View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19782_low_53 (Length: 282)

Name: NF19782_low_53
Description: NF19782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19782_low_53
NF19782_low_53
[»] chr1 (17 HSPs)
chr1 (220-282)||(52073364-52073427)
chr1 (220-277)||(35604175-35604232)
chr1 (220-282)||(33579365-33579428)
chr1 (220-281)||(17416624-17416686)
chr1 (225-282)||(7412737-7412794)
chr1 (220-282)||(1278581-1278644)
chr1 (232-279)||(9173668-9173715)
chr1 (247-282)||(28217477-28217512)
chr1 (220-282)||(30543269-30543332)
chr1 (220-282)||(50097726-50097789)
chr1 (221-282)||(40136131-40136193)
chr1 (220-282)||(2493044-2493105)
chr1 (234-282)||(24436853-24436901)
chr1 (243-279)||(34141643-34141679)
chr1 (234-282)||(37955290-37955338)
chr1 (234-282)||(43530219-43530267)
chr1 (233-277)||(51303095-51303139)
[»] scaffold1763 (1 HSPs)
scaffold1763 (220-282)||(510-573)
[»] chr2 (18 HSPs)
chr2 (227-282)||(3022807-3022862)
chr2 (220-282)||(13767530-13767593)
chr2 (233-282)||(31809517-31809566)
chr2 (220-279)||(30265265-30265325)
chr2 (234-282)||(36030905-36030953)
chr2 (234-282)||(44656671-44656719)
chr2 (219-279)||(32950991-32951053)
chr2 (243-282)||(39913385-39913424)
chr2 (248-282)||(9087633-9087667)
chr2 (248-282)||(12941732-12941766)
chr2 (225-282)||(34757718-34757776)
chr2 (236-282)||(39670102-39670148)
chr2 (220-279)||(41503269-41503330)
chr2 (248-282)||(42946659-42946693)
chr2 (249-282)||(17514933-17514966)
chr2 (234-282)||(14385192-14385240)
chr2 (220-280)||(16625711-16625771)
chr2 (230-282)||(38216434-38216486)
[»] chr6 (9 HSPs)
chr6 (220-282)||(8439302-8439364)
chr6 (220-282)||(26683429-26683491)
chr6 (230-282)||(33939040-33939092)
chr6 (234-282)||(4465038-4465086)
chr6 (234-282)||(6855763-6855811)
chr6 (220-282)||(13120328-13120391)
chr6 (220-282)||(32222114-32222177)
chr6 (220-282)||(33677135-33677195)
chr6 (234-282)||(15986455-15986503)
[»] chr4 (17 HSPs)
chr4 (213-282)||(15498693-15498763)
chr4 (220-282)||(31428913-31428975)
chr4 (220-282)||(42759558-42759620)
chr4 (234-282)||(53013699-53013747)
chr4 (220-282)||(15451243-15451306)
chr4 (220-282)||(28880103-28880166)
chr4 (234-282)||(49936614-49936662)
chr4 (234-277)||(8828131-8828174)
chr4 (220-282)||(6836512-6836574)
chr4 (252-282)||(52430514-52430544)
chr4 (233-282)||(4441943-4441992)
chr4 (220-282)||(27485168-27485232)
chr4 (220-282)||(40422978-40423042)
chr4 (223-282)||(24662656-24662716)
chr4 (234-282)||(41495561-41495609)
chr4 (234-282)||(46669866-46669914)
chr4 (234-282)||(51431056-51431104)
[»] chr8 (14 HSPs)
chr8 (220-282)||(3394073-3394136)
chr8 (220-277)||(37388396-37388454)
chr8 (234-282)||(40984995-40985043)
chr8 (220-282)||(13537454-13537517)
chr8 (220-282)||(13627002-13627065)
chr8 (233-282)||(38404453-38404502)
chr8 (220-282)||(13258598-13258661)
chr8 (220-282)||(35616672-35616735)
chr8 (220-282)||(35353939-35354001)
chr8 (220-277)||(13949657-13949714)
chr8 (233-282)||(43007810-43007859)
chr8 (234-282)||(10605078-10605126)
chr8 (234-282)||(27085460-27085508)
chr8 (234-282)||(39405172-39405220)
[»] chr5 (15 HSPs)
chr5 (220-282)||(9684697-9684760)
chr5 (220-282)||(9096423-9096485)
chr5 (220-282)||(19389734-19389797)
chr5 (233-282)||(28154802-28154851)
chr5 (234-282)||(28523730-28523778)
chr5 (234-282)||(32824760-32824808)
chr5 (220-282)||(344146-344209)
chr5 (220-282)||(3924762-3924825)
chr5 (220-282)||(39011943-39012005)
chr5 (237-282)||(6491296-6491341)
chr5 (234-282)||(2021092-2021140)
chr5 (242-282)||(7147507-7147547)
chr5 (234-282)||(15399927-15399975)
chr5 (234-282)||(35042316-35042364)
chr5 (226-282)||(37909103-37909159)
[»] chr3 (16 HSPs)
chr3 (220-282)||(31651351-31651414)
chr3 (220-282)||(32858942-32859004)
chr3 (220-282)||(1132841-1132904)
chr3 (220-282)||(4247229-4247292)
chr3 (220-282)||(13638538-13638601)
chr3 (220-282)||(54089360-54089424)
chr3 (234-282)||(30697483-30697531)
chr3 (234-282)||(42134611-42134659)
chr3 (234-282)||(49304320-49304368)
chr3 (220-282)||(45898607-45898670)
chr3 (220-282)||(27681915-27681977)
chr3 (222-282)||(32720990-32721051)
chr3 (233-282)||(33145261-33145310)
chr3 (234-282)||(48444617-48444665)
chr3 (234-282)||(54372497-54372545)
chr3 (234-282)||(54748423-54748471)
[»] chr7 (15 HSPs)
chr7 (234-282)||(36907395-36907443)
chr7 (223-282)||(45510454-45510514)
chr7 (220-282)||(4787908-4787972)
chr7 (234-282)||(374457-374505)
chr7 (234-282)||(24923315-24923363)
chr7 (220-282)||(12863559-12863622)
chr7 (220-282)||(10591811-10591873)
chr7 (248-282)||(38987505-38987539)
chr7 (233-282)||(38991393-38991442)
chr7 (234-282)||(23329318-23329366)
chr7 (219-282)||(33187752-33187816)
chr7 (220-282)||(37334843-37334902)
chr7 (234-282)||(38138043-38138091)
chr7 (234-282)||(41002172-41002220)
chr7 (234-282)||(42220152-42220200)
[»] scaffold0245 (1 HSPs)
scaffold0245 (220-282)||(4258-4321)
[»] scaffold0229 (1 HSPs)
scaffold0229 (220-282)||(4589-4652)


Alignment Details
Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 52073364 - 52073427
