View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19779_low_14 (Length: 207)

Name: NF19779_low_14
Description: NF19779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19779_low_14
NF19779_low_14
[»] scaffold1095 (1 HSPs)
scaffold1095 (100-132)||(1676-1708)
[»] chr8 (16 HSPs)
chr8 (100-132)||(2209217-2209249)
chr8 (100-132)||(10806302-10806334)
chr8 (100-132)||(11998932-11998964)
chr8 (100-132)||(16889399-16889431)
chr8 (100-132)||(33113788-33113820)
chr8 (100-132)||(33114039-33114071)
chr8 (100-132)||(38778655-38778687)
chr8 (101-132)||(35237462-35237493)
chr8 (100-131)||(40309345-40309376)
chr8 (100-131)||(43481123-43481154)
chr8 (101-131)||(30115568-30115598)
chr8 (102-132)||(43591463-43591493)
chr8 (102-131)||(40907791-40907820)
chr8 (100-132)||(39852644-39852676)
chr8 (100-132)||(43480829-43480861)
chr8 (100-132)||(44062439-44062471)
[»] chr7 (22 HSPs)
chr7 (100-132)||(24323834-24323866)
chr7 (100-132)||(27855767-27855799)
chr7 (100-132)||(32499457-32499489)
chr7 (100-132)||(32499709-32499741)
chr7 (100-132)||(33806172-33806204)
chr7 (100-132)||(42456102-42456134)
chr7 (100-132)||(42456354-42456386)
chr7 (101-132)||(4894704-4894735)
chr7 (100-131)||(19816467-19816498)
chr7 (101-132)||(22275929-22275960)
chr7 (101-132)||(24043895-24043926)
chr7 (101-132)||(27855985-27856016)
chr7 (101-132)||(34853594-34853625)
chr7 (101-132)||(36620581-36620612)
chr7 (101-132)||(36683048-36683079)
chr7 (101-132)||(46732783-46732814)
chr7 (102-132)||(4894935-4894965)
chr7 (102-132)||(34853842-34853872)
chr7 (102-131)||(18521317-18521346)
chr7 (102-131)||(30711981-30712010)
chr7 (100-132)||(36683316-36683348)
chr7 (100-132)||(47814486-47814518)
[»] chr6 (11 HSPs)
chr6 (100-132)||(5523414-5523446)
chr6 (100-132)||(6032605-6032637)
chr6 (101-132)||(6032349-6032380)
chr6 (101-132)||(33648013-33648044)
chr6 (101-132)||(33668426-33668457)
chr6 (100-131)||(33668674-33668705)
chr6 (101-131)||(12809556-12809586)
chr6 (102-132)||(30611200-30611230)
chr6 (101-130)||(13944485-13944514)
chr6 (100-132)||(12809263-12809295)
chr6 (100-132)||(30610924-30610956)
[»] chr5 (8 HSPs)
chr5 (100-132)||(3739204-3739236)
chr5 (100-132)||(3739515-3739547)
chr5 (100-132)||(8813532-8813564)
chr5 (101-132)||(4929083-4929114)
chr5 (100-131)||(4929359-4929390)
chr5 (101-132)||(8813258-8813289)
chr5 (101-131)||(28075810-28075840)
chr5 (100-132)||(42408416-42408448)
[»] chr4 (28 HSPs)
chr4 (100-132)||(12640437-12640469)
chr4 (100-132)||(20422582-20422614)
chr4 (100-132)||(25369985-25370017)
chr4 (100-132)||(28223757-28223789)
chr4 (100-132)||(31877292-31877324)
chr4 (100-132)||(35427732-35427764)
chr4 (100-132)||(40847868-40847900)
chr4 (100-132)||(40847980-40848012)
chr4 (100-132)||(48090948-48090980)
chr4 (101-132)||(6862854-6862885)
chr4 (101-132)||(20422331-20422362)
chr4 (101-132)||(32291228-32291259)
chr4 (101-132)||(32902315-32902346)
chr4 (101-132)||(35427447-35427478)
chr4 (101-132)||(36111070-36111101)
chr4 (101-132)||(37567067-37567098)
chr4 (101-132)||(40344707-40344738)
chr4 (101-132)||(48781687-48781718)
chr4 (101-132)||(48781924-48781955)
chr4 (101-131)||(3709265-3709295)
chr4 (101-131)||(20075739-20075769)
chr4 (101-131)||(32902055-32902085)
chr4 (102-132)||(55816293-55816323)
chr4 (100-132)||(389246-389278)
chr4 (100-132)||(3708976-3709008)
chr4 (100-132)||(26423961-26423993)
chr4 (100-132)||(36944813-36944845)
chr4 (100-132)||(40344999-40345031)
[»] chr3 (29 HSPs)
chr3 (100-132)||(23584724-23584756)
chr3 (100-132)||(23599547-23599579)
chr3 (100-132)||(29342545-29342577)
chr3 (100-132)||(37375313-37375345)
chr3 (100-132)||(44868460-44868492)
chr3 (100-132)||(48218794-48218826)
chr3 (101-132)||(8427584-8427615)
chr3 (101-132)||(25025379-25025410)
chr3 (101-132)||(29342834-29342865)
chr3 (101-132)||(32672368-32672399)
chr3 (101-132)||(37374169-37374200)
chr3 (101-132)||(43104096-43104127)
chr3 (100-131)||(43658747-43658778)
chr3 (101-132)||(48219087-48219118)
chr3 (101-132)||(49752478-49752509)
chr3 (100-131)||(50687289-50687320)
chr3 (101-131)||(3945099-3945129)
chr3 (101-131)||(19555773-19555803)
chr3 (101-131)||(32672626-32672656)
chr3 (101-131)||(38575233-38575263)
chr3 (102-132)||(43658429-43658459)
chr3 (100-129)||(40887487-40887516)
chr3 (100-132)||(3945384-3945416)
chr3 (101-129)||(37374471-37374499)
chr3 (100-132)||(38575494-38575526)
chr3 (100-132)||(41875466-41875498)
chr3 (100-132)||(42356448-42356480)
chr3 (100-132)||(47737256-47737288)
chr3 (100-132)||(50687558-50687590)
[»] chr2 (13 HSPs)
chr2 (100-132)||(7583336-7583368)
chr2 (100-132)||(7716876-7716908)
chr2 (100-132)||(8112879-8112911)
chr2 (100-132)||(28223991-28224023)
chr2 (101-132)||(3595757-3595788)
chr2 (101-132)||(17918528-17918559)
chr2 (101-132)||(28224229-28224260)
chr2 (101-132)||(30162146-30162177)
chr2 (101-132)||(39477168-39477199)
chr2 (102-132)||(16571312-16571342)
chr2 (100-132)||(3595457-3595489)
chr2 (100-132)||(4386800-4386832)
chr2 (100-132)||(11256319-11256351)
[»] chr1 (19 HSPs)
chr1 (100-132)||(43368393-43368425)
chr1 (100-132)||(49534246-49534278)
chr1 (100-132)||(51248334-51248366)
chr1 (101-132)||(8560359-8560390)
chr1 (101-132)||(41563641-41563672)
