View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19773_low_69 (Length: 268)

Name: NF19773_low_69
Description: NF19773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19773_low_69
NF19773_low_69
[»] chr2 (13 HSPs)
chr2 (14-268)||(19243503-19243757)
chr2 (85-146)||(15370240-15370301)
chr2 (101-159)||(32615997-32616055)
chr2 (134-199)||(14209240-14209305)
chr2 (91-155)||(22878181-22878245)
chr2 (161-199)||(2416276-2416314)
chr2 (81-155)||(15120266-15120340)
chr2 (91-144)||(13866972-13867025)
chr2 (78-155)||(30331835-30331911)
chr2 (101-146)||(43199927-43199972)
chr2 (101-145)||(17443541-17443585)
chr2 (93-153)||(25800594-25800654)
chr2 (101-145)||(42852635-42852679)
[»] chr1 (17 HSPs)
chr1 (91-159)||(4549464-4549532)
chr1 (77-144)||(24460310-24460377)
chr1 (78-159)||(5157151-5157232)
chr1 (79-159)||(23373224-23373304)
chr1 (94-155)||(27807198-27807259)
chr1 (91-146)||(6292584-6292639)
chr1 (85-155)||(32515358-32515428)
chr1 (101-139)||(44815236-44815274)
chr1 (162-230)||(46499924-46499991)
chr1 (92-143)||(5924108-5924159)
chr1 (83-146)||(33723297-33723360)
chr1 (101-155)||(9507314-9507368)
chr1 (76-113)||(19605215-19605252)
chr1 (86-159)||(33976257-33976330)
chr1 (81-145)||(3597194-3597258)
chr1 (94-154)||(12564425-12564485)
chr1 (111-155)||(41638251-41638295)
[»] chr8 (15 HSPs)
chr8 (78-140)||(43368610-43368672)
chr8 (78-153)||(14926892-14926967)
chr8 (102-155)||(24326114-24326167)
chr8 (86-145)||(37353090-37353149)
chr8 (85-156)||(38602410-38602480)
chr8 (89-144)||(43208077-43208132)
chr8 (161-219)||(4558742-4558799)
chr8 (161-199)||(42237491-42237529)
chr8 (83-144)||(778483-778544)
chr8 (102-155)||(8535989-8536042)
chr8 (110-155)||(26410363-26410408)
chr8 (161-198)||(35374442-35374479)
chr8 (101-145)||(2364393-2364437)
chr8 (91-155)||(2487931-2487995)
chr8 (91-168)||(12361262-12361341)
[»] chr7 (16 HSPs)
chr7 (79-159)||(1418498-1418578)
chr7 (91-159)||(30751598-30751666)
chr7 (80-143)||(29363603-29363666)
chr7 (101-159)||(48157053-48157111)
chr7 (91-170)||(5620075-5620154)
chr7 (91-146)||(9210914-9210968)
chr7 (95-169)||(31002808-31002882)
chr7 (101-155)||(36598289-36598343)
chr7 (101-155)||(43854974-43855028)
chr7 (91-128)||(2727281-2727318)
chr7 (161-210)||(48157189-48157237)
chr7 (91-151)||(8427100-8427160)
chr7 (91-155)||(22387819-22387883)
chr7 (86-142)||(28691754-28691810)
chr7 (91-143)||(31751682-31751734)
chr7 (101-153)||(37064147-37064199)
[»] chr4 (16 HSPs)
chr4 (93-155)||(18628478-18628540)
chr4 (82-146)||(15173217-15173280)
chr4 (161-199)||(51630074-51630112)
chr4 (91-159)||(1017107-1017175)
chr4 (94-158)||(2811551-2811615)
chr4 (91-155)||(46860001-46860065)
chr4 (86-145)||(50298608-50298667)
chr4 (93-168)||(54277248-54277323)
chr4 (101-155)||(2996656-2996710)
chr4 (91-144)||(1312935-1312988)
chr4 (91-168)||(25896854-25896931)
chr4 (101-144)||(2236915-2236956)
chr4 (111-155)||(22471357-22471401)
chr4 (86-126)||(27043748-27043788)
chr4 (91-159)||(41097180-41097247)
chr4 (85-155)||(53943689-53943756)
[»] chr6 (13 HSPs)
chr6 (101-154)||(32171551-32171604)
chr6 (101-168)||(32848529-32848596)
chr6 (89-155)||(33067241-33067307)
chr6 (101-168)||(8420130-8420197)
chr6 (172-226)||(31624195-31624248)
chr6 (86-128)||(33068520-33068562)
chr6 (173-210)||(2112153-2112190)
chr6 (95-144)||(3180996-3181045)
chr6 (161-218)||(9093625-9093681)
chr6 (86-155)||(24333021-24333090)
chr6 (110-155)||(26177246-26177291)
chr6 (101-157)||(24973960-24974016)
chr6 (78-146)||(35070377-35070445)
[»] chr5 (11 HSPs)
chr5 (161-219)||(41819556-41819613)
chr5 (86-131)||(34205348-34205393)
chr5 (85-125)||(17369316-17369356)
chr5 (78-157)||(4855776-4855855)
chr5 (163-230)||(9202819-9202885)
chr5 (85-168)||(28586683-28586766)
chr5 (163-221)||(7674590-7674647)
chr5 (93-155)||(10303879-10303941)
chr5 (101-155)||(15015927-15015980)
chr5 (86-167)||(42181003-42181084)
chr5 (86-146)||(31208564-31208624)
[»] chr3 (12 HSPs)
chr3 (91-145)||(21872218-21872272)
chr3 (162-219)||(42808923-42808979)
chr3 (94-155)||(45590734-45590795)
chr3 (79-126)||(16072952-16072999)
chr3 (101-144)||(22667497-22667540)
chr3 (101-144)||(22724136-22724179)
chr3 (161-219)||(32703082-32703139)
chr3 (165-218)||(15304420-15304472)
chr3 (162-219)||(42809245-42809301)
chr3 (91-127)||(2081006-2081042)
chr3 (91-155)||(20194956-20195020)
chr3 (92-164)||(33965412-33965484)
[»] scaffold0024 (1 HSPs)
scaffold0024 (103-168)||(27646-27711)


Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 14 - 268
Target Start/End: Complemental strand, 19243757 - 19243503
Alignment:
Q  14 cagagaaatcgtaagcatgtcaacaagcaggcgcgtagacctaacctaacagtttagttttgattttaggacctgtatggattgacatatttgaacttat 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19243757 cagagaaatcgtaagcatgtcaacaagcaggcgcgtagacctaacctaacagtttagttttgattttagggcctgtatggattgacatatttgaacttat 19243658  T
Q  114 ctactgacataagcatttctgagactgtttgggcgagcttatagaagtagcttatatcaaaacaatttaaatttattttatcttttcattatagaaaaag 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19243657 ctactgacataagcatttctgagactgtttgggcgagcttatagaaacagcttatatcaaaacaatttaaatttattttatcttttcattatagaaaaag 19243558  T
