View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19782_low_91 (Length: 210)

Name: NF19782_low_91
Description: NF19782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19782_low_91
NF19782_low_91
[»] chr7 (33 HSPs)
chr7 (15-194)||(24566-24748)
chr7 (15-188)||(42516866-42517040)
chr7 (15-188)||(44219504-44219678)
chr7 (15-188)||(19157694-19157866)
chr7 (15-188)||(20757093-20757265)
chr7 (15-188)||(13426502-13426676)
chr7 (15-188)||(34595529-34595703)
chr7 (15-188)||(35026444-35026617)
chr7 (15-188)||(22364862-22365035)
chr7 (15-118)||(40729133-40729236)
chr7 (15-188)||(44483228-44483403)
chr7 (15-188)||(19476392-19476567)
chr7 (15-119)||(31579641-31579745)
chr7 (15-119)||(34487211-34487315)
chr7 (50-118)||(19476639-19476707)
chr7 (50-119)||(22954576-22954645)
chr7 (50-118)||(829926-829994)
chr7 (50-118)||(1195106-1195174)
chr7 (50-188)||(24355-24494)
chr7 (50-188)||(19157938-19158077)
chr7 (50-188)||(20757337-20757476)
chr7 (50-119)||(40729308-40729377)
chr7 (50-119)||(42517112-42517181)
chr7 (50-119)||(44483471-44483540)
chr7 (19-118)||(22954410-22954509)
chr7 (50-117)||(34487387-34487454)
chr7 (50-117)||(34595390-34595457)
chr7 (50-119)||(31579500-31579569)
chr7 (135-188)||(40729091-40729144)
chr7 (50-117)||(44219365-44219432)
chr7 (50-119)||(22364723-22364791)
chr7 (50-119)||(35026689-35026758)
chr7 (140-188)||(34487141-34487189)
[»] chr4 (44 HSPs)
chr4 (15-188)||(5720952-5721125)
chr4 (15-188)||(16959974-16960148)
chr4 (15-188)||(989285-989459)
chr4 (15-188)||(22487219-22487393)
chr4 (15-188)||(37815340-37815514)
chr4 (15-188)||(43749946-43750120)
chr4 (15-188)||(11021672-11021846)
chr4 (15-188)||(13683003-13683177)
chr4 (15-188)||(17107431-17107605)
chr4 (15-188)||(2184604-2184779)
chr4 (15-188)||(4712178-4712351)
chr4 (15-188)||(9301779-9301952)
chr4 (15-188)||(12792782-12792955)
chr4 (15-119)||(17865045-17865149)
chr4 (15-119)||(46480986-46481090)
chr4 (15-187)||(26314685-26314858)
chr4 (15-187)||(46081584-46081757)
chr4 (21-188)||(13493100-13493269)
chr4 (15-188)||(39385371-39385546)
chr4 (15-119)||(16491716-16491820)
chr4 (15-190)||(32592953-32593125)
chr4 (50-188)||(4712423-4712561)
chr4 (50-188)||(17865221-17865360)
chr4 (19-117)||(43750161-43750259)
chr4 (15-116)||(20045874-20045975)
chr4 (50-188)||(37815586-37815726)
chr4 (50-117)||(12792643-12792710)
chr4 (50-188)||(13492883-13493022)
chr4 (50-119)||(22487465-22487534)
chr4 (50-119)||(32592812-32592881)
chr4 (50-188)||(16959762-16959902)
chr4 (19-93)||(13683218-13683292)
chr4 (130-188)||(17864946-17865004)
chr4 (50-119)||(2184464-2184532)
chr4 (29-117)||(9301641-9301729)
chr4 (54-117)||(17107681-17107744)
chr4 (52-119)||(26314545-26314611)
chr4 (134-188)||(46480945-46480999)
chr4 (50-91)||(16491892-16491933)
chr4 (50-107)||(46481162-46481219)
chr4 (50-117)||(20046047-20046114)
chr4 (49-118)||(6100550-6100619)
chr4 (50-119)||(11021918-11021987)
chr4 (50-117)||(5721197-5721265)
[»] chr6 (36 HSPs)
chr6 (15-189)||(8926185-8926360)
chr6 (15-189)||(8936442-8936617)
chr6 (15-188)||(5923825-5924000)
chr6 (15-188)||(19661559-19661733)
chr6 (15-188)||(3345229-3345403)
chr6 (15-188)||(30609076-30609250)
chr6 (17-186)||(33783609-33783780)
chr6 (15-188)||(31717174-31717348)
chr6 (15-119)||(29819455-29819559)
chr6 (15-119)||(3484853-3484957)
chr6 (15-188)||(28853483-28853658)
chr6 (15-111)||(17238111-17238207)
chr6 (15-186)||(16525197-16525366)
chr6 (15-92)||(5404666-5404743)
chr6 (19-119)||(17238248-17238348)
chr6 (50-119)||(30608935-30609004)
chr6 (19-188)||(19661349-19661518)
chr6 (50-119)||(31717420-31717489)
chr6 (50-118)||(3345090-3345158)
chr6 (50-118)||(16525438-16525506)
chr6 (50-117)||(3485019-3485086)
chr6 (50-188)||(5404815-5404954)
chr6 (50-188)||(26272225-26272364)
chr6 (50-119)||(28853730-28853799)
chr6 (135-188)||(29819414-29819467)
chr6 (50-118)||(5924072-5924140)
chr6 (130-186)||(5404601-5404657)
chr6 (50-119)||(8926432-8926503)
chr6 (50-119)||(8936689-8936760)
chr6 (50-117)||(29819631-29819698)
chr6 (28-118)||(33783467-33783557)
chr6 (134-187)||(5140690-5140743)
chr6 (50-119)||(9571641-9571710)
chr6 (138-188)||(3484782-3484832)
chr6 (130-188)||(5409221-5409279)
chr6 (135-188)||(17238031-17238084)
[»] chr2 (50 HSPs)
chr2 (15-188)||(14379323-14379497)
chr2 (15-188)||(19204591-19204765)
chr2 (15-188)||(18369223-18369396)
chr2 (15-188)||(38873473-38873645)
chr2 (15-188)||(13572471-13572644)
chr2 (15-187)||(3371302-3371475)
chr2 (18-186)||(7877537-7877707)
chr2 (15-188)||(28921193-28921366)
chr2 (15-188)||(12806547-12806722)
chr2 (15-190)||(41594161-41594337)
chr2 (15-188)||(2395156-2395330)
chr2 (15-188)||(29683175-29683347)
chr2 (15-189)||(6880183-6880358)
chr2 (15-188)||(17457928-17458102)
chr2 (15-188)||(30432805-30432979)
chr2 (15-107)||(30771149-30771241)
chr2 (15-116)||(4171597-4171698)
chr2 (15-188)||(6164108-6164282)
chr2 (15-119)||(33940887-33940991)
chr2 (15-188)||(10748704-10748875)
chr2 (15-188)||(37609166-37609339)
chr2 (15-186)||(3948574-3948747)
chr2 (29-188)||(25318518-25318678)
chr2 (15-188)||(32521473-32521648)
chr2 (15-87)||(42705053-42705125)
chr2 (50-189)||(29683419-29683559)
chr2 (50-119)||(7877393-7877462)
chr2 (50-188)||(18369012-18369151)
chr2 (19-119)||(4171739-4171839)
chr2 (51-117)||(19204838-19204904)
chr2 (50-119)||(3948433-3948502)
chr2 (50-188)||(12806794-12806933)
chr2 (50-119)||(28921438-28921507)
chr2 (50-118)||(3371547-3371615)
chr2 (19-119)||(6880042-6880142)
chr2 (50-119)||(10748563-10748632)
chr2 (50-119)||(41594020-41594089)
chr2 (50-119)||(42705197-42705266)
chr2 (50-117)||(30432667-30432733)
chr2 (19-117)||(17457789-17457887)
chr2 (50-116)||(37609028-37609094)
chr2 (50-119)||(14379182-14379251)
chr2 (50-188)||(33940680-33940819)
chr2 (50-118)||(32521720-32521788)
chr2 (50-117)||(6163969-6164036)
chr2 (50-188)||(2395402-2395541)
chr2 (131-188)||(42704988-42705044)
chr2 (142-188)||(13278063-13278110)
chr2 (50-119)||(13572716-13572785)
chr2 (19-91)||(25318413-25318485)
[»] chr1 (36 HSPs)
chr1 (15-188)||(20062008-20062182)
chr1 (15-188)||(33619106-33619280)
chr1 (15-188)||(50624765-50624939)
chr1 (15-188)||(14602009-14602183)
chr1 (15-188)||(28031646-28031820)
chr1 (15-188)||(26244548-26244722)
chr1 (15-188)||(50096132-50096306)
chr1 (20-188)||(18963608-18963777)
chr1 (15-188)||(47828962-47829135)
chr1 (15-188)||(10913774-10913947)
chr1 (15-188)||(33556-33730)
chr1 (15-188)||(37172458-37172632)
chr1 (15-119)||(42154819-42154923)
chr1 (15-119)||(43191866-43191970)
chr1 (15-188)||(12322091-12322265)
chr1 (15-118)||(39288364-39288467)
chr1 (19-119)||(50096347-50096447)
chr1 (50-188)||(50625011-50625148)
chr1 (50-188)||(20061797-20061936)
chr1 (50-188)||(28031892-28032031)
chr1 (50-119)||(43191725-43191794)
chr1 (19-119)||(10913988-10914088)
chr1 (50-117)||(26244794-26244861)
chr1 (19-118)||(47829176-47829275)
chr1 (50-119)||(42154995-42155064)
chr1 (50-188)||(14602255-14602392)
chr1 (50-117)||(37172319-37172386)
chr1 (85-188)||(50616938-50617042)
chr1 (62-119)||(39027550-39027607)
chr1 (50-117)||(39288224-39288292)
chr1 (50-117)||(12322337-12322404)
chr1 (66-201)||(39027606-39027742)
chr1 (50-119)||(33802-33871)
chr1 (135-194)||(42154773-42154831)
chr1 (50-108)||(33618976-33619034)
chr1 (44-93)||(51999570-51999619)
[»] chr3 (38 HSPs)
chr3 (15-188)||(27934450-27934624)
chr3 (15-188)||(29838504-29838678)
chr3 (15-188)||(52835544-52835718)
chr3 (15-195)||(50645464-50645645)
chr3 (15-186)||(16056350-16056521)
chr3 (15-188)||(49499842-49500016)
chr3 (15-187)||(42093605-42093777)
chr3 (15-188)||(46962792-46962966)
chr3 (15-186)||(38807539-38807711)
chr3 (23-188)||(27284969-27285135)
chr3 (15-188)||(33162530-33162704)
chr3 (16-188)||(7029384-7029557)
chr3 (15-187)||(14546046-14546219)
chr3 (19-186)||(21323101-21323270)
chr3 (15-187)||(26582822-26582995)
chr3 (15-188)||(32315586-32315759)
chr3 (15-117)||(55092278-55092380)
chr3 (16-188)||(49121714-49121888)
chr3 (15-100)||(17110061-17110146)
chr3 (50-119)||(49500088-49500157)
chr3 (51-117)||(32315447-32315513)
chr3 (50-119)||(17109920-17109989)
chr3 (50-117)||(52835790-52835857)
chr3 (50-119)||(42093464-42093533)
chr3 (50-119)||(46962651-46962720)
chr3 (50-119)||(50645717-50645786)
chr3 (19-119)||(889197-889297)
chr3 (50-117)||(14545906-14545974)
chr3 (50-118)||(29838364-29838432)
chr3 (50-109)||(26582691-26582750)
chr3 (50-119)||(33162389-33162458)
chr3 (50-119)||(55092452-55092521)
chr3 (19-118)||(27285183-27285282)
chr3 (50-117)||(27934696-27934763)
chr3 (50-189)||(38807783-38807923)
chr3 (137-187)||(17109747-17109797)
chr3 (130-188)||(19590437-19590495)
chr3 (130-188)||(55092204-55092262)
[»] scaffold0817 (2 HSPs)
scaffold0817 (15-188)||(3982-4156)
scaffold0817 (50-188)||(4227-4366)
[»] chr8 (38 HSPs)
chr8 (15-188)||(6943656-6943830)
chr8 (15-188)||(13154238-13154412)
chr8 (15-188)||(26479504-26479678)
chr8 (15-185)||(31685672-31685843)
chr8 (18-188)||(6891778-6891948)
chr8 (15-188)||(18764495-18764669)
chr8 (15-188)||(220512-220685)
chr8 (15-188)||(689667-689840)
chr8 (15-188)||(734135-734308)
chr8 (15-188)||(858031-858204)
chr8 (15-188)||(31403123-31403297)
chr8 (15-193)||(31186368-31186546)
chr8 (15-188)||(9180044-9180218)
chr8 (15-119)||(24332331-24332435)
chr8 (15-188)||(2835124-2835298)
chr8 (15-92)||(3272816-3272893)
chr8 (15-119)||(13405517-13405621)
chr8 (15-95)||(37586227-37586307)
chr8 (50-188)||(3272965-3273104)
chr8 (50-119)||(13405693-13405762)
chr8 (50-119)||(31685916-31685985)
chr8 (19-118)||(24332476-24332574)
chr8 (50-119)||(9180290-9180359)
chr8 (50-119)||(13154484-13154553)
chr8 (19-119)||(31186587-31186687)
chr8 (130-188)||(3272748-3272806)
chr8 (18-88)||(27993490-27993560)
chr8 (18-88)||(28050792-28050862)
chr8 (53-188)||(26479325-26479460)
chr8 (50-119)||(31402982-31403051)
chr8 (53-188)||(2835342-2835477)
chr8 (50-118)||(6892023-6892090)
chr8 (30-70)||(20112533-20112573)
chr8 (50-93)||(37586113-37586156)
chr8 (50-119)||(6943902-6943971)
chr8 (50-119)||(18764354-18764423)
chr8 (141-186)||(37586353-37586398)
chr8 (130-186)||(31186670-31186726)
[»] chr5 (33 HSPs)
chr5 (15-188)||(10461555-10461729)
chr5 (15-188)||(6542469-6542642)
chr5 (18-188)||(14868676-14868843)
chr5 (15-186)||(18786191-18786362)
chr5 (18-188)||(43197114-43197285)
chr5 (15-188)||(15969429-15969603)
chr5 (15-188)||(5933335-5933509)
chr5 (17-187)||(3598413-3598584)
chr5 (15-188)||(24491053-24491227)
chr5 (15-187)||(41137141-41137314)
chr5 (15-186)||(4122787-4122959)
chr5 (15-117)||(6497263-6497365)
chr5 (15-188)||(22394334-22394508)
chr5 (15-117)||(29991173-29991275)
chr5 (16-188)||(40588861-40589033)
chr5 (33-188)||(40589481-40589636)
chr5 (15-100)||(7133213-7133298)
chr5 (50-186)||(18785983-18786119)
chr5 (50-119)||(3598658-3598727)
chr5 (50-188)||(24490843-24490981)
chr5 (50-117)||(5933196-5933263)
chr5 (50-117)||(10461416-10461483)
chr5 (50-119)||(7133370-7133439)
chr5 (51-188)||(22394123-22394261)
chr5 (50-117)||(4122648-4122715)
chr5 (50-119)||(14868918-14868986)
chr5 (19-188)||(6497406-6497576)
chr5 (50-117)||(15969675-15969742)
chr5 (50-119)||(6542328-6542397)
chr5 (50-119)||(43196970-43197039)
chr5 (28-117)||(29991325-29991414)
chr5 (50-118)||(25329167-25329235)
chr5 (50-92)||(41137386-41137428)
[»] scaffold0167 (1 HSPs)
scaffold0167 (15-188)||(4597-4771)
[»] scaffold0006 (2 HSPs)
scaffold0006 (15-188)||(212622-212796)
scaffold0006 (50-188)||(212411-212550)
[»] scaffold0103 (2 HSPs)
scaffold0103 (15-188)||(43487-43662)
scaffold0103 (50-118)||(43347-43415)
[»] scaffold0170 (2 HSPs)
scaffold0170 (15-184)||(8752-8922)
scaffold0170 (50-119)||(8611-8680)
[»] scaffold0147 (3 HSPs)
scaffold0147 (15-188)||(25122-25296)
scaffold0147 (50-119)||(25356-25425)
scaffold0147 (130-188)||(25462-25520)
[»] scaffold0126 (2 HSPs)
scaffold0126 (15-188)||(36204-36377)
scaffold0126 (50-119)||(36063-36132)
[»] scaffold0021 (2 HSPs)
scaffold0021 (18-187)||(118029-118198)
scaffold0021 (50-119)||(118277-118346)
[»] scaffold0137 (3 HSPs)
scaffold0137 (15-92)||(36975-37052)
scaffold0137 (50-188)||(36766-36903)
scaffold0137 (130-188)||(37061-37119)
[»] scaffold0028 (3 HSPs)
scaffold0028 (15-96)||(74007-74088)
scaffold0028 (50-119)||(74159-74228)
scaffold0028 (130-188)||(73932-73990)
[»] scaffold0045 (1 HSPs)
scaffold0045 (130-188)||(43909-43967)


Alignment Details
Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 15 - 194
Target Start/End: Original strand, 24566 - 24748
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24566 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 24665  T
Q  115 aaacc---nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagcgataat 194  Q
    |||||             ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24666 aaaccaaaaaaaaaaaaatttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccgtatttaagcgataat 24748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 42517040 - 42516866
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  42517040 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggacta 42516941  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||| ||||||||||||| || |||||||||| ||||||||||||||||||||||    
T  42516940 aaaccaaaaaaatatttttataggaactaaaaccaaaatgccagatatttgcagggaccatttccatatttaagc 42516866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 44219504 - 44219678
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44219504 atgaatactagagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagggccaaaaccaaatattctatttttgcagggacta 44219603  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  44219604 aaaccaaaaaaatatttttatagggaataaaaccaaaacgcaagatatttgcagggactatttccatatttaagc 44219678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 19157866 - 19157694
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19157866 atgaatattacagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 19157767  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  19157766 aaaccaaaaaaaaaa-ttataaggactaaaaccaatacgccagatatttgcagggaccatttccatatttaagc 19157694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 20757265 - 20757093
