View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19776_high_49 (Length: 255)
Name: NF19776_high_49
Description: NF19776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19776_high_49 |
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Alignment Details
Target: chr5 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 8 - 208
Target Start/End: Original strand, 3646296 - 3646496
Alignment:
| Q |
8 |
aagcgctaaaaacagaactgttaactgtgtattgtttgcttttacacaagttgtatgttccttgcatgttggaggacttaggcttggaattatagttgat |
107 |
Q |
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| T |
3646296 |
aagcgctaaaaacagaactgttaactgtgtattgtttgcttttacacaagttgtatgttccttgcatgttggaggacttaggcttggaattatagttgat |
3646395 |
T |
|
| Q |
108 |
atcatcaagagagcaacaccctattaaattatgaataaaactatcaaaattaaactcctaaattatcattattattataaactagcgttcaatttctccg |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
3646396 |
atcatcaagagagcaacaccctattaaattatgaataaaactatcaaaattaaactcctaaattatcattattattataaactagcgttcaatttctccg |
3646495 |
T |
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| Q |
208 |
c |
208 |
Q |
| |
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| |
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| T |
3646496 |
c |
3646496 |
T |
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