Q  214 cttatatacaagcacttcattaagctccttatccaaacagggtcgtaatattgta 268  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  19243557 cttatatacaagcacttaattaagctccgtatccaaacagggtcgtaatattgta 19243503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 15370240 - 15370301
Alignment:
Q  85 cctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttggg 146  Q
    ||||| ||||||||| ||||||| ||||||||||| ||||||||||| ||||||||||||||    
T  15370240 cctgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttggg 15370301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 32616055 - 32615997
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaa 159  Q
    ||||||||||||||  ||||||||||||||| |||||||||||| | ||||||||||||    
T  32616055 tatttgaacttatcagctgacataagcatttgtgagactgtttgtgggagcttatagaa 32615997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 14209305 - 14209240
Alignment:
Q  134 gagactgtttgggcgagcttatagaagtagcttatatcaaaacaatttaaatttattttatctttt 199  Q
    ||||||| ||||| |||||||| ||| |||||||||| |||||| ||| |||||||||||||||||    
T  14209305 gagactgcttgggagagcttatggaaatagcttatatgaaaacagtttgaatttattttatctttt 14209240  T

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Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 22878245 - 22878181
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||||||| ||||||| |||||| ||||||||||||| || |||||||||||||| || |||||    
T  22878245 tggattgacttatttgagcttatccactgacataagcacttgtgagactgtttgggagaccttat 22878181  T

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Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 2416314 - 2416276
Alignment:
Q  161 tagcttatatcaaaacaatttaaatttattttatctttt 199  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  2416314 tagcttatatcaaaacaatttaacttcattttatctttt 2416276  T

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Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 15120340 - 15120266
Alignment:
Q  81 aggacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    |||| |||| ||||||||| ||||||||||||||||||  ||||| || || |||  ||||||||| ||||||||    
T  15120340 aggatctgtttggattgacttatttgaacttatctactagcataaacagttgtgaatctgtttgggagagcttat 15120266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 13867025 - 13866972
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttg 144  Q
    ||||||||| ||||||| ||||||||||| ||||| || || ||||||||||||    
T  13867025 tggattgacctatttgagcttatctactgccataaacacttgtgagactgtttg 13866972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 155
Target Start/End: Complemental strand, 30331911 - 30331835
Alignment:
Q  78 tttaggacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    |||||| | ||| ||||||||| ||||| | ||||||||||||||||||  ||| |||||||||||||| || |||||    
T  30331911 tttagggcttgtttggattgacttatttcagcttatctactgacataag-ttttgtgagactgtttgggagaacttat 30331835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 43199972 - 43199927
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttggg 146  Q
    |||||||||||||||||| | ||||||| || ||||||||||||||    
T  43199972 tatttgaacttatctactcatataagcacttgtgagactgtttggg 43199927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 17443541 - 17443585
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgg 145  Q
    ||||||||||||| |||||| ||||||| || |||||||||||||    
T  17443541 tatttgaacttatatactgatataagcacttgtgagactgtttgg 17443585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 153
Target Start/End: Original strand, 25800594 - 25800654
Alignment:
Q  93 gattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagctt 153  Q
    ||||||| |||||||||||||||||| || | |||| |  |||||||||||||| ||||||    
T  25800594 gattgacttatttgaacttatctactaacgtgagcactcgtgagactgtttgggagagctt 25800654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 42852635 - 42852679
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgg 145  Q
    ||||||||||||||| ||| |||||||| || |||||||||||||    
T  42852635 tatttgaacttatctgctggcataagcacttgtgagactgtttgg 42852679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 4549464 - 4549532
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaa 159  Q
    ||||||| | |||||||  |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  4549464 tggattggcttatttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaa 4549532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 144
Target Start/End: Original strand, 24460310 - 24460377
Alignment:
Q  77 ttttaggacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttg 144  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||||||| |||| || ||||||||||||    
T  24460310 ttttagggcctgtttggattgacttatttgaacttatctactgacatgagcacttgtgagactgtttg 24460377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 5157232 - 5157151
Alignment:
Q  78 tttaggacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaa 159  Q
    ||||||| || | ||||||||| ||||||||||||||||| ||||||| || || ||| |||||||||| ||||||||||||    
T  5157232 tttaggatctatttggattgacttatttgaacttatctacggacataaacacttgtgaaactgtttgggagagcttatagaa 5157151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 23373224 - 23373304
