View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19782_low_56 (Length: 271)
Name: NF19782_low_56
Description: NF19782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19782_low_56 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 249
Target Start/End: Original strand, 41310805 - 41311036
Alignment:
| Q |
17 |
gttagttagttccactctttgttgtttcttcttgttaatctaaattttgagtacgtataattattttgacacattaaagattcctcttcttatcttatgc |
116 |
Q |
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| T |
41310805 |
gttagttagttccactctttgttgtttcttcttgttaatctaaattttgagtacgtataattattttgacacattaaagattcctcttcttatcttatgc |
41310904 |
T |
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| Q |
117 |
tttgaccatattttcataacatataaattcttgtgtggtgctgtatcaagcgataactttttcccgaattaatccagaagccttacgtgtcctttgctta |
216 |
Q |
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| T |
41310905 |
tttgaccatattttcgtaacatataaattcttgtgtggtgctgtatcaagcgataactttttcccgaattaatccagaagccttacgtgtcctttgctta |
41311004 |
T |
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| Q |
217 |
aaggaatggggggccttgctggaaaaaactttt |
249 |
Q |
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||||||| ||||||||||||||||| ||||||| |
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| T |
41311005 |
aaggaat-gggggccttgctggaaataactttt |
41311036 |
T |
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