View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19774_low_36 (Length: 243)

Name: NF19774_low_36
Description: NF19774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19774_low_36
NF19774_low_36
[»] chr7 (7 HSPs)
chr7 (36-170)||(39616943-39617077)
chr7 (81-166)||(11668219-11668304)
chr7 (95-161)||(11668611-11668677)
chr7 (88-169)||(8648669-8648750)
chr7 (81-166)||(44484788-44484872)
chr7 (91-169)||(11482092-11482171)
chr7 (105-169)||(581385-581449)
[»] chr5 (7 HSPs)
chr5 (88-169)||(16364318-16364399)
chr5 (96-169)||(29384941-29385014)
chr5 (88-169)||(10731626-10731707)
chr5 (88-169)||(16364525-16364606)
chr5 (81-166)||(11991051-11991136)
chr5 (88-161)||(7957936-7958009)
chr5 (89-130)||(11991618-11991659)
[»] chr3 (8 HSPs)
chr3 (81-169)||(40243862-40243950)
chr3 (88-166)||(18194911-18194989)
chr3 (88-167)||(40736822-40736901)
chr3 (81-166)||(18194662-18194747)
chr3 (82-166)||(9393233-9393317)
chr3 (81-166)||(27080145-27080231)
chr3 (88-164)||(9393084-9393156)
chr3 (90-169)||(10822519-10822598)
[»] chr2 (5 HSPs)
chr2 (88-166)||(34323601-34323678)
chr2 (81-169)||(34323381-34323468)
chr2 (81-152)||(16642065-16642135)
chr2 (88-161)||(10423654-10423727)
chr2 (123-166)||(21265929-21265972)
[»] chr4 (8 HSPs)
chr4 (81-158)||(54851910-54851987)
chr4 (83-169)||(6949660-6949746)
chr4 (81-169)||(54855648-54855736)
chr4 (81-160)||(54854491-54854570)
chr4 (81-169)||(54852336-54852427)
chr4 (91-169)||(54854927-54855006)
chr4 (88-164)||(54853914-54853991)
chr4 (82-161)||(27435651-27435730)
[»] chr8 (1 HSPs)
chr8 (88-166)||(22439233-22439311)
[»] chr1 (1 HSPs)
chr1 (81-169)||(2017868-2017956)
[»] chr6 (2 HSPs)
chr6 (88-166)||(30122917-30122995)
chr6 (107-169)||(2315998-2316060)


Alignment Details
Target: chr7 (Bit Score: 131; Significance: 4e-68; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 36 - 170
Target Start/End: Complemental strand, 39617077 - 39616943
Alignment:
Q  36 gacaaagaaaatgcaaaatatttatacccatcatttaatcaaaatcaaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgta 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39617077 gacaaagaaaatgcaaaatatttatacccatcatttaatcaaaatcaaaaggatataattttgatgacatgtcaaaaaattaagaaggggtaagactgta 39616978  T
Q  136 tttttggtagacattaaatttcataattagagaaa 170  Q
    |||||||||||||||||||||||||||||||||||    
T  39616977 tttttggtagacattaaatttcataattagagaaa 39616943  T

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Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 11668304 - 11668219
Alignment:
Q  81 caaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattaga 166  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  11668304 caaaaggatataattttgatgacgtgtctaaaaattaagaaggggtaagattgtatttttggtagacattaagtttcataattaga 11668219  T

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Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 11668677 - 11668611
Alignment:
Q  95 tttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataa 161  Q
    ||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  11668677 tttgatgacgtgtcaacaaattaagaagggttaagattgtatttttggtagacattaagtttcataa 11668611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 8648750 - 8648669
Alignment:
Q  88 atataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    |||||||||||||||| |||||||| ||| ||||||| ||||| |||||||| |||| | ||||| ||||||||||| ||||    
T  8648750 atataattttgatgacgtgtcaaaatatttagaagggataagattgtattttcggtaaatattaagtttcataattatagaa 8648669  T

