggcgaccccacttagtgggataagg 54128646  T
Q  110 cttggttattgttgt 124  Q
    ||||||| |||||||    
T  54128647 cttggttgttgttgt 54128661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 36304123 - 36304196
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||| |||||| |||||| |||||||||||||| || |||||| |||||||| ||||||| |||||||    
T  36304123 aaactattaagaaagatctagagattaatgagttggatcaaaatatggtttatgataggacattatggcgtaat 36304196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 48508392 - 48508517
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||| ||| |||||| |||||||||||| ||| |||||     |||||||| | || |||||||||    
T  48508392 aaaccattagaaaggatttagaggtcaatgagttggattcaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccactta 48508491  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  48508492 gtgggataaggcttggttgttgttgt 48508517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 49841773 - 49841838
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||| |||||| || ||| |||||||||||||| || |||||||||||||||||||||||    
T  49841773 aaactattaacaaagatctaaagattaatgagttggatcgaaatatggtatatgatagaacattat 49841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 53519737 - 53519862
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| ||||||||||||||||||   |||||||||||||||| || ||| | |||||||||| |||  ||| ||     |||||| | || |||||||||    
T  53519737 aaaccattaaaaaagatttagaggtcaatgagttggatccaaataaggtttttgatagaacactatgacgtcatttgatccatgtagccgaccccactta 53519836  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    |||||||||||||||||| |||||||    
T  53519837 gtgagataaggcttggttgttgttgt 53519862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 15296064 - 15296192
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||  ||||||||||||  |||||| |||||||||| |||| | |  ||||||||||||| | |||     |||||||| | || |||||||||    
T  15296064 aaactattaggaaagatttagaggttaatgaattggatccaaatatgatttcggatagaacattatggtgtaatttgatccatgtggccgaccccactta 15296163  T
Q  99 gtgagataaggcttggttattgttgtagt 127  Q
    ||| |||||||||||||| ||||||||||    
T  15296164 gtgggataaggcttggttgttgttgtagt 15296192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 29601052 - 29601114
Alignment:
Q  7 ctattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||| ||||||||||||| ||||||||||||| ||| ||| || ||||||||||||||||    
T  29601052 ctattaagaaagatttagagattaatgagttggattcaaatatagtttatgatagaacattat 29601114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 12096830 - 12096705
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  12096830 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 12096731  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  12096730 gtgggataaggcttggttgttgttgt 12096705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 39600806 - 39600741
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||| ||||||||||||  ||||||||||||||||| | |||| || |||||||||||||    
T  39600806 aaactattaagaaagatttagaggttaatgagttggatccaaatctggtttacgatagaacattat 39600741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 40106720 - 40106619
Alignment:
Q  29 taatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttggttattgttg 123  Q
    ||||||||||||||||| |||||| ||||||||||||||||  | ||     ||| |||| || | |||||||||||| |||||||||||||| ||||||    
T  40106720 taatgagttggatccaaatatggtttatgatagaacattatgacataatttgatcaatgtagtggaccccacttagtgggataaggcttggttgttgttg 40106621  T
Q  124 ta 125  Q
    ||    
T  40106620 ta 40106619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 40116450 - 40116390
Alignment:
Q  17 agatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    ||||||||||| |||||||||||| | || |||||| |||||||||||||||| |||||||    
T  40116450 agatttagagattaatgagttggaccgaaatatggtttatgatagaacattatggcgtaat 40116390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 52156204 - 52156084
Alignment:
Q  9 attaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccacttagtgag 103  Q
    |||| ||| |||||||||   |||||||||||||||| |||||| |||||||||||| ||| |||     | |||||||| | || |||||||||||| |    
T  52156204 attagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtcatctgatccatgtagccgaccccacttagtggg 52156105  T
Q  104 ataaggcttggttattgttgt 124  Q
    |||||||| |||| |||||||    
T  52156104 ataaggctcggttgttgttgt 52156084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 5169015 - 5169114
Alignment:
Q  30 aatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||||||||| |||||| | |||||||||| ||| |||| ||     |||||| | || |||||||||||| |||||||||||||| |||||||    
T  5169015 aatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 5169114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 19162712 - 19162652
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaaca 65  Q
    |||||||||  ||||||||||||| ||||||||||||| ||| ||||||| |||||||||||    
T  19162712 aaactattaggaaagatttagagattaatgagttggatgcaagtatggta-atgatagaaca 19162652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 19676206 - 19676089
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||||||||  ||| ||||||||  ||||||||||||||||| |||| | ||||||||| |||||| |||     | |||||||| |  | |||||||||    
T  19676206 aaactattaggaaaaatttagaggttaatgagttggatccaaatatgctgtatgatagagcattatggcgtgatttgatccatgtagctgaccccactta 19676107  T
Q  99 gtgagataaggcttggtt 116  Q
    ||| ||||||||||||||    
T  19676106 gtgggataaggcttggtt 19676089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 19758044 - 19758109
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||  ||| ||||||||| ||||||||||||||  | |||||| ||||||||||||||||    
T  19758044 aaactattaggaaatatttagagattaatgagttggatctcaatatggtttatgatagaacattat 19758109  T

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Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 40116593 - 40116520
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||  | ||||||||||| |||||||||||| | || |||||| |||||||||||||| | |||||||    
T  40116593 aaactattaggatagatttagagattaatgagttggaccgaaatatggtttatgatagaacattgtggcgtaat 40116520  T

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Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 45374570 - 45374477
Alignment:
Q  36 ttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    ||||||||||||||||| |  ||||||||||||| |||||||     |||||| |  | |||||||||||| |||||||||||||| |||||||    
T  45374570 ttggatccaactatggtttcggatagaacattatggcgtaatttaatccatgtagctgaccccacttagtgggataaggcttggttgttgttgt 45374477  T