Alignment:
Q  79 ttaggacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaa 159  Q
    ||||| ||||| || |||||| ||||||||||| |||||||| ||||||| || ||||| |||||||| ||||||||||||    
T  23373224 ttagggcctgtttgaattgacttatttgaacttgtctactgatataagcacttgtgagattgtttgggagagcttatagaa 23373304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 27807259 - 27807198
Alignment:
Q  94 attgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    |||||| ||||||||||| ||||||||||||||||||| | |||||||||| | ||||||||    
T  27807259 attgacttatttgaacttttctactgacataagcatttgtaagactgtttgagagagcttat 27807198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 6292639 - 6292584
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttggg 146  Q
    ||||||||| ||||||| |||||||||||||||||||| || ||||| ||||||||    
T  6292639 tggattgacttatttgagcttatctactgacataagcacttttgagattgtttggg 6292584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 155
Target Start/End: Original strand, 32515358 - 32515428
Alignment:
Q  85 cctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||| ||||||  |||||||||  ||||||||| ||||||||| || |||||||||||||| ||||||||    
T  32515358 cctgtttggattagcatatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttat 32515428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 44815236 - 44815274
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagact 139  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  44815236 tatttgaacttatctactgacataagcatttgtgagact 44815274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 46499924 - 46499991
Alignment:
Q  162 agcttatatcaaaacaatttaaatttattttatcttttcattatagaaaaagcttatatacaagcactt 230  Q
    |||||| || |||||||||| | |||||||||||||||| ||||||||| |||||||| | ||||||||    
T  46499924 agcttaaataaaaacaatttgactttattttatcttttc-ttatagaaatagcttatagataagcactt 46499991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 5924159 - 5924108
Alignment:
Q  92 ggattgacatatttgaacttatctactgacataagcatttctgagactgttt 143  Q
    |||||||| ||||||||||||| |||||||||| |||||| | |||||||||    
T  5924159 ggattgacttatttgaacttatttactgacatacgcatttgtaagactgttt 5924108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 33723297 - 33723360
Alignment:
Q  83 gacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttggg 146  Q
    ||||||| ||||||||| ||||||||||||||||||  ||||| || || |||||||| |||||    
T  33723297 gacctgtttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttggg 33723360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 155
Target Start/End: Complemental strand, 9507368 - 9507314
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||||| ||||||||||  |||| |||||| |||||||||||||| ||||||||    
T  9507368 tatttgagcttatctactagcataggcatttgtgagactgtttgggagagcttat 9507314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 113
Target Start/End: Complemental strand, 19605252 - 19605215
Alignment:
Q  76 attttaggacctgtatggattgacatatttgaacttat 113  Q
    |||||||||||||||||||||||| ||||||| |||||    
T  19605252 attttaggacctgtatggattgacttatttgagcttat 19605215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 33976330 - 33976257
Alignment:
Q  86 ctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaa 159  Q
    |||| ||||||||| ||||||| ||||| || |||||| |||| || |||||| ||||||  ||||||||||||    
T  33976330 ctgtttggattgacttatttgagcttatttaatgacatcagcacttgtgagacagtttggttgagcttatagaa 33976257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 3597194 - 3597258
Alignment:
Q  81 aggacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgg 145  Q
    ||||||||| ||||||||| |||||||  ||||||| ||| |||| || || |||||||||||||    
T  3597194 aggacctgtttggattgacttatttgaggttatctaatgatataaccacttgtgagactgtttgg 3597258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 12564425 - 12564485
Alignment:
Q  94 attgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagctta 154  Q
    |||||| ||||||| ||||| |||||| ||||||| || || ||||||||||| |||||||    
T  12564425 attgacttatttgagcttatatactgatataagcacttgtgtgactgtttgggagagctta 12564485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 41638251 - 41638295
Alignment:
Q  111 tatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||||||| ||||||||||| |||||||||||||| ||| ||||    
T  41638251 tatctactggcataagcatttgtgagactgtttgggagagattat 41638295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Original strand, 43368610 - 43368672
Alignment:
Q  78 tttaggacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactg 140  Q
    |||||||||||| ||||||||| ||||||| |||||||||| |||||||||||| ||||||||    
T  43368610 tttaggacctgtttggattgacttatttgatcttatctactaacataagcatttgtgagactg 43368672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 14926892 - 14926967
Alignment:
Q  78 tttaggacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagctt 153  Q
    |||||| | ||| ||||||||| ||||||||||||| ||||| |||||||| || |||||||||||| | ||||||    
T  14926892 tttagggcttgtttggattgacttatttgaacttatttactggcataagcacttgtgagactgtttgagagagctt 14926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 24326167 - 24326114