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||    
T  52073364 ttttgaaagagtaattttttagagaatgataaattaacgtttatgattaatatatttttaattt 52073427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 35604175 - 35604232
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatattttt 277  Q
    |||||| |||||| |||||||| |||  ||||||||||||||||||||||||||||||    
T  35604175 ttttgatagagtattttttagagaataataaattaacgtttatgattaatatattttt 35604232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 33579428 - 33579365
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||||||||| ||| |||| |||||||| | |||||| |||||||||||||||||    
T  33579428 ttttgaaagagtaattttttagagaatgataaattaatgcttatgactaatatatttttaattt 33579365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 281
Target Start/End: Original strand, 17416624 - 17416686
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaatt 281  Q
    ||||| ||||||||||||| ||| | || |||||||| |||||||||||||||||||||||||    
T  17416624 ttttgtaagagtaattttttagagattgataaattaatgtttatgattaatatatttttaatt 17416686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 7412794 - 7412737
Alignment:
Q  225 aaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| ||||||||||||| ||||||||  |||||||||| || |||||||||||    
T  7412794 aaagagtattttttagataatgataaattaatttttatgattactaaatttttaattt 7412737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 1278644 - 1278581
Alignment:
Q  220 ttttgaaagagtaatttttag-ataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||| |||||||||||||| | | |||| |||||||| | ||||||||||||||||||||||||    
T  1278644 ttttaaaagagtaattttttggagaatgataaattaatgcttatgattaatatatttttaattt 1278581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 279
Target Start/End: Original strand, 9173668 - 9173715
Alignment:
Q  232 aatttttagataatggtaaattaacgtttatgattaatatatttttaa 279  Q
    ||||||||||||||| |||| ||| | |||||||||||||||||||||    
T  9173668 aatttttagataatgataaactaatgcttatgattaatatatttttaa 9173715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 247 - 282
Target Start/End: Original strand, 28217477 - 28217512
Alignment:
Q  247 gtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||| ||||||||||||||||||||||||||    
T  28217477 gtaaattaatgtttatgattaatatatttttaattt 28217512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 30543269 - 30543332
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||| |||||||| ||| |||| ||||||||   ||||||||||||||||||||||||    
T  30543269 ttttgaaagaataattttttagagaatgataaattaatacttatgattaatatatttttaattt 30543332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 50097789 - 50097726
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||| ||||| ||| | || |||||||  ||||||||||||||||||||||||||    
T  50097789 ttttgaaagagtatttttttagagagtgataaattattgtttatgattaatatatttttaattt 50097726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 40136131 - 40136193
Alignment:
Q  221 tttgaaagagtaatttt-tagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||| |||||| |||| |||| |||| |||||||| |||||||||||||| |||||||||||    
T  40136131 tttgagagagtatttttgtagagaatgataaattaatgtttatgattaatagatttttaattt 40136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 2493044 - 2493105
Alignment:
Q  220 ttttgaaagagtaat-ttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||| |||| ||||||| |||| ||||||||  |||||||||||||||||| ||||||    
T  2493044 ttttgaaagattaatattttagagaatgataaattaa--tttatgattaatatatttgtaattt 2493105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 24436853 - 24436901
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| | || |||||||| |||| |||||||||||||||||||||    
T  24436853 tttttagagagtgataaattaatgtttttgattaatatatttttaattt 24436901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 279
Target Start/End: Complemental strand, 34141679 - 34141643
Alignment:
Q  243 aatggtaaattaacgtttatgattaatatatttttaa 279  Q
    |||| |||||||| |||||||||||||||||||||||    
T  34141679 aatgataaattaatgtttatgattaatatatttttaa 34141643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 37955338 - 37955290
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||| ||| |||| | ||||||||| ||||||||||||||    
T  37955338 tttttagataatgataagttaatgcttatgattactatatttttaattt 37955290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 43530219 - 43530267
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| | || |||||||| | ||||||||||||||||||||||||    
T  43530219 tttttagagagtgataaattaatgcttatgattaatatatttttaattt 43530267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 51303095 - 51303139
Alignment:
Q  233 atttttagataatggtaaattaacgtttatgattaatatattttt 277  Q
    ||||||||| |||| |||||||| | |||||||||||||||||||    
T  51303095 atttttagagaatgataaattaatgcttatgattaatatattttt 51303139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1763 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 510 - 573
Alignment:
Q  220 ttttgaaagagtaa-tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||| |||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  510 ttttgaaagagtaaatttttagagaatgttaaattaatgtttatgattaatatatttttaattt 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 3022862 - 3022807
Alignment:
Q  227 agagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  3022862 agagtaatttttagagaatgataaattaatgtttatgattaatatatttttaattt 3022807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 13767593 - 13767530
Alignment:
Q  220 ttttgaaagagtaatttt--tagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||||||||  |||| |||| ||||| || ||||||||||||||||||||||||||    
T  13767593 ttttgaaagagtaattttattagagaatgataaat-aatgtttatgattaatatatttttaattt 13767530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 31809566 - 31809517
Alignment:
Q  233 atttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||| |||||||| ||||| ||||||||||||||| ||||    
T  31809566 atttttagataatgataaattaatgtttaagattaatatattttttattt 31809517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 279
Target Start/End: Original strand, 30265265 - 30265325
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaa 279  Q
    ||||||||||||||||||| ||| |||  |||||||| | |||||||||||||||||||||    
T  30265265 ttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatatttttaa 30265325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 36030953 - 36030905
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||||| | ||||||||||||||||||||||||    
T  36030953 tttttagagaatgataaattaatgcttatgattaatatatttttaattt 36030905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 44656671 - 44656719
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||| || ||||||||  |||||||||||||||||||||||||    
T  44656671 tttttagatagtgataaattaatttttatgattaatatatttttaattt 44656719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 32951053 - 32950991
Alignment:
Q  219 cttttgaaagagtaa--tttttagataatggtaaattaacgtttatgattaatatatttttaa 279  Q
    ||||| |||||||||  |||||||| |||| ||||||||  ||||||||||||||||||||||    
T  32951053 cttttaaaagagtaacttttttagagaatgataaattaatatttatgattaatatatttttaa 32950991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 39913424 - 39913385
Alignment:
Q  243 aatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  39913424 aatgataaattaatgtttatgattaatatatttttaattt 39913385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 282
Target Start/End: Original strand, 9087633 - 9087667
Alignment:
Q  248 taaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| ||||||||||||||||||||||||||    
T  9087633 taaattaatgtttatgattaatatatttttaattt 9087667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 282
Target Start/End: Original strand, 12941732 - 12941766
Alignment:
Q  248 taaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||||| ||||||||||||||||||    
T  12941732 taaattaacgtttatggttaatatatttttaattt 12941766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 34757776 - 34757718
Alignment:
Q  225 aaagagtaattt-ttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||| ||||| |||| |||||||| || |||||||| ||||||||||||||    
T  34757776 aaagagtaatttcttagagaatgataaattaatgtatatgattattatatttttaattt 34757718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 39670102 - 39670148
Alignment:
Q  236 tttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||| |||| |||||||| ||||||||| ||||||||||||||||    
T  39670102 tttagagaatgataaattaatgtttatgatcaatatatttttaattt 39670148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 279
Target Start/End: Complemental strand, 41503330 - 41503269
Alignment:
Q  220 ttttgaaagagtaattt--ttagataatggtaaattaacgtttatgattaatatatttttaa 279  Q
    ||||||||||||| |||  ||||| |||| |||||||| | |||||||||||||||||||||    
T  41503330 ttttgaaagagtagtttgtttagagaatgataaattaatgattatgattaatatatttttaa 41503269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 282
Target Start/End: Original strand, 42946659 - 42946693
Alignment:
Q  248 taaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| ||||||||||||||||||||||||||    
T  42946659 taaattaatgtttatgattaatatatttttaattt 42946693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 282
Target Start/End: Original strand, 17514933 - 17514966
Alignment:
Q  249 aaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||| ||||||||||||||||||||||||||    
T  17514933 aaattaatgtttatgattaatatatttttaattt 17514966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 14385240 - 14385192
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||||| |||||| |||| ||||||||||||||    
T  14385240 tttttagagaatgataaattaatgtttattattagtatatttttaattt 14385192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 280
Target Start/End: Original strand, 16625711 - 16625771
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaat 280  Q
    ||||||||||||| |||||||| |||| ||||  || | |||||||| |||||||||||||    
T  16625711 ttttgaaagagtattttttagagaatgataaaccaatgcttatgattcatatatttttaat 16625771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 38216434 - 38216486