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Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 50960762 - 50960697
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||  |||| |||||||| ||||||||||||||||| |||||| ||| ||||| ||||||    
T  50960762 aaactattaggaaaggtttagagattaatgagttggatccaaatatggtgtatcatagaccattat 50960697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 52138957 - 52139082
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| |||  ||| ||     |||||| | || |||||||||    
T  52138957 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgttatttgatccatgtagccgaccccactta 52139056  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  52139057 gtgggataaggcttggttgttgttgt 52139082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 38431021 - 38431069
Alignment:
Q  20 tttagagaataatgagttggatccaactatggtatatgatagaacatta 68  Q
    |||||||  ||||||||||||||||| |||||| |||||||||||||||    
T  38431021 tttagaggttaatgagttggatccaaatatggtttatgatagaacatta 38431069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 39235292 - 39235360
Alignment:
Q  1 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||||||  |||||||||||   |||||||||||||| || |||||| || |||||||||||||    
T  39235292 gataaactattaggaaagatttagaagttaatgagttggatctaaatatggtttacgatagaacattat 39235360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 44571599 - 44571643
Alignment:
Q  19 atttagagaataatgagttggatccaactatggtatatgatagaa 63  Q
    ||||||||| ||||||||||||||||| |||||| ||||||||||    
T  44571599 atttagagattaatgagttggatccaaatatggtttatgatagaa 44571643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 50237759 - 50237695
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacatta 68  Q
    |||||||||| ||||||| ||||| || ||||||||||  || ||| ||||||||||||||||||    
T  50237759 aaactattaagaaagattcagagattattgagttggatagaaatattgtatatgatagaacatta 50237695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 2133711 - 2133612
Alignment:
Q  30 aatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    ||||||||| |||||| ||| || |||||||||||| ||| |||| ||     ||||||  ||| |||||||||||| |||||||||||||| |||||||    
T  2133711 aatgagttgaatccaaatatagtttatgatagaacactatggcgtgatttgatccatgtactcgaccccacttagtgggataaggcttggttgttgttgt 2133612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 11284157 - 11284272
Alignment:
Q  16 aagatttagagaataatgagttggatccaactatggtatatgatagaacattatagc-----gtaatccatgtcgtcggccccacttagtgagataaggc 110  Q
    ||||| |||||| |||||||||||||  || ||||||||||||| ||||||||| ||      | |||||||| | |  |||| ||||||||||||||||    
T  11284157 aagatgtagagattaatgagttggatataaatatggtatatgattgaacattattgcatcgtttgatccatgtagccaaccccgcttagtgagataaggc 11284256  T
Q  111 ttggttattgttgtag 126  Q
    ||| || |||||||||    
T  11284257 ttgcttgttgttgtag 11284272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 38060897 - 38060996
Alignment:
Q  30 aatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||||||||| |||||| ||||||||||||  || |||||     |||||||| | || |||||||||||| ||||||  |||||| |||||||    
T  38060897 aatgagttggatccaaatatggtttatgatagaacaccatggcgtaatttgatccatgtagccgaccccacttagtgggataagaattggttgttgttgt 38060996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 55244453 - 55244500
Alignment:
Q  22 tagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||| |||||||||||||  || |||||||||||||||||||||||    
T  55244453 tagagattaatgagttggatagaaatatggtatatgatagaacattat 55244500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 35033303 - 35033373
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgt 74  Q
    |||| |||| |||||||||||||   |||||||||||||||| |||||| | |||||||||| ||| ||||    
T  35033303 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgt 35033373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 37779045 - 37779099
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||||||| ||||||| | ||||| | |||||| ||||||||||||||||    
T  37779045 aaagatttagagattaatgagctagatccgaatatggtttatgatagaacattat 37779099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 45486931 - 45486849
Alignment:
Q  47 tatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||| |||||||||||||||| || ||     |||||||| | ||||||||||||||| ||||| |||||||| |||||||    
T  45486931 tatggtttatgatagaacattatggcataatttgatccatgtagccggccccacttagtgggataaagcttggttgttgttgt 45486849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 19737141 - 19737206
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||  ||| ||||||||| ||||||||||||||  | |||||| ||||||| ||||||||    
T  19737141 aaactattaggaaatatttagagattaatgagttggatctcaatatggtttatgataaaacattat 19737206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Complemental strand, 23610969 - 23610932
Alignment:
Q  87 cggccccacttagtgagataaggcttggttattgttgt 124  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  23610969 cggccccacttagtgggataaggcttggttgttgttgt 23610932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 26490472 - 26490513
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaa 45  Q
    ||||||||| |||||||||||||| ||||||||| |||||||    
T  26490472 aaactattagaaaagatttagagactaatgagtttgatccaa 26490513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 29475843 - 29475916
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||| |||||| |||||| |||||||||||||  || ||| || |||||||||| | ||| |||||||    
T  29475843 aaactattaagaaagatctagagattaatgagttggattgaaatattgtttatgatagaaaactatggcgtaat 29475916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 125
Target Start/End: Complemental strand, 31566209 - 31566160
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgta 125  Q
    |||||||| | || |||||||||||| |||||||||||||| ||||||||    
T  31566209 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgta 31566160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 39208789 - 39208830
Alignment:
Q  28 ataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||| |||||||| |||||| ||||||||||||||||    
T  39208789 ataatgagtaggatccaaatatggtttatgatagaacattat 39208830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 46431804 - 46431767
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggat 41  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  46431804 aaactattaaaaaagatctagagattaatgagttggat 46431767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 27192471 - 27192507
Alignment:
Q  90 ccccacttagtgagataaggcttggttattgttgtag 126  Q
    |||||||||||| |||||||||||||| |||||||||    
T  27192471 ccccacttagtgggataaggcttggttgttgttgtag 27192507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 30294249 - 30294185
Alignment:
Q  1 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaaca 65  Q
    ||||||||||||||||||||||| ||   ||||||||||||| || |||| | ||||||| ||||    
T  30294249 gataaactattaaaaaagatttataggtcaatgagttggatctaagtatgatttatgataaaaca 30294185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 39512777 - 39512825
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  39512777 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 39512825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 50249611 - 50249659
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| |||| |||||||||||| |||| ||||||||| |||||||    
T  50249611 atccatgtagtcgaccccacttagtgggatacggcttggttgttgttgt 50249659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 40980053 - 40979927
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    ||||||||| |||||||||||||   |||||||||||||||| |||||| |||||||||||| ||| |||||     |||||||| | || |||||||||    
T  40980053 aaactattagaaaagatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccactta 40979954  T
Q  99 gtgagataaggcttggttattgttgta 125  Q
    ||| |||||||||||||| ||||||||    
T  40979953 gtgggataaggcttggttgttgttgta 40979927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 36101891 - 36101777
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataagg 109  Q
    ||||||||| ||| |||||||||||||| || |||||| ||||||||||||||||  ||||     |||||||| || | |||||||||||| |||||||    
T  36101891 aaagatttatagattaatgagttggatcaaaatatggtttatgatagaacattatgacgtaatttgatccatgtagttgaccccacttagtgggataagg 36101792  T
Q  110 cttggttattgttgt 124  Q
    ||||||| |||||||    
T  36101791 cttggttgttgttgt 36101777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 27648936 - 27649062
Alignment:
Q  3 taaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactt 97  Q
    ||||| |||| |||||||||||||   |||||||||||||||| | |||| |||||||||||| | | |||||     |||||||| | || ||||||||    
T  27648936 taaaccattagaaaagatttagaggtcaatgagttggatccaaatttggtttatgatagaacactgtggcgtaatttgatccatgtagccgaccccactt 27649035  T
Q  98 agtgagataaggcttggttattgttgt 124  Q
    |||| |||||||||||||| |||||||    
T  27649036 agtgggataaggcttggttgttgttgt 27649062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 28542069 - 28542007
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacat 66  Q
    |||||||||| ||||||||||||| |||||||||||||  ||||||||| |||||||||||||    
T  28542069 aaactattaagaaagatttagagattaatgagttggattgaactatggtttatgatagaacat 28542007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 28628058 - 28627936
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||  ||||||||||||| ||||||||||||| ||| | |||| |||||||||||||||| |||||     |||||||| | || | |||||||    
T  28628058 aaactattaggaaagatttagagattaatgagttggatgcaaatgtggtttatgatagaacattatggcgtaatttgatccatgtagccgactccactta 28627959  T
Q  99 gtgagataaggcttggttattgt 121  Q
    ||| |||||||||| ||| ||||    
T  28627958 gtgggataaggcttagttgttgt 28627936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 37976403 - 37976457
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  37976403 aaagatttagagattaatgagttggatccaaatatggtttatgatagaacattat 37976457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 38135338 - 38135265
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||||||||||||||||| |||||||||||| | || |||||  |||||||||| ||||| |||||||    
T  38135338 aaactattaaaaaagatttagagattaatgagttggaccgaaatatgggttatgatagaatattatggcgtaat 38135265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 1569174 - 1569246
Alignment:
Q  5 aactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    ||||||||| |||||| |||||| |||||||||||||| || |||||| |||||||||||||||  |||||||    
T  1569174 aactattaagaaagatctagagattaatgagttggatcaaaatatggtttatgatagaacattacggcgtaat 1569246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 9210814 - 9210704
Alignment:
Q  19 atttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttg 113  Q
    ||||||||  ||||||||||||||||| |||||| ||||||| |||||||| |||||     |||||||| |  | |||||||||||| ||||||||||     
T  9210814 atttagaggttaatgagttggatccaaatatggtttatgatacaacattatggcgtaatttgatccatgtagctgaccccacttagtgggataaggcttc 9210715  T
Q  114 gttattgttgt 124  Q
    ||| |||||||    
T  9210714 gttgttgttgt 9210704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 5577596 - 5577547
Alignment:
Q  20 tttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  5577596 tttagagactaatgagttggatccaagtatggtttatgatagaacattat 5577547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 11594117 - 11594242
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  11594117 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 11594216  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  11594217 gtgggataaggcttggttgttgttgt 11594242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 21517505 - 21517440
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||||||| ||||||||| |||| |||||||||||| |||| | ||||||| ||||||||    
T  21517505 aaactattaaaaaatatttagagattaataagttggatccaaatatgatttatgatataacattat 21517440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 27893688 - 27893563
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||| ||||||||||||| ||||||| |||| | || |||| | |||||||||||||||| || ||     || ||||| | || ||| |||||    
T  27893688 aaactattaagaaagatttagagattaatgagctggaccgaaatatgttttatgatagaacattatggcataatttgattcatgtagccgaccctactta 27893589  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  27893588 gtgcgataaggcttggttgttgttgt 27893563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 36239921 - 36239848
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||  ||| ||||||||| ||| ||||||||||||| |||| | |||||||||||||||| |||||||    
T  36239921 aaactattaggaaaaatttagagattaacgagttggatccaaatatgctttatgatagaacattatggcgtaat 36239848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 43281831 - 43281956
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| |||||||||||||   |||||||||||||||| |||||| | |||||||||| ||| |||     | |||||||| | || |||||||||    
T  43281831 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccactta 43281930  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| || ||||||||||| |||||||    
T  43281931 gtgggacaaggcttggttgttgttgt 43281956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 45836607 - 45836482
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| |||||| |||||||||||| ||| |||     | |||||||| | || |||||||||    
T  45836607 aaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 45836508  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| ||||||||| |||| |||||||    
T  45836507 gtgggataaggctcggttgttgttgt 45836482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 10 - 125
Target Start/End: Original strand, 33731997 - 33732115
Alignment:
Q  10 ttaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg---taatccatgtcgtcggccccacttagtgagata 106  Q
    |||| |||||| || ||| ||||||||  |||| || |||||| |||||||||||||||| ||    | |||||||| | ||| ||||||||||| ||||    
T  33731997 ttaagaaagatctaaagattaatgagtgagatcgaaatatggtttatgatagaacattatggcaatttgatccatgtagccggtcccacttagtgggata 33732096  T
Q  107 aggcttggttattgttgta 125  Q
    |||||||||| ||||||||    
T  33732097 aggcttggttgttgttgta 33732115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 2885821 - 2885722
Alignment:
Q  30 aatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    ||||||||||| |||| |||||| |||||||||||| ||| | |||     |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  2885821 aatgagttggacccaaatatggtttatgatagaacactatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 2885722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 124
Target Start/End: Complemental strand, 28208423 - 28208328
Alignment:
Q  34 agttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||||| |||||| |||||||||||| ||| |||| ||     |||||| | || |||||||||||| |||||||||||||| |||||||    
T  28208423 agttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28208328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 36136932 - 36136994
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||||   |||||| |||||||||| |||||| |||||||||||||||||| |||||    
T  36136932 aaagatttagatgttaatgaattggatccaaatatggtttatgatagaacattatagggtaat 36136994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 42969870 - 42969976
Alignment:
Q  19 atttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttg 113  Q
    ||||||||  ||||||||||||||||| |||||| |||||| ||||||||| |  ||     |||||||| | || |||||||||||| ||||||||||     
T  42969870 atttagaggttaatgagttggatccaaatatggtttatgattgaacattatcgtataatttgatccatgtagccgaccccacttagtgggataaggcttt 42969969  T
Q  114 gttattg 120  Q
    |||||||    
T  42969970 gttattg 42969976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 12841400 - 12841275
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   ||||||||| |||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  12841400 aaaccattagaaaggatttagaggtcaatgagttgtatccaaatttggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 12841301  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  12841300 gtgggataaggcttggttgttgttgt 12841275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 22349777 - 22349902
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||||||| |||||| ||   ||| |||||||||||| | ||||||||||||||| | ||| |||| ||     |||||| |||| |||||||||    
T  22349777 aaaccattaaaaaggatttaaaggtcaataagttggatccaaatttggtatatgatagaatactatggcgtcatttgatccatgtagtcgaccccactta 22349876  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| ||||||||||| || |||||||    
T  22349877 gtgggataaggcttgattgttgttgt 22349902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 29650541 - 29650666
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| |||||||||||||   |||||||| ||||||| |||||| | |||||||||| ||  |||| ||     |||||| | || |||||||||    
T  29650541 aaaccattagaaaagatttagaggtcaatgagtttgatccaaatatggtttttgatagaacactaaggcgtcatttgatccatgtagccgaccccactta 29650640  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  29650641 gtgggataaggcttggttgttgttgt 29650666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 32631721 - 32631846
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| |||||||||||||   |||||||||||||||| |||||| | |||||||||  ||| |||     | ||| |||| | || |||||||||    
T  32631721 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacgctatggcgtcatttgatctatgtagccgaccccactta 32631820  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  32631821 gtgggataaggcttggttgttgttgt 32631846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 35922410 - 35922475
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||| ||||||||||||  |||||||||| ||| || |||| | ||||||||||||||||    