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20757265 atgaatattacagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 20757166  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  20757165 aaaccaaaaaaaaaa-ttataaggactaaaaccaatacgccagatatttgcagggaccatttccatatttaagc 20757093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 13426502 - 13426676
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13426502 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 13426601  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||| |||||||||||| ||||||  |||||||||| ||||||||| ||||||||||||    
T  13426602 aaaccaaaaaaatatttttagagggactaaaactaaaacgtcagatatttgcagggaccattcccatatttaagc 13426676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 34595529 - 34595703
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  34595529 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaatataccaaggaccaaaaccaaatattctatatttgcagggacta 34595628  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    || ||           ||||||||||||||||||||||||  |||||||| | |||||||||| |||||||||||    
T  34595629 aagccaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttacagggaccattttcatatttaagc 34595703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 35026617 - 35026444
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||| ||||||    
T  35026617 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaatgatcaaaaccaaatattctatatttgcatggacta 35026518  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||           |||| |||||||||||||||||||  |||| ||||| ||||||||||||||||||||||    
T  35026517 aaacaaaaaaaaatttttacagggactaaaaccaaaacgtcagatgtttgcagggaccatttccatatttaagc 35026444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 22364862 - 22365035
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  22364862 atgaatattatagg-accaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 22364960  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||  |||||||||||||| |||||||||||||  | |||||||||||||||||||    
T  22364961 aaaccaaaaaaatatttttataaagactaaaaccaaaatgcaagatatttgcaagaaccatttccatatttaagc 22365035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 40729236 - 40729133
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40729236 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 40729137  T
Q  115 aaac 118  Q
    ||||    
T  40729136 aaac 40729133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 44483403 - 44483228
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| ||    
T  44483403 atgaatattatagggactaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaaggactaaaaccaaatattctatatttgcagggatta 44483304  T
Q  115 aaacc--nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |            ||||||||||||||||||||||||  |||||||||| ||||||||||||||||| ||||    
T  44483303 aaatcaaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttgcagggaccatttccatattaaagc 44483228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 19476567 - 19476392
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||| ||||||| |||||||||||||||| |||||||  |||||||||| |||||||||||||||||||| |||||||||||||    
T  19476567 atgaatattatagggaccaacttcaatatgaaatgattttacaag-attaaaattaaataccaagaaccaaaaccaaatattctatatttgcagggacta 19476469  T
Q  115 aaac---cnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||              ||||||||||||||||||||||||| | ||||| || ||||||||||||||||||||||    
T  19476468 aaacaaaaaaaaaatatttttatagggactaaaaccaaaacgccaaatattggcagggaccatttccatatttaagc 19476392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 31579641 - 31579745
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||    
T  31579641 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaatcaaatattttatatttgcagggacta 31579740  T
Q  115 aaacc 119  Q
    |||||    
T  31579741 aaacc 31579745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 34487315 - 34487211
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||    
T  34487315 atgaatattatagagaccaatttcaatatgaaatgattttacaacgattaaaacaaaataccaaagacaaaaaccaaatattctatatttgcagagacta 34487216  T
Q  115 aaacc 119  Q
    |||||    
T  34487215 aaacc 34487211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 19476639 - 19476707
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19476639 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaac 19476707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 22954576 - 22954645
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  22954576 attttacaaggattaaaacaaaataccaaagaccaaaatcaaatattctatatttgcagggactaaaacc 22954645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 829926 - 829994
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||    
T  829926 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactgaaac 829994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 1195106 - 1195174
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||||||| ||||    
T  1195106 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactgaaac 1195174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 24494 - 24355
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-nnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||||||| ||||||||||||| |||| |||||||| ||| || ||| ||||||||||||||||||           |||| ||||||||||||||    
T  24494 attttacaaggaataaaacaaaatacaaaggtccaaaacccaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 24395  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||||| ||||| |||| |||||||||||    
T  24394 aaatgtcagatatttgccgggactattttcatatttaagc 24355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 19157938 - 19158077
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac-cnnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||| ||| ||||||||||||||||||||||||||||||  || ||| |||||||||||||||||            |||| ||||||||||||||    
T  19157938 attttacagggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaacca 19158037  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||||| ||||| |||| |||||||||||    
T  19158038 aaatgtcagatatttgcagggactattttcatatttaagc 19158077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 20757337 - 20757476
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac-cnnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||| ||| ||||||||||||||||||||||||||||||  || ||| |||||||||||||||||            |||| ||||||||||||||    
T  20757337 attttacagggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaacca 20757436  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||||| ||||| |||| |||||||||||    
T  20757437 aaatgtcagatatttgcagggactattttcatatttaagc 20757476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 40729308 - 40729377
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||||||||| |||||||||||||||| ||| || ||| ||||||||||||||||||    
T  40729308 attttacaaggactaaaacaaaacaccaaggaccaaaacccaattttttatatttgcagggactaaaacc 40729377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 42517112 - 42517181
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||||||||||||||||||| |||| ||||| || ||| ||||||||||||||||||    
T  42517112 attttacaaggactaaaacaaaataccaaggactaaaatcaaattttttatatttgcagggactaaaacc 42517181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 44483471 - 44483540
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||||||||||||||| |||||||||||||  || ||| ||||||||||||||||||    
T  44483471 attttacaaggactaaaacaaaataccaatgaccaaaaccaaaatttttatatttgcagggactaaaacc 44483540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 22954509 - 22954410
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||| | ||||||| ||||||| |||   |||||||||||| |||||||||||| ||||||||| |||||| | || ||| |||||||||||||||||    
T  22954509 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccacaaccaatttttttatatttgcagggactaaaac 22954410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 34487387 - 34487454
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| || ||| |||| |||||||||||    
T  34487387 attttacaaggactaaaacaaaataccaaggaccgaaaccaaattttttatatttggagggactaaaa 34487454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 34595457 - 34595390
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || |   ||||||||||||||||    
T  34595457 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttttaatttgcagggactaaaa 34595390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 31579569 - 31579500
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    ||||||||||||  |||||||||||||||||||||||| ||| | || ||| ||||||||||||||||||    
T  31579569 attttacaaggacaaaaacaaaataccaaggaccaaaatcaatttttttatatttgcagggactaaaacc 31579500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 40729144 - 40729091
Alignment:
Q  135 agggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  40729144 agggactaaaacaaaaacgccagatatttgcagggaccatttccatatttaagc 40729091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 44219432 - 44219365
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| || ||| |||  |||||||||||    
T  44219432 attttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttatagggactaaaa 44219365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 22364791 - 22364723
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    ||||| |||||| |||||||||||| |||||||| ||||||||| || ||| ||||||||||||||||||    
T  22364791 attttgcaaggactaaaacaaaatatcaaggacc-aaaccaaattttttatatttgcagggactaaaacc 22364723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 35026689 - 35026758
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||||||||||| |||||||||||||||| | || ||| ||| ||| ||||||||||    
T  35026689 attttacaaggactaaaacaaaatatcaaggaccaaaaccaatttttttatatttacagagactaaaacc 35026758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 34487189 - 34487141
Alignment:
Q  140 ctaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||||||||||||  |||||||||| || ||||||| |||||||||||    
T  34487189 ctaaaaccaaaacggcagatatttgcaggaaccattttcatatttaagc 34487141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 2e-66; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 5721125 - 5720952
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5721125 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 5721026  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||          ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  5721025 aaaccaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaagc 5720952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 16959974 - 16960148
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  16959974 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggatcaaaaccaaatattctatttttgcaaggacta 16960073  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  16960074 aaaccaaaaaaatatttttatagggactaaaaccaaaatgcaagatatttgcagggaccatttccatatttaagc 16960148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 989285 - 989459
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  989285 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaaccaaatattctatatctgcagggacta 989384  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  989385 aaaccaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttgcagggaccatttccatatttaagc 989459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 22487393 - 22487219
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggact- 113  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||     
T  22487393 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagacta 22487294  T
Q  114 aaaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  22487293 aaaacaaaaaaatatttttataaggactaaaaccaaaacaccagatatttgcggggaccatttccatatttaagc 22487219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 37815514 - 37815340
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  37815514 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggacta 37815415  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||||||||||| |||||| || |||||||| | ||||||||||||||||||||||    
T  37815414 aaaccaaaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaagc 37815340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 43750120 - 43749946
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  43750120 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaagcaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 43750021  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||| ||||||| |||||| | |||||||||| ||||||||||||||||||||||    
T  43750020 aaaccaaaaaaatatttttataggaactaaaatcaaaacaccagatatttgcagggaccatttccatatttaagc 43749946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 11021846 - 11021672
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |    
T  11021846 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattttatatttgcagggacca 11021747  T
Q  115 aaa-ccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |           ||||||||||||||||||||||||| |||||||||  |||||||||| |||||||||||    
T  11021746 aaatcaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgtagggaccattttcatatttaagc 11021672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 13683177 - 13683003
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||    
T  13683177 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaagcaaaataccaaggaccaaaaccaaatattctatatttacagggacta 13683078  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||||||||||||||||| |  |||||||||| |||| |||||||||||||||||    
T  13683077 aaaccaaaaaaatatttttatagggactaaaaccaaaatgtcagatatttgcagggatcatttccatatttaagc 13683003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 17107605 - 17107431
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17107605 atgaatattatagggaccaatttcaatatgaaatgattgtacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 17107506  T
Q  115 aaaccnnnnnnnnnnttt-atagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||          ||| | |||||||||||| ||||||| | |||||| | ||||||||||||||||||||||    
