View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19776_high_55 (Length: 236)

Name: NF19776_high_55
Description: NF19776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19776_high_55
NF19776_high_55
[»] chr5 (18 HSPs)
chr5 (52-228)||(26368380-26368556)
chr5 (16-64)||(26894873-26894921)
chr5 (17-48)||(4902812-4902843)
chr5 (16-54)||(13660860-13660898)
chr5 (16-53)||(1265949-1265986)
chr5 (16-53)||(6673228-6673265)
chr5 (16-53)||(9828393-9828430)
chr5 (16-53)||(14913648-14913685)
chr5 (16-53)||(16127259-16127296)
chr5 (16-53)||(22527692-22527729)
chr5 (16-53)||(32147294-32147331)
chr5 (20-53)||(32147555-32147588)
chr5 (16-53)||(40004409-40004446)
chr5 (16-53)||(41641095-41641132)
chr5 (16-56)||(3497800-3497840)
chr5 (17-53)||(7951562-7951598)
chr5 (17-53)||(32964133-32964169)
chr5 (17-53)||(34662204-34662240)
[»] chr8 (22 HSPs)
chr8 (16-59)||(38878715-38878758)
chr8 (16-53)||(9035539-9035576)
chr8 (16-53)||(29598224-29598261)
chr8 (16-53)||(44251121-44251158)
chr8 (16-53)||(51095-51132)
chr8 (16-53)||(1774342-1774379)
chr8 (16-53)||(2944272-2944309)
chr8 (16-53)||(4631555-4631592)
chr8 (16-53)||(8251933-8251970)
chr8 (16-53)||(8951428-8951465)
chr8 (16-53)||(13153928-13153965)
chr8 (20-57)||(13154192-13154229)
chr8 (19-60)||(17856779-17856820)
chr8 (16-53)||(18754144-18754181)
chr8 (16-53)||(28192175-28192212)
chr8 (16-53)||(28572046-28572083)
chr8 (16-53)||(28579639-28579676)
chr8 (16-53)||(32675757-32675794)
chr8 (16-53)||(34568490-34568527)
chr8 (16-53)||(39029178-39029215)
chr8 (20-53)||(40741528-40741561)
chr8 (19-56)||(42885051-42885088)
[»] chr6 (13 HSPs)
chr6 (16-54)||(10195993-10196031)
chr6 (16-53)||(19097801-19097838)
chr6 (16-55)||(33487831-33487870)
chr6 (16-54)||(287414-287452)
chr6 (16-54)||(8743187-8743225)
chr6 (16-53)||(231105-231142)
chr6 (16-53)||(4844400-4844437)
chr6 (16-53)||(5457412-5457449)
chr6 (16-53)||(9388791-9388828)
chr6 (20-53)||(23397879-23397912)
chr6 (16-53)||(30248647-30248684)
chr6 (16-53)||(34301832-34301869)
chr6 (18-54)||(23398141-23398177)
[»] chr3 (27 HSPs)
chr3 (16-54)||(50647944-50647982)
chr3 (16-53)||(12683182-12683219)
chr3 (16-53)||(53361855-53361892)
chr3 (16-58)||(23700785-23700827)
chr3 (16-58)||(23719240-23719282)
chr3 (16-58)||(23737696-23737738)
chr3 (16-54)||(45252772-45252810)
chr3 (16-53)||(7181350-7181387)
chr3 (16-53)||(9499497-9499534)
chr3 (16-53)||(10220933-10220970)
chr3 (16-53)||(12050392-12050429)
chr3 (16-53)||(14428610-14428647)
chr3 (16-53)||(16435236-16435273)
chr3 (16-53)||(17699031-17699068)
chr3 (16-53)||(21756486-21756523)
chr3 (16-53)||(22103929-22103966)
chr3 (16-53)||(25149122-25149159)
chr3 (16-53)||(26593765-26593802)
chr3 (16-53)||(35868083-35868120)
chr3 (16-53)||(37728713-37728750)
chr3 (16-53)||(43868103-43868140)
chr3 (16-53)||(44543782-44543819)
chr3 (16-53)||(46049986-46050023)
chr3 (16-53)||(51284062-51284099)
chr3 (17-53)||(4024052-4024088)
chr3 (16-48)||(33976508-33976540)
chr3 (16-56)||(46878439-46878479)
[»] chr7 (23 HSPs)
chr7 (16-53)||(7449270-7449307)
chr7 (19-53)||(18113169-18113203)
chr7 (16-54)||(19920562-19920600)
chr7 (19-53)||(44510346-44510380)
chr7 (16-53)||(6387325-6387362)
chr7 (16-53)||(21295151-21295188)
chr7 (16-53)||(26255096-26255133)
chr7 (20-53)||(29176992-29177025)
chr7 (16-53)||(29286037-29286074)
chr7 (16-53)||(29643143-29643180)
chr7 (16-53)||(32814433-32814470)
chr7 (16-53)||(32872375-32872412)
chr7 (16-53)||(33858866-33858903)
chr7 (16-53)||(36698131-36698168)
chr7 (16-53)||(38858298-38858335)
chr7 (16-53)||(39197718-39197755)
chr7 (16-53)||(39871613-39871650)
chr7 (16-53)||(41026096-41026133)
chr7 (16-53)||(41252361-41252398)
chr7 (16-53)||(44547426-44547463)
chr7 (16-53)||(46415005-46415042)
chr7 (16-53)||(48521029-48521066)
chr7 (17-53)||(40300230-40300266)
[»] chr4 (27 HSPs)
chr4 (16-53)||(52870644-52870681)
chr4 (16-56)||(32032993-32033033)
chr4 (16-59)||(4035819-4035862)
chr4 (20-59)||(5743393-5743432)
chr4 (16-54)||(17339077-17339115)
chr4 (19-53)||(49228721-49228755)
chr4 (16-50)||(50424854-50424888)
chr4 (16-54)||(50533883-50533921)
chr4 (16-53)||(1859144-1859181)
chr4 (16-53)||(5375557-5375594)
chr4 (16-53)||(5743659-5743696)
chr4 (16-53)||(9328240-9328277)
chr4 (16-53)||(25708678-25708715)
chr4 (17-54)||(26626003-26626040)
chr4 (16-53)||(30771528-30771565)
chr4 (16-53)||(33413518-33413555)
chr4 (16-53)||(34273219-34273256)
chr4 (16-53)||(36990914-36990951)
chr4 (20-53)||(39144668-39144701)
chr4 (16-53)||(41191628-41191665)
chr4 (16-53)||(44294789-44294826)
chr4 (16-53)||(45742806-45742843)
chr4 (16-53)||(47806860-47806897)
chr4 (16-53)||(50352064-50352101)
chr4 (16-53)||(52977982-52978019)
chr4 (16-53)||(55632259-55632296)
chr4 (19-59)||(20391440-20391480)
[»] chr1 (23 HSPs)
chr1 (16-53)||(14171542-14171579)
chr1 (16-59)||(50008483-50008526)
chr1 (16-54)||(23541978-23542016)
chr1 (16-54)||(36694853-36694891)
chr1 (16-54)||(36710954-36710992)
chr1 (16-54)||(46075867-46075905)
chr1 (16-53)||(943637-943674)
chr1 (16-53)||(1039381-1039418)
chr1 (16-53)||(1046287-1046324)
chr1 (16-53)||(4102714-4102751)
chr1 (16-53)||(11741397-11741434)
chr1 (16-53)||(15811232-15811269)
chr1 (18-55)||(27669840-27669877)
chr1 (16-53)||(30290265-30290302)
chr1 (16-53)||(37951949-37951986)
chr1 (16-53)||(39363194-39363231)
chr1 (16-53)||(39497433-39497470)
chr1 (16-53)||(44649629-44649666)