Alignment:
Q  230 gtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||| |||| |||| || || || ||||||||||||||||||||||||||    
T  38216434 gtaatttgtagagaatgatagatgaatgtttatgattaatatatttttaattt 38216486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 8439302 - 8439364
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  8439302 ttttgaaaaagtattttttagagaatgataaattaatgtttatgattaatatatttttaattt 8439364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 26683491 - 26683429
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||||||||| || |||| |||||||| | || |||||||||||||||||||||    
T  26683491 ttttgaaagagtaattttttgagaatgataaattaatgcttgtgattaatatatttttaattt 26683429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 230 - 282
Target Start/End: Original strand, 33939040 - 33939092
Alignment:
Q  230 gtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| ||| |||| |||||||| ||||||||||||||||||||||||||    
T  33939040 gtaattttaagagaatgataaattaatgtttatgattaatatatttttaattt 33939092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 4465086 - 4465038
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||| | |||| |||||||| ||||||||||||||||||||||||||    
T  4465086 tttttaaagaatgataaattaatgtttatgattaatatatttttaattt 4465038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 6855811 - 6855763
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||| |||||| |||||||| || |||||||||||||||||||||||    
T  6855811 tttttaaataatgataaattaatgtatatgattaatatatttttaattt 6855763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 13120328 - 13120391
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||||||||| ||| |||| |||||||| |  ||| |||||||||||||||||||    
T  13120328 ttttgaaagagtaattttttagagaatgataaattaatgagtataattaatatatttttaattt 13120391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 32222177 - 32222114
Alignment:
Q  220 ttttgaaagagtaatt-tttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||| || |||||| |||| |||||||| ||||||||||| ||||||||| ||||    
T  32222177 ttttgaaagagtagttgtttagagaatgataaattaatgtttatgattactatattttttattt 32222114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 33677195 - 33677135
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||  ||||||| | || |||||||| | ||||||||||||||||||||||||    
T  33677195 ttttgaaagagta--ttttagagagtgataaattaatgcttatgattaatatatttttaattt 33677135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 15986503 - 15986455
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||||| | | ||||||||||||||||||||||    
T  15986503 tttttagagaatgataaattaatgataatgattaatatatttttaattt 15986455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 15498693 - 15498763
Alignment:
Q  213 ctttcacttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||| |||||||||||||||||| | |||||| |||||||| | ||||||||||||||||||||||||    
T  15498693 ctttcacatttgaaagagtaattttttaaataatgataaattaaagcttatgattaatatatttttaattt 15498763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 31428975 - 31428913
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||||||||||| || | |||||||||||||||| ||||||||||| ||||||    
T  31428975 ttttgaaagagtaatttttagagaaagataaattaacgtttatggttaatatatttataattt 31428913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 42759558 - 42759620
Alignment:
Q  220 ttttgaaagagtaa-tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||| |||||||| |||| ||| |||||||||||||||||||||||||||||||    
T  42759558 ttttgaaagagtaaatttttagagaatgataa-ttaacgtttatgattaatatatttttaattt 42759620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 53013747 - 53013699
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  53013747 tttttagagaatgataaattaatgtttatgattaatatatttttaattt 53013699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 15451243 - 15451306
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||||||||| | |||||| |||||||| | ||||||||||||||||| ||||||    
T  15451243 ttttgaaagagtaattttttaaataatgataaattaatgcttatgattaatatatttctaattt 15451306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 28880166 - 28880103
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||| ||||| ||| | || |||||||| ||||||||||||||||||||||||||    
T  28880166 ttttgaaagagtatttttttagagagtgataaattaatgtttatgattaatatatttttaattt 28880103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 49936662 - 49936614
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||||| | ||||||||||||||||||||||||    
T  49936662 tttttagagaatgataaattaatgcttatgattaatatatttttaattt 49936614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 234 - 277
Target Start/End: Original strand, 8828131 - 8828174
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatattttt 277  Q
    |||||||| |||| |||||||| |||||||||||||||||||||    
T  8828131 tttttagagaatgataaattaatgtttatgattaatatattttt 8828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 6836574 - 6836512
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||  || ||||  |||| |||||||| | ||||||||||||||||||||||||    
