View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19773_low_71 (Length: 259)
Name: NF19773_low_71
Description: NF19773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19773_low_71 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 35042302 - 35042060
Alignment:
| Q |
1 |
atggctacatttctttttatctgttagtaatgcatcttattatctcatccgataagtttggttatttcaatactcatctccttgcaattcctttgactat |
100 |
Q |
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| T |
35042302 |
atggctacatttctttttatctgctagtaatgcatcttattatctcatccgataagtttggttatttcaatactcgtctccttgcaattcctttcactat |
35042203 |
T |
|
| Q |
101 |
tatttcatttcacaaattgtcaatttttctctcttatgatnnnnnnntaaatgagctagatcttatcaaatattgtgaaaaattatcaagagagattgat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35042202 |
tatttcatttcacaaattgtcaatttttctctcttatgataaaaaaataaatgagctagatcttatcaaatattgtgaaaaattatcaagagagattgat |
35042103 |
T |
|
| Q |
201 |
ataaatttattttctcaggtgtaatattaactctagagctttc |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35042102 |
ataaatttattttctcaggtgtaatattaactctagagctttc |
35042060 |
T |
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