T  35922410 aaactattaagaaagatttagaggttaatgagttgaatctaaatatgatttatgatagaacattat 35922475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 39906497 - 39906372
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   ||||| |||||||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  39906497 aaaccattagaaaggatttagaggtcaatgacttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 39906398  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  39906397 gtgggataaggcttggttgttgttgt 39906372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 74
Target Start/End: Original strand, 21078085 - 21078144
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgt 74  Q
    ||||||||||||   |||||||||||||||| | |||| |||||||||||||||| ||||    
T  21078085 aaagatttagaggtcaatgagttggatccaaatttggtgtatgatagaacattatggcgt 21078144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 24549813 - 24549754
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaa 63  Q
    |||||||||| |||||| |||||| |||||||||||||  || |||||||| ||||||||    
T  24549813 aaactattaagaaagatctagagattaatgagttggattgaaatatggtatttgatagaa 24549754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 5418223 - 5418288
Alignment:
Q  3 taaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||||| ||||||| ||||  |||||||||||| | || |||||| ||||||||||||||||    
T  5418223 taaactattaagaaagattaagagt-taatgagttggaccgaaatatggtttatgatagaacattat 5418288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 122
Target Start/End: Complemental strand, 46355904 - 46355858
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgtt 122  Q
    |||||||| | || ||||||||||||||||||||||||||| |||||    
T  46355904 atccatgtagccgaccccacttagtgagataaggcttggttgttgtt 46355858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 47848841 - 47848895
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||| | || ||||||| ||||||||| |||||| ||||||||||||||||    
T  47848841 aaagatttggggattaatgagctggatccaaatatggtttatgatagaacattat 47848895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 114
Target Start/End: Original strand, 47852269 - 47852359
Alignment:
Q  29 taatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttgg 114  Q
    ||||||||||||||||| | |||| ||| |||||||||||| |||||     |||||||| | || |||||||||| | ||||||||||||    
T  47852269 taatgagttggatccaaatgtggtgtatcatagaacattatggcgtaatttgatccatgtagccgaccccacttagggggataaggcttgg 47852359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 48919269 - 48919395
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||| ||||||| |||||| ||||||| | || ||| |||| ||     |||||| |||| |||||||||    
T  48919269 aaaccattagaaatgatttagaggtcaatgagtttgatccaaatatggtttatgataaaccactatggcgtcatttgatccatgtagtcgaccccactta 48919368  T
Q  99 gtgagataaggcttggttattgttgta 125  Q
     || |||||||||||||| ||||||||    
T  48919369 atgggataaggcttggttgttgttgta 48919395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 12966173 - 12966238
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||| ||| ||||||||| |||||| ||||||  || |||||||||||||| | ||||||    
T  12966173 aaactattaagaaatatttagagattaatgatttggatagaaatatggtatatgataaatcattat 12966238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 14057635 - 14057700
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||  ||||||||||||  ||||| ||| ||| ||| |||||| ||||||||||||||||    
T  14057635 aaactattaggaaagatttagaggttaatgcgttcgattcaaatatggtttatgatagaacattat 14057700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 14367663 - 14367728
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||  ||||||||||||  ||||| ||| ||| ||| |||||| ||||||||||||||||    
T  14367663 aaactattaggaaagatttagaggttaatgcgttcgattcaaatatggtttatgatagaacattat 14367728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 124
Target Start/End: Original strand, 20899416 - 20899453
Alignment:
Q  87 cggccccacttagtgagataaggcttggttattgttgt 124  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  20899416 cggccccacttagtgggataaggcttggttgttgttgt 20899453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 123
Target Start/End: Complemental strand, 30914536 - 30914503
Alignment:
Q  90 ccccacttagtgagataaggcttggttattgttg 123  Q
    |||||||||||| |||||||||||||||||||||    
T  30914536 ccccacttagtgggataaggcttggttattgttg 30914503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 31682727 - 31682602
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   ||||| |||||||||  | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  31682727 aaaccattagaaaggatttagaggtcaatgaattggatccatatttggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 31682628  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  31682627 gtgggataaggcttggttgttgttgt 31682602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 37618102 - 37618227
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   ||| |||||||||||| | |||| |||||||||||| ||| | || ||     |||||| | || |||||||||    
T  37618102 aaaccattagaaaggatttagaggtcaataagttggatccaaatttggtgtatgatagaacactatggtgtcatttgatccatgtagccgaccccactta 37618201  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  37618202 gtgggataaggcttggttgttgttgt 37618227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 39812172 - 39812217
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgt 121  Q
    |||||||| || |||||||||||||| |||||||||||||| ||||    
T  39812172 atccatgtagttggccccacttagtgggataaggcttggttgttgt 39812217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 45601633 - 45601694
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaaca 65  Q
    |||| ||||| |||||| |||||| |||||||||||||| || |||| | ||||||||||||    
T  45601633 aaaccattaagaaagatctagagattaatgagttggatcaaaatatgatttatgatagaaca 45601694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 77
Target Start/End: Complemental strand, 2882836 - 2882788
Alignment:
Q  29 taatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||||||| ||  ||||| |||||||||||||||| |||||||    
T  2882836 taatgagttggatcgaaacatggtttatgatagaacattatggcgtaat 2882788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 5418308 - 5418356
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| |||| ||||| |||||| |||||||||||||| |||||||    
T  5418308 atccatgtagtcgaccccatttagtgggataaggcttggttgttgttgt 5418356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 26742022 - 26741946
Alignment:
Q  1 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    ||||||||||||  ||| |||| || |  ||||||||||| | || |||||| |||||||||||||||| |||||||    
T  26742022 gataaactattaggaaatatttggaaataaatgagttggaccgaaatatggtttatgatagaacattatggcgtaat 26741946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 28562491 - 28562423
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatgg-tatatgatagaacattatag 71  Q
    |||||||||  ||||||||||||| ||| ||||||||||| | ||||| | ||||||| ||||||||||    
T  28562491 aaactattatgaaagatttagagattaacgagttggatcctaatatggttttatgatataacattatag 28562423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 31005439 - 31005487
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  31005439 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31005487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 31869150 - 31869102
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  31869150 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31869102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 32368459 - 32368407
Alignment:
Q  7 ctattaaaaaagatttagagaataatgagttggatccaactatggtatatgat 59  Q
    |||||||  |||||||||||| || ||||||||||| || |||||||||||||    
T  32368459 ctattaaggaagatttagagattagtgagttggatcgaaatatggtatatgat 32368407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 33103094 - 33103198
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataagg 109  Q
    ||||| ||||||| |||||||||| |||  | |||||| ||||||||||||  ||||||||     |||||||| | || |||||||||||  |||||||    
T  33103094 aaagacttagagattaatgagttgaatcggaatatggtttatgatagaacaccatagcgtaatttgatccatgtagccgaccccacttagtaggataagg 33103193  T
Q  110 cttgg 114  Q
    |||||    
T  33103194 cttgg 33103198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 35559118 - 35559050
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagc 72  Q
    |||| |||| |||||||||||||   |||||||||||||||| | | || |||| ||||||||||||||    
T  35559118 aaaccattagaaaagatttagaggtcaatgagttggatccaaatttagtttatggtagaacattatagc 35559050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 43491542 - 43491590
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  43491542 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 43491590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 490503 - 490617
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataagg 109  Q
    ||||||||||||| | ||||||||||||||| |||||| |||||||||||||||| |||||     |||||||| | || |||||||||||| |||||||    
T  490503 aaagatttagagattgatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagg 490602  T
Q  110 cttggttattgttgt 124  Q
    |||| || |||||||    
T  490603 cttgtttgttgttgt 490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 127
Target Start/End: Original strand, 29520820 - 29520934
Alignment:
Q  18 gatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggctt 112  Q
    |||||||||| ||||||||||||||||| |||||| |||||||||||||||| |||||     |||||||| | |  ||||| |||||| ||||| ||||    
T  29520820 gatttagagattaatgagttggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagcccaccccatttagtgggataatgctt 29520919  T
Q  113 ggttattgttgtagt 127  Q
    |||| ||||||||||    
T  29520920 ggttgttgttgtagt 29520934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 43904777 - 43904717
Alignment:
Q  17 agatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    ||||||||||| |||||||||||||| || |||||| |||||||||||||||| |||||||    
T  43904777 agatttagagattaatgagttggatctaaatatggtttatgatagaacattatggcgtaat 43904717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 45419416 - 45419520
Alignment:
Q  28 ataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttggttattgtt 122  Q
    |||||||||| ||||||| | |||| |||||||||||||||| | |||     |||||||| | || |||||||||||| |||||||||||||| |||||    
T  45419416 ataatgagtttgatccaaatttggtttatgatagaacattatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 45419515  T
Q  123 gtagt 127  Q
    |||||    
T  45419516 gtagt 45419520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 30559861 - 30559915
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||||||| ||||||||||||||||  |||||| ||||||||||||||||    
T  30559861 aaagatttagagattaatgagttggatccatatatggtttatgatagaacattat 30559915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 35914726 - 35914600
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||  ||||| ||  ||| |||||||||||| | || |||||| |||||||||||||||| |||||     |||||||| |  | |||||||||    
T  35914726 aaactattaggaaagacttgaagattaatgagttggaccaaaatatggtttatgatagaacattatggcgtaatttgatccatgtagctgaccccactta 35914627  T
Q  99 gtgagataaggcttggttattgttgta 125  Q
    |||||||||| ||||||| ||||||||    
T  35914626 gtgagataagacttggttgttgttgta 35914600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 2216456 - 2216568
Alignment:
Q  16 aagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggc 110  Q
    ||||||||||||  |||||||||||||| | |||| | |||||||||||||||||| |||||     |||||| | || ||||||| |||||||||||||    
T  2216456 aagatttagagatcaatgagttggatcctaatatgtt-tatgatagaacattatagtgtaatttgatccatgtagccgaccccactcagtgagataaggc 2216554  T
Q  111 ttggttattgttgt 124  Q
    |||||  |||||||    
T  2216555 ttggtggttgttgt 2216568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 11523848 - 11523723
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  11523848 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 11523749  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  11523748 gtgggataaggcttggttgttgttgt 11523723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 122
Target Start/End: Original strand, 16917352 - 16917462
Alignment:
Q  16 aagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg----taatccatgtcgtcggccccacttagtgagataaggct 111  Q
    |||||||||||| |||||||||||||  || |||||||||||||||||||||  |  |    | |||||||| | || |||||||||||| |||||| ||    
T  16917352 aagatttagagattaatgagttggatagaaatatggtatatgatagaacatttgactgcttttgatccatgtagccgtccccacttagtgggataagact 16917451  T
Q  112 tggttattgtt 122  Q
    |||||||||||    
T  16917452 tggttattgtt 16917462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 25473528 - 25473403
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||| ||||||| | |||| |||||||||||| |||||||| ||     |||||| | || |||||||||    
T  25473528 aaaccattagaaaggatttagaggtcaatgagtttgatccaaatttggtgtatgatagaacactatagcgtcatttgatccatgtagccgaccccactta 25473429  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  25473428 gtgggataaggcttggttgttgttgt 25473403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 31715992 - 31716104
Alignment:
Q  19 atttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgt--cgtcggccccacttagtgagataaggct 111  Q
    ||||||||| |||| |||||||||||| |||||| || ||||||||||||| |||||     ||||||||  ||||  | |||||||||| |||||||||    
T  31715992 atttagagattaattagttggatccaaatatggtttaagatagaacattatggcgtaatttgatccatgtagcgtcaccaccacttagtgggataaggct 31716091  T
Q  112 tggttattgttgt 124  Q
    ||||| |||||||    
T  31716092 tggttgttgttgt 31716104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 45041440 - 45041324
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||  ||||||||||||  ||||||||||||||||| |||||| ||||||||  |||||| |||||     |||||||| |  | |||||||||    
T  45041440 aaactattaggaaagatttagaggttaatgagttggatccaa-tatggtttatgatagcgcattatggcgtaatttgatccatgtagctgaccccactta 45041342  T
Q  99 gtgagataaggcttggtt 116  Q
    ||| ||||||||||||||    
T  45041341 gtgggataaggcttggtt 45041324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 17491779 - 17491708
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta 75  Q
    |||||||||| ||||| || |||| |||||||||||| | || |||||| |||||||||||||||| |||||    
T  17491779 aaactattaagaaagacttggagattaatgagttggaccaaaatatggtttatgatagaacattatggcgta 17491708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 23492202 - 23492316
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgt-----aatccatgtcgtcggccccacttagtgagataagg 109  Q
    |||||| ||| || |||||||||||||  || |||| |||||||||||||| ||| | ||     ||||||||| | || ||||||||||||||||||||    
T  23492202 aaagatgtagcgattaatgagttggatagaaatatgatatatgatagaacactatggtgtcatttaatccatgtagccgaccccacttagtgagataagg 23492301  T
Q  110 cttggttattgttgt 124  Q
    |||| || |||||||    
T  23492302 cttgtttgttgttgt 23492316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 44529395 - 44529509
Alignment:
Q  17 agatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggct 111  Q
    ||||||||||   |||||||||||||||| | |||| |||||||||||| ||| || | ||     |||||| | || |||||||||||| |||||||||    
T  44529395 agatttagaggtcaatgagttggatccaaatttggtttatgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggct 44529494  T
Q  112 tggttattgttgtag 126  Q
    ||||| |||||||||    
T  44529495 tggttgttgttgtag 44529509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 5908803 - 5908928
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||||||||||  |  || |||||||||||||| || |||| | ||||||||||| |||| |||||     |||||||| || || |||| |||    
T  5908803 aaactattaaaaaagatccaaggattaatgagttggatcaaaatatgatttatgatagaaccttattgcgtaattggatccatgtagttggacccaatta 5908902  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    |||  ||||||||||||| |||||||    
T  5908903 gtggaataaggcttggttgttgttgt 5908928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 33827882 - 33827821
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaaca 65  Q
    |||||||||||||| ||||| ||| |||||| ||||||| || |||||| ||||||||||||    
T  33827882 aaactattaaaaaatatttatagattaatgaattggatctaaatatggtttatgatagaaca 33827821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 65
Target Start/End: Complemental strand, 35643727 - 35643670
Alignment:
Q  8 tattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaaca 65  Q
    |||||| |||||| |||||| |||||||||||||| || |||||| ||||||||||||    
T  35643727 tattaagaaagatctagagattaatgagttggatcgaaatatggtttatgatagaaca 35643670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 36069759 - 36069832
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||| ||| ||||||||| ||||||||||| |  || |||||| |||||||||||||||  |||||||    
T  36069759 aaactattaacaaatatttagagattaatgagttgggtagaaatatggtttatgatagaacattacggcgtaat 36069832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 36545306 - 36545431
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| |||  ||| ||     |||||| | || |||||||||    
T  36545306 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatgacgtcatttgatccatgtagccgaccccactta 36545405  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  36545406 gtgggataaggcttggttgttgttgt 36545431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 38392018 - 38391945
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||| ||||| |||||| || ||| |||||||| ||||| || ||||||||||||||||| ||||| |||||||    
T  38392018 aaaccattaagaaagatctacagattaatgagtgggatcgaaatatggtatatgatagaatattatggcgtaat 38391945  T

