View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19782_low_51 (Length: 292)
Name: NF19782_low_51
Description: NF19782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19782_low_51 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 962449 - 962717
Alignment:
| Q |
18 |
gaaaataaaatggttgttatccaaataatagtcaaaatataaagatttccaaaattcaaacaagaatctttatgagatattgagcacattaattgccact |
117 |
Q |
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| T |
962449 |
gaaaataaaatggttgttatccaaataatagtcaaaatataaagatttccaaaattcaaacaagaatctttatgagatattgagcac----attgccact |
962544 |
T |
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| Q |
118 |
agttttacagaagcttctctttctccaacctctataaaaaggaccaaaaccattaccccattgtgccatcacaaacaacactttc-------------tt |
204 |
Q |
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| T |
962545 |
agttttacataagcttctctttctccaacctctataaaaaggaccaaaaccattacaccattatgccatcacaaacaacactttcatttcaattttcatt |
962644 |
T |
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| Q |
205 |
ttgatcattttcactccttttccacaagtttcatcatgactacaatttcattcaaccaccaaccaaacaacat |
277 |
Q |
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| T |
962645 |
ttgatcattttcactccttttccacaagtttcatcatgactacaatttcattcaaccaccaaccaaacaacat |
962717 |
T |
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