T  6836574 ttttgaaagagtttttgttagtgaatgataaattaatgcttatgattaatatatttttaattt 6836512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 252 - 282
Target Start/End: Original strand, 52430514 - 52430544
Alignment:
Q  252 ttaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||||||||||||||||||||    
T  52430514 ttaacgtttatgattaatatatttttaattt 52430544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 4441943 - 4441992
Alignment:
Q  233 atttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||| | || |||||||| | ||||||||||||||||||||||||    
T  4441943 atttttagagagtgataaattaatgcttatgattaatatatttttaattt 4441992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 27485168 - 27485232
Alignment:
Q  220 ttttgaaagagtaatt--tttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||| |||||||||||  |||||| |||| ||||| || | ||||||||||||||||||||||||    
T  27485168 tttttaaagagtaattattttagaaaatgataaatgaatgcttatgattaatatatttttaattt 27485232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 40422978 - 40423042
Alignment:
Q  220 ttttgaaagagtaattttt--agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||| |||||  ||| | || ||||||||  |||||||||||||||||||||||||    
T  40422978 ttttgaaagagtattttttttagagagtgataaattaatatttatgattaatatatttttaattt 40423042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 24662656 - 24662716
Alignment:
Q  223 tgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||||| ||| |||| ||||| || | ||||||||||||| ||||||||||    
T  24662656 tgaaagagtaattttttagagaatgataaatcaatgcttatgattaatatttttttaattt 24662716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 41495561 - 41495609
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||| | |||| || ||||| ||||||||||||||||||||||||||    
T  41495561 tttttaaagaatgatagattaatgtttatgattaatatatttttaattt 41495609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 46669866 - 46669914
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||| | | ||||||||||||||||||||||||    
T  46669866 tttttagagaatgataaatttatgcttatgattaatatatttttaattt 46669914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 51431104 - 51431056
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||| |||  |||||||||||||||||||||||||    
T  51431104 tttttagagaatgataaagtaatatttatgattaatatatttttaattt 51431056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 3394136 - 3394073
Alignment:
Q  220 ttttgaaagagtaattttta-gataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||||||||| || |||| |||||||| ||||||||||||||||||||| ||||    
T  3394136 ttttgaaagagtaatttttaagagaatgataaattaatgtttatgattaatatattttttattt 3394073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 277
Target Start/End: Complemental strand, 37388454 - 37388396
Alignment:
Q  220 ttttgaaagagtaa-tttttagataatggtaaattaacgtttatgattaatatattttt 277  Q
    |||||||||||||| |||||||| |||| |||||||| |||||||||||||||||||||    
T  37388454 ttttgaaagagtaaatttttagagaatgataaattaaagtttatgattaatatattttt 37388396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 40984995 - 40985043
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||||||    
T  40984995 tttttagagaatgataaattaatgtttatgattaatatatttttaattt 40985043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 13537517 - 13537454
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||||||||| ||| |||  |||||||| | ||||||||||||||||||||||||    
T  13537517 ttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatatttttaattt 13537454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 13627065 - 13627002
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||||||||| ||| |||  |||||||| | ||||||||||||||||||||||||    
T  13627065 ttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatatttttaattt 13627002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 38404502 - 38404453
Alignment:
Q  233 atttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||| |||||||||||||  |||||||||||||||||||| ||||    
T  38404502 atttttagaaaatggtaaattaatatttatgattaatatattttttattt 38404453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 13258661 - 13258598
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||| ||||| ||| |||| |||||||| | ||| ||||||||||||||||||||    
T  13258661 ttttgaaagagtatttttttagagaatgataaattaatgcttacgattaatatatttttaattt 13258598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 35616735 - 35616672
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||| |||||||||||| ||| | || |||||||| ||||| ||||||||||||||||||||    
T  35616735 ttttgagagagtaattttttagagattgataaattaatgtttaagattaatatatttttaattt 35616672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 35354001 - 35353939
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||| |||| ||| |||||| | |||| ||||||||  |||||||||||||||||||||||||    
T  35354001 tttttaaagtgtattttttatagaatgataaattaatatttatgattaatatatttttaattt 35353939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 13949657 - 13949714
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatattttt 277  Q
