View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19782_low_76 (Length: 238)
Name: NF19782_low_76
Description: NF19782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19782_low_76 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 41405251 - 41405472
Alignment:
| Q |
17 |
aaaccctttgcattcaactacaaactcaaaccaatgcctaaagggaactatcttgttaaagaagtatgggatagtgttagttcatatttgaggttgagac |
116 |
Q |
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| T |
41405251 |
aaaccctttgcattcaactacaaactcaaaccaatgcctaaagggaactatcttgttaaagaagtatgggatagtgttagttcatatttgaggttgagac |
41405350 |
T |
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| Q |
117 |
cagagttagatcaaacgttagatgacgtcattggtcgtgatttgacaaaaggaagtggttggatgaatcttcaacaggaagaggagtgtgtatcacttga |
216 |
Q |
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| T |
41405351 |
cagagttagatcaaacgttagatgacgtcgttggtcgtgatttgacaaaaggaagtggttggatgaatcttcaacaggaagaggagtgtgtatcacttga |
41405450 |
T |
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| Q |
217 |
acttgaggaaatgatcattgat |
238 |
Q |
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|||||||||||||||||||||| |
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| T |
41405451 |
acttgaggaaatgatcattgat |
41405472 |
T |
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