chr1 (101-132)||(43368685-43368716)
chr1 (101-132)||(48843826-48843857)
chr1 (101-132)||(52859638-52859669)
chr1 (100-130)||(6288055-6288085)
chr1 (101-131)||(7219500-7219530)
chr1 (102-132)||(27797583-27797613)
chr1 (102-132)||(42839147-42839177)
chr1 (102-132)||(42839910-42839940)
chr1 (102-132)||(52859362-52859392)
chr1 (100-132)||(1403243-1403275)
chr1 (100-132)||(7219212-7219244)
chr1 (100-132)||(42839411-42839443)
chr1 (100-132)||(42840165-42840197)
chr1 (104-132)||(48843778-48843806)
[»] scaffold0368 (1 HSPs)
scaffold0368 (102-132)||(11631-11661)


Alignment Details
Target: scaffold1095 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 1676 - 1708
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  1676 aaaattctgtaattcatttattgaatgttagaa 1708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 2209217 - 2209249
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  2209217 aaaattctgtaattcatttattgaatgttagaa 2209249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 10806334 - 10806302
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  10806334 aaaattctgtaattcatttattgaatgttagaa 10806302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 11998964 - 11998932
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  11998964 aaaattctgtaattcatttattgaatgttagaa 11998932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 16889399 - 16889431
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  16889399 aaaattctgtaattcatttattgaatgttagaa 16889431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 33113788 - 33113820
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  33113788 aaaattctgtaattcatttattgaatgttagaa 33113820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 33114071 - 33114039
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  33114071 aaaattctgtaattcatttattgaatgttagaa 33114039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 38778687 - 38778655
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  38778687 aaaattctgtaattcatttattgaatgttagaa 38778655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 35237462 - 35237493
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  35237462 aaattctgtaattcatttattgaatgttagaa 35237493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 131
Target Start/End: Complemental strand, 40309376 - 40309345
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttaga 131  Q
    ||||||||||||||||||||||||||||||||    
T  40309376 aaaattctgtaattcatttattgaatgttaga 40309345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 131
Target Start/End: Complemental strand, 43481154 - 43481123
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttaga 131  Q
    ||||||||||||||||||||||||||||||||    
T  43481154 aaaattctgtaattcatttattgaatgttaga 43481123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 131
Target Start/End: Original strand, 30115568 - 30115598
Alignment:
Q  101 aaattctgtaattcatttattgaatgttaga 131  Q
    |||||||||||||||||||||||||||||||    
T  30115568 aaattctgtaattcatttattgaatgttaga 30115598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 43591493 - 43591463
Alignment:
Q  102 aattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||    
T  43591493 aattctgtaattcatttattgaatgttagaa 43591463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 131
Target Start/End: Original strand, 40907791 - 40907820
Alignment:
Q  102 aattctgtaattcatttattgaatgttaga 131  Q
    ||||||||||||||||||||||||||||||    
T  40907791 aattctgtaattcatttattgaatgttaga 40907820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 39852676 - 39852644
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||| ||||||||||||||||||||||||||    
T  39852676 aaaattatgtaattcatttattgaatgttagaa 39852644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 43480829 - 43480861
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||| |||||||||||||||||||||||||    
T  43480829 aaaattcagtaattcatttattgaatgttagaa 43480861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 44062471 - 44062439
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||| |||||||||||||||||||||    
T  44062471 aaaattctgtatttcatttattgaatgttagaa 44062439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 24323866 - 24323834
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  24323866 aaaattctgtaattcatttattgaatgttagaa 24323834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 27855767 - 27855799
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  27855767 aaaattctgtaattcatttattgaatgttagaa 27855799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 32499457 - 32499489
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  32499457 aaaattctgtaattcatttattgaatgttagaa 32499489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 32499741 - 32499709
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  32499741 aaaattctgtaattcatttattgaatgttagaa 32499709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 33806172 - 33806204
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  33806172 aaaattctgtaattcatttattgaatgttagaa 33806204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 42456102 - 42456134
