View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19782_low_39 (Length: 329)
Name: NF19782_low_39
Description: NF19782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19782_low_39 |
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Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 38 - 311
Target Start/End: Original strand, 4325248 - 4325521
Alignment:
| Q |
38 |
tttatggcatgatcaatgaaatttgataatgttttagaaagcaaacaatcctaatatttattcgaattcttttctcctagtggtttcatattgtcagcac |
137 |
Q |
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| T |
4325248 |
tttatggcatgatcaatgaaatttgataatgttttagaaagcaaacaatcctaatatttattcgatttcttttctcctagtggtttcattttgtcagcac |
4325347 |
T |
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| Q |
138 |
taaccaacaaaattgcttagaaatgagaaaaccagcaagaagaaaagggaaacacgcatgcacatacattatgccctttagatctcttgacgtacttaag |
237 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
4325348 |
taaccaacaaaattgcttagaaatgagaaaaccagcaagaagaaaagggaaacacgcatgcacatacattatgccctttagatctcttgacgtacctaag |
4325447 |
T |
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| Q |
238 |
ttgaataaagaaaattttgaaaagaattacaatccaatttatatatttatagggaagaagaaaacttgacaaca |
311 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4325448 |
ttgaataaagaaaattttgaaaagagttacaatccaatttatatatttatagggaagaagaaaacttgacaaca |
4325521 |
T |
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