chr1 (16-53)||(45039412-45039449)
chr1 (16-53)||(49907021-49907058)
chr1 (16-53)||(50937779-50937816)
chr1 (16-53)||(52431174-52431211)
chr1 (16-52)||(30289862-30289898)
[»] chr2 (16 HSPs)
chr2 (16-60)||(7116299-7116343)
chr2 (16-54)||(17408294-17408332)
chr2 (16-54)||(37229439-37229477)
chr2 (16-53)||(2438225-2438262)
chr2 (16-53)||(5664638-5664675)
chr2 (16-53)||(7491844-7491881)
chr2 (16-53)||(8716892-8716929)
chr2 (16-53)||(11201683-11201720)
chr2 (16-53)||(20252210-20252247)
chr2 (16-53)||(25624733-25624770)
chr2 (16-53)||(27560206-27560243)
chr2 (16-53)||(34062665-34062702)
chr2 (16-53)||(34883848-34883885)
chr2 (16-53)||(36131028-36131065)
chr2 (16-53)||(40607702-40607739)
chr2 (16-53)||(41450516-41450553)
[»] scaffold0604 (1 HSPs)
scaffold0604 (16-54)||(3782-3820)
[»] scaffold0002 (1 HSPs)
scaffold0002 (19-53)||(355042-355076)
[»] scaffold0122 (1 HSPs)
scaffold0122 (16-53)||(12065-12102)
[»] scaffold0029 (1 HSPs)
scaffold0029 (16-53)||(51682-51719)
[»] scaffold0025 (1 HSPs)
scaffold0025 (16-53)||(65637-65674)
[»] scaffold0012 (1 HSPs)
scaffold0012 (16-53)||(47640-47677)
[»] scaffold0008 (1 HSPs)
scaffold0008 (16-53)||(259122-259159)


Alignment Details
Target: chr5 (Bit Score: 161; Significance: 5e-86; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 52 - 228
Target Start/End: Original strand, 26368380 - 26368556
Alignment:
Q  52 tagattataaagtaattttgtacattcttatagaaatgaccaatggcaacaacaattgattccatttcaatcaactaacaacatggacatgaatttcaga 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  26368380 tagattataaagtaattttgtacattcttatagaaatgaccaatggcaacaacaatcgattccacttcaatcaactaacaacatggacatgaatttcaga 26368479  T
Q  152 gcttctactcactaatattctcttaaagcctttagtacgatatttatttttcatcccttctattcttcatattcttc 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  26368480 gcttctactcactaatattctcttaaagcctttagtacgatatttgtttttcatcccttctattcttcattttcttc 26368556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 26894873 - 26894921
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtagattataaagt 64  Q
    ||||||||| |||||||||||||| ||||||||||||| | ||||||||    
T  26894873 ttctcaaaagggtcttataattagggacggagggagtataatataaagt 26894921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 48
Target Start/End: Complemental strand, 4902843 - 4902812
Alignment:
Q  17 tctcaaaatggtcttataattagagacggagg 48  Q
    ||||||||||||||||||||||||||||||||    
T  4902843 tctcaaaatggtcttataattagagacggagg 4902812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 13660898 - 13660860
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  13660898 ttctcaaaaggatcttataattagagacggagggagtag 13660860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 1265986 - 1265949
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  1265986 ttctcaaaagggtcttataattagggacggagggagta 1265949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 6673228 - 6673265
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  6673228 ttctcaaaagggtcttataattagggacggagggagta 6673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 9828430 - 9828393
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  9828430 ttctcaaaagggtcttataattagggacggagggagta 9828393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 14913685 - 14913648
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  14913685 ttctcaaaagggtcttataattagggacggagggagta 14913648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 16127296 - 16127259
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  16127296 ttctcaaaagggtcttataattagggacggagggagta 16127259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 22527729 - 22527692
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  22527729 ttctcaaaagggtcttataattagggacggagggagta 22527692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 32147331 - 32147294
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  32147331 ttctcaaaaaggtcttataattagggacggagggagta 32147294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 32147555 - 32147588
Alignment:
Q  20 caaaatggtcttataattagagacggagggagta 53  Q
    ||||| ||||||||||||||||||||||||||||    
T  32147555 caaaagggtcttataattagagacggagggagta 32147588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 40004409 - 40004446
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  40004409 ttctcaaaagggtcttataattagggacggagggagta 40004446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 41641132 - 41641095
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  41641132 ttctcaaaatgatcttataattagggacggagggagta 41641095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 3497800 - 3497840
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtagat 56  Q
    ||||||||| ||||||||||||||  |||||||||||||||    
T  3497800 ttctcaaaagggtcttataattaggaacggagggagtagat 3497840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 7951598 - 7951562
Alignment:
Q  17 tctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||| |||||||||||||| |||||||||||||    
T  7951598 tctcaaaagggtcttataattagggacggagggagta 7951562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 32964169 - 32964133
Alignment:
Q  17 tctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  32964169 tctcaaaatggtcttataattagggacggaggtagta 32964133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 34662240 - 34662204
Alignment:
Q  17 tctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||| |||||||||||||| |||||||||||||    
T  34662240 tctcaaaagggtcttataattagggacggagggagta 34662204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 38878758 - 38878715
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtagattat 59  Q
    ||||||||| |||||||||||||||||||||||||||| |||||    
T  38878758 ttctcaaaagggtcttataattagagacggagggagtacattat 38878715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 9035539 - 9035576
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||||||||||||||||||| |||||||||||||    
T  9035539 ttctcaaaatggtcttataattagggacggagggagta 9035576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 29598261 - 29598224
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  29598261 ttctcaaaagggtcttataattagagacggagggagta 29598224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 44251121 - 44251158
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||||||||||||||||||| |||||||||||||    
T  44251121 ttctcaaaatggtcttataattagggacggagggagta 44251158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 51095 - 51132
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  51095 ttctcaaaagggtcttataattagggacggagggagta 51132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 1774379 - 1774342
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  1774379 ttctcaaaagggtcttataattagggacggagggagta 1774342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 2944272 - 2944309
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  2944272 ttctcaaaagggtcttataattagggacggagggagta 2944309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 4631555 - 4631592
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||||||||||||||||||| |||||| ||||||    
T  4631555 ttctcaaaatggtcttataattagggacggatggagta 4631592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 8251933 - 8251970
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  8251933 ttctcaaaagggtcttataattagggacggagggagta 8251970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 8951428 - 8951465
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  8951428 ttctcaaaagggtcttataattagggacggagggagta 8951465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 13153965 - 13153928
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  13153965 ttctcaaaagggtcttataattagggacggagggagta 13153928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 13154192 - 13154229
Alignment:
Q  20 caaaatggtcttataattagagacggagggagtagatt 57  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  13154192 caaaagggtcttataattagggacggagggagtagatt 13154229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 17856779 - 17856820
Alignment:
Q  19 tcaaaatggtcttataattagagacggagggagtagattata 60  Q
    |||||| |||||||||||||| ||||||||||||| ||||||    
T  17856779 tcaaaagggtcttataattagggacggagggagtatattata 17856820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 18754181 - 18754144
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  18754181 ttctcaaaagggtcttataattagggacggagggagta 18754144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 28192175 - 28192212
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  28192175 ttctcaaaagggtcttataattagggacggagggagta 28192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 28572083 - 28572046
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  28572083 ttctcaaaagggtcttataattagggacggagggagta 28572046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 28579676 - 28579639
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  28579676 ttctcaaaagggtcttataattagggacggagggagta 28579639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 32675757 - 32675794
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  32675757 ttctcaaaagggtcttataattagggacggagggagta 32675794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 34568527 - 34568490
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  34568527 ttctcaaaagggtcttataattagggacggagggagta 34568490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 39029215 - 39029178
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  39029215 ttctcaaaagggtcttataattagggacggagggagta 39029178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 40741528 - 40741561
Alignment:
Q  20 caaaatggtcttataattagagacggagggagta 53  Q
    |||||||||||||||||||| |||||||||||||    
T  40741528 caaaatggtcttataattagggacggagggagta 40741561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 42885088 - 42885051
Alignment:
Q  19 tcaaaatggtcttataattagagacggagggagtagat 56  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  42885088 tcaaaagggtcttataattagggacggagggagtagat 42885051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 10195993 - 10196031
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  10195993 ttctcaaaagggtcttataattagagacggagggagtag 10196031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 19097801 - 19097838
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  19097801 ttctcaaaagggtcttataattagagacggagggagta 19097838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 33487870 - 33487831
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtaga 55  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  33487870 ttctcaaaaaggtcttataattagggacggagggagtaga 33487831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 287414 - 287452