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Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 44484872 - 44484788
Alignment:
Q  81 caaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattaga 166  Q
    |||||| ||||||||||  |||  |||||||| ||||||||||| ||||| ||||||||| |||||||||||||||||||| ||||    
T  44484872 caaaaggatataattttactgatgtgtcaaaatattaagaaggg-taagattgtattttttgtagacattaaatttcataaataga 44484788  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 11482171 - 11482092
Alignment:
Q  91 taattttgatgacatgtcaaaaaa-ttaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    ||||||||||||| || ||||||| |||| ||| ||||||| | || ||||||||  |||||| ||||||||||||||||    
T  11482171 taattttgatgacgtgccaaaaaaattaaaaagaggtaagattatacttttggtaatcattaagtttcataattagagaa 11482092  T

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Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 581385 - 581449
Alignment:
Q  105 tgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    |||||||||||||||| |||| || | |||||||||| ||| |||||| |||||||  |||||||    
T  581385 tgtcaaaaaattaagatggggcaatattgtatttttgttagtcattaactttcatatatagagaa 581449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 16364399 - 16364318
Alignment:
Q  88 atataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||    
T  16364399 atataattttgatgacgtgtcaaaaaattaagaaggggtaagattgtatttttggtagacgttaagtttcataattagagaa 16364318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 29385014 - 29384941
Alignment:
Q  96 ttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  29385014 ttgatgacgtgtcaaaaaattaagaaggggtaagattgtatttttggtagacattaagtttcatatttagagaa 29384941  T

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Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 10731626 - 10731707
Alignment:
Q  88 atataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    |||||||||||||||| |||||||||||||||||| ||||||| |||||||||  |||||||||| ||| ||||||||||||    
T  10731626 atataattttgatgacgtgtcaaaaaattaagaagaggtaagattgtatttttaatagacattaagttttataattagagaa 10731707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 169
Target Start/End: Complemental strand, 16364606 - 16364525
Alignment:
Q  88 atataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    ||||||||||||||||   |||||||||||| || ||||| || ||||||||||||| ||||||| ||||||||||||||||    
T  16364606 atataattttgatgacgactcaaaaaattaaaaatgggtaggattgtatttttggtacacattaagtttcataattagagaa 16364525  T

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Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 11991136 - 11991051
Alignment:
Q  81 caaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattaga 166  Q
    |||||| ||||| |||| || | ||||||||||||| ||||||||||||| | ||||||| ||||||||||| ||| |||||||||    
T  11991136 caaaaggatatattttttataatatgtcaaaaaattcagaaggggtaagattatatttttcgtagacattaagttttataattaga 11991051  T

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Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 7958009 - 7957936
Alignment:
Q  88 atataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataa 161  Q
    ||||||||||||| || ||| ||||||||||||||   ||||| ||||||||| ||||||||||| ||| ||||    
T  7958009 atataattttgatcacgtgttaaaaaattaagaagaaataagattgtatttttagtagacattaagtttaataa 7957936  T

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Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 11991659 - 11991618
Alignment:
Q  89 tataattttgatgacatgtcaaaaaattaagaaggggtaaga 130  Q
    |||||||| |||||| |||||||| |||||||||||||||||    
T  11991659 tataatttggatgacgtgtcaaaatattaagaaggggtaaga 11991618  T

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Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 40243950 - 40243862
Alignment:
Q  81 caaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||||||| | ||||||||||||| ||||| ||||||||||||||||    
T  40243950 caaaagaatataattttgatgacgtgtcaaaaaattaataaggggtaagattttatttttggtagaaattaagtttcataattagagaa 40243862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 166
Target Start/End: Original strand, 18194911 - 18194989
Alignment:
Q  88 atataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattaga 166  Q
    |||||||||||||||| |||||||||||||| |||| |  ||| ||| |||||||||||||||||||||||||||||||    
T  18194911 atataattttgatgacgtgtcaaaaaattaataaggagctagattgtgtttttggtagacattaaatttcataattaga 18194989  T

