View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19776_high_35 (Length: 316)
Name: NF19776_high_35
Description: NF19776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19776_high_35 |
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Alignment Details
Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 44722908 - 44722619
Alignment:
| Q |
1 |
aattgaagaactaaattgaaggattaataatattgtttatgaataacttatttagacttcctatctaagaataacttaatatttttcccattgtgccaat |
100 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44722908 |
aattgaagaactaaattgaaggattaataatatggtttatgaataacttatttagacttcctatctaagaataacttaatatttttcccattgtgccaat |
44722809 |
T |
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| Q |
101 |
tatctagactccctatctttcnnnnnnnngagggatctagactgcctatcttaaagcctcgttatccactcaaatgatcaagacttagattgtccatgct |
200 |
Q |
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||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44722808 |
tatctagactccctatctttcttttttttgagagatctagactgcctatcttaaagcctcgttatccactcaaatgatcaagacttagattgtccatgct |
44722709 |
T |
|
| Q |
201 |
tagagagctagctttatcaaatgagatggtatctatttaaagcatacaaaataggggattgcgtgaacacaagtcagtcaattatatata |
290 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
44722708 |
tagagagctagctttatcaaatgagatggtatctatttaaagcatacaaaataggggattgcatgaacacaagtcagtcaattatatata |
44722619 |
T |
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