Alignment:
Q  102 atttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    |||||| ||||||||||| |||||||| || |||||||||||||| ||||||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggagagcttat 24326114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 145
Target Start/End: Original strand, 37353090 - 37353149
Alignment:
Q  86 ctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgg 145  Q
    |||| ||||| ||| ||| ||||| |||||||||||||||||| || |||||||||||||    
T  37353090 ctgtttggatcgacttatctgaacctatctactgacataagcacttgtgagactgtttgg 37353149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 38602480 - 38602410
Alignment:
Q  85 cctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttata 156  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||  ||| |||| ||||||||| || ||||||    
T  38602480 cctgtttggattgacttatttgagcttatctactgacataag-ttttgtgaggctgtttgggagaacttata 38602410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 43208077 - 43208132
Alignment:
Q  89 tatggattgacatatttgaacttatctactgacataagcatttctgagactgtttg 144  Q
    |||| |||||| ||||||||||||||||||||||||  || | |||||||||||||    
T  43208077 tatgaattgacttatttgaacttatctactgacatacacactactgagactgtttg 43208132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 4558799 - 4558742
Alignment:
Q  161 tagcttatatcaaaacaatttaaatttattttatcttttcattatagaaaaagcttata 219  Q
    |||| ||||| |||| ||||||| ||||||||||||||| |||||||||| ||||||||    
T  4558799 tagcatatatgaaaataatttaactttattttatctttt-attatagaaatagcttata 4558742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 42237491 - 42237529
Alignment:
Q  161 tagcttatatcaaaacaatttaaatttattttatctttt 199  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  42237491 tagcttatatgaaaacaatttaactttattttatctttt 42237529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 778544 - 778483
Alignment:
Q  83 gacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttg 144  Q
    ||||||| ||| ||||| |||||| |||||| |||||| ||||||| || ||||||||||||    
T  778544 gacctgtttggtttgacttatttgtacttatttactgaaataagcacttgtgagactgtttg 778483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 8535989 - 8536042
Alignment:
Q  102 atttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||||| ||||||||||||||||| | || |||||||||||||| ||| ||||    
T  8535989 atttgaatttatctactgacataagtacttgtgagactgtttgggagagtttat 8536042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 26410408 - 26410363
Alignment:
Q  110 ttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||| ||||||||||||| ||||||||||| ||||| ||||||||    
T  26410408 ttatcaactgacataagcacttctgagactgcttgggagagcttat 26410363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 198
Target Start/End: Original strand, 35374442 - 35374479
Alignment:
Q  161 tagcttatatcaaaacaatttaaatttattttatcttt 198  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  35374442 tagcttatatgaaaacaatttaactttattttatcttt 35374479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 2364393 - 2364437
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgg 145  Q
    ||||||||||||||| |||||||||| | || |||||||||||||    
T  2364393 tatttgaacttatcttctgacataagtacttgtgagactgtttgg 2364437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 2487931 - 2487995
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||||| | |||||||  | ||||||||||||||||| || |||||||||||||| || |||||    
T  2487931 tggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttat 2487995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 12361341 - 12361262
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgag--cttatagaagtagcttat 168  Q
    ||||||||| |||||||||||||||||||| ||||| | || | ||||| |||| | |||  ||||||||| ||||||||    
T  12361341 tggattgacttatttgaacttatctactgatataagtacttgttagactctttgagagagatcttatagaaatagcttat 12361262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 1418578 - 1418498
Alignment:
Q  79 ttaggacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaa 159  Q
    ||||||| ||| ||||||||| ||||||| ||||||||||| |||||||| || |||| ||||||| | ||||||||||||    
T  1418578 ttaggacttgtttggattgacttatttgagcttatctactggcataagcacttatgaggctgtttgtgagagcttatagaa 1418498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 30751666 - 30751598
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaa 159  Q
    |||||| || ||||| |||||||||||||||||||||| || || ||||||||||| ||||||||||||    
T  30751666 tggattaacttatttaaacttatctactgacataagcacttgtgcgactgtttgggagagcttatagaa 30751598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 29363666 - 29363603
Alignment:
Q  80 taggacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgttt 143  Q
    ||||| |||| ||||||| | |||||||||||||||||| ||||||||| || |||||||||||    
T  29363666 taggatctgtttggattggcttatttgaacttatctactaacataagcacttgtgagactgttt 29363603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 159
Target Start/End: Original strand, 48157053 - 48157111
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaa 159  Q
    ||||||| ||||| ||||||  ||||||||| |||||||||||||| ||||||||||||    