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Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 40736901 - 40736822
Alignment:
Q  88 atataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagag 167  Q
    |||||||||||| ||  ||||||||||||||||||| |||||| |||||||||| |||||||||| ||||||| ||||||    
T  40736901 atataattttgacgatgtgtcaaaaaattaagaaggagtaagattgtatttttgttagacattaagtttcatatttagag 40736822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 166
Target Start/End: Original strand, 18194662 - 18194747
Alignment:
Q  81 caaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattaga 166  Q
    |||||| ||||| ||||||  || ||||||||||||| | ||||||| || ||||||||||||||||||||| |||||||||||||    
T  18194662 caaaaggatatacttttgacaacgtgtcaaaaaattagggaggggtaggattgtatttttggtagacattaagtttcataattaga 18194747  T

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Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 166
Target Start/End: Complemental strand, 9393317 - 9393233
Alignment:
Q  82 aaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattaga 166  Q
    ||||| |||||| |||  |||| ||||||| ||||||||||| |||| | ||||||||||| |||||||||||||||||| ||||    
T  9393317 aaaaggatataaattttttgacgtgtcaaataattaagaaggagtaatattgtatttttggaagacattaaatttcataaataga 9393233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 27080231 - 27080145
Alignment:
Q  81 caaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgta-tttttggtagacattaaatttcataattaga 166  Q
    |||||| | |||||||||||||| |||||||| ||||||||||||||| | |||| ||||| ||| ||||||| ||| |||||||||    
T  27080231 caaaaggaaataattttgatgacgtgtcaaaagattaagaaggggtaatattgtatttttttgtaaacattaagtttaataattaga 27080145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 9393156 - 9393084
Alignment:
Q  88 atataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataatta 164  Q
    |||||||||| ||||  ||||||||||||||||    |||| | ||||||||||||||||||||| |||||||||||    
T  9393156 atataatttttatgatgtgtcaaaaaattaaga----gtaaaaatgtatttttggtagacattaagtttcataatta 9393084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 10822519 - 10822598
Alignment:
Q  90 ataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    |||||||||||||| |||||||||||||| ||| | ||| | |||||||| ||||   ||||| | ||||||||||||||    
T  10822519 ataattttgatgacgtgtcaaaaaattaaaaagagataaaattgtattttgggtaattattaagtgtcataattagagaa 10822598  T

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Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 166
Target Start/End: Original strand, 34323601 - 34323678
Alignment:
Q  88 atataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattaga 166  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  34323601 atataattttgatgacttgtcaaaaaattaagaaggggtaagattgta-ttttggtagacattaagtttcataattaga 34323678  T

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Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 34323381 - 34323468
Alignment:
Q  81 caaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    ||||||| |||||||||||||||   | ||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||    
T  34323381 caaaagtgtataattttgatgacgact-aaaaaattaagtaggggtaagattgtatttttggtacacattaagtttcataattagagaa 34323468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 16642065 - 16642135
Alignment:
Q  81 caaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaa 152  Q
    |||||| ||||||||||||| |  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  16642065 caaaaggatataattttgataat-tgtcaaaaaattaagaaggggtaagattgtatttttggtagacattaa 16642135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 10423654 - 10423727
Alignment:
Q  88 atataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataa 161  Q
    |||||||||||||||| ||| ||||||||||||||   ||||| ||||||||| ||||||||||| ||| ||||    
T  10423654 atataattttgatgacgtgttaaaaaattaagaagatataagattgtatttttagtagacattaagtttaataa 10423727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 166
Target Start/End: Complemental strand, 21265972 - 21265929
Alignment:
Q  123 gggtaagactgtatttttggtagacattaaatttcataattaga 166  Q
    |||||||| ||||||||||||||||||||| |||||||||||||    
T  21265972 gggtaagattgtatttttggtagacattaagtttcataattaga 21265929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 54851910 - 54851987
Alignment:
Q  81 caaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttca 158  Q
    |||||| |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| |||||    
T  54851910 caaaaggatataattttgatgacgtgtcaaaatattaagaaggggtaagattgtatttttggtagacattaagtttca 54851987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 6949746 - 6949660
Alignment:
Q  83 aaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    |||| ||||||| ||||| || ||||||||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||    
T  6949746 aaaggatataatgttgataacgtgtcaaaaaattaagaaggggtacgactttatttttggtagacattaagttttataattagagaa 6949660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 54855648 - 54855736
Alignment:
Q  81 caaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    |||||| |||||||||||||||  |||||||| |||||||| |||||| | |||||||||| |||||||||| ||||||||||||||||    
T  54855648 caaaaggatataattttgatgatgtgtcaaaatattaagaaagggtaaaattgtatttttgttagacattaagtttcataattagagaa 54855736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 54854491 - 54854570
Alignment:
Q  81 caaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcata 160  Q
    |||||| ||||||||||||| ||  ||||||| | ||||||||||||||| ||||||||||||||||||||| |||||||    
T  54854491 caaaaggatataattttgataacgcgtcaaaatactaagaaggggtaagattgtatttttggtagacattaagtttcata 54854570  T