    ||||||||| |||| ||||||| |||| ||| |||| | |||||||||||||||||||    
T  13949657 ttttgaaagtgtaaattttagagaatgataagttaatgcttatgattaatatattttt 13949714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 43007859 - 43007810
Alignment:
Q  233 atttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||| |||| |||||||| ||||||||||| | ||||||||||||    
T  43007859 atttttagagaatgataaattaaggtttatgattactctatttttaattt 43007810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 10605078 - 10605126
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||||   |||||||||||||||||||||||||    
T  10605078 tttttagagaatgataaattattatttatgattaatatatttttaattt 10605126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 27085508 - 27085460
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| | || |||||||| | ||||||||||||||||||||||||    
T  27085508 tttttagagagtgataaattaatgcttatgattaatatatttttaattt 27085460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 39405220 - 39405172
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||||| |||| ||||| |||||||||||||||    
T  39405220 tttttagaaaatgataaattaatgtttgtgattgatatatttttaattt 39405172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 9684697 - 9684760
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||||||||| ||| |||| |||||||| | ||||||||||||||||||||||||    
T  9684697 ttttgaaagagtaattttttagaaaatgataaattaatgcttatgattaatatatttttaattt 9684760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 9096485 - 9096423
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||||| |||| |||||||| |||| |||||||||||||||||||||    
T  9096485 ttttgaaaaagtattttttagagaatgataaattaatgtttttgattaatatatttttaattt 9096423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 19389734 - 19389797
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||| |||||||| ||| |||| |||||||| | ||||||||||||||||||||||||    
T  19389734 ttttgaaagattaattttttagagaatgataaattaatgcttatgattaatatatttttaattt 19389797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 28154851 - 28154802
Alignment:
Q  233 atttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||| ||||    
T  28154851 atttttagagaatgataaattaatgtttatgattaatatattttttattt 28154802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 28523778 - 28523730
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||| | |||| |||||||| ||||||||||||||||||||||||||    
T  28523778 tttttaaagaatgataaattaatgtttatgattaatatatttttaattt 28523730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 32824808 - 32824760
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||  |||||||| ||||||||||||||||||||||||||    
T  32824808 tttttagagaataataaattaatgtttatgattaatatatttttaattt 32824760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 344209 - 344146
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||||||||| ||| ||| ||||||||| |||||| |||||| ||||||||||||    
T  344209 ttttgaaaaagtaattttttagagaattgtaaattaatgtttataattaatgtatttttaattt 344146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 3924762 - 3924825
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||| ||||||||||||| ||| |||| |||||||| ||||| ||||| ||||||||||||||    
T  3924762 ttttggaagagtaattttttagagaatgataaattaatgtttaagattactatatttttaattt 3924825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 39012005 - 39011943
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||  | |||||||| | || |||||||| | ||||||||||||||||||||||||    
T  39012005 ttttgaaagatgattttttagagagtgataaattaatgcttatgattaatatatttttaattt 39011943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 282
Target Start/End: Complemental strand, 6491341 - 6491296
Alignment:
Q  237 ttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||| |||| |||||||| | ||||||||||||||||||||||||    
T  6491341 ttagagaatgataaattaatgcttatgattaatatatttttaattt 6491296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 2021140 - 2021092
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||    
T  2021140 tttttagagaatgataaattaatatttatgattaatatacttttaattt 2021092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 282
Target Start/End: Complemental strand, 7147547 - 7147507
Alignment:
Q  242 taatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||| |||||||| |||||||||||| |||||||||||||    
T  7147547 taatgataaattaatgtttatgattaaaatatttttaattt 7147507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 15399975 - 15399927
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| || |||||  |||||||||||||||||||||||||    
T  15399975 tttttagagaatgctagattaatttttatgattaatatatttttaattt 15399927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 35042364 - 35042316
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||||| ||||||||| | ||||||||||||||    
T  35042364 tttttagagaatgataaattaatgtttatgatcactatatttttaattt 35042316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 282
Target Start/End: Complemental strand, 37909159 - 37909103
Alignment:
Q  226 aagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||| |||||||| |||| |||||||| |||||| ||| ||| |||||||||||    
T  37909159 aagagtattttttagagaatgataaattaatgtttataattgataaatttttaattt 37909103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 31651351 - 31651414
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||||||||| ||| |||| |||||||| | ||||||||||||||||||||||||    
T  31651351 ttttgaaagagtaattttttagagaatgttaaattaatgcttatgattaatatatttttaattt 31651414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 32859004 - 32858942
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||||||||||| |||| ||||||||   ||| ||||||||||||||||||||    
T  32859004 ttttgaaagagtaatttttagagaatgataaattaatacttacgattaatatatttttaattt 32858942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 1132841 - 1132904
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||||||||| ||| |||| |||||||| ||| ||| ||||||||||||||||||    
T  1132841 ttttgaaagagtaattttttagagaatgataaattaatgttcatggttaatatatttttaattt 1132904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 4247292 - 4247229
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||| |||||||||||||| ||| |||| |||||||| | ||||||||||||||||||||||||    
T  4247292 tttttaaagagtaattttttagagaatgataaattaatgcttatgattaatatatttttaattt 4247229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 13638601 - 13638538
Alignment:
Q  220 ttttgaaagagta-atttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||| |||||||| ||||||||| |||| |||||||| | ||||||||||||||||||||||||    
T  13638601 ttttaaaagagtacatttttagagaatgataaattaatgcttatgattaatatatttttaattt 13638538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 54089360 - 54089424
Alignment:
Q  220 ttttgaaagagtaattttt--agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||||||||  | | |||| |||||||| ||| ||||||||||||||||||||||    
T  54089360 ttttgaaagagtaattttttaaaaaaatgataaattaatgttaatgattaatatatttttaattt 54089424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 30697531 - 30697483
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||| ||| ||||||||||||||||||||||||||    
T  30697531 tttttagagaatgataaactaatgtttatgattaatatatttttaattt 30697483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 42134611 - 42134659
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||| ||| ||||||||||||||||||||||||||    
T  42134611 tttttagagaatgctaaactaatgtttatgattaatatatttttaattt 42134659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 49304368 - 49304320
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||| | |||| |||||||| ||||||||||||||||||||||||||    
T  49304368 tttttaaagaatgataaattaatgtttatgattaatatatttttaattt 49304320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 45898607 - 45898670
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||||||||| ||| | || |||||||| ||||||| |||||||||||| |||||    
T  45898607 ttttgaaagagtaattttttagaaagtgttaaattaatgtttatgcttaatatattttaaattt 45898670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 27681977 - 27681915
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| | || |||||||| | || |||||||| | ||||||||||||||||||||||||    
T  27681977 ttttgaaaaaatattttttagagagtgataaattaatgcttatgattaatatatttttaattt 27681915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 282
Target Start/End: Original strand, 32720990 - 32721051
Alignment:
Q  222 ttgaaagagtaatttt-tagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||| |||| |||| | || |||||||| | ||||||||||||||||||||||||    
T  32720990 ttgaaagagtatttttgtagagagtgataaattaatgcttatgattaatatatttttaattt 32721051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 33145261 - 33145310
Alignment:
Q  233 atttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||| |||||||| |||| | ||||||||||||| |||||    
T  33145261 atttttagataatgttaaattaatgtttgtaattaatatattttgaattt 33145310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 48444665 - 48444617
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| | || ||||| || ||||||||||||||||||||||||||    
T  48444665 tttttagagagtgataaatcaatgtttatgattaatatatttttaattt 48444617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 54372497 - 54372545
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||| | |||| |||||||||| |||| |||||||||||||||||||    
T  54372497 tttttacagaatgataaattaacgcttataattaatatatttttaattt 54372545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 54748471 - 54748423
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| | || |||||||| | ||||||||||||||||||||||||    
T  54748471 tttttagagagtgataaattaatgcttatgattaatatatttttaattt 54748423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 36907443 - 36907395
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  36907443 tttttagataatgataaattaatgtttatgattactatatttttaattt 36907395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 223 - 282
Target Start/End: Complemental strand, 45510514 - 45510454
Alignment:
Q  223 tgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||||| ||| |||| |||||||| |||||||||||||||||||| |||||    