T  48157053 tatttgagcttatttactgatttaagcatttgtgagactgtttgggagagcttatagaa 48157111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 5620075 - 5620154
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaagtagcttatat 170  Q
    ||||||||| |||||||||| |||||||| ||||||   || ||| |||||||| | ||| ||||||||||| |||||||    
T  5620075 tggattgacttatttgaactcatctactggcataagttcttgtgatactgtttgagagagattatagaagtaacttatat 5620154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 9210968 - 9210914
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttggg 146  Q
    ||||||||| ||||||| |||||||||||| |||||  ||||||||||||||||||    
T  9210968 tggattgacttatttgagcttatctactgatataag-ttttctgagactgtttggg 9210914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 31002808 - 31002882
Alignment:
Q  95 ttgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaagtagcttata 169  Q
    ||||| || |||| ||||||||||| |||||||| || |||||||||||||  ||||||||| ||  ||||||||    
T  31002808 ttgacttaattgagcttatctactgtcataagcaattgtgagactgtttggatgagcttataaaaacagcttata 31002882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 155
Target Start/End: Original strand, 36598289 - 36598343
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    |||||||||||| ||||||||||||||| || ||||| |||||| | ||||||||    
T  36598289 tatttgaacttaactactgacataagcaattgtgagattgtttgagagagcttat 36598343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 155
Target Start/End: Original strand, 43854974 - 43855028
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    |||||||||||||||||| ||||||||||||  || ||| |||||| ||||||||    
T  43854974 tatttgaacttatctactaacataagcatttgcgacactatttgggagagcttat 43855028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 2727281 - 2727318
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagca 128  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  2727281 tggattgatttatttgaacttatctactgacataagca 2727318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 48157189 - 48157237
Alignment:
Q  161 tagcttatatcaaaacaatttaaatttattttatcttttcattatagaaa 210  Q
    |||||||||| |||||||||| | ||||||||||||||| ||||||||||    
T  48157189 tagcttatattaaaacaatttcactttattttatctttt-attatagaaa 48157237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 8427160 - 8427100
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagc 151  Q
    ||||||||  ||||||| |||||||||| ||||||| | || |||||||||||||| ||||    
T  8427160 tggattgatttatttgagcttatctactaacataagtacttgtgagactgtttgggggagc 8427100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 22387819 - 22387883
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||||||| || | |||||||| ||||||||||| ||  | |||||||||||||| ||||||||    
T  22387819 tggattgacttactagaacttatttactgacataaacacgtgtgagactgtttgggagagcttat 22387883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 28691754 - 28691810
Alignment:
Q  86 ctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtt 142  Q
    |||| ||||||||| |||||||  |||||| || |||||||||||| ||||||||||    
T  28691754 ctgtttggattgacttatttgagtttatctgctaacataagcatttgtgagactgtt 28691810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 31751682 - 31751734
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgttt 143  Q
    ||||||||| ||||| ||||||| || | |||||||||||| |||||||||||    
T  31751682 tggattgacttatttaaacttatgtagtcacataagcatttgtgagactgttt 31751734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 37064147 - 37064199
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgggcgagctt 153  Q
    |||||||||||||||| ||||||||||| || |||||| ||||| | ||||||    
T  37064147 tatttgaacttatctagtgacataagcacttgtgagacggtttgtgagagctt 37064199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 18628478 - 18628540
Alignment:
Q  93 gattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||||| ||||||| ||||||||||||||||| || || |||||||||||||| ||||||||    
T  18628478 gattgacgtatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttat 18628540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 15173217 - 15173280
Alignment:
Q  82 ggacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttggg 146  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||  ||| ||||||||||||||    
T  15173217 ggaccagtttggattgacttatttgaacttatctactgacataag-ttttgtgagactgtttggg 15173280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 51630112 - 51630074
Alignment:
Q  161 tagcttatatcaaaacaatttaaatttattttatctttt 199  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  51630112 tagcttatatcaaaacaatttaactttattttatctttt 51630074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 1017175 - 1017107
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaa 159  Q
    ||||||||| ||||||| || |||||||||||||| || || |||||||||||||  || |||||||||    
T  1017175 tggattgacttatttgagctaatctactgacataaacacttgtgagactgtttggaagaacttatagaa 1017107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 158
Target Start/End: Complemental strand, 2811615 - 2811551
Alignment:
Q  94 attgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttataga 158  Q