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  42456102 aaaattctgtaattcatttattgaatgttagaa 42456134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 42456386 - 42456354
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  42456386 aaaattctgtaattcatttattgaatgttagaa 42456354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 4894704 - 4894735
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  4894704 aaattctgtaattcatttattgaatgttagaa 4894735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 131
Target Start/End: Original strand, 19816467 - 19816498
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttaga 131  Q
    ||||||||||||||||||||||||||||||||    
T  19816467 aaaattctgtaattcatttattgaatgttaga 19816498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 22275960 - 22275929
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  22275960 aaattctgtaattcatttattgaatgttagaa 22275929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 24043926 - 24043895
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  24043926 aaattctgtaattcatttattgaatgttagaa 24043895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 27856016 - 27855985
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  27856016 aaattctgtaattcatttattgaatgttagaa 27855985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 34853594 - 34853625
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  34853594 aaattctgtaattcatttattgaatgttagaa 34853625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 36620612 - 36620581
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  36620612 aaattctgtaattcatttattgaatgttagaa 36620581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 36683048 - 36683079
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  36683048 aaattctgtaattcatttattgaatgttagaa 36683079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 46732783 - 46732814
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  46732783 aaattctgtaattcatttattgaatgttagaa 46732814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 4894965 - 4894935
Alignment:
Q  102 aattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||    
T  4894965 aattctgtaattcatttattgaatgttagaa 4894935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 34853872 - 34853842
Alignment:
Q  102 aattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||    
T  34853872 aattctgtaattcatttattgaatgttagaa 34853842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 131
Target Start/End: Complemental strand, 18521346 - 18521317
Alignment:
Q  102 aattctgtaattcatttattgaatgttaga 131  Q
    ||||||||||||||||||||||||||||||    
T  18521346 aattctgtaattcatttattgaatgttaga 18521317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 102 - 131
Target Start/End: Original strand, 30711981 - 30712010
Alignment:
Q  102 aattctgtaattcatttattgaatgttaga 131  Q
    ||||||||||||||||||||||||||||||    
T  30711981 aattctgtaattcatttattgaatgttaga 30712010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 36683348 - 36683316
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||| ||||||||||||||||||||||||||    
T  36683348 aaaattttgtaattcatttattgaatgttagaa 36683316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 47814518 - 47814486
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||| ||||||||||||||||||||||||||    
T  47814518 aaaattttgtaattcatttattgaatgttagaa 47814486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 5523414 - 5523446
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  5523414 aaaattctgtaattcatttattgaatgttagaa 5523446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 6032637 - 6032605
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  6032637 aaaattctgtaattcatttattgaatgttagaa 6032605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 6032349 - 6032380
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  6032349 aaattctgtaattcatttattgaatgttagaa 6032380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 33648044 - 33648013
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  33648044 aaattctgtaattcatttattgaatgttagaa 33648013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 33668426 - 33668457
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  33668426 aaattctgtaattcatttattgaatgttagaa 33668457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 131
Target Start/End: Complemental strand, 33668705 - 33668674
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttaga 131  Q
    ||||||||||||||||||||||||||||||||    
T  33668705 aaaattctgtaattcatttattgaatgttaga 33668674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 131
Target Start/End: Complemental strand, 12809586 - 12809556
Alignment:
Q  101 aaattctgtaattcatttattgaatgttaga 131  Q
    |||||||||||||||||||||||||||||||    
T  12809586 aaattctgtaattcatttattgaatgttaga 12809556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 30611230 - 30611200
Alignment:
Q  102 aattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||    
T  30611230 aattctgtaattcatttattgaatgttagaa 30611200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 130
Target Start/End: Original strand, 13944485 - 13944514