T  17107505 aaaccaaaaaaatattttaacagggactaaaactaaaacgccaaatattttcagggaccatttccatatttaagc 17107431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 2184604 - 2184779
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2184604 atgaatattatatggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 2184703  T
Q  115 aaacc-nnnnnnnnnntttatagg-gactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||||  |||||||||||||||  |||||||||| ||||||||||||||||| ||||    
T  2184704 aaaccaaaaaaatatttttataggacactaaaaccaaaacgtcagatatttgcagggaccatttccatattaaagc 2184779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 4712351 - 4712178
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  4712351 atgaatattatagggaccaatttcaatatgaaatgattttataaggattaaa-caaaataccaaggaccaaaaccaaatattctatatttgcagggacta 4712253  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    | |||            ||||||| |||||||||||||||| | |||||||| |||||||||| |||||||||||    
T  4712252 ataccaaaaaaaaaaaattataggaactaaaaccaaaacgccaaatatttgcagggaccattttcatatttaagc 4712178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 9301779 - 9301952
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||    
T  9301779 atgaatattatacggaccaatatcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcatggacta 9301878  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||| |||||||| |||||||| ||||||||||  |||||||||||||||||||||    
T  9301879 aaaccaaaaaaatatttttatagagactaaaatcaaaacgccagatatttgc-tggaccatttccatatttaagc 9301952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 12792782 - 12792955
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12792782 atgaatattatagtgaccaatttcaatatgaaataattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 12792881  T
Q  115 aaa-ccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||              ||||||||||||||||||||| || ||||||||||  |||||||||||||||||||||    
T  12792882 aaataaaaaataaaaaattatagggactaaaaccaaaatgctagatatttgc-aggaccatttccatatttaagc 12792955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 17865149 - 17865045
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  17865149 atgaatattatagggaccattttcaatatgaaatgattttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcagggacta 17865050  T
Q  115 aaacc 119  Q
    |||||    
T  17865049 aaacc 17865045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 46481090 - 46480986
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  46481090 atgaatattatagggaccaatttcaatatgaaatgattttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtagggacta 46480991  T
Q  115 aaacc 119  Q
    |||||    
T  46480990 aaacc 46480986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 26314685 - 26314858
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| ||||||||||||||| |||||||||||||  ||||||||||||||||||||||| | |||||||||||||||| |||||||||||||    
T  26314685 atgaatattatatggaccaatttcaatatgaaatgattttacgtggattaaaacaaaataccaaggatctaaaccaaatattctatatttgcagggacta 26314784  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaag 187  Q
    |||||           |||||||||| |||||||||||||| ||||||||||  ||| ||||||||||||||||    
T  26314785 aaaccaaaaaaatatttttatagggattaaaaccaaaacgccagatatttgccaggaacatttccatatttaag 26314858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 46081584 - 46081757
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||    
T  46081584 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagaaacta 46081683  T
Q  115 aaaccnnnnnnnnnnttt-atagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaag 187  Q
    ||||           | | ||| ||| |||||||||||||  ||||||||||||| ||||||| ||||||||||    
T  46081684 aaacaaaaaatatattctcataaggattaaaaccaaaacgtcagatatttgcgggaaccattttcatatttaag 46081757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 188
Target Start/End: Original strand, 13493100 - 13493269
Alignment:
Q  21 attatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc- 119  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||     
T  13493100 attatagggaccaatttcaatatgaaatggttttacaaggattaaaacaaaataccatggatcaaaaccaaatattctatatttgcagggactaaaacca 13493199  T
Q  120 -nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
               ||| ||  ||||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  13493200 attttattttatttttatagactaaaaccaaaacgctaaatatttgcagggaccatttccatatttaagc 13493269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 39385371 - 39385546
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||| ||||||||||||| ||| |||||||||||||    
T  39385371 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaatataccaaagacaaaaaccaaatattttatatttgcagggacta 39385470  T
Q  115 aaac--cnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||             |||||||||| ||||| |||||||  |||||||||  ||||||||||||||||||||||    
T  39385471 aaacaaaataatatatttttatagggattaaaagcaaaacgtcagatatttgtagggaccatttccatatttaagc 39385546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 16491820 - 16491716
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||| ||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||    
T  16491820 atgaatatcatagggaccaatttcaatatgaaatgattttataaggattaaaataaaataccaaggaccaaaaccaaatattctatatttgcagggatta 16491721  T
Q  115 aaacc 119  Q
    |||||    
T  16491720 aaacc 16491716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 190
Target Start/End: Original strand, 32592953 - 32593125
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| | |||||| |||||| |||||||||||| ||||||||||||||||||||   ||||||||| ||||||||||| |||||||||||||    
T  32592953 atgaatattatatgaaccaatatcaatatgaaatgattttataaggattaaaacaaaatacc---gaccaaaactaaatattctatatttgcagggacta 32593049  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagcga 190  Q
    |||||          |||||| ||| ||||||||||| | ||||||||||| || |||||||||||||||||||||    
T  32593050 aaaccaaaaaattattttataaggattaaaaccaaaatgtaagatatttgctggaaccatttccatatttaagcga 32593125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 4712423 - 4712561
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaaccnnnnnnnnnntttatagggactaaaaccaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||          ||||||||||||||||||||    
T  4712423 attttacaaggattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaatatttttatagggactaaaaccaa 4712522  T
Q  150 aacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    || |  |||||||||| ||||| |||| |||||||||||    
T  4712523 aatgtcagatatttgcagggactattttcatatttaagc 4712561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 17865221 - 17865360
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-nnnnnnnnnntttatagggactaaaacca 148  Q
    ||||||||||||||||||||||||||||| |||||||||||||| || ||| ||||||||||||||||||           |||| ||||||||||||||    
T  17865221 attttacaaggattaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 17865320  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||||| ||||| |||| |||||||||||    
T  17865321 aaatgtcagatatttgcagggactattttcatatttaagc 17865360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 43750161 - 43750259
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||| | ||||||| | ||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||    
T  43750161 atattacaaggaccaaatccaatatgaaacaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 43750259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 20045975 - 20045874
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||| | |||||||||||| ||||| |||||| || ||||||||||||| ||||| ||||||||| ||||||| ||| |||||||| ||||    
T  20045975 atgaatattatagaggccaatttcaatatgaaataattttataaagattaaaacaaaacaccaaagaccaaaactaaatattatatatttgcaggaacta 20045876  T
Q  115 aa 116  Q
    ||    
T  20045875 aa 20045874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 37815586 - 37815726
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc--nnnnnnnnnntttatagggactaaaacc 147  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| || ||| ||||||||||||||||||            |||| |||||||||||||    
T  37815586 attttacaaggactaaaataaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaaatatttttacagggactaaaacc 37815685  T
Q  148 aaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||| |  |||||||||| ||||| |||| |||||||||||    
T  37815686 aaaatgtcagatatttgctgggacaattttcatatttaagc 37815726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 12792710 - 12792643
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| || ||| ||||||||||||||||    
T  12792710 attttacaaggattaaaacaaaatatcaaggaccaaaatcaaattttttatatttgcagggactaaaa 12792643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 13493022 - 13492883
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-nnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||||||| |||||||||||||||| |||||||||||| | || | | ||||||||||||||||||           |||| ||||||||||||||    
T  13493022 attttacaaggaataaaacaaaataccaaagaccaaaaccaatttttttttatttgcagggactaaaaccaaaaaaatatttttagagggactaaaacca 13492923  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||||| ||||| |||| |||||||||||    
T  13492922 aaaagtcagatatttgcagggactattttcatatttaagc 13492883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 22487465 - 22487534
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||  || |||||| |||||||||||    
T  22487465 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttcatatttgcaaggactaaaacc 22487534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 32592881 - 32592812
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||||||||||| |||||||||||||||||  || ||| ||||||||||||||||||    
T  32592881 attttacaaggactaaaacaaaatatcaaggaccaaaaccaaaatttttatatttgcagggactaaaacc 32592812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 16959902 - 16959762
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc--nnnnnnnnnntttatagggactaaaacc 147  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| || ||| |||||| |||||||||||            |||||||||||||||||     
T  16959902 attttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttatatttgcatggactaaaaccaaaaaaaatatttttatagggactaaaact 16959803  T
Q  148 aaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||| |  |||||||||| ||||| |||| |||||||||||    
T  16959802 aaaatgtcagatatttgcagggactattttcatatttaagc 16959762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 13683218 - 13683292
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaat 93  Q
    |||||||| ||||||| | ||||| |||   |||||||||||| |||||||||||||||||||||||||||||||    
T  13683218 atattataaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaat 13683292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 17865004 - 17864946
Alignment:
Q  130 tttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||| |||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  17865004 tttatatggactaaaaccaaaacgccagatatttgcaaggaccatttccatatttaagc 17864946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 2184532 - 2184464
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||  || |||||| |||||||||||    
T  2184532 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttaatatttgca-ggactaaaacc 2184464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 9301729 - 9301641
Alignment:
Q  29 gaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||| | ||||| ||| | |||||||||||| |||||||||||  |||||||||||||||||| || ||| |||| |||||||||||    
T  9301729 gaccaaatccaatatgaattaattttacaaggactaaaacaaaatttcaaggaccaaaaccaaattttttatgtttgaagggactaaaa 9301641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 17107681 - 17107744
Alignment:
Q  54 tacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||| ||||||||||||||||||||||||| ||| | || ||| ||||||||||||||||    
T  17107681 tacaaggactaaaacaaaataccaaggaccaaaatcaatttttttatatttgcagggactaaaa 17107744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 26314611 - 26314545
Alignment:
Q  52 tttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||| ||||||||||||||||||||||||| | ||| || ||| ||||||||||||||||||    
T  26314611 tttacaaggactaaaacaaaataccaaggaccaaaaac-aattttttatatttgcagggactaaaacc 26314545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 46480999 - 46480945
Alignment:
Q  134 tagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||||||||||||||||||| ||||||||||  ||||||||| |||||||||||    
T  46480999 tagggactaaaaccaaaacgccagatatttgcaaggaccattttcatatttaagc 46480945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 16491892 - 16491933
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaa 91  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  16491892 attttacaaggactaaaacaaaataccaaggaccaaaaccaa 16491933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 46481162 - 46481219
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgca 107  Q
    |||||||||||| |||||||||||||||||||||| |||||||| || ||| ||||||    
T  46481162 attttacaaggactaaaacaaaataccaaggaccataaccaaattttttatatttgca 46481219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 20046047 - 20046114
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||| | |||||||||||| |||||||||||||||||| || ||| ||  ||||||||||||    
T  20046047 attttacaagaactaaaacaaaatagcaaggaccaaaaccaaattttttatattgacagggactaaaa 20046114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 6100550 - 6100619
Alignment:
Q  49 gattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    ||||||| || || |||||||||||||||||||||||||  |||| |||||| ||||||  |||||||||    
T  6100550 gattttataaagactaaaacaaaataccaaggaccaaaatgaaattttctatatttgcaaagactaaaac 6100619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 11021918 - 11021987
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    ||||||||| || |||||||||||||| |||||||||| ||||| || ||| |||| | |||||||||||    
T  11021918 attttacaaagactaaaacaaaataccgaggaccaaaatcaaattttttatatttgtaaggactaaaacc 11021987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 5721197 - 5721265
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggacc-aaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| |||||||||||||||| |||| |||||||||| || ||| |||||  |||||||||    
