View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19774_low_41 (Length: 237)
Name: NF19774_low_41
Description: NF19774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19774_low_41 |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 44451004 - 44451223
Alignment:
| Q |
1 |
aaaaacgtcaacatttaagtatttaacaaaagtcaaagtccaaatgaaattgagcaaaagacatcaacatttagcaaatcattctcggacctattactta |
100 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
44451004 |
aaaaacatcaacatttaagtatttaacaaaagtcaaagtccaaatgaaatttagcaaaagacatcaacatttagcaaatcattctcagacctattactta |
44451103 |
T |
|
| Q |
101 |
tatgaaacaaatcaacaaaacctaataacggaaaaatggttccctctcatcttgtataatgaacacgaatacatttagtatcaagagaaatggtagaaac |
200 |
Q |
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||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||| |
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| T |
44451104 |
tatgaaacaaatcaacaaagcctaataac-gaaaaatggttccctctcatcttgtataatggacacaaatacatttagtatcaagagaaatggtataaac |
44451202 |
T |
|
| Q |
201 |
aatctctttttagtattctct |
221 |
Q |
| |
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||||||||| ||||||||||| |
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| T |
44451203 |
aatctctttctagtattctct |
44451223 |
T |
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