    |||||| |||||||  |||||||||| ||||||||||| |||||||||||| | ||| |||||||    
T  2811615 attgacttatttgaggttatctactggcataagcatttatgagactgtttgagagagattataga 2811551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 155
Target Start/End: Complemental strand, 46860065 - 46860001
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||||||| |||||||||||||||| | ||||||||| || ||| |||||||| | ||||||||    
T  46860065 tggattgacttatttgaacttatctattcacataagcacttgtgaaactgtttgagagagcttat 46860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 50298667 - 50298608
Alignment:
Q  86 ctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgg 145  Q
    ||||||| |||||  ||||| | |||||||||||||||||||| || |||||||||||||    
T  50298667 ctgtatgaattgatttattttagcttatctactgacataagcacttgtgagactgtttgg 50298608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 54277248 - 54277323
Alignment:
Q  93 gattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaagtagcttat 168  Q
    ||||||| |||||||||||||||| |||||||| || || |||||||||| | | ||||||| ||||  |||||||    
T  54277248 gattgacttatttgaacttatctagtgacataaacacttatgagactgttagcgagagcttacagaaacagcttat 54277323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 155
Target Start/End: Complemental strand, 2996710 - 2996656
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||||||||||| || ||||||||||| || |||||||||||| | ||||||||    
T  2996710 tatttgaacttatttattgacataagcacttttgagactgtttgagagagcttat 2996656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 1312988 - 1312935
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttg 144  Q
    ||||||||| |||||| |||||||||||| ||||||||| | || |||||||||    
T  1312988 tggattgacttatttgcacttatctactggcataagcatgtgtgtgactgtttg 1312935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 25896931 - 25896854
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaagtagcttat 168  Q
    |||||| || |||||||  |||||||||  ||| |||| || ||||||||||| || |||||||||||| ||||||||    
T  25896931 tggattcacttatttgagtttatctactagcattagcacttgtgagactgtttaggagagcttatagaaatagcttat 25896854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 144
Target Start/End: Original strand, 2236915 - 2236956
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttg 144  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||    
T  2236915 tatttgaacttatctactgacataag--tttatgagactgtttg 2236956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 22471401 - 22471357
Alignment:
Q  111 tatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    |||||||||||||||||| || |||||||||||||| || |||||    
T  22471401 tatctactgacataagcacttgtgagactgtttgggagaacttat 22471357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 27043748 - 27043788
Alignment:
Q  86 ctgtatggattgacatatttgaacttatctactgacataag 126  Q
    |||| ||||||||| ||||||| ||||||||||||||||||    
T  27043748 ctgtttggattgacttatttgagcttatctactgacataag 27043788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 41097180 - 41097247
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaa 159  Q
    ||||||||  |||||||||||||||| || || ||||| || |||||||||| ||| ||||||||||||    
T  41097180 tggattgagttatttgaacttatcta-tgtcaaaagcacttgtgagactgttcgggagagcttatagaa 41097247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 53943756 - 53943689
Alignment:
Q  85 cctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||||||||||||  ||||||||||||||||||   ||||||| || ||| ||| |||||| ||||||||    
T  53943756 cctgtatggattgaattatttgaacttatctact---ataagcacttatgaaactatttgggagagcttat 53943689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 32171604 - 32171551
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgggcgagctta 154  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||    
T  32171604 tatttgaacttatttactgacataagcatttgtgagactggttgggagagctta 32171551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 32848529 - 32848596
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaagtagcttat 168  Q
    ||||||| ||||||||||||||||||||||| |||| | ||| ||| |||||||| ||| ||||||||    
T  32848529 tatttgagcttatctactgacataagcatttgtgagtccgttggggagagcttatggaaatagcttat 32848596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 33067307 - 33067241
Alignment:
Q  89 tatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||||||||| ||| |||| ||||||||||||||||||| || | |||||| ||||| ||||||||    
T  33067307 tatggattgacctatgtgaatttatctactgacataagcacttgtaagactgattgggagagcttat 33067241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 8420130 - 8420197
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaagtagcttat 168  Q
    ||||||| |||||||| |||||||| || || |||||||||| | | |||||||||||| ||||||||    
T  8420130 tatttgagcttatctattgacataaacacttgtgagactgttagtgagagcttatagaaatagcttat 8420197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 31624248 - 31624195
Alignment:
Q  172 aaaacaatttaaatttattttatcttttcattatagaaaaagcttatatacaagc 226  Q
    ||||||||||||| ||||||||||||||  ||||||||| |||||||| ||||||    
T  31624248 aaaacaatttaaacttattttatctttt-gttatagaaatagcttatacacaagc 31624195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 33068520 - 33068562