T  5721197 attttacaaggactaaaacaaaataccaatgaccaaaaaccaaattttttatatttgcttggactaaaa 5721265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 4e-65; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 15 - 189
Target Start/End: Complemental strand, 8926360 - 8926185
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8926360 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 8926261  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagcg 189  Q
    |||||           |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  8926260 aaaccaaaaaaatatttttatagggactaaaaccaaaacgtaagatatttgcggagaccatttccatatttaagcg 8926185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 15 - 189
Target Start/End: Complemental strand, 8936617 - 8936442
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8936617 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 8936518  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagcg 189  Q
    |||||           |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  8936517 aaaccaaaaaaatatttttatagggactaaaaccaaaacgtaagatatttgcggagaccatttccatatttaagcg 8936442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 5924000 - 5923825
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5924000 atgaatattctagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 5923901  T
Q  115 aaacc--nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||            |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5923900 aaaccaaaaaaaatatttttatagggactaaaaccaaaacgcaagatatttgcagggaccatttccatatttaagc 5923825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 19661559 - 19661733
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19661559 atgaatattatagggaccaatttcaacatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 19661658  T
Q  115 aaa-ccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |           ||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  19661659 aaatcaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcaaggaccatttccatatttaagc 19661733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 3345229 - 3345403
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| |||| ||||    
T  3345229 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatgttctatatttacaggaacta 3345328  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  3345329 aaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaagc 3345403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 30609076 - 30609250
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||    
T  30609076 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcatggacta 30609175  T
Q  115 aaa-ccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| ||          ||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||||    
T  30609176 aaacccaaaaaatatttttatagggactaaaaccaaaacaccagatatttgcagggaccattttcatatttaagc 30609250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 186
Target Start/End: Original strand, 33783609 - 33783780
Alignment:
Q  17 gaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaa 116  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33783609 gaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaa 33783708  T
Q  117 accnnnnnnnnnntttata--gggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaa 186  Q
    |||          ||| ||  |||||||||||| |||||| |||||||||| |||| |||||||||||||||    
T  33783709 accaaaaaaaatatttttagggggactaaaaccgaaacgccagatatttgcagggatcatttccatatttaa 33783780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 31717348 - 31717174
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  31717348 atgaatattatatggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggacta 31717249  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||||| |||||||||||||  | |||||||| ||||||||||||||||||||||    
T  31717248 aaaccaaaaaaatatttttatagggattaaaaccaaaacgtcaaatatttgcagggaccatttccatatttaagc 31717174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 29819559 - 29819455
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29819559 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 29819460  T
Q  115 aaacc 119  Q
    |||||    
T  29819459 aaacc 29819455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 3484957 - 3484853
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3484957 atgaatattatagggaccaatttcaatatgaaatgattttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 3484858  T
Q  115 aaacc 119  Q
    |||||    
T  3484857 aaacc 3484853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 28853658 - 28853483
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  28853658 atgaatattatatggaccaatttcaatatgaaatgattttagaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggacta 28853559  T
Q  115 aaacc--nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||            |||| |||||||||||||||||||| | |||||||  | ||||||||||||||||||||    
T  28853558 aaaccaaaaaaaatatttttacagggactaaaaccaaaacgccaaatatttgtagtgaccatttccatatttaagc 28853483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 17238207 - 17238111
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcaggga 111  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  17238207 atgaatattattgggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtaggga 17238111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 16525366 - 16525197
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||| |||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||| ||| |||||||||||||    
T  16525366 atgagtattatagagatcaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagataaaaaccaaatattttatatttgcagggacta 16525267  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaa 186  Q
    |||||           ||||||||| ||||| |||||||  |||||||||| ||||| ||||||||||||||    
T  16525266 aaaccaaaaaaaaa--ttatagggattaaaagcaaaacgtcagatatttgcagggactatttccatatttaa 16525197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 5404743 - 5404666
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaa 92  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5404743 atgaatattatagggactaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaa 5404666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 17238248 - 17238348
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||| | ||||||| ||||||| |||   |||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  17238248 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgcagggactaaaac 17238347  T
Q  119 c 119  Q
    |    
T  17238348 c 17238348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 30609004 - 30608935
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  30609004 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc 30608935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 188
Target Start/End: Complemental strand, 19661518 - 19661349
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||| | ||||||| ||||||| |||   ||||||||| || ||||||||||||||||||||||||| ||||| || ||| |||||||||||||||||    
T  19661518 atattacaaggaccaaattcaatatgaatcaattttacaaagactaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaac 19661419  T
Q  119 cnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |          |||| ||  ||||||||||||| |  |||||||||| ||||| |||| |||||||||||    
T  19661418 caaaaaatatttttacagaaactaaaaccaaaatgtcagatatttgcagggactattttcatatttaagc 19661349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 31717420 - 31717489
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |  ||| ||||||||||||||||||    
T  31717420 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttgttatatttgcagggactaaaacc 31717489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 3345158 - 3345090
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||||| | ||||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
T  3345158 attttacaagaagtaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 3345090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 16525438 - 16525506
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||||||||||||||||||||| ||||||||||||||||| || ||| ||| |||||||||||||    
T  16525438 attttacaaggattaaaacaaaatacgaaggaccaaaaccaaattttttatatttacagggactaaaac 16525506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 3485019 - 3485086
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| |||||||||||||||| |||||||||||||| || ||| ||||||||||||||||    
T  3485019 attttacaaggactaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaa 3485086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 5404815 - 5404954
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa-ccnnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||||||| ||||||||||||| || |||||||||||||| || ||| |||||||||||||||| |           ||||||| |||||||||||    
T  5404815 attttacaaggactaaaacaaaatactaatgaccaaaaccaaattttttatatttgcagggactaaaatcaaaaaaatatttttatagagactaaaacca 5404914  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||||| ||||| |||| |||||||||||    
T  5404915 aaatgtcagatatttgcagggactattttcatatttaagc 5404954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 26272225 - 26272364
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-nnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||||||| |||||||| |||||||||||||||| ||||| || ||| |||||||| |||||||||           |||||||||||||||||||    
T  26272225 attttacaaggactaaaacaatataccaaggaccaaaatcaaattttttatatttgcaggaactaaaaccaaaaatatatttttatagggactaaaacca 26272324  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||| | ||||| |||| |||||||||||    
T  26272325 aaatgtcagatatttacagggactattttcatatttaagc 26272364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 28853730 - 28853799
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||||||||||| |||||||||||||||||| || ||| |||||||| |||||||||    
T  28853730 attttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaggaactaaaacc 28853799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 29819467 - 29819414
Alignment:
Q  135 agggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  29819467 agggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaagc 29819414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 5924072 - 5924140
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| || ||| |||| ||||||||||||    
T  5924072 attttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttgtagggactaaaac 5924140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 5404657 - 5404601
Alignment:
Q  130 tttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaa 186  Q
    |||||||||||||||| ||||| || |||||||||| ||||||||||||||||||||    
T  5404657 tttatagggactaaaatcaaaatgccagatatttgcagggaccatttccatatttaa 5404601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 8926432 - 8926503
Alignment:
Q  50 attttacaaggattaaaacaaaata--ccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||  | ||||||||||||||||| || ||| ||||||||||||||||||    
T  8926432 attttacaaggactaaaacaaaatatacaaaggaccaaaaccaaattttttatatttgcagggactaaaacc 8926503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 8936689 - 8936760
Alignment:
Q  50 attttacaaggattaaaacaaaata--ccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||  | ||||||||||||||||| || ||| ||||||||||||||||||    
T  8936689 attttacaaggactaaaacaaaatatacaaaggaccaaaaccaaattttttatatttgcagggactaaaacc 8936760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 29819631 - 29819698
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| |||||||||||||||| |||||||||||||| || ||| |||||  |||||||||    
T  29819631 attttacaaggactaaaacaaaataccaatgaccaaaaccaaattttttatatttgcttggactaaaa 29819698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 33783557 - 33783467
Alignment:
Q  28 ggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    ||||||| ||||||| |||   ||||||||||||  ||||||||||| |||| ||||||||||||| || ||| |||||| ||||||||||    
T  33783557 ggaccaaattcaatatgaatcaattttacaaggacaaaaacaaaatatcaagaaccaaaaccaaattttttatatttgcaaggactaaaac 33783467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 5140743 - 5140690
Alignment:
Q  134 tagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaag 187  Q
    |||||||||||||||||| |  |||||||||| |||||||||||||||||||||    
T  5140743 tagggactaaaaccaaaatgtcagatatttgcagggaccatttccatatttaag 5140690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 9571641 - 9571710
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||| ||||| ||||| ||||| ||  || ||||||||||||||||||    
T  9571641 attttacaaggactaaaacaaaatacgaaggatcaaaatcaaatttttcatatttgcagggactaaaacc 9571710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 3484832 - 3484782
Alignment:
Q  138 gactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||||||||||| |  |||||||||| |||| |||||||||||||||||    
T  3484832 gactaaaaccaaaatgttagatatttgcagggatcatttccatatttaagc 3484782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 5409221 - 5409279
Alignment:
Q  130 tttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||||| |||||||||||||| |  |||||||||| ||||| |||| |||||||||||    
T  5409221 tttatagagactaaaaccaaaatgtcagatatttgcagggactattttcatatttaagc 5409279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 17238084 - 17238031
Alignment:
Q  135 agggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||||||||||||||    |||||||||| |||| |||||||||||||||||    
T  17238084 agggactaaaaccaaaatatcagatatttgcagggatcatttccatatttaagc 17238031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 3e-62; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 14379323 - 14379497
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  14379323 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggacaaaaaccaaatattctatttttgcaaggacta 14379422  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14379423 aaaccaaaaaaatatttttatagggactaaaaccaaaacgcaagatatttgcagggaccatttccatatttaagc 14379497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 19204765 - 19204591
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19204765 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 19204666  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||| ||||||||| |||||||| | |||||||| ||||||||||||||||||||||    
