View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19782_low_83 (Length: 232)
Name: NF19782_low_83
Description: NF19782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19782_low_83 |
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Alignment Details
Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 22 - 217
Target Start/End: Complemental strand, 52558483 - 52558289
Alignment:
| Q |
22 |
cttatttccctctaaacaatgaaatcaacggttctctcccccctttctccaggtttaacatttctcttatatcattatatgtatttatctgtatgtaata |
121 |
Q |
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| T |
52558483 |
cttatttccctctaaacaatgaaatcaacggttctctccccc-tttctccaggtttaacatttctcttatatcattatatgtatttatctgtatgtaata |
52558385 |
T |
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| Q |
122 |
aaacagcatcaagaaagagccattttaccagcctcagttacatctcctttaaaataagaaacaactgtcttgtaaaatgtatctgtgtaagatagc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52558384 |
aaacagcatcaagaaagagccattttaccagcctcagttacatctcctttaaaataagaaacaactgtcttgtaaaatgtatctgtgtaagatagc |
52558289 |
T |
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