View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19782_high_70 (Length: 246)
Name: NF19782_high_70
Description: NF19782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19782_high_70 |
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Alignment Details
Target: chr6 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 5597230 - 5596998
Alignment:
| Q |
1 |
tgatgtatattgaccaagtgattgcatgcaattggtgactacaacgaattcaaattttgnnnnnnnnnnnaaaagggtttaatggtgtgttttaattggt |
100 |
Q |
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| T |
5597230 |
tgatgtatattgaccaagtgattgcgtgcaattggtgactacaacgaattcaaattttatgtttttttttaaaagggtttaatggtgtgttttaattggt |
5597131 |
T |
|
| Q |
101 |
atgttcatatatttcacaaaataaaatttacatagaatgttggatgaattaatcatctccatctataataggaacaacaacaaataaataaaaaagggaa |
200 |
Q |
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| T |
5597130 |
atgttcatatatttcacaaaataaaatttacgtagaatgttggatgaatgaatcatctccatctataataggaacaacaacaaataaataaaaaagggaa |
5597031 |
T |
|
| Q |
201 |
aaggttaaagaagttagaaatgatggttatttg |
233 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
5597030 |
aaggttaaagaagttagaaatgatggttatttg |
5596998 |
T |
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