T  19204665 aaaccaaaaaaatatttttataaggactaaaatcaaaacgctaaatatttgcagggaccatttccatatttaagc 19204591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 18369223 - 18369396
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||    
T  18369223 atgaatattatagggaccaatctcaatatgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggacta 18369322  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||          ||||||||||||||||||||||||| |||||||||| || | |||||||||||||||||    
T  18369323 aaaccaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcaggtatcatttccatatttaagc 18369396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 38873645 - 38873473
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  38873645 atgaatattatagggaccaatttcaatatgaaatgattttacaagaattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaaggacta 38873546  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||          ||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||||    
T  38873545 aaacc-aaatttttttttatagggactaaaaccaaaacgttagatatttggagggaccatttccatatttaagc 38873473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 13572644 - 13572471
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| | ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  13572644 atgaatattataagaaccaatttcaacatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaacattctatatttgcagggacta 13572545  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||           ||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  13572544 aaacaaaaaaatatttttatagggactaaaactaaaacgccagatatttgcagggaccatttccatatttaagc 13572471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 187
Target Start/End: Complemental strand, 3371475 - 3371302
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||    
T  3371475 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcaggaacta 3371376  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaag 187  Q
    |||||           |||| |||||||||||||||||||| |||||||| |  ||||||||||||||||||||    
T  3371375 aaaccaaaaaaatatttttacagggactaaaaccaaaacgccagatatttacctggaccatttccatatttaag 3371302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 7877537 - 7877707
Alignment:
Q  18 aatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    ||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7877537 aatattatagggttcaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 7877636  T
Q  118 cc--nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaa 186  Q
    ||            ||||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||    
T  7877637 ccaaaaaaaatatttttatagggactagaaccaaaacgccagatatttgcagggaccattttcatatttaa 7877707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 28921366 - 28921193
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||  ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  28921366 atgaatattataaagaccagtttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggacta 28921267  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||          |||||||||||||| ||||||||   |||||||||| ||||||||||||||| ||||||    
T  28921266 aaaccaaaaaatatttttatagggactaataccaaaacatcagatatttgcagggaccatttccatagttaagc 28921193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 12806722 - 12806547
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  12806722 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 12806623  T
Q  115 aaac--cnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||             ||||||||||||||| ||||||||| | |||||| |  |||||||||||||||||||||    
T  12806622 aaacaaaaaaatatatttttatagggactaaatccaaaacgccaaatatttacaaggaccatttccatatttaagc 12806547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 190
Target Start/End: Original strand, 41594161 - 41594337
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| |||||||||||||    
T  41594161 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattttatatttgcagggacta 41594260  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagcga 190  Q
    |||||           |||| ||||||||||||||||| |  |||||||||| ||||||||||||||||||||||||    
T  41594261 aaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggaccatttccatatttaagcga 41594337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 2395330 - 2395156
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||| || ||||||||||| |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||||||||    
T  2395330 atgaatattatagagatcaatttcaatatgaaatgattttacaaggactaaaataaaataccaaggactaaaaccaaatattctatatttgcagggacta 2395231  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||||||||||| |||||||| |||||||||| | ||||||||||||||||||||    
T  2395230 aaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagtgaccatttccatatttaagc 2395156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 29683347 - 29683175
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||| |||    
T  29683347 atgaatattataggg-ccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagggcc-aaaccaaatattctatatttgcaggggcta 29683250  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  29683249 aaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccattttcatatttaagc 29683175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 6880183 - 6880358
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  6880183 atgaatattatggggaccaatttcaatacgaaatgattttacaatgattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagacta 6880282  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagcg 189  Q
    |||||           |||||| |||||||| ||||||||| ||||||||   ||||| |||||||||||||||||    
T  6880283 aaaccaaaaaaatatttttataaggactaaatccaaaacgccagatatttatagggactatttccatatttaagcg 6880358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 17457928 - 17458102
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||| || ||    
T  17457928 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattttatatttgcagagatta 17458027  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||||||||||||| ||||| | |||||||||| || ||||||| |||||||||||    
T  17458028 aaaccaaaaaaatatttttatagggactaaaacgaaaacactagatatttgcaggaaccattttcatatttaagc 17458102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 30432805 - 30432979
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| |||||||||||||    
T  30432805 atgaatattataagcaccaatttcaatatgaaatgattttacaaggattaaaacaaaataacaaagaccaaaaccaaaaattctatatttgcagggacta 30432904  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||| ||||||||||||||||| |  |||||||||| ||||||||||||||||||||||    
T  30432905 aaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgccgggaccatttccatatttaagc 30432979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 30771241 - 30771149
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgca 107  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30771241 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgca 30771149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 4171698 - 4171597
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||    
T  4171698 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaaccaaatgttctatatttgcagggacta 4171599  T
Q  115 aa 116  Q
    ||    
T  4171598 aa 4171597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 6164108 - 6164282
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||    
T  6164108 atgaatattataaggactaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgctgggacta 6164207  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||||| ||||| |||||||| ||||||| || ||| |||| |||||||||||||    
T  6164208 aaaccaaaaaaatatttttatagggattaaaatcaaaacgccagatattagcaggggccatatccatatttaagc 6164282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 33940887 - 33940991
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||    
T  33940887 atgaatattatagggaccaatttcaatatgaaatgattttataaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggacta 33940986  T
Q  115 aaacc 119  Q
    |||||    
T  33940987 aaacc 33940991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 10748704 - 10748875
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | |||||||    
T  10748704 atgaatattatagagaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaatgaccaaaaccaaatattctatatttactgggacta 10748803  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||          |||||| ||||||||| |||||||| | |||||||  || | |||||||||||||||||    
T  10748804 aaacc--aatttttttttataaggactaaaatcaaaacgccaaatatttgtaggaatcatttccatatttaagc 10748875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 37609166 - 37609339
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaa-caaaataccaaggaccaaaaccaaatattctatttttgcagggact 113  Q
    |||||||||||||| ||||||||||||| ||||| |||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||||    
T  37609166 atgaatattatagg-accaatttcaatatgaaat-attttacaaggattaaaaactaaaaaccaaggaccaaaaccaaatattctatatttgcagggact 37609263  T
Q  114 aaaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||||           |||| |||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  37609264 aaaaccaaaaaaatatttttagagggactaaaaccaaaacgccagatatttgcaaggaccatttccatatttaagc 37609339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 3948574 - 3948747
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||    
T  3948574 atgaatattataatgaccaatttcaatatgaaatgattttacaaggattaaaacaaaatataaaggaccaaaaccaaatattctatatttgcagggacta 3948673  T
Q  115 aaaccnnnnnnnnnnttta--tagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaa 186  Q
    |||||          |||   ||||||||||||| ||||||  ||||||||  | |||||||||||||||||||    
T  3948674 aaaccaaaaaaatatttttattagggactaaaactaaaacgtcagatatttatgaggaccatttccatatttaa 3948747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 29 - 188
Target Start/End: Original strand, 25318518 - 25318678
Alignment:
Q  29 gaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa-ccnnnnnnnn 127  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||| || |||||||| |             
T  25318518 gaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaagaccaaaatcaaatattctatatttgtagagactaaaatcaaaaaaata 25318617  T
Q  128 nntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
      |||| |||||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  25318618 tttttagagggactaaaaccaaaacgccagatatttgcaaggaccatttccatatttaagc 25318678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 32521648 - 32521473
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||| || ||||||    
T  32521648 atgaatattataaggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaagaccaaaaccaaatattttatatttacaaggacta 32521549  T
Q  115 aaaccnnnnnnnnnntttatag--ggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||          ||| |||  |||||||||||||||||  | |||||| | || |||||||||||||||||||    
T  32521548 aaaccaaaaaaaatatttttagaaggactaaaaccaaaacgtcatatatttaccggaaccatttccatatttaagc 32521473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 42705125 - 42705053
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaa 87  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  42705125 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatacgaaggaccaaaa 42705053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 29683419 - 29683559
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-nnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||           |||| ||||||||||| ||    
T  29683419 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaatca 29683518  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagcg 189  Q
    ||| |  |||||||||| ||||| |||||||||||||||||    
T  29683519 aaatgtcagatatttgcagggactatttccatatttaagcg 29683559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 7877462 - 7877393
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  7877462 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc 7877393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 18369151 - 18369012
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa-ccnnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||||||| |||||||||||||||| |||||||||||||| || ||| |||||||||||||||| ||          |||| ||||||||||||||    
T  18369151 attttacaaggactaaaacaaaataccaaagaccaaaaccaaattttttatatttgcagggactaaaacccaaaaaatatttttacagggactaaaacca 18369052  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||||| ||||| |||| |||||||||||    
T  18369051 aaatgtcagatatttgcagggactattttcatatttaagc 18369012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 4171739 - 4171839
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||| | ||||||| | ||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||| || ||| ||||| |||||||||||    
T  4171739 atattacaaggaccaaatccaatatgaattaattttacaaggattaaaacaaattaccaaggaccaaaaccaaattttttatatttgctgggactaaaac 4171838  T
Q  119 c 119  Q
    |    
T  4171839 c 4171839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 19204838 - 19204904
Alignment:
Q  51 ttttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||    
T  19204838 ttttacaagtattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 19204904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 3948502 - 3948433
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||||| ||||||||| || ||| ||||||||||||||||||    
T  3948502 attttacaaggactaaaacaaaataccaaggaccgaaaccaaattttttatatttgcagggactaaaacc 3948433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 12806794 - 12806933
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaaccnnnnnnnnnnttt-atagggactaaaacca 148  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||| ||||||||||          ||| |  |||||||||||||    
T  12806794 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaaccaaaaaaatatttttacggggactaaaacca 12806893  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||||| ||||| |||| |||||||||||    
T  12806894 aaatgttagatatttgcagggacaattttcatatttaagc 12806933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 28921438 - 28921507
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||||||||||| |||||||||||||||||| || ||| ||||||||||||||||||    
