View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1977_low_7 (Length: 286)
Name: NF1977_low_7
Description: NF1977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1977_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 16 - 264
Target Start/End: Complemental strand, 37604712 - 37604464
Alignment:
| Q |
16 |
atgaagaaacaacaaactattgtttatcacgaaacgttacatgaaaaatcatacaatctatcatctatctattaaaagctaatcttaaaggttatattat |
115 |
Q |
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| T |
37604712 |
atgaagaaacaacaaactattgtttatcacgaaacgttacatgaaaaatcatacaatctatcatctatctattaaaagctaatcttaaaggttatattat |
37604613 |
T |
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| Q |
116 |
tagaaataggcaatacataataagataagatatttttcttacaaccacttgtgtatatacccaaagctctgagtagaaacaaaagtaaagctgcataaaa |
215 |
Q |
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| T |
37604612 |
tagaaataggcaatacataataagataagatatttttcttacaaccacttgtgtatatacccaaagctctgagtagaaacaaaagtaaagctgcataaaa |
37604513 |
T |
|
| Q |
216 |
gggaaaaacattgctaagagacaactttgtctcatataaaggacaacgt |
264 |
Q |
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| T |
37604512 |
gggaaaaacattgctaagagacaactttgtctcatataaaggacaacgt |
37604464 |
T |
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