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  287414 ttctcaaaaaggtcttataattagggacggagggagtag 287452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 8743225 - 8743187
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  8743225 ttctcaaaagggtcttataattagggacggagggagtag 8743187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 231105 - 231142
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  231105 ttctcaaaagggtcttataattagggacggagggagta 231142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 4844437 - 4844400
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  4844437 ttctcaaaagggtcttataattagggacggagggagta 4844400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 5457449 - 5457412
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  5457449 ttctcaaaaaggtcttataattagggacggagggagta 5457412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 9388791 - 9388828
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  9388791 ttctcaaaaaggtcttataattagggacggagggagta 9388828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 23397912 - 23397879
Alignment:
Q  20 caaaatggtcttataattagagacggagggagta 53  Q
    |||||||||||||||||||| |||||||||||||    
T  23397912 caaaatggtcttataattagggacggagggagta 23397879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 30248684 - 30248647
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  30248684 ttctcaaaagggtcttataattagggacggagggagta 30248647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 34301832 - 34301869
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  34301832 ttctcaaaagggtcttataattagggacggagggagta 34301869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 23398141 - 23398177
Alignment:
Q  18 ctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  23398141 ctcaaaagggtcttataattagggacggagggagtag 23398177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000008; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 50647944 - 50647982
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  50647944 ttctcaaaagggtcttataattagagacggagggagtag 50647982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 12683182 - 12683219
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||||||||||||||||||| |||||||||||||    
T  12683182 ttctcaaaatggtcttataattagggacggagggagta 12683219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 53361855 - 53361892
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||||||||||||||||||| |||||||||||||    
T  53361855 ttctcaaaatggtcttataattagggacggagggagta 53361892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 23700785 - 23700827
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtagatta 58  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||    
T  23700785 ttctcaaaaaggtcttataattagggacggagggagtatatta 23700827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 23719240 - 23719282
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtagatta 58  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||    
T  23719240 ttctcaaaaaggtcttataattagggacggagggagtatatta 23719282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Original strand, 23737696 - 23737738
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtagatta 58  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||    
T  23737696 ttctcaaaaaggtcttataattagggacggagggagtatatta 23737738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 45252810 - 45252772
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  45252810 ttctcaaaagggtcttataattagggacggagggagtag 45252772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 7181387 - 7181350
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  7181387 ttctcaaaagggtcttataattagggacggagggagta 7181350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 9499497 - 9499534
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  9499497 ttctcaaaagggtcttataattagggacggagggagta 9499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 10220970 - 10220933
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  10220970 ttctcaaaagggtcttataattagggacggagggagta 10220933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 12050392 - 12050429
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  12050392 ttctcaaaagggtcttataattagggacggagggagta 12050429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 14428647 - 14428610
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  14428647 ttctcaaaagggtcttataattagggacggagggagta 14428610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 16435236 - 16435273
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  16435236 ttctcaaaaggatcttataattagagacggagggagta 16435273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 17699031 - 17699068
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  17699031 ttctcaaaatggtcttataattagggacggaggtagta 17699068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 21756523 - 21756486
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  21756523 ttctcaaaagggtcttataattagggacggagggagta 21756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 22103929 - 22103966
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  22103929 ttctcaaaagggtcttataattagggacggagggagta 22103966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 25149122 - 25149159
