View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19773_high_53 (Length: 307)
Name: NF19773_high_53
Description: NF19773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19773_high_53 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 58 - 291
Target Start/End: Complemental strand, 6476583 - 6476350
Alignment:
| Q |
58 |
agaccagaggatgatataaggcactggactaagtttcaatcttttggtcccctattggtaacaatctcaccttggtatcatgtgtaagatagattcatcc |
157 |
Q |
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| T |
6476583 |
agaccagaggatgatataaggcactggactaagtttcaatcttttggtcccctattggtaacaatctcaccttggtatcatgtgtaagataggttcatcc |
6476484 |
T |
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| Q |
158 |
ccagatgtaatgtttctaatgcatttcatttttccagagccaagtagaggtagatggtggcaagtctgtggacctaagcaactatccttacatattcatg |
257 |
Q |
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| T |
6476483 |
ctagatgtaatgtttctaatgcatttcatttttccagagccaagtagaggtagatggtggcaagtctgtggacctaagcaactatccttacatattcatg |
6476384 |
T |
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| Q |
258 |
gtaaattgattttcaccaatacaaaacttaaaat |
291 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
6476383 |
gtaaattgattttcaccaatacaaaacttaaaat |
6476350 |
T |
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