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Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 42469852 - 42469727
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| |||||||||||||   |||||||||||||||| |||||| | |||||||||| ||| |||     | |||||||| |  | |||||||||    
T  42469852 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagctgaccccactta 42469753  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
     || |||||||||||||| |||||||    
T  42469752 ttgggataaggcttggttgttgttgt 42469727  T

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Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 16705904 - 16705978
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatat-gatagaacattatagcgtaat 77  Q
    |||||||||| ||| |  |||||| |||||||||||||| || |||||||||| ||| ||||||||| |||||||    
T  16705904 aaactattaagaaaaagctagagattaatgagttggatcgaaatatggtatatggatggaacattatggcgtaat 16705978  T

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Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 35825584 - 35825522
Alignment:
Q  1 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaa 63  Q
    |||||||||||| |||||||||||||| |||||||||| | | || ||| || ||||||||||    
T  35825584 gataaactattagaaaagatttagagactaatgagttgaaccaaaatattgtttatgatagaa 35825522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 9905007 - 9904942
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||| ||||||||||| | |||||| ||||||| || || ||| ||||||| ||||||||    
T  9905007 aaactattaataaagatttagaaattaatgatttggatcaaaataaggtttatgataaaacattat 9904942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 12966434 - 12966381
Alignment:
Q  9 attaaaaaagatttagagaataatgagttggatccaactatggtatatgataga 62  Q
    ||||| ||||||||||||| |||||||||| || ||| |||||| |||||||||    
T  12966434 attaagaaagatttagagattaatgagttgaattcaaatatggtttatgataga 12966381  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 27037789 - 27037862
Alignment:
Q  1 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgt 74  Q
    ||||||||||||  |||||| || ||| |||||||||||||  || |||||||| |||||||| ||||| ||||    
T  27037789 gataaactattaggaaagatataaagattaatgagttggatagaaatatggtatttgatagaatattatggcgt 27037862  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 28169549 - 28169614
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||  |||||||| |||| ||||||||||||| ||| |||||| ||||||| || |||||    
T  28169549 aaactattaggaaagattttgagattaatgagttggattcaaatatggtttatgataaaatattat 28169614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 35362775 - 35362702
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||  |||||||| || | ||||||||||||   || |||||| |||||||||||||||| |||||||    
T  35362775 aaactattaggaaagatttggaaattaatgagttggactgaaatatggtgtatgatagaacattatggcgtaat 35362702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 41971915 - 41971850
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||| ||| ||||||||||||| ||||||||||||   || ||| || ||||||||||||||||    
T  41971915 aaactactaagaaagatttagagattaatgagttggactgaaatattgtttatgatagaacattat 41971850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 1928659 - 1928587
Alignment:
Q  57 gatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    ||||||||||||| |||||     |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  1928659 gatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 1928587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 14742130 - 14742082
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  14742130 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 14742082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 42584541 - 42584581
Alignment:
Q  29 taatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||| |||||||||| |||||| ||||||||||||||||    
T  42584541 taatgatttggatccaaatatggtttatgatagaacattat 42584581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 41560401 - 41560511
Alignment:
Q  19 atttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttg 113  Q
    ||||||||| ||||||||||||||||| |||||  |||||||||||||||| |||||     |||||||| | || |||||||||||| |||||||||||    
T  41560401 atttagagattaatgagttggatccaaatatgggttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttg 41560500  T
Q  114 gttattgttgt 124  Q
    ||| |||||||    
T  41560501 gttgttgttgt 41560511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 11941702 - 11941580
Alignment:
Q  7 ctattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtg 101  Q
    |||||| |||||||||||||| || |||||||||||  | |||||| ||||||| |||||||| |||||     |||||||| ||||||| |||||||||    
T  11941702 ctattagaaaagatttagagattattgagttggatcggagtatggtttatgataaaacattatggcgtattttgatccatgtagtcggcctcacttagtg 11941603  T
Q  102 agataaggcttggttattgttgt 124  Q
     |||| ||||||||| |||||||    
T  11941602 ggatacggcttggttgttgttgt 11941580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 29128940 - 29129065
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat------ccatgtcgtcggccccactt 97  Q
    |||||||||  ||||||||||||  |||  |||||||||||| |||||| |||||||||||||||| | |||||      |||||| | || ||||||||    
T  29128940 aaactattaggaaagatttagaggttaacaagttggatccaaatatggtttatgatagaacattatggtgtaatatgatcccatgtagccgaccccactt 29129039  T
Q  98 agtgagataaggcttggttattgttg 123  Q
    ||||||||||||||||||| ||||||    
T  29129040 agtgagataaggcttggtttttgttg 29129065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 8796366 - 8796491
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||||||||| |||||| |||| | |||||| ||||||  || |||||| |||||||||||||||| |||     |||||||||| | || |||||||||    
T  8796366 aaactattaagaaagatctagatattaatgacttggattgaaatatggtttatgatagaacattatggcgtaatttaatccatgtagccgaccccactta 8796465  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  8796466 gtgggataaggcttggttgttgttgt 8796491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 36624009 - 36623897
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagc-gta---atccatgtcgtcggccccacttag 99  Q
    ||||||||| |||||||||||||  ||||||||||||||||| |||||| || ||| ||||||||| || |||   |||||||| |||| ||| ||||||    
T  36624009 aaactattagaaaagatttagaggctaatgagttggatccaaatatggtttaggatcgaacattatggctgtaatgatccatgtagtcgaccctacttag 36623910  T
Q  100 tgagataaggctt 112  Q
    || ||||||||||    
T  36623909 tgggataaggctt 36623897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 129
Target Start/End: Complemental strand, 38807796 - 38807666
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaa-----tccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   || ||||||||||||| |||||| |||||||||||| ||| ||||||     ||||||| | || |||||||||    
T  38807796 aaaccattagaaaggatttagaggtcaacgagttggatccaaatatggtttatgatagaacactatggcgtaatttgttccatgtagccgaccccactta 38807697  T
Q  99 gtgagataaggcttggttattgttgtagtgt 129  Q
    ||| |||||||||||||| ||||||| ||||    
T  38807696 gtgggataaggcttggttgttgttgttgtgt 38807666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 4707331 - 4707221
Alignment:
Q  18 gatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat----ccatgtcgtcggccccacttagtgagataaggcttg 113  Q
    |||||||||  ||||||||||||||||| | |||| |||||||||||| ||| |||||||     ||||| | || |||||||||||| |||||||||||    
T  4707331 gatttagaggttaatgagttggatccaaatttggtttatgatagaacactatggcgtaatttgatcatgtagccgaccccacttagtgggataaggcttg 4707232  T
Q  114 gttattgttgt 124  Q
    ||| |||||||    
T  4707231 gttgttgttgt 4707221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 25979356 - 25979231
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| |||||| |||||||||||| ||| |||     | |||||||| | || |||||||||    
T  25979356 aaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 25979257  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  25979256 gtgggataaggcttggttgttgttgt 25979231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 19908144 - 19908046
Alignment:
Q  20 tttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttg 113  Q
    |||||||| ||||||||||||| ||| |||||| |||||| ||||||||| |||||     |||||||| | || |||||||||||| |||||||||||    
T  19908144 tttagagattaatgagttggattcaaatatggtttatgattgaacattattgcgtaattttatccatgtagccgaccccacttagtgggataaggcttg 19908046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 125
Target Start/End: Complemental strand, 49347518 - 49347392
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  49347518 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 49347419  T
Q  99 gtgagataaggcttggttattgttgta 125  Q
    ||| |||||||||||||| ||||||||    
T  49347418 gtgggataaggcttggttgttgttgta 49347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 52532741 - 52532619
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||  ||||||||||| | |||||||||||| | || |||||| |||||||||||||||| |||||     || ||||| | || |||||||||    
T  52532741 aaactattaggaaagatttagaaattaatgagttggaacaaaatatggtttatgatagaacattatggcgtaatttgattcatgtagccgaccccactta 52532642  T
Q  99 gtgagataaggcttggttattgt 121  Q
    ||| || ||||||||||| ||||    
T  52532641 gtgggaaaaggcttggttgttgt 52532619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 52921237 - 52921363
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   ||||| |||||||||| |||||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  52921237 aaaccattagaaaggatttagaggtcaatgaattggatccaaatatggtttatgatagaacactattgcgtcatttgatccatgtagccgaccccactta 52921336  T
Q  99 gtgagataaggcttggttattgttgta 125  Q
    ||| |||||||||||||| ||||||||    
T  52921337 gtgggataaggcttggttgttgttgta 52921363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 1210902 - 1211027
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  1210902 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 1211001  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  1211002 gtgggataaggcttggttgttgttgt 1211027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 27520332 - 27520267
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||| |||| ||||||||| ||||||| ||||||||| |||| | ||||||||||||||||    
T  27520332 aaactattagaaaaaatttagagattaatgagctggatccaaatatgatttatgatagaacattat 27520267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 30202255 - 30202130
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  30202255 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 30202156  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  30202155 gtgggataaggcttggttgttgttgt 30202130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 37311880 - 37311755
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| |||||||||||||   |||||||||||||||| |||||| | |||||||||| ||| |||     | |||||||| | || |||||||||    
T  37311880 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccactta 37311781  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| || ||||||||||| |||||||    
T  37311780 gtgggaaaaggcttggttgttgttgt 37311755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 40416528 - 40416593
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||| |||||| || ||| |||||||||||||| || |||||| ||||||||||||||||    
T  40416528 aaactattaagaaagatctatagattaatgagttggatcgaaatatggtttatgatagaacattat 40416593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 52561703 - 52561590
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccacttagtgagataagg 109  Q
    ||||||||||||  ||||||||||||||||| |||||| |  | ||||||||||| |||     | |||||||| | || |||||||||||| |||||||    
T  52561703 aaagatttagaggttaatgagttggatccaaatatggtttcgggtagaacattatggcgaaatttgatccatgtagccgaccccacttagtgggataagg 52561604  T
Q  110 cttggttattgttg 123  Q
    ||||||| ||||||    
T  52561603 cttggttgttgttg 52561590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 10200429 - 10200369
Alignment:
Q  6 actattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacat 66  Q
    ||||||| ||||||||||||||   ||||||||||||||| |||||| |||||||||||||    
T  10200429 actattagaaaagatttagagatcgatgagttggatccaaatatggtttatgatagaacat 10200369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 28090786 - 28090694
Alignment:
Q  37 tggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    ||||||||| |||||| |||||||||||||||| |||||     |||||||| | || |||||||||||| |||||| ||||||| |||||||    
T  28090786 tggatccaaatatggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgt 28090694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 43375722 - 43375658
Alignment:
Q  5 aactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||| ||||||||||||| |||||||||||| | || ||||||  |||||||||||||||    
T  43375722 aactattaagaaagatttagagattaatgagttggaccgaaatatggttcatgatagaacattat 43375658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 29577269 - 29577203
Alignment:
Q  2 ataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||||| |||||| |||||| ||||||| |||||| || |||||| ||||||||||||||||    
T  29577269 ataaactattaagaaagatctagagattaatgagctggatcaaaatatggt-tatgatagaacattat 29577203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 121
Target Start/End: Original strand, 42501269 - 42501387
Alignment:
Q  8 tattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccacttagtga 102  Q
    |||||| |||||| || ||| |||||||||||||  || ||||| |||||||||||||||| ||||     |||||||||| | || ||| ||||||||     
T  42501269 tattaagaaagatctatagattaatgagttggatagaaatatggaatatgatagaacattacagcgtcgtttaatccatgtagccgaccctacttagtgg 42501368  T
Q  103 gataaggcttggttattgt 121  Q
    ||||| | |||||||||||    
T  42501369 gataaagtttggttattgt 42501387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 3818981 - 3818916
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||| ||||||||||||| |||||||||| ||  || |||||| |||||| |||||||||    
T  3818981 aaactattaagaaagatttagagattaatgagttgaatagaaatatggtttatgatggaacattat 3818916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 7762562 - 7762497
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||| ||||||||||||   |||||||||||||| || |||||| ||| ||||||||||||    
T  7762562 aaactattagaaaagatttagatgttaatgagttggatctaaatatggtttataatagaacattat 7762497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 32404651 - 32404527
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||  ||||||||||||| |||||||||  ||||||  ||||| ||||||| ||||| || |||||     |||||||| | || |||||||||    
T  32404651 aaactattaggaaagatttagagattaatgagttaaatccaaacatggtttatgatataacataatggcgtaatttgatccatgtagccgaccccactta 32404552  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||| ||||| |||||||    
T  32404551 gtgggataaggc-tggttgttgttgt 32404527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 37462986 - 37462878
Alignment:
Q  18 gatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggctt 112  Q