T  45510514 tgaaagagtaattttttagagaatgataaattaatgtttatgattaatatattttaaattt 45510454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 4787908 - 4787972
Alignment:
Q  220 ttttgaaagagtaattttt--agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||||||||  ||| | || |||||||| | ||||||||||||||||||||||||    
T  4787908 ttttgaaagagtaatttttttagagagtgataaattaatgcttatgattaatatatttttaattt 4787972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 374457 - 374505
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||  ||| |||| ||||||||||||||||||||||||||    
T  374457 tttttagataataataatttaatgtttatgattaatatatttttaattt 374505  T

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Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 24923315 - 24923363
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||||| | ||||||||||||||||||||||||    
T  24923315 tttttagagaatgataaattaatgattatgattaatatatttttaattt 24923363  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 12863559 - 12863622
Alignment:
Q  220 ttttgaaagagtaattttt-agataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||  ||||||| |||||||| |||||||| | |||| |||||||||||||||||||    
T  12863559 ttttgaaagaccaatttttcagataatgataaattaatgcttataattaatatatttttaattt 12863622  T

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Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 10591811 - 10591873
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||| |||||||| |||||||| |||| |||||||| |  |||||||| ||||||||||||||    
T  10591811 ttttaaaagagtagtttttagagaatgataaattaatgcatatgattactatatttttaattt 10591873  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 248 - 282
Target Start/End: Complemental strand, 38987539 - 38987505
Alignment:
Q  248 taaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| ||||||||||||||||||||||||||    
T  38987539 taaattaatgtttatgattaatatatttttaattt 38987505  T

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Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 282
Target Start/End: Original strand, 38991393 - 38991442
Alignment:
Q  233 atttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||| |||| |||||||| |||||| |||||||||||||| ||||    
T  38991393 atttttagagaatgataaattaaagtttataattaatatattttttattt 38991442  T

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Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 23329366 - 23329318
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||| ||||||||   ||||||||| ||||||||||||||    
T  23329366 tttttagataatgataaattaatagttatgattattatatttttaattt 23329318  T

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Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 282
Target Start/End: Original strand, 33187752 - 33187816
Alignment:
Q  219 cttttgaaagagtaattt-ttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||| ||| |||||   || |||||||| | ||||||||||||||||||||||||    
T  33187752 cttttgaaagagtattttcttagagggtgataaattaatgcttatgattaatatatttttaattt 33187816  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Original strand, 37334843 - 37334902
Alignment:
Q  220 ttttgaaagagtaatttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||||||||||||||   ||| | ||||||||  ||||||||||||| |||||||||||    
T  37334843 ttttgaaagagtaattttt---taacgataaattaatctttatgattaataaatttttaattt 37334902  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 38138091 - 38138043
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||||||| |||| |||||||| | |||||||||||| |||||||||||    
T  38138091 tttttagagaatgataaattaatgcttatgattaatacatttttaattt 38138043  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 41002172 - 41002220
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||| |||| |||   ||||||||||||||||||||||||    
T  41002172 tttttagataatgataaactaatacttatgattaatatatttttaattt 41002220  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 42220200 - 42220152
Alignment:
Q  234 tttttagataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    ||||||||||||| |||| |||   ||||||||||||||||||||||||    
T  42220200 tttttagataatgataaactaatacttatgattaatatatttttaattt 42220152  T

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Target: scaffold0245 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 4321 - 4258
Alignment:
Q  220 ttttgaaagagtaatttttag-ataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||| |||||||||||||| | | |||| |||||||| | ||||||||||||||||||||||||    
T  4321 ttttaaaagagtaattttttggagaatgataaattaatgcttatgattaatatatttttaattt 4258  T

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Target: scaffold0229 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 4652 - 4589
Alignment:
Q  220 ttttgaaagagtaatttttag-ataatggtaaattaacgtttatgattaatatatttttaattt 282  Q
    |||| |||||||||||||| | | |||| |||||||| | ||||||||||||||||||||||||    
T  4652 ttttaaaagagtaattttttggagaatgataaattaatgcttatgattaatatatttttaattt 4589  T

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