Alignment:
Q  101 aaattctgtaattcatttattgaatgttag 130  Q
    ||||||||||||||||||||||||||||||    
T  13944485 aaattctgtaattcatttattgaatgttag 13944514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 12809263 - 12809295
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||| ||||||||||||||||||||||||    
T  12809263 aaaattctttaattcatttattgaatgttagaa 12809295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 30610924 - 30610956
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||| ||||||||||||||||||    
T  30610924 aaaattctgtaatttatttattgaatgttagaa 30610956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 3739204 - 3739236
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  3739204 aaaattctgtaattcatttattgaatgttagaa 3739236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 3739547 - 3739515
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  3739547 aaaattctgtaattcatttattgaatgttagaa 3739515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 8813564 - 8813532
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  8813564 aaaattctgtaattcatttattgaatgttagaa 8813532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 4929083 - 4929114
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  4929083 aaattctgtaattcatttattgaatgttagaa 4929114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 131
Target Start/End: Complemental strand, 4929390 - 4929359
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttaga 131  Q
    ||||||||||||||||||||||||||||||||    
T  4929390 aaaattctgtaattcatttattgaatgttaga 4929359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 8813258 - 8813289
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  8813258 aaattctgtaattcatttattgaatgttagaa 8813289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 131
Target Start/End: Complemental strand, 28075840 - 28075810
Alignment:
Q  101 aaattctgtaattcatttattgaatgttaga 131  Q
    |||||||||||||||||||||||||||||||    
T  28075840 aaattctgtaattcatttattgaatgttaga 28075810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 42408448 - 42408416
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||| ||||||||||||||||||||||||||    
T  42408448 aaaattttgtaattcatttattgaatgttagaa 42408416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 12640469 - 12640437
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  12640469 aaaattctgtaattcatttattgaatgttagaa 12640437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 20422614 - 20422582
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  20422614 aaaattctgtaattcatttattgaatgttagaa 20422582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 25369985 - 25370017
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  25369985 aaaattctgtaattcatttattgaatgttagaa 25370017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 28223757 - 28223789
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  28223757 aaaattctgtaattcatttattgaatgttagaa 28223789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 31877324 - 31877292
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  31877324 aaaattctgtaattcatttattgaatgttagaa 31877292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 35427764 - 35427732
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  35427764 aaaattctgtaattcatttattgaatgttagaa 35427732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 40847868 - 40847900
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  40847868 aaaattctgtaattcatttattgaatgttagaa 40847900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 40848012 - 40847980
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  40848012 aaaattctgtaattcatttattgaatgttagaa 40847980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 48090980 - 48090948
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  48090980 aaaattctgtaattcatttattgaatgttagaa 48090948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 6862854 - 6862885
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  6862854 aaattctgtaattcatttattgaatgttagaa 6862885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 20422331 - 20422362
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  20422331 aaattctgtaattcatttattgaatgttagaa 20422362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 32291228 - 32291259
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  32291228 aaattctgtaattcatttattgaatgttagaa 32291259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 32902346 - 32902315
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  32902346 aaattctgtaattcatttattgaatgttagaa 32902315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 35427447 - 35427478
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  35427447 aaattctgtaattcatttattgaatgttagaa 35427478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 36111101 - 36111070
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  36111101 aaattctgtaattcatttattgaatgttagaa 36111070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 37567067 - 37567098
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  37567067 aaattctgtaattcatttattgaatgttagaa 37567098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 40344707 - 40344738