Alignment:
Q  86 ctgtatggattgacatatttgaacttatctactgacataagca 128  Q
    |||| ||||||| | ||||||||||||||||||||||||||||    
T  33068520 ctgtttggattggcttatttgaacttatctactgacataagca 33068562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 2112190 - 2112153
Alignment:
Q  173 aaacaatttaaatttattttatcttttcattatagaaa 210  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  2112190 aaacaatttaactttattttatctttttattatagaaa 2112153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 3180996 - 3181045
Alignment:
Q  95 ttgacatatttgaacttatctactgacataagcatttctgagactgtttg 144  Q
    ||||| ||||||||||||||||| |||||||||| || ||||||| ||||    
T  3180996 ttgacttatttgaacttatctacagacataagcacttgtgagactatttg 3181045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 9093625 - 9093681
Alignment:
Q  161 tagcttatatcaaaacaatttaaatttattttatcttttcattatagaaaaagcttat 218  Q
    |||||||||  |||||||||||| ||||||||||||||| | |||||||| |||||||    
T  9093625 tagcttatacgaaaacaatttaactttattttatcttttga-tatagaaatagcttat 9093681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 24333090 - 24333021
Alignment:
Q  86 ctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    |||| ||||||||||||||| |  |||| ||||||||||||||||| | | |||||||||  ||||||||    
T  24333090 ctgtttggattgacatatttcagtttatgtactgacataagcatttgtcatactgtttggtggagcttat 24333021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 26177291 - 26177246
Alignment:
Q  110 ttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    |||||||| ||||||| ||||||| |||||||||||| ||||||||    
T  26177291 ttatctaccgacataaacatttctcagactgtttgggagagcttat 26177246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 24973960 - 24974016
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatag 157  Q
    ||||||||||||||| |||||||||||| || | ||| |||||||  ||||||||||    
T  24973960 tatttgaacttatctgctgacataagcacttgtaagattgtttggtagagcttatag 24974016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 35070377 - 35070445
Alignment:
Q  78 tttaggacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttggg 146  Q
    |||||||| ||| ||||||  | ||||||| |||||||||| ||||||||| || || |||||||||||    
T  35070377 tttaggacttgtttggattttcttatttgagcttatctactaacataagcacttgtgggactgtttggg 35070445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000009; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 41819613 - 41819556
Alignment:
Q  161 tagcttatatcaaaacaatttaaatttattttatcttttcattatagaaaaagcttata 219  Q
    |||||||||  |||||||||||||||||||||||| || ||||||||||| ||||||||    
T  41819613 tagcttatacaaaaacaatttaaatttattttatc-ttccattatagaaatagcttata 41819556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 34205393 - 34205348
Alignment:
Q  86 ctgtatggattgacatatttgaacttatctactgacataagcattt 131  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||||    
T  34205393 ctgtttggattgacttatttgaacttatttactgacataagcattt 34205348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 17369356 - 17369316
Alignment:
Q  85 cctgtatggattgacatatttgaacttatctactgacataa 125  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  17369356 cctgtttggattgacttatttgaacttatctactgacataa 17369316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 4855855 - 4855776
Alignment:
Q  78 tttaggacctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatag 157  Q
    |||| ||||||||| ||||||| ||||||| ||||| || |||| ||| || || |||||||||||| | ||||||||||    
T  4855855 tttaagacctgtattgattgacttatttgagcttatataatgacttaaacacttgtgagactgtttgagagagcttatag 4855776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 9202819 - 9202885
Alignment:
Q  163 gcttatatcaaaacaatttaaatttattttatcttttcattatagaaaaagcttatatacaagcactt 230  Q
    |||||||| |||||||||||| |||||||||||||||   || ||||| |||||||||| ||||||||    
T  9202819 gcttatatgaaaacaatttaactttattttatctttt-gctacagaaatagcttatatataagcactt 9202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 28586683 - 28586766
Alignment:
Q  85 cctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaagtagcttat 168  Q
    ||||| |||||||||  |||||||||  |||| |  ||||||||||| ||| |||||||||| |||||||| ||| ||||||||    
T  28586683 cctgtttggattgactaatttgaactagtctaatagcataagcatttgtgaaactgtttgggagagcttatggaaatagcttat 28586766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 7674647 - 7674590
Alignment:
Q  163 gcttatatcaaaacaatttaaatttattttatcttttcattatagaaaaagcttatata 221  Q
    |||||||  ||||||||||||||||||||||||||||   |||||||| ||||||||||    
T  7674647 gcttataagaaaacaatttaaatttattttatctttt-ggtatagaaatagcttatata 7674590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 155
Target Start/End: Complemental strand, 10303941 - 10303879
Alignment:
Q  93 gattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||| ||||||||| ||||||||| ||||||||||||| ||||| | |||| | ||||||||    
T  10303941 gattggcatatttgagcttatctacggacataagcatttgtgagattatttgagagagcttat 10303879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 155
Target Start/End: Complemental strand, 15015980 - 15015927
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||||| || |||||    