T  28921438 attttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaacc 28921507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 3371547 - 3371615
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| || ||| |||||||||||||||||    
T  3371547 attttacaaggactaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagggactaaaac 3371615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 6880142 - 6880042
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||| ||||||| | ||||| |||   |||||||| ||| ||||||||||||||||||||||||| ||||| || ||| |||||||||||||||||    
T  6880142 atattataaggaccaaatccaatatgaataaattttacatggactaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaac 6880043  T
Q  119 c 119  Q
    |    
T  6880042 c 6880042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 10748632 - 10748563
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||| ||||||||||||||||||||| || ||| |||||||||| |||||||    
T  10748632 attttacaaggactaaaacaaagtaccaaggaccaaaaccaaattttttatatttgcagggattaaaacc 10748563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 41594089 - 41594020
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    ||||||||| || |||||||||||| |||||||||||||||||| |||||| |||||||| |||||||||    
T  41594089 attttacaaagactaaaacaaaatatcaaggaccaaaaccaaattttctatatttgcaggaactaaaacc 41594020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 42705197 - 42705266
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    ||||||||||||||||||||||||||||||| |||||||||||| || ||| ||||||  ||||||||||    
T  42705197 attttacaaggattaaaacaaaataccaaggtccaaaaccaaattttttatatttgcactgactaaaacc 42705266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 30432733 - 30432667
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || | ||||| ||||||||||||    
T  30432733 attttacaaggactaaaacaaaataccaaggaccaaaaccaaat-ttttgtttttacagggactaaaa 30432667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 17457887 - 17457789
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||| | ||||||| | ||||| ||| | |||||||||||| |||||||||||| |||||||||||||| ||| || ||| |||||||| |||||||    
T  17457887 atattacaaggaccaaatccaatatgaattaattttacaaggactaaaacaaaatatcaaggaccaaaacctaattttttatatttgcaggaactaaaa 17457789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 37609094 - 37609028
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaa 116  Q
    ||||||||||||  |||||||||||||||||||||||||||||| || ||| |||||| ||||||||    
T  37609094 attttacaaggacaaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaaggactaaa 37609028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 14379251 - 14379182
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| || ||  ||||||||||||||||||    
T  14379251 attttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttacatttgcagggactaaaacc 14379182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 33940819 - 33940680
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac-cnnnnnnnnnntttatagggactaaaacca 148  Q
    ||||||||||||  ||||||||||| |||||||||||||||||| || ||| |||||||| ||||||||            |||| ||||||||||| ||    
T  33940819 attttacaaggacaaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaggaactaaaactaaaaaaatatttttacagggactaaaatca 33940720  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| | ||||||||||| ||||| |||| |||||||||||    
T  33940719 aaatgtaagatatttgcagggactattttcatatttaagc 33940680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 32521720 - 32521788
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    ||||||||||||  ||||||||||| |||||||||||||||||| || ||| |||||||||| ||||||    
T  32521720 attttacaaggacaaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggattaaaac 32521788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 6164036 - 6163969
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| |||||||||||||||||||||||||| |||| || ||| ||||||| ||| ||||    
T  6164036 attttacaaggactaaaacaaaataccaaggaccaaaactaaattttttatatttgcagagacaaaaa 6163969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 2395402 - 2395541
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac-cnnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||||||| | |||||||||| |||||||||||| ||||| || ||| |||||||||| ||||||            |||| ||||||||||||||    
T  2395402 attttacaaggacttaaacaaaatatcaaggaccaaaatcaaattttttatatttgcagggattaaaacaaaaaaaatatttttacagggactaaaacca 2395501  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||||| ||||| |||| |||||||||||    
T  2395502 aaatgtcagatatttgcagggactattttcatatttaagc 2395541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 42705044 - 42704988
Alignment:
Q  131 ttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||||| |||||| |||||||| |||||||||| |||||||||| |||||||||||    
T  42705044 ttataggg-ctaaaagcaaaacgccagatatttgcagggaccattttcatatttaagc 42704988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 13278110 - 13278063
Alignment:
Q  142 aaaaccaaaacgcaagatatttgc-ggggaccatttccatatttaagc 188  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||||    
T  13278110 aaaaccaaaacgtcagatatttgcaggggaccatttccatatttaagc 13278063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 13572716 - 13572785
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||||||| |||| |||  |||||| ||||| || ||| ||||| ||||||||||||    
T  13572716 attttacaaggactaaaacaatatacaaagtgccaaaatcaaattttttatatttgctgggactaaaacc 13572785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 25318485 - 25318413
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaa 91  Q
    |||||| | ||||||| ||||||| |||   |||||| |||||  ||||||||||| ||||||||||||||||    
T  25318485 atattacaaggaccaaattcaatatgaatcaattttataaggacaaaaacaaaatatcaaggaccaaaaccaa 25318413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 3e-62; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 20062008 - 20062182
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20062008 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 20062107  T
Q  115 aaa-ccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| ||          ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  20062108 aaacccaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaagc 20062182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 33619106 - 33619280
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  33619106 atgaatattatagggaccaatctcaataagaaatgattttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgtagggacta 33619205  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||| |||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  33619206 aaaccaaaaaaatatttttataggaactaaaaccaaaacaccagatatttgcagggaccatttccatatttaagc 33619280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 50624939 - 50624765
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  50624939 atgaatattacagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 50624840  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           | |||| ||||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  50624839 aaaccaaaaaaatatatatataaggactaaaaccaatacgccagatatttgcagggaccatttccatatttaagc 50624765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 14602183 - 14602009
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  14602183 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 14602084  T
Q  115 aaac-cnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||            |||||| ||||||||||||||  || |||||||||| ||||||||||||||||||||||    
T  14602083 aaactaaaaaaatatttttatatggactaaaaccaaagtgccagatatttgcagggaccatttccatatttaagc 14602009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 28031820 - 28031646
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||    
T  28031820 atgaatattataaggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattatatatttgcagggacta 28031721  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||| |||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  28031720 aaaccaaaaaaataattttataaggactaaaactaaaacgccagatatttgcagggaccatttccatatttaagc 28031646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 26244722 - 26244548
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||    
T  26244722 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaactaaataccaaggaccaaaatcaaatattctatatttgcagggacta 26244623  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    || ||           |||| ||||||||||||||||| |  |||||||||| ||||||||||||||||||||||    
T  26244622 aatccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggaccatttccatatttaagc 26244548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 50096306 - 50096132
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  50096306 atgaatattatagggaccaatttcaatataaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 50096207  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||| ||||||||||||||||| |  |||||||||| ||||| ||||||||||||||||    
T  50096206 aaaccaaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggacaatttccatatttaagc 50096132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 18963777 - 18963608
Alignment:
Q  20 tattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||| |||||||||||    
T  18963777 tattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataacaatgaccaaaaccaaatattctatatttgcaaggactaaaacc 18963678  T
Q  120 -nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
               |||||||||||||||||||||||||  ||||||||| ||||||||||||| ||||||||    
T  18963677 aaaaaaatatttttatagggactaaaaccaaaacgccggatatttgcagggaccatttccacatttaagc 18963608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 47829135 - 47828962
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  47829135 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaagaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 47829036  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||           ||||||||||||||| |||||| ||   |||||| | |||| |||||||||||||||||    
T  47829035 aaacaaaaaaatatttttatagggactaaatccaaaatgccgtatatttacagggatcatttccatatttaagc 47828962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 10913947 - 10913774
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||    
T  10913947 atgaatattatagggaccaatctcaatatgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggacta 10913848  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||||| |||||||||||| ||| ||||||||  |||||||||||||||||||||    
T  10913847 aaaccaaaaaaatatctttatagggattaaaaccaaaacccaa-atatttgcatggaccatttccatatttaagc 10913774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 33730 - 33556
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  33730 atgaatattatagggaccattttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattttatatttgcagagacta 33631  T
Q  115 aaac-cnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||            ||||||||||||||||||||||||  |||||||||| |||| ||| | |||||||||||    
T  33630 aaactagaaaaatatttttatagggactaaaaccaaaacgtcagatatttgcagggatcatgttcatatttaagc 33556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 37172458 - 37172632
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||||| | |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| || ||||||||||    
T  37172458 atgaatattatagggaccaatattaatatgaaatgattttacaatgattaaaacaaaataccaaagaccaaaaccaaatattctatattcgcagggacta 37172557  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||||||||||| |||||||| |||||||| | |||||||| |||||||||||||    
T  37172558 aaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttaccgggaccatgtccatatttaagc 37172632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 42154923 - 42154819
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  42154923 atgaatattatagggaccagtttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcagggacta 42154824  T
Q  115 aaacc 119  Q
    |||||    
T  42154823 aaacc 42154819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 43191866 - 43191970
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  43191866 atgaatattatagggaccaatttcaatatgaaatgattttacaaggatcaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaggaacta 43191965  T
Q  115 aaacc 119  Q
    |||||    
T  43191966 aaacc 43191970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 12322265 - 12322091
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| ||||||||    
T  12322265 atgaatattatagagaccaatttcaatatgaaatgattttacaaggattaaaacaatatacctaggaccaaaaccaaatattctatatttgtagggacta 12322166  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    | |||           ||||||||||||||||||||||||  |||||||| | | |||||||| |||||||||||    
T  12322165 ataccaaaaaaatatttttatagggactaaaaccaaaacgtcagatatttacagagaccattttcatatttaagc 12322091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 39288364 - 39288467
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| | ||||||    
T  39288364 atgaatattatagggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaggaccaaaaccaaatattctttatttgaatggacta 39288463  T
Q  115 aaac 118  Q
    ||||    
T  39288464 aaac 39288467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 50096347 - 50096447
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||| | ||||||| ||||||| |||   |||||||||||| ||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||    
T  50096347 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgtagggactaaaac 50096446  T
Q  119 c 119  Q
    |    
T  50096447 c 50096447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 50625011 - 50625148
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaaccnnnnnnnnnntttatagggactaaaaccaa 149  Q
    |||||||| ||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||          |||| |||||||||||||||    
T  50625011 attttacagggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc-aaatttttttttacagggactaaaaccaa 50625109  T
Q  150 aacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    || |  |||||||||| ||||| |||| |||||||||||    
T  50625110 aatgtcagatatttgcagggactattttcatatttaagc 50625148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 20061936 - 20061797
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-nnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| || ||| ||||||||||||||||||           |||| ||||||||||||||    