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  40344707 aaattctgtaattcatttattgaatgttagaa 40344738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 48781687 - 48781718
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  48781687 aaattctgtaattcatttattgaatgttagaa 48781718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 48781955 - 48781924
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  48781955 aaattctgtaattcatttattgaatgttagaa 48781924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 131
Target Start/End: Complemental strand, 3709295 - 3709265
Alignment:
Q  101 aaattctgtaattcatttattgaatgttaga 131  Q
    |||||||||||||||||||||||||||||||    
T  3709295 aaattctgtaattcatttattgaatgttaga 3709265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 131
Target Start/End: Original strand, 20075739 - 20075769
Alignment:
Q  101 aaattctgtaattcatttattgaatgttaga 131  Q
    |||||||||||||||||||||||||||||||    
T  20075739 aaattctgtaattcatttattgaatgttaga 20075769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 131
Target Start/End: Original strand, 32902055 - 32902085
Alignment:
Q  101 aaattctgtaattcatttattgaatgttaga 131  Q
    |||||||||||||||||||||||||||||||    
T  32902055 aaattctgtaattcatttattgaatgttaga 32902085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 55816323 - 55816293
Alignment:
Q  102 aattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||    
T  55816323 aattctgtaattcatttattgaatgttagaa 55816293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 389278 - 389246
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||| ||||||||||    
T  389278 aaaattctgtaattcatttattaaatgttagaa 389246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 3708976 - 3709008
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||| |||||||||||||||||||||||    
T  3708976 aaaattctgaaattcatttattgaatgttagaa 3709008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 26423961 - 26423993
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||| ||||||||||||||||||||||||    
T  26423961 aaaattctttaattcatttattgaatgttagaa 26423993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 36944813 - 36944845
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||| |||||||||||||||||||||||    
T  36944813 aaaattctgcaattcatttattgaatgttagaa 36944845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 40345031 - 40344999
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||| ||||    
T  40345031 aaaattctgtaattcatttattgaatgtcagaa 40344999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 23584756 - 23584724
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  23584756 aaaattctgtaattcatttattgaatgttagaa 23584724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 23599579 - 23599547
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  23599579 aaaattctgtaattcatttattgaatgttagaa 23599547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 29342545 - 29342577
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  29342545 aaaattctgtaattcatttattgaatgttagaa 29342577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 37375345 - 37375313
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  37375345 aaaattctgtaattcatttattgaatgttagaa 37375313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 44868492 - 44868460
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  44868492 aaaattctgtaattcatttattgaatgttagaa 44868460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 48218794 - 48218826
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  48218794 aaaattctgtaattcatttattgaatgttagaa 48218826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 8427615 - 8427584
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  8427615 aaattctgtaattcatttattgaatgttagaa 8427584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 25025379 - 25025410
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  25025379 aaattctgtaattcatttattgaatgttagaa 25025410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 29342865 - 29342834
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  29342865 aaattctgtaattcatttattgaatgttagaa 29342834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 32672368 - 32672399
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  32672368 aaattctgtaattcatttattgaatgttagaa 32672399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 37374169 - 37374200
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  37374169 aaattctgtaattcatttattgaatgttagaa 37374200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 43104096 - 43104127
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  43104096 aaattctgtaattcatttattgaatgttagaa 43104127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 131
Target Start/End: Complemental strand, 43658778 - 43658747
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttaga 131  Q
    ||||||||||||||||||||||||||||||||    
T  43658778 aaaattctgtaattcatttattgaatgttaga 43658747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 48219118 - 48219087
