View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19774_high_42 (Length: 234)
Name: NF19774_high_42
Description: NF19774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19774_high_42 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 4562595 - 4562808
Alignment:
| Q |
1 |
aaaaattactgctttatattctactattattaacaagaattacttgttaaaaagtttcatattctacaaaaattgataaaacattatataaaattaatat |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
4562595 |
aaaaattactgctttatattctactattattaacaagaattacttgttaaaaagtttcatattctactaaaattgataaaacattatataaaattaatat |
4562694 |
T |
|
| Q |
101 |
tttctcagcaaaaagattgaattggttgattctgttatgaaaatcattagcttaattattttggtgtaaattggatattctctgtgcgcaactgaagaca |
200 |
Q |
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||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||| |
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| T |
4562695 |
tttctcagc-aaaatattgaattggttgattctcttatgaaaatcattagcttaattatttt-gtgtaaatcggatattctctatgcgcaactgcagaca |
4562792 |
T |
|
| Q |
201 |
ctaatctctcgaacat |
216 |
Q |
| |
|
|||||||||| ||||| |
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| T |
4562793 |
ctaatctctcaaacat |
4562808 |
T |
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