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Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 54852336 - 54852427
Alignment:
Q  81 caaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtag---acattaaatttcataattagagaa 169  Q
    |||||| |||||||||| ||||| |||||||| ||||||||||| ||||| ||||||||||||||   ||||||| ||||||||| ||||||    
T  54852336 caaaaggatataattttaatgacgtgtcaaaatattaagaagggttaagattgtatttttggtagacaacattaagtttcataataagagaa 54852427  T

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Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 54854927 - 54855006
Alignment:
Q  91 taattttgatgacatgtcaaaaaattaagaaggggtaagactgta-tttttggtagacattaaatttcataattagagaa 169  Q
    ||||||||||||| |||||||  |||||||||| |||||| |||| |||||  |||||||||| ||||||||||||||||    
T  54854927 taattttgatgacgtgtcaaactattaagaaggagtaagattgtatttttttttagacattaagtttcataattagagaa 54855006  T

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Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 54853914 - 54853991
Alignment:
Q  88 atataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacatta-aatttcataatta 164  Q
    |||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||| |||| |||||  ||||||||||||    
T  54853914 atataattttgatgacgtgtcaaaatattaaaaagggataagattgtattttttgtaggcattacgatttcataatta 54853991  T

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Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 27435651 - 27435730
Alignment:
Q  82 aaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataa 161  Q
    ||||| |||||||||||| |||||||||||||||||||||| | ||| | |||||||||  |   |||||||||||||||    
T  27435651 aaaagaatataattttgaagacatgtcaaaaaattaagaagagataaaattgtattttttatgatcattaaatttcataa 27435730  T

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Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 22439311 - 22439233
Alignment:
Q  88 atataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattaga 166  Q
    |||||||||||||||| |||||||||||||| |||| |  ||| ||| |||||||||||||||||||||||||||||||    
T  22439311 atataattttgatgacgtgtcaaaaaattaataaggagctagattgtgtttttggtagacattaaatttcataattaga 22439233  T

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Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 2017868 - 2017956
Alignment:
Q  81 caaaagtatataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    ||||| |||||| |||||||||  |||||||| ||||||||||||||| | ||||| |||| || ||||||| ||||||||||||||||    
T  2017868 caaaaatatatacttttgatgatgtgtcaaaatattaagaaggggtaatattgtatgtttgatacacattaagtttcataattagagaa 2017956  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 30122995 - 30122917
Alignment:
Q  88 atataattttgatgacatgtcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattaga 166  Q
    |||| ||||| ||||| | |||||||||||||||||||||||| | ||||||||||||| ||||| ||| |||||||||    
T  30122995 atatgattttaatgacgtatcaaaaaattaagaaggggtaagattatatttttggtagatattaagttttataattaga 30122917  T

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Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 2315998 - 2316060
Alignment:
Q  107 tcaaaaaattaagaaggggtaagactgtatttttggtagacattaaatttcataattagagaa 169  Q
    |||||||||||||||||||||| | || | ||||| |||||||||||||| ||||||||||||    
T  2315998 tcaaaaaattaagaaggggtaaaattgaacttttgatagacattaaatttgataattagagaa 2316060  T

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