    |||||||||  ||||||||| |||| || |||||| ||| |||||||||||| |||||||     |||||| | || |||||||||||| ||||||||||    
T  37462986 gatttagaggttaatgagtttgatcaaa-tatggtttatcatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataaggctt 37462888  T
Q  113 ggttattgtt 122  Q
    |||| |||||    
T  37462887 ggttgttgtt 37462878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 39318286 - 39318359
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||| |||| ||| |||||||||   |||||||||||||||| |||||| |||||||||||| ||| |||||||    
T  39318286 aaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatggcgtaat 39318359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 77
Target Start/End: Complemental strand, 52878420 - 52878351
Alignment:
Q  8 tattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    ||||| |||||||||||||  |||||||||| ||||||||| | | ||||||||||| |||||| |||||    
T  52878420 tattataaaagatttagaggttaatgagttgaatccaactacgatttatgatagaactttatagtgtaat 52878351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 4001580 - 4001520
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaac 64  Q
    |||| ||||||||||||||||||   |||||||||||||||| |||||| | |||||||||    
T  4001580 aaaccattaaaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaac 4001520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 6025764 - 6025824
Alignment:
Q  6 actattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacat 66  Q
    |||| |||||||||| |||||| |||||||||||||  || |||||||| |||||||||||    
T  6025764 actagtaaaaaagatctagagattaatgagttggatagaaatatggtatctgatagaacat 6025824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 8676990 - 8676954
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttgga 40  Q
    |||||||||||||||||||||||| ||||||||||||    
T  8676990 aaactattaaaaaagatttagagattaatgagttgga 8676954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 9509472 - 9509548
Alignment:
Q  1 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    ||||||||||||  ||||||||| ||  ||||||||| || |||| |||||| |||||| ||||||||| |||||||    
T  9509472 gataaactattaggaaagatttacagcctaatgagttagagccaaatatggtttatgattgaacattatggcgtaat 9509548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 6084150 - 6084205
Alignment:
Q  22 tagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||| |||||||||||||| || |||||| |||||||||||| ||| |||||||    
T  6084150 tagagattaatgagttggatcaaaatatggtttatgatagaacaatatggcgtaat 6084205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 13827687 - 13827640
Alignment:
Q  22 tagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||| |||||||||||||  || |||||||||||||||||||||||    
T  13827687 tagagattaatgagttggatagaaatatggtatatgatagaacattat 13827640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 21769793 - 21769710
Alignment:
Q  47 tatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgta 125  Q
    |||||| | |||||||||||||| |||||||     |||||| | || |||||||||||| |||||||||||||| ||||||||    
T  21769793 tatggtttgtgatagaacattatggcgtaatttgatccatgtagccgaccccacttagtgtgataaggcttggttgttgttgta 21769710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 25715432 - 25715325
Alignment:
Q  23 agagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggtta 117  Q
    ||||| |||||||||| | | || |||||| |||||||||| ||||| |||||||     |||||| | || || ||||||||| ||||||||||||||     
T  25715432 agagattaatgagttgaaccgaaatatggtttatgatagaatattatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttggttg 25715333  T
Q  118 ttgttgta 125  Q
    ||||||||    
T  25715332 ttgttgta 25715325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 8672075 - 8672145
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgt 74  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||||||||    
T  8672075 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatagcgt 8672145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 10569196 - 10569130
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattata 70  Q
    |||||||||| |||||| |||||| |||| || |||||  || ||| ||||||||||||||||||||    
T  10569196 aaactattaagaaagatctagagattaataagctggatagaaatatcgtatatgatagaacattata 10569130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 39140672 - 39140794
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||  ||| ||||||||  |||| |||||||||||| |||||| |  ||||||||||||| |||||     || ||||| | || |||||||||    
T  39140672 aaactattaggaaaaatttagaggttaattagttggatccaaatatggtttcagatagaacattatggcgtaatttgattcatgtagccgaccccactta 39140771  T
Q  99 gtgagataaggcttggttattgt 121  Q
    ||| ||||| |||||||| ||||    
T  39140772 gtgggataatgcttggttgttgt 39140794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 990583 - 990518
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||| | | |||| |||||| |||||||||||||| |  |||||| ||||||||||||||||    
T  990583 aaactattgagatagatctagagattaatgagttggatcaacatatggtttatgatagaacattat 990518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 9599519 - 9599446
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||  ||| ||||||||  ||||||||| ||||||  |||||| ||||||||||| |||| |||||||    
T  9599519 aaactattaggaaatatttagagtttaatgagtttgatccagatatggtttatgatagaacgttatggcgtaat 9599446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 19936617 - 19936690
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||  |||||||||||   ||||||||| ||||||| ||||||  ||||||||||||||  |||||||    
T  19936617 aaactattaggaaagatttagatgttaatgagttagatccaaatatggttaatgatagaacattacggcgtaat 19936690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 37099811 - 37099762
Alignment:
Q  75 aatccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    ||||||||| | ||||||||||| ||| || |||||||||||||||||||    
T  37099811 aatccatgtagccggccccacttggtgggaaaaggcttggttattgttgt 37099762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 124
Target Start/End: Complemental strand, 37430453 - 37430420
Alignment:
Q  91 cccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||||||||||||||||||| |||||||    
T  37430453 cccacttagtgagataaggcttggttgttgttgt 37430420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 40568509 - 40568408
Alignment:
Q  30 aatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    ||||||||||| | || |||||| |||||||||| | ||| |||||||     |||||| | |  |||||||||||| |||||||||||||| |||||||    
T  40568509 aatgagttggaccaaaatatggtttatgatagaaaactatggcgtaatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgttgt 40568410  T
Q  125 ag 126  Q
    ||    
T  40568409 ag 40568408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 40920642 - 40920589
Alignment:
Q  16 aagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||| |||||| |||||||||||||  || ||||||||||||||||| |||||    
T  40920642 aagatctagagattaatgagttggatagaaatatggtatatgatagaatattat 40920589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 44941865 - 44941776
Alignment:
Q  40 atccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||| | |||| |||||||||||| ||| |||||||     |||||| | || |||||||||||| |||||||||||||| |||||||    
T  44941865 atccaaatttggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 44941776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 50771587 - 50771554
Alignment:
Q  92 ccacttagtgagataaggcttggttattgttgta 125  Q
    ||||||||||||||||||||||||| ||||||||    
T  50771587 ccacttagtgagataaggcttggttgttgttgta 50771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 4590657 - 4590533
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||| ||||||||| ||| | |||||||||||  |  |||| ||| |||||||||| ||| | |||     |||||||| | || |||||||||    
T  4590657 aaactattaagaaagatttatagattgatgagttggatagatatatgatatgtgatagaacaatatggtgtaatttgatccatgtagccgaccccactta 4590558  T
Q  99 gtgagataaggcttggttattgttg 123  Q
    ||| ||||||| |||||| ||||||    
T  4590557 gtgggataaggtttggttgttgttg 4590533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 8203259 - 8203223
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttgga 40  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  8203259 aaactattaaaaaagatctagagattaatgagttgga 8203223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 29577486 - 29577534
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  29577486 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 29577534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 42539260 - 42539212
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| || |||||||||||||||||||    
T  42539260 atccatgtagacgaccccacttagtgggaaaaggcttggttattgttgt 42539212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 43481846 - 43481798
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  43481846 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 43481798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 364
Target Start/End: Complemental strand, 36767060 - 36766951
Alignment:
Q  255 acagatggacaaagcttctgttcttggagaagctataaggtacttaaagcaaatggaagagaaagtgagtgttcttgaggaggaacagaaaaggaagaaa 354  Q
    |||||||||||||| | ||||||||||||| ||||| | |||||| ||| || || ||||||| ||||  |||||||||||||||||||| | |||||||    
T  36767060 acagatggacaaagttactgttcttggagatgctatcaagtacttgaagaaattgcaagagaaggtgaaggttcttgaggaggaacagaacatgaagaaa 36766961  T
Q  355 actgtggaat 364  Q
    |  |||||||    
T  36766960 aacgtggaat 36766951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 124
Target Start/End: Original strand, 55007907 - 55008028
Alignment:
Q  8 tattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtga 102  Q
    |||||| ||||||||||||| |||||||||||| | || |||||| ||||||||| ||||||  ||||     |||||||| | || ||||||||||||     
T  55007907 tattaagaaagatttagagattaatgagttggaccgaaatatggtttatgatagatcattatgacgtaatttgatccatgtagccgaccccacttagtgg 55008006  T
Q  103 gataaggcttggttattgttgt 124  Q
    |||||||||||||| |||||||    
T  55008007 gataaggcttggttgttgttgt 55008028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 26037630 - 26037506
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||  ||||||||||||   |||||||||||||||| |||||| |||||||||||| ||| |||||     |||||||| | || |||||||||    
T  26037630 aaactattaggaaagatttagaggtgaatgagttggatccaaatatggtttatgatagaacactatggcgtaattggatccatgtagccgaccccactta 26037531  T
Q  99 gtgagataaggcttggttattgttg 123  Q
    ||| ||||||| |||||| ||||||    
T  26037530 gtgggataaggtttggttgttgttg 26037506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 31959939 - 31959814
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    ||||||||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||     | |||||||| | || |||||||||    
T  31959939 aaactattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 31959840  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  31959839 gtgggataaggcttggttgttgttgt 31959814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 34208378 - 34208269
Alignment:
Q  20 tttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccacttagtgagataaggcttgg 114  Q
    |||||||| ||||||||||||||||| |||||| |||||||||||||||| |||     | ||||||||  ||| |||| |||| || ||||||||||||    
T  34208378 tttagagattaatgagttggatccaaatatggtttatgatagaacattatggcgcaatttgatccatgtactcgaccccccttattgggataaggcttgg 34208279  T
Q  115 ttattgttgt 124  Q
    || |||||||    
T  34208278 ttgttgttgt 34208269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 48622663 - 48622542
Alignment:
Q  9 attaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgt-----aatccatgtcgtcggccccacttagtgag 103  Q
    |||| |||||||||||||   |||||||| ||||||| | |||| |||||||||||| ||| ||||     ||||||||| | || |||||||||||| |    
T  48622663 attagaaaagatttagaggtcaatgagtttgatccaaatttggtgtatgatagaacactatggcgtcatttaatccatgtagccgaccccacttagtggg 48622564  T
Q  104 ataaggcttggttattgttgta 125  Q
    ||||||||||||| ||||||||    
T  48622563 ataaggcttggttgttgttgta 48622542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 25574982 - 25575106
Alignment:
Q  5 aactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttag 99  Q
    ||||||||| |||||| |||||| |||||||||||||| || |||||| |||||||||||||| | | |||     |||||||| |  | ||||| ||||    
T  25574982 aactattaagaaagatctagagattaatgagttggatcgaaatatggtttatgatagaacattgtggtgtaatttgatccatgtagcagaccccatttag 25575081  T
Q  100 tgagataaggcttggttattgttgt 124  Q
    || |||||||||||||| |||||||    
T  25575082 tgggataaggcttggttgttgttgt 25575106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 26024975 - 26024851
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||| |||||| |||||| |||||||||||||| |   ||||| |||||||||||||||| | |||     |||||||| | || || ||||||    
T  26024975 aaactattaagaaagatctagagattaatgagttggatcgagacatggtttatgatagaacattatggtgtaattttatccatgtagccgacctcactta 26024876  T
Q  99 gtgagataaggcttggttattgttg 123  Q
    ||| |||||||||||||| ||||||    
T  26024875 gtgggataaggcttggttgttgttg 26024851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 27049301 - 27049229
Alignment:
Q  5 aactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    ||||||||| ||||||||| ||| ||||||||||| ||||| |||||| |||||| ||||||||| |||||||    
T  27049301 aactattaagaaagatttatagattaatgagttggttccaaatatggtttatgatcgaacattatggcgtaat 27049229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 122
Target Start/End: Complemental strand, 55388333 - 55388213
Alignment:
Q  7 ctattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtg 101  Q
    ||||||| |||||||| |||| ||||||||| |||| || |||| | |||||||||||||| | | |||||     |||||| |||| ||||||||||||    
T  55388333 ctattaagaaagatttggagattaatgagttagatcgaaatatgatttatgatagaacattgtggtgtaatttgatccatgttgtcgaccccacttagtg 55388234  T
Q  102 agataaggcttggttattgtt 122  Q
     |||||||||||||| |||||    
T  55388233 ggataaggcttggttgttgtt 55388213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 39100635 - 39100536
Alignment:
Q  30 aatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||||||||| ||| || ||| |||||||||||| |||||||     |||||| | || |||||||||||| |||||||||||||| |||||||    
T  39100635 aatgagttggatccaaatattgtttatcatagaacattatggcgtaatataatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 39100536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 307
Target Start/End: Original strand, 54980307 - 54980362
Alignment:
Q  252 catacagatggacaaagcttctgttcttggagaagctataaggtacttaaagcaaa 307  Q
    |||||| ||||| |||||||||||||||||||||| |||||||||||| |||||||    
T  54980307 catacaaatggataaagcttctgttcttggagaagatataaggtacttgaagcaaa 54980362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 31459151 - 31459273
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||||||||  ||||||||||||| ||||||||||||||| | |||||| | |||| ||||||||| |||     | ||||||||   || |||||||||    