T  15015980 tatttgagcttatctactgacataagc-tttgtgagactgtttgggagaacttat 15015927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 167
Target Start/End: Original strand, 42181003 - 42181084
Alignment:
Q  86 ctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaagtagctta 167  Q
    |||| |||||||||  |||||||||||| ||||  |||| |||||| ||||||  |||||| |||||||| ||| |||||||    
T  42181003 ctgtttggattgactaatttgaacttatttactagcatatgcatttgtgagacaatttgggagagcttatggaaatagctta 42181084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 31208624 - 31208564
Alignment:
Q  86 ctgtatggattgacatatttgaacttatctactgacataagcatttctgagactgtttggg 146  Q
    |||| ||||||||| |||||||||| | |||||||||||||||    ||||||||||||||    
T  31208624 ctgtttggattgacttatttgaactgaactactgacataagcacccgtgagactgtttggg 31208564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 21872218 - 21872272
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgg 145  Q
    |||||| || ||||||| |||||||||||||||||||| || |||||||||||||    
T  21872218 tggattaacttatttgatcttatctactgacataagcacttgtgagactgtttgg 21872272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 42808979 - 42808923
Alignment:
Q  162 agcttatatcaaaacaatttaaatttattttatcttttcattatagaaaaagcttata 219  Q
    ||||||||| |||||||||||| |||||||||||||||  ||||||||| ||||||||    
T  42808979 agcttatataaaaacaatttaactttattttatctttt-gttatagaaacagcttata 42808923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 45590795 - 45590734
Alignment:
Q  94 attgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    |||||| | ||||||||||||||||  |||||||| || |||||||||||||| ||||||||    
T  45590795 attgacttttttgaacttatctactagcataagcacttgtgagactgtttgggagagcttat 45590734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 16072952 - 16072999
Alignment:
Q  79 ttaggacctgtatggattgacatatttgaacttatctactgacataag 126  Q
    ||||||||||| ||||||||| ||||||| |||||||| |||||||||    
T  16072952 ttaggacctgtttggattgacttatttgagcttatctaatgacataag 16072999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 22667540 - 22667497
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttg 144  Q
    ||||||| |||||||||||||||||||| || ||||||||||||    
T  22667540 tatttgagcttatctactgacataagcacttgtgagactgtttg 22667497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 22724179 - 22724136
Alignment:
Q  101 tatttgaacttatctactgacataagcatttctgagactgtttg 144  Q
    ||||||| |||||||||||||||||||| || ||||||||||||    
T  22724179 tatttgagcttatctactgacataagcacttgtgagactgtttg 22724136  T

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Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 32703139 - 32703082
Alignment:
Q  161 tagcttatatcaaaacaatttaaatttattttatcttttcattatagaaaaagcttata 219  Q
    |||||||||| |||||||||| | ||||||||||||||| || ||||||| ||||||||    
T  32703139 tagcttatatgaaaacaatttgagtttattttatctttt-ataatagaaatagcttata 32703082  T

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Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 15304420 - 15304472
Alignment:
Q  165 ttatatcaaaacaatttaaatttattttatcttttcattatagaaaaagcttat 218  Q
    |||||| |||||||||||| |||||||||||||||  ||||||||| |||||||    
T  15304420 ttatatgaaaacaatttaactttattttatctttt-gttatagaaatagcttat 15304472  T

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Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 42809301 - 42809245
Alignment:
Q  162 agcttatatcaaaacaatttaaatttattttatcttttcattatagaaaaagcttata 219  Q
    ||||||||| |||||||||||| | |||||||||||||  ||||||||| ||||||||    
T  42809301 agcttatatgaaaacaatttaactatattttatctttt-gttatagaaatagcttata 42809245  T

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Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 2081006 - 2081042
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagc 127  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  2081006 tggattgacttatttgaacttatctattgacataagc 2081042  T

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Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 20194956 - 20195020
Alignment:
Q  91 tggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttat 155  Q
    ||||||||  ||||||||||||||| ||  |||||||| || |||||||||||| | ||||||||    
T  20194956 tggattgatttatttgaacttatcttcttgcataagcagttgtgagactgtttgtgagagcttat 20195020  T

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Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 33965412 - 33965484
Alignment:
Q  92 ggattgacatatttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaagtagc 164  Q
    |||||||||||||||| ||||||||||||| ||| ||  | ||||||||||| || || ||||| ||| ||||    
T  33965412 ggattgacatatttgagcttatctactgacttaaacacatgtgagactgtttaggagaccttatggaaatagc 33965484  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 168
Target Start/End: Complemental strand, 27711 - 27646
Alignment:
Q  103 tttgaacttatctactgacataagcatttctgagactgtttgggcgagcttatagaagtagcttat 168  Q
    ||||| || ||||||||||||| | | ||||||||||||||||| |||||||| ||| ||||||||    
T  27711 tttgagctgatctactgacatatgtacttctgagactgtttgggagagcttatggaaatagcttat 27646  T

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