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  25149122 ttctcaaaagggtcttataattagggacggagggagta 25149159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 26593765 - 26593802
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  26593765 ttctcaaaagggtcttataattagggacggagggagta 26593802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 35868083 - 35868120
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  35868083 ttctcaaaagggtcttataattagggacggagggagta 35868120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 37728750 - 37728713
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  37728750 ttctcaaaagggtcttataattagggacggagggagta 37728713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 43868140 - 43868103
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  43868140 ttctcaaaagggtcttataattagggacggagggagta 43868103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 44543819 - 44543782
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  44543819 ttctcaaaagggtcttataattagggacggagggagta 44543782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 46049986 - 46050023
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  46049986 ttctcaaaagggtcttataattagggacggagggagta 46050023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 51284062 - 51284099
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  51284062 ttctcaaaagggtcttataattagggacggagggagta 51284099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 4024088 - 4024052
Alignment:
Q  17 tctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||| |||||||||||||| |||||||||||||    
T  4024088 tctcaaaagggtcttataattagggacggagggagta 4024052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 48
Target Start/End: Complemental strand, 33976540 - 33976508
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagg 48  Q
    |||||||||||||||||||||||| ||||||||    
T  33976540 ttctcaaaatggtcttataattagggacggagg 33976508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 46878439 - 46878479
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtagat 56  Q
    ||||||||| |||||||||||||  ||||||||||||||||    
T  46878439 ttctcaaaagggtcttataattaaggacggagggagtagat 46878479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 7449307 - 7449270
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||||||||||||||||||| |||||||||||||    
T  7449307 ttctcaaaatggtcttataattagggacggagggagta 7449270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 18113169 - 18113203
Alignment:
Q  19 tcaaaatggtcttataattagagacggagggagta 53  Q
    |||||| ||||||||||||||||||||||||||||    
T  18113169 tcaaaagggtcttataattagagacggagggagta 18113203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 19920600 - 19920562
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  19920600 ttctcaaaagggtcttataattagggacggagggagtag 19920562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 44510346 - 44510380
Alignment:
Q  19 tcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||||||||||||||| |||||||||||||    
T  44510346 tcaaaatggtcttataattagggacggagggagta 44510380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 6387362 - 6387325
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||||  |||||||||||||||||||||||||||    
T  6387362 ttctcaaaagagtcttataattagagacggagggagta 6387325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 21295188 - 21295151
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  21295188 ttctcaaaagggtcttataattagggacggagggagta 21295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 26255133 - 26255096
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  26255133 ttctcaaaagggtcttataattagggacggagggagta 26255096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 29177025 - 29176992
Alignment:
Q  20 caaaatggtcttataattagagacggagggagta 53  Q
    ||||| ||||||||||||||||||||||||||||    
T  29177025 caaaagggtcttataattagagacggagggagta 29176992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 29286037 - 29286074
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  29286037 ttctcaaaagggtcttataattagggacggagggagta 29286074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 29643143 - 29643180
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  29643143 ttctcaaaagggtcttataattagagatggagggagta 29643180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 32814470 - 32814433
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  32814470 ttctcaaaagggtcttataattagggacggagggagta 32814433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 32872375 - 32872412
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  32872375 ttctcaaaagggtcttataattagggacggagggagta 32872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 33858866 - 33858903
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  33858866 ttctcaaaagggtcttataattagggacggagggagta 33858903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 36698131 - 36698168
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  36698131 ttctcaaaagggtcttataattagggacggagggagta 36698168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 38858335 - 38858298
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  38858335 ttctcaaaagggtcttataattagggacggagggagta 38858298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 39197755 - 39197718
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  39197755 ttctcaaaagggtcttataattagggacggagggagta 39197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 39871613 - 39871650
