View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19773_high_81 (Length: 236)
Name: NF19773_high_81
Description: NF19773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19773_high_81 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 39558257 - 39558477
Alignment:
| Q |
1 |
cgcatgactggaattttggtgaagattgttgcttggctcttggagtgtcgaataattggagcttttctattgtatatattgaagggaaataatcttattc |
100 |
Q |
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| T |
39558257 |
cgcatgactggaattttggtgaagattgtcgcttggctcttggagtgtcgaataattggagcttttctattgtatatattgaagggaaataatcttattc |
39558356 |
T |
|
| Q |
101 |
ataaggtatgctcttgttctatagtcacttgcattctattttcatgaaattgtgttctgattcaagaacaaattttcaccttgctttcgcacttcccata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
39558357 |
ataaggtatgctcttgttctatagtcacttgcattctattttcatgaaattgtgttctgattcaagaacaaattttcaccttgctttcgcacttcccata |
39558456 |
T |
|
| Q |
201 |
tgtttctacaacaactttttg |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
39558457 |
tgtttctacaacaactttttg |
39558477 |
T |
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