T  20061936 attttacaaggagtaaaacaaaataccaaggaccaaaatcaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 20061837  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||||| ||||| |||| |||||||||||    
T  20061836 aaatgtcagatatttgcagggactattttcatatttaagc 20061797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 28031892 - 28032031
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac-cnnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||||||| ||||||||||||||||||||||||||||||  || ||| |||||||||||||||||            |||| ||||||||||||||    
T  28031892 attttacaaggactaaaacaaaataccaaggaccaaaaccaaaatttttatatttgcagggactaaaactaaaaaaatatttttacagggactaaaacca 28031991  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||||| ||||| |||| |||||||||||    
T  28031992 aaatgtcagatatttgcagggactattttcatatttaagc 28032031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 43191794 - 43191725
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||||||||||||| | || ||| ||||||||||||||||||    
T  43191794 attttacaaggactaaaacaaaataccaaggaccaaaaccaatttttttatatttgcagggactaaaacc 43191725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 10913988 - 10914088
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||| | ||||||||| ||||| |||   |||||||||||| | ||||||||||||||||||||||||||||| |  ||| |||||||||||||||||    
T  10913988 atattacaaggaccaattccaatatgaatcaattttacaaggactgaaacaaaataccaaggaccaaaaccaaatttgttatatttgcagggactaaaac 10914087  T
Q  119 c 119  Q
    |    
T  10914088 c 10914088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 26244794 - 26244861
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    ||||||||| || ||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  26244794 attttacaatgactaaaacaaaataccaaggatcaaaaccaaattttctatatttgcagggactaaaa 26244861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 47829176 - 47829275
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||| | ||||||| ||||||| |||   |||||||||||| |||||||||||| |||||||||||||||| | || ||| |||||||||||||||||    
T  47829176 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaatatcaaggaccaaaaccaatttttttatatttgcagggactaaaac 47829275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 42154995 - 42155064
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||| ||||| |||||||||||| |||||||||||||||||| || ||| ||||||||||||||||||    
T  42154995 attttataaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaacc 42155064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 14602255 - 14602392
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaaccnnnnnnnnnntttatagggactaaaaccaa 149  Q
    |||||||||||| |||||||||||| |||||||||||||||| | || ||| |||||||||||||||||           || ||||||| |||||||||    
T  14602255 attttacaaggactaaaacaaaataacaaggaccaaaaccaatttttttatatttgcagggactaaaactaaaaaaaaaatt-atagggattaaaaccaa 14602353  T
Q  150 aacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    || |  |||||||||| ||||| |||| |||||||||||    
T  14602354 aatgtcagatatttgcagggactattttcatatttaagc 14602392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 37172386 - 37172319
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| || ||| |||| |||||||||||    
T  37172386 attttacaaggattaaaacaaaataccaaggatcaaaatcaaattttttatatttgaagggactaaaa 37172319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 188
Target Start/End: Complemental strand, 50617042 - 50616938
Alignment:
Q  85 aaaccaaatattctatttttgcagggactaaaaccnnnnnnnnnntt-tatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatt 183  Q
    |||||||||||||||| ||||||||||||||||||           | |||| ||||||||||||| |||| |||||||||| |||||||||||||||||    
T  50617042 aaaccaaatattctatatttgcagggactaaaaccaaaaaaatatatatataaggactaaaaccaatacgccagatatttgcagggaccatttccatatt 50616943  T
Q  184 taagc 188  Q
    |||||    
T  50616942 taagc 50616938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 39027607 - 39027550
Alignment:
Q  62 ttaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||||    
T  39027607 ttaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagggactaaaacc 39027550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 39288292 - 39288224
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaacc-aaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| ||||||||||||||||||||||||||| |||| || ||| ||||||| ||||||||    
T  39288292 attttacaaggactaaaacaaaataccaaggaccaaaaccaaaattttttatatttgcagtgactaaaa 39288224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 12322337 - 12322404
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| |||||||||||| |||||||||||||||||| || |   ||||||||||||||||    
T  12322337 attttacaaggactaaaacaaaatatcaaggaccaaaaccaaatttttttaatttgcagggactaaaa 12322404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 201
Target Start/End: Original strand, 39027606 - 39027742
Alignment:
Q  66 aacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa-ccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttg 164  Q
    ||||||||||||||||| ||||||||||||||||| ||||||  |||||||| |           |||||| |||||||||| ||||    | |||||||    
T  39027606 aacaaaataccaaggactaaaaccaaatattctatatttgcaaagactaaaatcaaaaaaaatattttataaggactaaaactaaaatatcaaatatttg 39027705  T
Q  165 cggggaccatttccatatttaagcgataattgatgat 201  Q
    | ||||||||||||||||||||||  |||||||||||    
T  39027706 cagggaccatttccatatttaagccttaattgatgat 39027742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 33802 - 33871
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||| ||||||||||||||||||||||||| || ||| ||| ||| || |||||||    
T  33802 attttacaaggactaaaataaaataccaaggaccaaaaccaaattttttatatttacagagaataaaacc 33871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 194
Target Start/End: Complemental strand, 42154831 - 42154773
Alignment:
Q  135 agggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagcgataat 194  Q
    ||||||||||||||||||||| ||||||| ||  |||||||||||||||||||| |||||    
T  42154831 agggactaaaaccaaaacgca-gatatttacgaagaccatttccatatttaagccataat 42154773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 33619034 - 33618976
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcag 108  Q
    ||||||||| ||  ||||||||||||||| ||||||||||||||||| ||| |||||||    
T  33619034 attttacaaagacgaaaacaaaataccaacgaccaaaaccaaatattttatatttgcag 33618976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 51999619 - 51999570
Alignment:
Q  44 gaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaat 93  Q
    |||||||||||||||||| |||||||||||| ||||||  ||||||||||    
T  51999619 gaaatgattttacaaggactaaaacaaaatatcaaggattaaaaccaaat 51999570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 9e-60; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 27934624 - 27934450
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  27934624 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgaagggacta 27934525  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  27934524 aaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaagc 27934450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 29838504 - 29838678
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  29838504 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatttttgcaaggacta 29838603  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29838604 aaaccaaaaaaatatttttatatggactaaaaccaaaacgcaagatatttgcagggaccatttccatatttaagc 29838678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 52835718 - 52835544
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  52835718 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 52835619  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  52835618 aaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagggaccatttccatatttaagc 52835544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 50645645 - 50645464
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  50645645 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggatcaaaaccaaatattctatttttgcaaggacta 50645546  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagcgataatt 195  Q
    |||||           |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  50645545 aaaccaaaaaaatatttttataggaactaaaaccaaaacgcaagatatttgcagggaccatttccatatttaagccataatt 50645464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 16056521 - 16056350
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||    
T  16056521 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaatgaccaaaaccaaatattctatatttgcagggacta 16056422  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaa 186  Q
    |||||          ||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  16056421 aaaccaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccaattccatatttaa 16056350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 49500016 - 49499842
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  49500016 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcagggacta 49499917  T
Q  115 aaa-ccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| ||          ||||||||||||||||||||||| | ||||||||||  |||||||||||||||||||||    
T  49499916 aaacccaaaaaatatttttatagggactaaaaccaaaacaccagatatttgcaaggaccatttccatatttaagc 49499842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 42093605 - 42093777
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||    
T  42093605 atgaatattattgggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggatta 42093704  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaag 187  Q
    ||| |          |||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||    
T  42093705 aaaacaaaaaaatattttatagggactaaaatcaaaacgccagatatttgcagggaccatttccatatttaag 42093777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 46962792 - 46962966
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||    
T  46962792 atgaatattatagggatcaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagaaccaaaaccaaatattctatatttgcagggatta 46962891  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||    
T  46962892 aaaccaaaaaaatatttttatagggactaaaaccaatacgccagatatttgcagggaccatttccatatttaagc 46962966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 38807711 - 38807539
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38807711 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattgaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 38807612  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaa 186  Q
    |||||           |||||| || ||||||||||||||| |||||||| | |||||||||| |||||||||    
T  38807611 aaaccaaaaaaatatttttataagggctaaaaccaaaacgccagatatttacagggaccattttcatatttaa 38807539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 23 - 188
Target Start/End: Complemental strand, 27285135 - 27284969
Alignment:
Q  23 tatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-nn 121  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       
T  27285135 tatagagaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaaccaaa 27285036  T
Q  122 nnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
            |||||||| ||||||| ||||| || |||||||||| ||||||||||||||||||||||    
T  27285035 aaaatatttttataggaactaaaatcaaaatgccagatatttgcagggaccatttccatatttaagc 27284969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 33162530 - 33162704
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  33162530 atgaatattatacggaccaatttcaatatgaaatgattttacaaggattaacacaaaatatcaaggaccaaaaccaaatattctatatttgcaaggacta 33162629  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||||||||||||| ||||||  |||||||| ||||||||||||||||||||||||    
T  33162630 aaaccaaaaaaatatttttatagggactaaaactaaaacgtcagatatttacggggaccatttccatatttaagc 33162704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 7029557 - 7029384
Alignment:
Q  16 tgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaa 115  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  7029557 tgaatattatagggatcaatttcaatatgaaatgattttacaaggattaaaacaaaataccgaagaccaaaaccaaatattctatatttgcagggactaa 7029458  T
Q  116 aacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||           ||||||||||||| ||| ||||||| |||||||||| || |||||||||||||||||||    
T  7029457 aaccaaaaaaatatttttatagggactagaacaaaaacgccagatatttgcaggaaccatttccatatttaagc 7029384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 14546046 - 14546219
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  14546046 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgcagggacta 14546145  T
Q  115 aaac-cnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaag 187  Q
    |||| |          |||| || |||| ||||||||| |  |||||||||| |||||||||||||||||||||    
T  14546146 aaactcaaaaaatatttttacagtgactgaaaccaaaatgtcagatatttgcagggaccatttccatatttaag 14546219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 186
Target Start/End: Original strand, 21323101 - 21323270
Alignment:
Q  19 atattataggga-ccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  21323101 atattatagggatccaatttcaatatgaaatgattttataaggattaaaacaaaataccaaggattaaaaccaaatattctatatttgcagggactaaaa 21323200  T
Q  118 cc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaa 186  Q
    ||           ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  21323201 ccaaaaaaaaaaatttatagggactaaaaccaaaacgctagatatttgcagggaccatttccatatttaa 21323270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 26582822 - 26582995
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  26582822 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggacta 26582921  T
Q  115 aaa-ccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaag 187  Q
    ||| |           |||| ||||||||||| ||||| |  |||||||||| |||||||||||||||||||||    
T  26582922 aaatcaaaaaaatatttttacagggactaaaatcaaaatgtcagatatttgcagggaccatttccatatttaag 26582995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 32315586 - 32315759
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| | || |||    