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  39871613 ttctcaaaagggtcttataattagggacggagggagta 39871650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 41026096 - 41026133
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  41026096 ttctcaaaagggtcttataattagggacggagggagta 41026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 41252361 - 41252398
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  41252361 ttctcaaaagggtcttataattagggacggagggagta 41252398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 44547463 - 44547426
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  44547463 ttctcaaaaaggtcttataattagggacggagggagta 44547426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 46415005 - 46415042
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  46415005 ttctcaaaatggtcttataattagggacggaggtagta 46415042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 48521066 - 48521029
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  48521066 ttctcaaaagggtcttataattagggacggagggagta 48521029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 40300266 - 40300230
Alignment:
Q  17 tctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||| |||||||||||||| |||||||||||||    
T  40300266 tctcaaaagggtcttataattagggacggagggagta 40300230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 52870681 - 52870644
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  52870681 ttctcaaaagggtcttataattagagacggagggagta 52870644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 32032993 - 32033033
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtagat 56  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  32032993 ttctcaaaagggtcttataattagggacggagggagtagat 32033033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 4035862 - 4035819
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtagattat 59  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||    
T  4035862 ttctcaaaagggtcttataattagggacggagggagtatattat 4035819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 5743432 - 5743393
Alignment:
Q  20 caaaatggtcttataattagagacggagggagtagattat 59  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  5743432 caaaatggtcttataattagggacggagggagtagtttat 5743393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 17339115 - 17339077
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  17339115 ttctcaaaagggtcttataattagagacggaggtagtag 17339077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 49228721 - 49228755
Alignment:
Q  19 tcaaaatggtcttataattagagacggagggagta 53  Q
    |||||| ||||||||||||||||||||||||||||    
T  49228721 tcaaaagggtcttataattagagacggagggagta 49228755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 50424854 - 50424888
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggaggga 50  Q
    ||||||||| |||||||||||||||||||||||||    
T  50424854 ttctcaaaagggtcttataattagagacggaggga 50424888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 50533921 - 50533883
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  50533921 ttctcaaaatgatcttataattagggacggagggagtag 50533883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 1859181 - 1859144
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  1859181 ttctcaaaaaggtcttataattagggacggagggagta 1859144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 5375557 - 5375594
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  5375557 ttctcaaaagggtcttataattagggacggagggagta 5375594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 5743659 - 5743696
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  5743659 ttctcaaaagggtcttataattagggacggagggagta 5743696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 9328240 - 9328277
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  9328240 ttctcaaaagggtcttataattagggacggagggagta 9328277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 25708678 - 25708715
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  25708678 ttctcaaaaaggtcttataattagggacggagggagta 25708715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 26626003 - 26626040
Alignment:
Q  17 tctcaaaatggtcttataattagagacggagggagtag 54  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  26626003 tctcaaaagggtcttataattagggacggagggagtag 26626040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 30771565 - 30771528
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  30771565 ttctcaaaagggtcttataattagggacggagggagta 30771528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 33413555 - 33413518
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  33413555 ttctcaaaagggtcttataattagggacggagggagta 33413518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 34273219 - 34273256
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  34273219 ttctcaaaagggtcttataattagggacggagggagta 34273256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 36990951 - 36990914
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  36990951 ttctcaaaaaggtcttataattagagacggaggtagta 36990914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 39144668 - 39144701
Alignment:
Q  20 caaaatggtcttataattagagacggagggagta 53  Q
    ||||| ||||||||||||||||||||||||||||    
T  39144668 caaaaaggtcttataattagagacggagggagta 39144701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 41191628 - 41191665
