View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19776_high_25 (Length: 379)
Name: NF19776_high_25
Description: NF19776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19776_high_25 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 1 - 379
Target Start/End: Original strand, 45791489 - 45791867
Alignment:
| Q |
1 |
atttacagtatgggtgttagattaagatagcggatcatttgtctcttgattactgtcgacctttgcagtgtaggaagattttatgtgtgtctgtggaaag |
100 |
Q |
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| T |
45791489 |
atttacagtatgggtgttagattcagatagcggatcatttgtctcttgattactgttgacctttgcagtgtaggaagattttatgtgtgtctgtggaaag |
45791588 |
T |
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| Q |
101 |
agagcttgggagggatatagaacatggttgttagagccaacgagtggcaaccccgaattgcttccgtgacattctcacggtgatatttggatccagtcat |
200 |
Q |
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| T |
45791589 |
agagcttgggagggatatagaacatggttgttagagccaacgagtggcaaccccgaattgcttccgtgacattctcacggtgatatttggatccagtcat |
45791688 |
T |
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| Q |
201 |
attgatttgtgatatctttctatggtagaattatgagatgtgcgatattcttttatccaagtttattgttggggcaaatcaaagggtcaaaaagcactgc |
300 |
Q |
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| T |
45791689 |
attgatttgtgatatgtttctatggtagaattatgagatgtgcgatattcttttatccaagtttattgttggggcaaatcaaagggtcaaaaagcactgc |
45791788 |
T |
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| Q |
301 |
ctatttttgggttaacctagcatgaagaaagtaaaatctgacaccttggtgtataatttgttttatgtatacatgttat |
379 |
Q |
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| T |
45791789 |
ctatttttgggttaacctagcatgaagaaagtaaaatctgacaccttggtgtataatttgttttatgtatacatgttat |
45791867 |
T |
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