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  48219118 aaattctgtaattcatttattgaatgttagaa 48219087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 49752478 - 49752509
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  49752478 aaattctgtaattcatttattgaatgttagaa 49752509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 131
Target Start/End: Original strand, 50687289 - 50687320
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttaga 131  Q
    ||||||||||||||||||||||||||||||||    
T  50687289 aaaattctgtaattcatttattgaatgttaga 50687320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 131
Target Start/End: Original strand, 3945099 - 3945129
Alignment:
Q  101 aaattctgtaattcatttattgaatgttaga 131  Q
    |||||||||||||||||||||||||||||||    
T  3945099 aaattctgtaattcatttattgaatgttaga 3945129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 131
Target Start/End: Complemental strand, 19555803 - 19555773
Alignment:
Q  101 aaattctgtaattcatttattgaatgttaga 131  Q
    |||||||||||||||||||||||||||||||    
T  19555803 aaattctgtaattcatttattgaatgttaga 19555773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 131
Target Start/End: Complemental strand, 32672656 - 32672626
Alignment:
Q  101 aaattctgtaattcatttattgaatgttaga 131  Q
    |||||||||||||||||||||||||||||||    
T  32672656 aaattctgtaattcatttattgaatgttaga 32672626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 131
Target Start/End: Original strand, 38575233 - 38575263
Alignment:
Q  101 aaattctgtaattcatttattgaatgttaga 131  Q
    |||||||||||||||||||||||||||||||    
T  38575233 aaattctgtaattcatttattgaatgttaga 38575263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 43658429 - 43658459
Alignment:
Q  102 aattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||    
T  43658429 aattctgtaattcatttattgaatgttagaa 43658459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 100 - 129
Target Start/End: Original strand, 40887487 - 40887516
Alignment:
Q  100 aaaattctgtaattcatttattgaatgtta 129  Q
    ||||||||||||||||||||||||||||||    
T  40887487 aaaattctgtaattcatttattgaatgtta 40887516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 3945416 - 3945384
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||| ||||||||||||||||||||||||    
T  3945416 aaaattctctaattcatttattgaatgttagaa 3945384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 129
Target Start/End: Complemental strand, 37374499 - 37374471
Alignment:
Q  101 aaattctgtaattcatttattgaatgtta 129  Q
    |||||||||||||||||||||||||||||    
T  37374499 aaattctgtaattcatttattgaatgtta 37374471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 38575526 - 38575494
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||| ||||||||||||||||||||||||||    
T  38575526 aaaattttgtaattcatttattgaatgttagaa 38575494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 41875498 - 41875466
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||| ||||||||||||||||||||||    
T  41875498 aaaattctgtcattcatttattgaatgttagaa 41875466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 42356448 - 42356480
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||| ||||||||||||||||||||||||    
T  42356448 aaaattctataattcatttattgaatgttagaa 42356480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 47737256 - 47737288
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||| ||||||||||||||||||||||||||    
T  47737256 aaaattttgtaattcatttattgaatgttagaa 47737288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 50687590 - 50687558
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||| |||||||||||||||||||||    
T  50687590 aaaattctgtatttcatttattgaatgttagaa 50687558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 7583336 - 7583368
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  7583336 aaaattctgtaattcatttattgaatgttagaa 7583368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 7716876 - 7716908
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  7716876 aaaattctgtaattcatttattgaatgttagaa 7716908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 8112879 - 8112911
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  8112879 aaaattctgtaattcatttattgaatgttagaa 8112911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 28223991 - 28224023
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  28223991 aaaattctgtaattcatttattgaatgttagaa 28224023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 3595788 - 3595757
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  3595788 aaattctgtaattcatttattgaatgttagaa 3595757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 17918559 - 17918528
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  17918559 aaattctgtaattcatttattgaatgttagaa 17918528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 28224260 - 28224229
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  28224260 aaattctgtaattcatttattgaatgttagaa 28224229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 30162146 - 30162177
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  30162146 aaattctgtaattcatttattgaatgttagaa 30162177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 39477199 - 39477168