T  31459151 aaactattaggaaagatttagagattaatgagttggatcccaatatggtgtgtgattgaacattatggcggaacttgatccatgtacccgaccccactta 31459250  T
Q  99 gtgagataaggcttggttattgt 121  Q
    ||| |||||||||||||| ||||    
T  31459251 gtgggataaggcttggttgttgt 31459273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 1777142 - 1777017
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| |||||||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||     | |||||||| | || |||||||||    
T  1777142 aaaccattagaaaagatttagaggtcaatgagttggatccaaatttggtgtatgatagaacagtatggcgtcatttgatccatgtagccgaccccactta 1777043  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
     || |||||||||||||| |||||||    
T  1777042 atgggataaggcttggttgttgttgt 1777017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 30621326 - 30621261
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||| ||||||||||||| ||||| |||||| | || |||||| ||||||||||||||||    
T  30621326 aaactattaagaaagatttagagattaatgtgttggaccgaaatatggtttatgatagaacattat 30621261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 31043229 - 31043290
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaaca 65  Q
    |||||||||  ||||||||||||| ||||||||||||||||| |||||| | ||||||||||    
T  31043229 aaactattaggaaagatttagagattaatgagttggatccaaatatggtttgtgatagaaca 31043290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 35690428 - 35690553
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||  ||| ||||||||  ||||||||| |||||||  | ||| |||||||||||||||| |||||     |||||||| | || |||||||||    
T  35690428 aaactattacgaaaaatttagaggttaatgagtttgatccaatcagggtttatgatagaacattatggcgtaatttgatccatgtagccgaccccactta 35690527  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||| ||||||| |||||||    
T  35690528 gtgggataagacttggtttttgttgt 35690553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 37488248 - 37488373
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||||||||| |||||| |||| | |||| |||| |||| || ||||||  |||||||| |||||| |||||||     |||||| | | ||||||||||    
T  37488248 aaactattaagaaagatctagaaattaataagtttgatcaaaatatggttaatgatagagcattatggcgtaatttgatccatgtagccagccccactta 37488347  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  37488348 gtgggataaggcttggttgttgttgt 37488373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 39708590 - 39708707
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| |||||| |||||||||||| |||  ||||     |||||||| |||| |||||||||    
T  39708590 aaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacactatgtcgtaatttgatccatgtagtcgaccccactta 39708689  T
Q  99 gtgagataaggcttggtt 116  Q
    ||| |||||| |||||||    
T  39708690 gtgggataagacttggtt 39708707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 52569640 - 52569515
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  52569640 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 52569541  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  52569540 gtgggataaggcttggttgttgttgt 52569515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 56439696 - 56439623
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||  |||||||| || | |||| ||||||||| || |||||| ||||||||||||||||||||||||    
T  56439696 aaactattatgaaagatttggaaattaattagttggatcgaaatatggtttatgatagaacattatagcgtaat 56439623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 45204964 - 45204900
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacatta 68  Q
    |||||||||  ||||||||||||  |||| |||||||||||| |||||| |||||||||||||||    
T  45204964 aaactattaggaaagatttagagtttaataagttggatccaaatatggtttatgatagaacatta 45204900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 47265294 - 47265195
Alignment:
Q  30 aatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||||||||| | || | |||||||||||| ||||| |||||     |||||| | || || ||||||||| ||||||||||||||||||||||    
T  47265294 aatgagttggatccaaatttgatctatgatagaacactatagtgtaatttgatccatgtagccgacctcacttagtgggataaggcttggttattgttgt 47265195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 42639145 - 42639075
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgt 74  Q
    |||||||||| |||||| ||| || |||||||||||||  || |||||||| |||||||||||||| ||||    
T  42639145 aaactattaagaaagatctagcgattaatgagttggatagaaatatggtatttgatagaacattatggcgt 42639075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 53518437 - 53518375
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    ||||||||||||  |||||||||||||| || |||||| |||||||||||| ||| |||||||    
T  53518437 aaagatttagaggttaatgagttggatctaaatatggtttatgatagaacactatggcgtaat 53518375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 8286596 - 8286721
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| |||  ||| ||     |||||| | || |||||||||    
T  8286596 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtttatgatagaacactatgacgtcatttgatccatgtagccgcccccactta 8286695  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  8286696 gtgggataaggcttggttgttgttgt 8286721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 21528445 - 21528570
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| |||||||||||||   |||||||||||| ||| |||||| | |||||||||| ||| | |     | |||||||| | || |||||||||    
T  21528445 aaaccattagaaaagatttagaggtcaatgagttggattcaaatatggtttttgatagaacactatggtggcatttgatccatgtagccgaccccactta 21528544  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  21528545 gtgggataaggcttggttgttgttgt 21528570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 49987565 - 49987638
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||| ||||| || ||||  |||||| ||||||||||||||||  |||||||| |||||| |||||||    
T  49987565 aaactattaagaaagacttggagataaatgagatggatccaactatggttcatgatagagcattatggcgtaat 49987638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 51421887 - 51421952
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||  ||||||||||||  |||||| ||||||||||  ||||| ||||||||||||||||    
T  51421887 aaactattaggaaagatttagaggttaatgaattggatccaaaaatggtttatgatagaacattat 51421952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 55768624 - 55768555
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg 73  Q
    ||||| |||| ||||| ||| |||  ||||||||||||| || |||||| ||||||||||||||||||||    
T  55768624 aaactgttaagaaagaattaaagatcaatgagttggatcaaagtatggtgtatgatagaacattatagcg 55768555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 55832880 - 55832811
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg 73  Q
    ||||| |||| ||||| ||| |||  ||||||||||||| || |||||| ||||||||||||||||||||    
T  55832880 aaactgttaagaaagaattaaagatcaatgagttggatcaaagtatggtgtatgatagaacattatagcg 55832811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 26510558 - 26510610
Alignment:
Q  17 agatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||||| ||||||||||||||||| |||||| |  |||||||||||||    
T  26510558 agatttagagattaatgagttggatccaaatatggtttgcgatagaacattat 26510610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 77
Target Start/End: Original strand, 5306471 - 5306526
Alignment:
Q  22 tagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||| ||||||||||||||||| |||||| ||||| | |||||||| |||||||    
T  5306471 tagagattaatgagttggatccaaatatggtttatgacataacattatggcgtaat 5306526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 31339699 - 31339746
Alignment:
Q  22 tagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||| |||||||||||||| || ||||||| |||||||||||||||    
T  31339699 tagagattaatgagttggatcgaaatatggtacatgatagaacattat 31339746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 21237015 - 21237085
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgt 74  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | ||||||||||||||||| ||| ||||    
T  21237015 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtatatgatagaacactatggcgt 21237085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 37042789 - 37042667
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||||||||| |||||| |||||| || ||||||||||  || || ||||| |||||||||||||| | |     | |||||||| | || ||| |||||    
T  37042789 aaactattaagaaagatctagagattattgagttggatagaaatacggtatttgatagaacattatggtgtcgtttgatccatgtagccgacccgactta 37042690  T
Q  99 gtgagataaggcttggttattgt 121  Q
    ||| |||||||||||||| ||||    
T  37042689 gtgggataaggcttggttgttgt 37042667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 41192229 - 41192283
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||| |||||| |||||||||||||  || ||||||||||| |||||||||||    
T  41192229 aaagatctagagattaatgagttggatagaaatatggtatatggtagaacattat 41192283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 47147530 - 47147593
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||| |||||| |||||| |||||||||||||  |  |||| ||||||||||||||||||    
T  47147530 aaactattaagaaagatctagagattaatgagttggat--agatatgatatatgatagaacattat 47147593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 21107149 - 21107214
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||  |||| ||||| || |||| |||||||||||| |||||| ||||||||||| ||||    
T  21107149 aaactattaggaaagttttagtgattaattagttggatccaaatatggtttatgatagaactttat 21107214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 34233149 - 34233076
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||| | |||||  |||||| ||||||||| |||| || || ||| |||||||||||||| |||||||||    
T  34233149 aaactattcataaagacctagagattaatgagttagatcaaaataaggtttatgatagaacattgtagcgtaat 34233076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 40420337 - 40420275
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacatta 68  Q
    |||||||||||||| ||  ||||| |||||||||| |||| | |||||| |||||||||||||||    
T  40420337 aaactattaaaaaaaat--agagattaatgagttgaatcctaatatggtttatgatagaacatta 40420275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 41729549 - 41729504
Alignment:
Q  30 aatgagttggatccaactatggtatatgatagaacattatagcgta 75  Q
    |||||||||||||||| |||||| |||||||||||| ||| |||||    
T  41729549 aatgagttggatccaaatatggtttatgatagaacactatggcgta 41729504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 47372808 - 47372873
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||| ||| ||||||  ||||| |||||||||||||  || |||||||||| ||||||||||||    
T  47372808 aaactactaataaagatccagagattaatgagttggatagaaatatggtatattatagaacattat 47372873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 124
Target Start/End: Complemental strand, 48451106 - 48451073
Alignment:
Q  91 cccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||||||||||||||||||| |||||||    
T  48451106 cccacttagtgagataaggcttggttgttgttgt 48451073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 56130403 - 56130452
Alignment:
Q  75 aatccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    ||||||||| | || |||||||||||| |||||||||||||| |||||||    
T  56130403 aatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 56130452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 436463 - 436511
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  436463 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 436511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 30634154 - 30634106
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  30634154 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 30634106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 43434158 - 43434206
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| ||||  ||||||||||| |||||||||||||| |||||||    
T  43434158 atccatgtagtcgagcccacttagtgggataaggcttggttgttgttgt 43434206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 44384988 - 44385052
Alignment:
Q  5 aactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||| |||||| |||||| |||| ||||||||   | |||||| ||||||||||||||||    
T  44384988 aactattaagaaagatctagagattaataagttggatattaatatggtttatgatagaacattat 44385052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 45209253 - 45209205
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  45209253 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 45209205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 46153942 - 46153990
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  46153942 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 46153990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 50238663 - 50238615
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  50238663 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 50238615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 50238749 - 50238701
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  50238749 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 50238701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 53540444 - 53540512
Alignment:
Q  1 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||||||  ||||| || |||| ||||||||||||   || |||||| ||||||||||||||||    
T  53540444 gataaactattaggaaagacttggagattaatgagttggacaaaaatatggtttatgatagaacattat 53540512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 418148 - 418086
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    ||||||||||||| ||||||||||||||||| | |||| |||||||||||||||| |||||||    
T  418148 aaagatttagagattaatgagttggatccaaatgtggtttatgatagaacattatggcgtaat 418086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 13561511 - 13561386
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| |||||||||||||   ||||||||||||||||||||||| | |||||||||| ||| |||     | |||||||| | || |||||||||    
T  13561511 aaaccattagaaaagatttagaggtcaatgagttggatccaactatggtttttgatagaacactatggcgtcatttgatccatgtagccgaccccactta 13561412  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| ||||||||||| || |||||||    
T  13561411 gtgggataaggcttgtttgttgttgt 13561386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 3302001 - 3302127
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| |||||||||||||   |||||||||||||||| |||||| | |||||||||| ||  |||     | |||||||| | || |||||||||    
T  3302001 aaaccattataaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactacggcgtcatttgatccatgtagccgaccccactta 3302100  T
Q  99 gtgagataaggcttggttattgttgta 125  Q
    ||| |||||||||||||| ||||||||    
T  3302101 gtgggataaggcttggttgttgttgta 3302127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 11675686 - 11675812
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatcc-aactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactt 97  Q
    |||||||||  | ||||||||||| |||||||||||||   || |||||| |||||||||||||||| |||||     |||||||| | || ||||||||    