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  41191628 ttctcaaaagggtcttataattagagacggaggtagta 41191665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 44294826 - 44294789
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  44294826 ttctcaaaagggtcttataattagggacggagggagta 44294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 45742806 - 45742843
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  45742806 ttctcaaaagggtcttataattagggacggagggagta 45742843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 47806897 - 47806860
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  47806897 ttctcaaaagggtcttataattagggacggagggagta 47806860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 50352101 - 50352064
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  50352101 ttctcaaaaggatcttataattagagacggagggagta 50352064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 52978019 - 52977982
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  52978019 ttctcaaaagggtcttataattagggacggagggagta 52977982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 55632259 - 55632296
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  55632259 ttctcaaaaggatcttataattagagacggagggagta 55632296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 20391440 - 20391480
Alignment:
Q  19 tcaaaatggtcttataattagagacggagggagtagattat 59  Q
    |||||| |||||||||||||| |||||||||||||| ||||    
T  20391440 tcaaaagggtcttataattagggacggagggagtagtttat 20391480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 14171579 - 14171542
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  14171579 ttctcaaaagggtcttataattagagacggagggagta 14171542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 50008483 - 50008526
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtagattat 59  Q
    ||||||||||| |||||||||||| ||||||||||||| |||||    
T  50008483 ttctcaaaatgatcttataattagggacggagggagtatattat 50008526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 23542016 - 23541978
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  23542016 ttctcaaaagggtcttataattagggacggagggagtag 23541978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 36694891 - 36694853
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  36694891 ttctcaaaagggtcttataattagggacggagggagtag 36694853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 36710992 - 36710954
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  36710992 ttctcaaaagggtcttataattagggacggagggagtag 36710954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 46075867 - 46075905
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  46075867 ttctcaaaagggtcttataattagggacggagggagtag 46075905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 943637 - 943674
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  943637 ttctcaaaagggtcttataattagggacggagggagta 943674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 1039381 - 1039418
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  1039381 ttctcaaaagggtcttataattagggacggagggagta 1039418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 1046287 - 1046324
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  1046287 ttctcaaaagggtcttataattagggacggagggagta 1046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 4102714 - 4102751
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  4102714 ttctcaaaagggtcttataattagggacggagggagta 4102751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 11741434 - 11741397
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  11741434 ttctcaaaagggtcttataattagggacggagggagta 11741397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 15811232 - 15811269
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  15811232 ttctcaaaagggtcttataattagggacggagggagta 15811269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 27669877 - 27669840
Alignment:
Q  18 ctcaaaatggtcttataattagagacggagggagtaga 55  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  27669877 ctcaaaatggacttataattagagacggaggtagtaga 27669840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 30290302 - 30290265
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  30290302 ttctcaaaagggtcttataattagggacggagggagta 30290265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 37951949 - 37951986
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  37951949 ttctcaaaagggtcttataattagggacggagggagta 37951986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 39363194 - 39363231
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  39363194 ttctcaaaagggtcttataattagggacggagggagta 39363231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 39497470 - 39497433
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  39497470 ttctcaaaagggtcttataattagggacggagggagta 39497433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 44649666 - 44649629
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  44649666 ttctcaaaagggtcttataattagggacggagggagta 44649629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 45039449 - 45039412
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  45039449 ttctcaaaagggtcttataattagggacggagggagta 45039412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 49907058 - 49907021
