View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19782_low_44 (Length: 308)
Name: NF19782_low_44
Description: NF19782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19782_low_44 |
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Alignment Details
Target: chr6 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 21 - 295
Target Start/End: Complemental strand, 31605626 - 31605354
Alignment:
| Q |
21 |
ttatggttcgctaacattaacaactagtgatttaatgaaattttttacattgatatctacatcgatcaaaaactcatttaacattcgattcaatgaccaa |
120 |
Q |
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| T |
31605626 |
ttatggttcgctaacatttacaac--gtgatttaaagacgttttttacattgatatctatatcgatcaaaaactcatttaacattcaatttagtgatgaa |
31605529 |
T |
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| Q |
121 |
ttcaacaatctattcgaaaattcaatcactaaatcagacaccagaggcactagaatattttgattactattttggtcaataaatatcattattttaaaaa |
220 |
Q |
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|| ||||||| ||| |||||||||||||||||||| ||| | |||| ||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| |
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| T |
31605528 |
tttaacaatccatttgaaaattcaatcactaaatccgacgctagagacactagaatattttgattattatgttggttaataaatatcattattttaaaaa |
31605429 |
T |
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| Q |
221 |
atataagacgattgtctatctcaagagtctctttttgcctcgttaataagtaaataatttttataacattttcat |
295 |
Q |
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||||||| | ||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
31605428 |
atataaggcaattatctatttcaagagtctcttttcgcctcgttaataagtaaataatttttataacattttcat |
31605354 |
T |
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