T  11675686 aaactattaggacagatttagagattaatgagttggattttaaatatggtttatgatagaacattatggcgtagtttaatccatgtagccgaccccactt 11675785  T
Q  98 agtgagataaggcttggttattgttgt 124  Q
    |||  |||||||||||||| |||||||    
T  11675786 agttggataaggcttggttgttgttgt 11675812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 14667939 - 14667993
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||| |||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  14667939 aaagatctagagattaatgagttggatccaagtatggtttatgatagaacattat 14667993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 2915620 - 2915496
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  2915620 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggt-tatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 2915522  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| ||||||||||||||||||||||    
T  2915521 gtgggataaggcttggttattgttgt 2915496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 9235204 - 9235269
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||| |||||| |||||| ||||||| |||||| || |||||| ||||||||||||||||    
T  9235204 aaactattaagaaagatatagagattaatgagctggatcgaaatatggtttatgatagaacattat 9235269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 29816539 - 29816664
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| | || |||||||||    
T  29816539 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagccgaccccactta 29816638  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  29816639 gtgggataaggcttggttgttgttgt 29816664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 38685124 - 38685241
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| |||||| |||||||||||| ||| |||     | |||||||| | || |||||||||    
T  38685124 aaaccattagaaaggatttagaggtcaatgagttggatccaaatatggtttatgatagaacaatatggcgtcatttgatccatgtagccgaccccactta 38685223  T
Q  99 gtgagataaggcttggtt 116  Q
    ||| ||||||||||||||    
T  38685224 gtgggataaggcttggtt 38685241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 12576988 - 12576920
Alignment:
Q  1 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||||||| |||||| |||||| |||||||||| ||  || |||||||||||||||| ||||||    
T  12576988 gataaactattaagaaagatctagagattaatgagttgaatagaaatatggtatatgatagaccattat 12576920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 17340560 - 17340496
Alignment:
Q  5 aactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    ||||||||| ||||||||||||  ||||||||| ||||||| |||||| ||||||| ||||||||    
T  17340560 aactattaagaaagatttagaggttaatgagtttgatccaaatatggtttatgatataacattat 17340496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 18855798 - 18855889
Alignment:
Q  38 ggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| |||||| ||||||||||||||||||| ||     |||||||| | || |||||||||||| |||||| ||||||| |||||||    
T  18855798 ggatccaaatatggtttatgatagaacattatagcataatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgt 18855889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 120
Target Start/End: Complemental strand, 1287704 - 1287583
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaa-----tccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||| ||| ||| |||| |     ||||||| | || |||||||||    
T  1287704 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagtacactatggcgtcagttgatccatgtagccgaccccactta 1287605  T
Q  99 gtgagataaggcttggttattg 120  Q
    ||| ||||||||||||||||||    
T  1287604 gtgggataaggcttggttattg 1287583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 4496541 - 4496666
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| || | ||     |||||| | || |||||||||    
T  4496541 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcatcatttgatccatgtagccgaccccactta 4496640  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  4496641 gtgggataaggcttggttgttgttgt 4496666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 6889150 - 6889223
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||  ||||||||||||| |||| ||||||  | || |||||| |||||||||||||||| |||||||    
T  6889150 aaactattaggaaagatttagagattaattagttgggccaaaatatggtttatgatagaacattatggcgtaat 6889223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 43557947 - 43557830
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataagg 109  Q
    |||||||| |||| || ||||||||||| || |||||| ||||||||||||||||  | ||     ||| |||| | || |||||||||||| |||||||    
T  43557947 aaagatttggagattattgagttggatcgaaatatggtttatgatagaacattatgacttaagttgatctatgtagccgaccccacttagtgggataagg 43557848  T
Q  110 cttggttattgttgtagt 127  Q
    | ||||| ||||||||||    
T  43557847 cctggttgttgttgtagt 43557830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 14725672 - 14725736
Alignment:
Q  1 gataaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaaca 65  Q
    |||||||||||| |||||||||| ||  |||||||||||||| || |||||| |||||| |||||    
T  14725672 gataaactattataaaagatttaaaggttaatgagttggatcaaaatatggtttatgatcgaaca 14725736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 124
Target Start/End: Complemental strand, 32442225 - 32442126
Alignment:
Q  29 taatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttg 123  Q
    ||||||||||||||||| |||||| |  ||||||||||||| |||||||     |||||| | || | |||||||||| |||||| ||||||||||||||    
T  32442225 taatgagttggatccaaatatggttttggatagaacattatggcgtaatttgatccatgtagccgactccacttagtgggataag-cttggttattgttg 32442127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 36551380 - 36551428
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || ||||||||||||||||||||||||||| |||||||    
T  36551380 atccatgtagccgaccccacttagtgagataaggcttggttgttgttgt 36551428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 5558324 - 5558415
Alignment:
Q  30 aatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataaggcttggtt 116  Q
    ||||||| |||||||| |||||| |||||||||||| ||| || ||     |||||||| | || |||||||||||| ||||||||||||||    
T  5558324 aatgagtaggatccaaatatggtttatgatagaacactatggcataatttgatccatgtagccgaccccacttagtgggataaggcttggtt 5558415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 38132543 - 38132618
Alignment:
Q  54 tatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||||||||| |||||||     |||||| | || |||||||||||| |||||||||||||| |||||||    
T  38132543 tatgatagaacattatggcgtaatttgatccatgtggccgaccccacttagtgggataaggcttggttgttgttgt 38132618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 41894234 - 41894277
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatga 58  Q
    ||||||||||||| ||||||||||||||||| |||||| |||||    
T  41894234 aaagatttagagattaatgagttggatccaaatatggtttatga 41894277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 5303601 - 5303729
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaa--ctatggtatatgatagaacattatagcg------taatccatgtcgtcggccccac 95  Q
    |||||||| ||||||||||||||  |||||||||||||  ||   ||||||||||||||||| ||||| |||      |||||||||| | ||  |||||    
T  5303601 aaactattgaaaaagatttagagtttaatgagttggatagaaatatatggtatatgatagaatattatggcgttgttttaatccatgtagccgatcccac 5303700  T
Q  96 ttagtgagataaggcttggttattgttgt 124  Q
    |||||| |||||| | ||||| |||||||    
T  5303701 ttagtgggataagtcctggttgttgttgt 5303729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 124
Target Start/End: Complemental strand, 9460862 - 9460828
Alignment:
Q  90 ccccacttagtgagataaggcttggttattgttgt 124  Q
    ||||||||||| |||||||||||||||||||||||    
T  9460862 ccccacttagtaagataaggcttggttattgttgt 9460828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 23980101 - 23980162
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaaca 65  Q
    |||||||| | || |||||| ||| |||||||||||||| || |||||| ||||||||||||    
T  23980101 aaactattgagaatgatttatagattaatgagttggatctaaatatggtttatgatagaaca 23980162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 28186900 - 28186863
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggat 41  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  28186900 aaactattaagaaagatttagagattaatgagttggat 28186863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 35615440 - 35615505
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||| | ||| ||||||||| |||||||||||||  || ||| || ||||||||||||||||    
T  35615440 aaactattcataaaaatttagagattaatgagttggataaaaatatagtttatgatagaacattat 35615505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 408542 - 408494
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  408542 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 408494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 2645224 - 2645272
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | |||||| |||||||| |||||||||||||| |||||||    
T  2645224 atccatgtagccggccctacttagtgggataaggcttggttgttgttgt 2645272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 32489294 - 32489330
Alignment:
Q  90 ccccacttagtgagataaggcttggttattgttgtag 126  Q
    |||||||||||| |||||||||||||| |||||||||    
T  32489294 ccccacttagtgggataaggcttggttgttgttgtag 32489330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 36200886 - 36200934
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggt 52  Q
    ||||||||| ||||||| |||||  ||||||||||||||||| ||||||    
T  36200886 aaactattataaaagatatagaggttaatgagttggatccaaatatggt 36200934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 38830504 - 38830601
Alignment:
Q  31 atgagttggatccaactatggtatatgatagaacattatagcgtaat----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||| | || |||| | ||||||||||||||||||||||||    |||||| |  | |||||||||||| || |||| |||||| |||||||    
T  38830504 atgagttggaccgaaatatgatgtatgatagaacattatagcgtaattgatccatgtagctgaccccacttagtgggaaaaggtttggttgttgttgt 38830601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 12890758 - 12890857
Alignment:
Q  30 aatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| ||||||| |||||| |||||||||||| ||| |||||||     |||||| | || |||||||||||| |||||||||||||| |||||||    
T  12890758 aatgagttagatccaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 12890857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 34630 - 34505
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||| ||||| |||||| || ||| |||||||||||||  || |||||| |||||||||||||||| |||||     |||||||| |  | |||||||||    
T  34630 aaaccattaagaaagatctaaagattaatgagttggattgaaatatggtttatgatagaacattatggcgtaatttgatccatgtagctgaccccactta 34531  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||| ||||||| |||||||    
T  34530 gtgggataagacttggttgttgttgt 34505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 9593833 - 9593768
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||  ||||| ||||||| ||||||||||||||| | |||||| ||||||||||||||||    
T  9593833 aaactattaggaaagacttagagattaatgagttggatcccaatatggtttatgatagaacattat 9593768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 34143890 - 34143765
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| |||| |||||||||    
T  34143890 aaaccattacaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagtcgaccccactta 34143791  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
     || |||||||||||||| |||||||    
T  34143790 ttgggataaggcttggttgttgttgt 34143765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 34156506 - 34156381
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||| ||     |||||| |||| |||||||||    
T  34156506 aaaccattacaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagtcgaccccactta 34156407  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
     || |||||||||||||| |||||||    
T  34156406 ttgggataaggcttggttgttgttgt 34156381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 9706941 - 9707053
Alignment:
Q  18 gatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggctt 112  Q
    |||||||||  ||||||||||||||||| |||||| | |||||||||| ||| || | ||     |||||| | || |||||||||||| ||||||||||    
T  9706941 gatttagaggttaatgagttggatccaaatatggtttttgatagaacactatggcatcatttgatccatgtagccgaccccacttagtgggataaggctt 9707040  T
Q  113 ggttattgttgta 125  Q
    |||| ||||||||    
T  9707041 ggttgttgttgta 9707053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 124
Target Start/End: Complemental strand, 3206574 - 3206459
Alignment:
Q  14 aaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataag 108  Q
    |||||||||||||   |||||||||||||||| |||||| | | |||||||| ||| |||| ||     |||||| | || |||||||||||| ||||||    
T  3206574 aaaagatttagaggtcaatgagttggatccaaatatggtttttaatagaacactatggcgtcatttgatccatgtagccgaccccacttagtgggataag 3206475  T
Q  109 gcttggttattgttgt 124  Q
     |||||||||||||||    
T  3206474 acttggttattgttgt 3206459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 5096002 - 5096117
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccacttagtgagataagg 109  Q
    |||||||||| |  |||||||||||||| || |||||| |||||||||||||||| |||||     ||| |||| | ||  ||||||||||| |||||||    
T  5096002 aaagatttagtggttaatgagttggatcaaaatatggtttatgatagaacattatggcgtaatttgatctatgtagccgatcccacttagtgggataagg 5096101  T
Q  110 cttggttattgttgta 125  Q
     |||||| ||||||||    
T  5096102 tttggttgttgttgta 5096117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 31818688 - 31818814
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgta-----atccatgtcgtcggccccactta 98  Q
    |||||||||  |||| ||| |||| |||||||||||||| || |||||| ||||||||||||||||  ||||     |||||||| | || |||||||||    
T  31818688 aaactattaggaaaggtttggagattaatgagttggatcaaagtatggtttatgatagaacattatgtcgtaatttgatccatgtagccgaccccactta 31818787  T
Q  99 gtgagataaggcttggttattgttgta 125  Q
    | | || || |||||||| ||||||||    
T  31818788 gcgggaaaaagcttggttgttgttgta 31818814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 14389286 - 14389213
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    ||||| |||| ||||||||||||| |||| |||| ||||||| |||||| ||||||| |||||||  |||||||    
T  14389286 aaactcttaagaaagatttagagattaataagttagatccaaatatggtttatgatataacattagggcgtaat 14389213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 24665968 - 24666033
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||| ||| ||||||||   ||||||||||||| || |||||| ||||||||||||||||    
T  24665968 aaactattaagaaatatttagaggtcaatgagttggatcgaaatatggtttatgatagaacattat 24666033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 28085533 - 28085658
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   |||||||||||||||| | |||| |||||||||||| ||| | || ||     |||||| | || |||||||||    
T  28085533 aaaccattagaaaggatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggtgtcatttgatccatgtagccgaccccactta 28085632  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  28085633 gtgggataaggcttggttgttgttgt 28085658  T

