View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19776_low_44 (Length: 293)
Name: NF19776_low_44
Description: NF19776
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19776_low_44 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 25885801 - 25886086
Alignment:
| Q |
1 |
ttcctatctggaatttgtccctttagcttctgttttgaaatcagcaattttttgacaaaggtcatcatcatcacaagtctcaccttatcttcgaatgacc |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25885801 |
ttcctatctggaatttgtccctttagcttctgttttgaagtcagcaattttttgacaaaggtcatcatcatcacaagtctcaccttatcttcgaatgacc |
25885900 |
T |
|
| Q |
101 |
aagaaatttaataaattatgtttaaattttgttgcaatctcattcactccagaatctgatcacaaggattcacattagctagtgctattgttacttaatt |
200 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |
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| T |
25885901 |
aagaaatttaataaattatgtttaaactttgttgcaatctcattcactccagaatctgatcacaaggattcacattagccagtgttattgttacttaatt |
25886000 |
T |
|
| Q |
201 |
ggaaaattcatatgtaatatggtgtataagaaattttattcaatgtctccattatcaatgataactagttttacaagttcttctct |
286 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25886001 |
ggaaaattcatatgtaatatggtgtataagaaattttattcaatgtctccattatcaatgataactagttttacaagttcttctct |
25886086 |
T |
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