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  49907058 ttctcaaaagggtcttataattagggacggagggagta 49907021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 50937816 - 50937779
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    |||||||||||||||||||||||| |||||||| ||||    
T  50937816 ttctcaaaatggtcttataattagggacggaggtagta 50937779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 52431174 - 52431211
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  52431174 ttctcaaaagggtcttataattagggacggagggagta 52431211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 30289862 - 30289898
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagt 52  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  30289862 ttctcaaaagggtcttataattagggacggagggagt 30289898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 7116299 - 7116343
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtagattata 60  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||    
T  7116299 ttctcaaaagggtcttataattagggacggaggtagtagattata 7116343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 17408294 - 17408332
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  17408294 ttctcaaaagggtcttataattagggacggagggagtag 17408332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 37229477 - 37229439
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  37229477 ttctcaaaatggtcttataattagggacggaaggagtag 37229439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 2438262 - 2438225
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  2438262 ttctcaaaagggtcttataattagggacggagggagta 2438225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 5664675 - 5664638
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  5664675 ttctcaaaaaggtcttataattagggacggagggagta 5664638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 7491881 - 7491844
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  7491881 ttctcaaaagggtcttataattagggacggagggagta 7491844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 8716892 - 8716929
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  8716892 ttctcaaaagggtcttataattagggacggagggagta 8716929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 11201720 - 11201683
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  11201720 ttctcaaaagggtcttataattagggacggagggagta 11201683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 20252247 - 20252210
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  20252247 ttctcaaaagggtcttataattagggacggagggagta 20252210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 25624770 - 25624733
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  25624770 ttctcaaaaaggtcttataattagggacggagggagta 25624733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 27560243 - 27560206
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  27560243 ttctcaaaagggtcttataattagggacggagggagta 27560206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 34062665 - 34062702
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  34062665 ttctcaaaagggtcttataattagggacggagggagta 34062702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 34883848 - 34883885
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  34883848 ttctcaaaagggtcttataattagggacggagggagta 34883885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 36131028 - 36131065
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  36131028 ttctcaaaagggtcttataattagggacggagggagta 36131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 40607739 - 40607702
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  40607739 ttctcaaaagggtcttataattagggacggagggagta 40607702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 41450553 - 41450516
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  41450553 ttctcaaaagggtcttataattagggacggagggagta 41450516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 3782 - 3820
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagtag 54  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  3782 ttctcaaaagggtcttataattagggacggagggagtag 3820  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Complemental strand, 355076 - 355042
Alignment:
Q  19 tcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||||| |||||||||||||||||||||||    
T  355076 tcaaaatggtcctataattagagacggagggagta 355042  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 12102 - 12065
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  12102 ttctcaaaagggtcttataattagggacggagggagta 12065  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 51682 - 51719
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  51682 ttctcaaaagggtcttataattagggacggagggagta 51719  T

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Target: scaffold0025 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 65637 - 65674
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  65637 ttctcaaaaaggtcttataattagggacggagggagta 65674  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 47677 - 47640
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  47677 ttctcaaaagggtcttataattagggacggagggagta 47640  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 259122 - 259159
Alignment:
Q  16 ttctcaaaatggtcttataattagagacggagggagta 53  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  259122 ttctcaaaagggtcttataattagggacggagggagta 259159  T

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