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  39477199 aaattctgtaattcatttattgaatgttagaa 39477168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 16571312 - 16571342
Alignment:
Q  102 aattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||    
T  16571312 aattctgtaattcatttattgaatgttagaa 16571342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 3595457 - 3595489
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||| ||||||||||||||||||    
T  3595457 aaaattctgtaatttatttattgaatgttagaa 3595489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 4386832 - 4386800
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||| |||||||||||||||||||||    
T  4386832 aaaattctgtatttcatttattgaatgttagaa 4386800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 11256319 - 11256351
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||| ||||||||||||||||||||||||||    
T  11256319 aaaattatgtaattcatttattgaatgttagaa 11256351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 43368393 - 43368425
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  43368393 aaaattctgtaattcatttattgaatgttagaa 43368425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 49534278 - 49534246
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  49534278 aaaattctgtaattcatttattgaatgttagaa 49534246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 51248366 - 51248334
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||||    
T  51248366 aaaattctgtaattcatttattgaatgttagaa 51248334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 8560359 - 8560390
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  8560359 aaattctgtaattcatttattgaatgttagaa 8560390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 41563672 - 41563641
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  41563672 aaattctgtaattcatttattgaatgttagaa 41563641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 43368716 - 43368685
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  43368716 aaattctgtaattcatttattgaatgttagaa 43368685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 48843857 - 48843826
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  48843857 aaattctgtaattcatttattgaatgttagaa 48843826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 52859669 - 52859638
Alignment:
Q  101 aaattctgtaattcatttattgaatgttagaa 132  Q
    ||||||||||||||||||||||||||||||||    
T  52859669 aaattctgtaattcatttattgaatgttagaa 52859638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 130
Target Start/End: Complemental strand, 6288085 - 6288055
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttag 130  Q
    |||||||||||||||||||||||||||||||    
T  6288085 aaaattctgtaattcatttattgaatgttag 6288055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 131
Target Start/End: Complemental strand, 7219530 - 7219500
Alignment:
Q  101 aaattctgtaattcatttattgaatgttaga 131  Q
    |||||||||||||||||||||||||||||||    
T  7219530 aaattctgtaattcatttattgaatgttaga 7219500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 27797613 - 27797583
Alignment:
Q  102 aattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||    
T  27797613 aattctgtaattcatttattgaatgttagaa 27797583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 42839147 - 42839177
Alignment:
Q  102 aattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||    
T  42839147 aattctgtaattcatttattgaatgttagaa 42839177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 42839910 - 42839940
Alignment:
Q  102 aattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||    
T  42839910 aattctgtaattcatttattgaatgttagaa 42839940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Original strand, 52859362 - 52859392
Alignment:
Q  102 aattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||    
T  52859362 aattctgtaattcatttattgaatgttagaa 52859392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 1403243 - 1403275
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||| ||||||    
T  1403243 aaaattctgtaattcatttattgaatattagaa 1403275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Original strand, 7219212 - 7219244
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||| ||||||||||||||||||||||||||    
T  7219212 aaaattatgtaattcatttattgaatgttagaa 7219244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 42839443 - 42839411
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||| ||||||||||||||||||||||||    
T  42839443 aaaattctataattcatttattgaatgttagaa 42839411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 42840197 - 42840165
Alignment:
Q  100 aaaattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||| ||||||||    
T  42840197 aaaattctgtaattcatttattgagtgttagaa 42840165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 132
Target Start/End: Original strand, 48843778 - 48843806
Alignment:
Q  104 ttctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||    
T  48843778 ttctgtaattcatttattgaatgttagaa 48843806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 11661 - 11631
Alignment:
Q  102 aattctgtaattcatttattgaatgttagaa 132  Q
    |||||||||||||||||||||||||||||||    
T  11661 aattctgtaattcatttattgaatgttagaa 11631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University