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Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 34934929 - 34934828
Alignment:
Q  30 aatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||||||||||| | |||| |||||||||||| ||| || | ||     |||||| | || |||||||||||| |||||||||||||| |||||||    
T  34934929 aatgagttggatccaaatttggtgtatgatagaacactatggcctcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 34934830  T
Q  125 ag 126  Q
    ||    
T  34934829 ag 34934828  T

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Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 1748070 - 1748006
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacatta 68  Q
    |||||| ||| ||| ||||||||| |||||||||||||  || ||| ||||||||||||||||||    
T  1748070 aaactactaagaaaaatttagagattaatgagttggatagaaatatagtatatgatagaacatta 1748006  T

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Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 5897615 - 5897679
Alignment:
Q  5 aactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||| |||||||||||| | ||||| |||||||| || ||||||||||| ||||| |||||    
T  5897615 aactattagaaaagatttagatattaatgtgttggatcaaaatatggtatatggtagaatattat 5897679  T

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Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 43177 - 43119
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgataga 62  Q
    |||||||||| |||||| |||||| |||||||||||||| || ||| || |||||||||    
T  43177 aaactattaataaagatctagagagtaatgagttggatcaaaatatagtttatgataga 43119  T

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Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 30031413 - 30031535
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat-----ccatgtcgtcggccccactta 98  Q
    |||| |||| ||| |||||||||   ||||||||||||  || |||||| |||||||||||| ||| |||||||     |||||| | || || ||||||    
T  30031413 aaacaattagaaaggatttagaggtcaatgagttggatttaaatatggtttatgatagaacactatggcgtaatttgatccatgtagccgacctcactta 30031512  T
Q  99 gtgagataaggcttggttattgt 121  Q
    ||| |||||||||||||| ||||    
T  30031513 gtgggataaggcttggttgttgt 30031535  T

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Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 32756078 - 32756148
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgt 74  Q
    |||| |||| |||||||||||||   |||||||||||||||| | |||| |||||||||||| ||| ||||    
T  32756078 aaaccattagaaaagatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgt 32756148  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 8364713 - 8364786
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||| ||||||||||| | |||| |||||||   ||  ||||| |||||||||||||||| |||||||    
T  8364713 aaactattaagaaagatttagaaattaataagttggactgaaacatggtttatgatagaacattatggcgtaat 8364786  T

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Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 9568872 - 9568929
Alignment:
Q  20 tttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||| || |||||||||||||| |||||| ||||||||| | |||| |||||||    
T  9568872 tttagagattattgagttggatccaaatatggtttatgatagaccgttatggcgtaat 9568929  T

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Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 10099019 - 10098958
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaaca 65  Q
    |||| ||||||||||||||||||   ||||||||||||  || |||||| ||||||||||||    
T  10099019 aaaccattaaaaaagatttagaggtcaatgagttggatttaaatatggtgtatgatagaaca 10098958  T

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Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 6055896 - 6055832
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacatta 68  Q
    |||||||||  ||||||||||||  ||||||||| ||||||| ||| || ||| |||||||||||    
T  6055896 aaactattatgaaagatttagaggttaatgagttagatccaaatatagtgtataatagaacatta 6055832  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 12133950 - 12133902
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || ||||||||||||||| ||||||||||| |||||||    
T  12133950 atccatgtagccgaccccacttagtgagaaaaggcttggttgttgttgt 12133902  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 18238270 - 18238210
Alignment:
Q  4 aaactattaaa-aaagatttagagaataatgagttggatccaactatggtatatgatagaa 63  Q
    ||||||||||| ||||||||| ||| |||||||||||||  || |||| ||||||||||||    
T  18238270 aaactattaaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 18238210  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 20864835 - 20864867
Alignment:
Q  90 ccccacttagtgagataaggcttggttattgtt 122  Q
    ||||||||||||||||||||||||||| |||||    
T  20864835 ccccacttagtgagataaggcttggttgttgtt 20864867  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 31831984 - 31831920
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatgg-tatatgatagaacatt 67  Q
    |||||||||| |||||| |||||| || ||||||||||||||  |||| | ||||||||||||||    
T  31831984 aaactattaagaaagatctagagattactgagttggatccaaacatggttttatgatagaacatt 31831920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 33730199 - 33730247
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  33730199 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 33730247  T

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Target: scaffold0570 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 1073 - 948
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| ||||||||||||||||||   |||||||||||||||| | |||| |||||||||||| ||| |||     | |||||||| |  | ||||| |||    
T  1073 aaaccattaaaaaagatttagaggtcaatgagttggatccaaatttggtgtatgatagaacactatggcgtcatttgatccatgtagctgaccccattta 974  T
Q  99 gtgagataaggcttggttattgttgt 124  Q
    ||| |||||||||||||| |||||||    
T  973 gtgggataaggcttggttgttgttgt 948  T

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Target: scaffold0041 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 16735 - 16861
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcg-----taatccatgtcgtcggccccactta 98  Q
    |||| |||| |||||||||||||   |||||||||||||||| |||||| | |||||||||| ||| |||     | ||| |||| | || | |||||||    
T  16735 aaaccattagaaaagatttagaggtcaatgagttggatccaaatatggtttttgatagaacactatggcgtcatttgatctatgtagccgactccactta 16834  T
Q  99 gtgagataaggcttggttattgttgta 125  Q
    ||| |||||||||||||| ||||||||    
T  16835 gtgggataaggcttggttgttgttgta 16861  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 25569 - 25503
Alignment:
Q  4 aaactattaaaaaa-gatttagagaataatgagttggatccaactatggtatatgatagaacattat 69  Q
    |||||||||||||| |||||||||| |||||||||||||  || || | ||||||||| ||||||||    
T  25569 aaactattaaaaaatgatttagagattaatgagttggatagaaataagttatatgataaaacattat 25503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 39487 - 39549
Alignment:
Q  15 aaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||||   ||||||||||||||||| | |||| ||||||||||||| || |||||||    
T  39487 aaagatttagatggtaatgagttggatccaaatgtggtttatgatagaacatgatggcgtaat 39549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 17696 - 17733
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggat 41  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  17696 aaactattaaaaaagatttagagattaatgggttggat 17733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 160449 - 160376
Alignment:
Q  4 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaacattatagcgtaat 77  Q
    |||||||||  ||||||| ||| | ||||||||| || | || |||||| |||||||||||||||| |||||||    
T  160449 aaactattaggaaagattaagaaattaatgagttcgaccgaaatatggtttatgatagaacattatggcgtaat 160376  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 28937 - 28889
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  28937 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 28889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 31702 - 31750
Alignment:
Q  76 atccatgtcgtcggccccacttagtgagataaggcttggttattgttgt 124  Q
    |||||||| | || |||||||||||| |||||||||||||| |||||||    
T  31702 atccatgtagccgaccccacttagtgggataaggcttggttgttgttgt 31750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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