View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19774_low_47 (Length: 209)
Name: NF19774_low_47
Description: NF19774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19774_low_47 |
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Alignment Details
Target: chr1 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 46606749 - 46606580
Alignment:
| Q |
24 |
agagttcagataattgtcacacaaatttaagtgacaaattagtttctaaaattaactagacttaattacatatttggctcatcaagcatcgccattagac |
123 |
Q |
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| T |
46606749 |
agagttcagataattgtctcacaaatttaagtgacaaattagtttctaaaattaactagacttaattacatatttggctcatcaagcatcgccattagac |
46606650 |
T |
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| Q |
124 |
aattttgacctcgatttttaaaacaagcaattttgacctttaatgatttgtattttggaatccccttcat |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46606649 |
aattttgacctcgatttttaaaacaagcaattttgacctttaatgatttgtattttggaatccccttcat |
46606580 |
T |
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