View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19782_high_57 (Length: 259)
Name: NF19782_high_57
Description: NF19782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19782_high_57 |
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Alignment Details
Target: chr3 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 12 - 258
Target Start/End: Original strand, 44997809 - 44998055
Alignment:
| Q |
12 |
atgaaggatgatgagcttgatgacatgatgaacagcctttcccagatttttcgttgggatcttcttgttggagagcgttacggcatcaaagccgccatta |
111 |
Q |
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| T |
44997809 |
atgaaggatgatgagcttgatgacatgatgaacagcctttcccagatttttcgttgggatcttcttgttggagagcgttacggcatcaaagctgccatta |
44997908 |
T |
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| Q |
112 |
gagctgaacggagacgccttgatgaagaggaaattaaacgccggggtcttctttccggcgataccaccaacgctctcgatgctctctctcaagaaggtgc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44997909 |
gagctgaacggagacgccttgatgaagaggaaattaaacgccggggtcttctttccggcgataccaccaacgctctcgatgctctctctcaagaaggtgc |
44998008 |
T |
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| Q |
212 |
acagtcatttataataattgactcaaattattctactgttatattaa |
258 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44998009 |
acagtcatttataataattgactcaaattattctactgttatattaa |
44998055 |
T |
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