T  32315586 atgaatattatagggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaggaccaaaaccaaatattctatatttgtatggccta 32315685  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||          |||| |||||||||||||||||    |||||||||| ||||||||||||||||||||||    
T  32315686 aaaccaaaaaatatttttacagggactaaaaccaaaatatcagatatttgcagggaccatttccatatttaagc 32315759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 55092380 - 55092278
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  55092380 atgaatattatagagaccaatttcaatatgaaatgattttacaaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcacggacta 55092281  T
Q  115 aaa 117  Q
    |||    
T  55092280 aaa 55092278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 16 - 188
Target Start/End: Complemental strand, 49121888 - 49121714
Alignment:
Q  16 tgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaa 115  Q
    ||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| ||||||||||||| ||||||| ||| |||||| |||||||    
T  49121888 tgaatattatagggaccaatttcaatatgaaataattttacaatgattaaaacaaaatatcaaggaccaaaactaaatattttatatttgcatggactaa 49121789  T
Q  116 aacc--nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||            ||||||||| |||||| ||||| || |||||||||| ||||||||||||||||||||||    
T  49121788 aaccaaaaaaagtatttttataggggctaaaatcaaaatgccagatatttgcagggaccatttccatatttaagc 49121714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 17110061 - 17110146
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctat 100  Q
    ||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||| ||  || ||||||||||||||    
T  17110061 atgaatattatagagaccaatttcaatatgaaatgattttacaagaattaaaacaaaataccaaagattaagaccaaatattctat 17110146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 49500088 - 49500157
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||| |||||||||||    
T  49500088 attttacaaggattaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaaggactaaaacc 49500157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 32315513 - 32315447
Alignment:
Q  51 ttttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||| |||||||||    
T  32315513 ttttacaaggactaaaacaaaataccaaggaccaaaaccaaattttctatatttgcaaggactaaaa 32315447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 17109989 - 17109920
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||| |||||||||    
T  17109989 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcaggcactaaaacc 17109920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 52835790 - 52835857
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| || ||| ||||||||||||||||    
T  52835790 attttacaaggactaaaacaaaatacgaaggaccaaaaccaaattttttatatttgcagggactaaaa 52835857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 42093533 - 42093464
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| || ||| ||||||| ||||||||||    
T  42093533 attttacaaggactaaaacaaaataccaaggatcaaaaccaaattttttatatttgcagagactaaaacc 42093464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 46962720 - 46962651
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||| ||| |||||||||||| |||||||||||||||||| || ||| ||||||||||||||||||    
T  46962720 attttacagggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcagggactaaaacc 46962651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 50645717 - 50645786
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||| |||||||| ||||||||||||||||| || ||| ||||||||||||||||||    
T  50645717 attttacaaggactaaatcaaaatacaaaggaccaaaaccaaattttttatatttgcagggactaaaacc 50645786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 889297 - 889197
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||| ||||||| | ||||| |||   |||||||||||| ||||||||||||||||||||||||||||||| || ||| ||| | || ||||||||    
T  889297 atattataaggaccaaatccaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttacgggaactaaaac 889198  T
Q  119 c 119  Q
    |    
T  889197 c 889197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 14545974 - 14545906
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaa-tattctatttttgcagggactaaaa 117  Q
    |||||||||||| |||||||||||||||||||||||||||||| | || ||| ||||||||||||||||    
T  14545974 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttttatatttgcagggactaaaa 14545906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 29838432 - 29838364
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| || ||| ||||||| |||||||||    
T  29838432 attttacaaggactaaaacaaaatacaaaggaccaaaaccaaattttttatatttgcagagactaaaac 29838364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 26582750 - 26582691
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagg 109  Q
    |||||||||||| |||||||||||| |||||||||||||||||| |||||| ||||||||    
T  26582750 attttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttctatatttgcagg 26582691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 33162458 - 33162389
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| || |   ||||||||||||||||||    
T  33162458 attttacaaggactaaaacaaaataccaaggatcaaaaccaaatttttttaatttgcagggactaaaacc 33162389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 55092452 - 55092521
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||| || ||| ||||||| ||||||||||    
T  55092452 attttacaatgattaaaacaatataccaaggaccaaaatcaaattttttatatttgcagagactaaaacc 55092521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 27285183 - 27285282
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||| ||||||| | ||||| |||   ||||||||| || |||||||||||| ||| |||||||||||||  || ||| |||||||||||||||||    
T  27285183 atattataaggaccaaatccaatatgaatcaattttacaaagactaaaacaaaatatcaatgaccaaaaccaaactttttatatttgcagggactaaaac 27285282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 27934696 - 27934763
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| |||||||||||| ||||||||||||||||| | | ||| ||| ||||||||||||    
T  27934696 attttacaaggactaaaacaaaataacaaggaccaaaaccaaaaaatttatatttacagggactaaaa 27934763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 38807783 - 38807923
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-nnnnnnnnnntttatagggactaaaacca 148  Q
    ||||| ||| || ||||| |||||||  |||||||||||||||| || ||| ||||||||||||||||||           |||| ||||||||||| ||    
T  38807783 atttttcaaagactaaaataaaatacagaggaccaaaaccaaattttttatatttgcagggactaaaaccaaacatatatttttacagggactaaaatca 38807882  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagcg 189  Q
    ||| |  |||||||| | ||||| |||||||||||||||||    
T  38807883 aaatgtcagatatttacagggactatttccatatttaagcg 38807923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 17109797 - 17109747
Alignment:
Q  137 ggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaag 187  Q
    ||||||||||||||| || |||||||||| ||||| |||| ||||||||||    
T  17109797 ggactaaaaccaaaatgctagatatttgcagggactattttcatatttaag 17109747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 19590495 - 19590437
Alignment:
Q  130 tttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||||| |||||||| |||||||  |||||||||| | |||| |||||||||||||||    
T  19590495 tttatagcgactaaaatcaaaacgtcagatatttgcagagaccgtttccatatttaagc 19590437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 55092262 - 55092204
Alignment:
Q  130 tttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||||| ||||||||||||||||  |||||||| | |||| ||||| |||||||||||    
T  55092262 tttatagagactaaaaccaaaacgtcagatatttacagggatcattttcatatttaagc 55092204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817 (Bit Score: 113; Significance: 2e-57; HSPs: 2)
Name: scaffold0817
Description:

Target: scaffold0817; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 4156 - 3982
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||    
T  4156 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaattttctatatttacagggacta 4057  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  4056 aaaccaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaagc 3982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0817; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 4227 - 4366
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-nnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||           |||| ||||||||||||||    
T  4227 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaacca 4326  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||||| ||||| |||| |||||||||||    
T  4327 aaatgtcagatatttgcagggactattttcatatttaagc 4366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 6943830 - 6943656
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6943830 atgaatattatagggactaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 6943731  T
Q  115 aaa-ccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |           ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  6943730 aaatcaaaaaaatatttttatagggactaaaaccaaaacgccaaatatttgcggggaccatttccatatttaagc 6943656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 13154412 - 13154238
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  13154412 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaatcaaatattctatatttgcagggacta 13154313  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||| |||||||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  13154312 aaaccaaaaaaatatttttagagggactaaaaccaaaacaccagatatttgcagggaccatttccatatttaagc 13154238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 26479504 - 26479678
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  26479504 atgaatattatagggactaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgcagggacta 26479603  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  26479604 aaaccaaatttttttttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatattaaagc 26479678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 15 - 185
Target Start/End: Complemental strand, 31685843 - 31685672
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  31685843 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggacta 31685744  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatattta 185  Q
    |||||           |||||||||| |||||||||||||| |||||||||| |||||| ||||||||||||    
T  31685743 aaaccaaaaaaatatttttatagggattaaaaccaaaacgctagatatttgcagggaccttttccatattta 31685672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 188
Target Start/End: Complemental strand, 6891948 - 6891778
Alignment:
Q  18 aatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6891948 aatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 6891849  T
Q  118 ccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
     |          ||| ||| ||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  6891848 acaaaaaaaatatttttagagactaaaacaaaaacgccagatatttgcagggaccatttccatatttaagc 6891778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 18764495 - 18764669
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18764495 atgaattttatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 18764594  T
Q  115 aaac-cnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||            ||||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||    
T  18764595 aaacaaataaacaaaatttatagggactataaccaaaacgccagatatttgcagggaccattttcatatttaagc 18764669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 220685 - 220512
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  220685 atgaatattatagtgaccaatttcaatataaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 220586  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||          ||||||||||||||| |||||| || |||||||| | ||||||||||||||||||||||    
T  220585 aaaccaaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaagc 220512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 689840 - 689667
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  689840 atgaatattatagtgaccaatttcaatataaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 689741  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||          ||||||||||||||| |||||| || |||||||| | ||||||||||||||||||||||    
T  689740 aaaccaaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaagc 689667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 734308 - 734135
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  734308 atgaatattatagtgaccaatttcaatataaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 734209  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||          ||||||||||||||| |||||| || |||||||| | ||||||||||||||||||||||    
T  734208 aaaccaaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaagc 734135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 858204 - 858031
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  858204 atgaatattatagtgaccaatttcaatataaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 858105  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||          ||||||||||||||| |||||| || |||||||| | ||||||||||||||||||||||    
T  858104 aaaccaaaaaatatttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaagc 858031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 31403123 - 31403297
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  31403123 atgaatattatagggaccaatctcaataagaaatgattttacaaggattaaaacaaaatacaaaggaccaaaaccaaatattctatatttgaagggacta 31403222  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||| | |||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  31403223 aaaccaaaaaaatatttttataagaactaaaaccaaaacaccagatatttgcagggaccatttccatatttaagc 31403297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 15 - 193
Target Start/End: Complemental strand, 31186546 - 31186368
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| ||||| |||| |||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  31186546 atgaatattataaggaccgattttaatatgaaatgattttacaag-attaaaacaaaataccaatgaccaaaaccaaatattctatatttgcagggacta 31186448  T
Q  115 aaa-ccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagcgataa 193  Q
    ||| |           ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||    
T  31186447 aaatcaaaaaaatatttttatagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaagccataa 31186368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 9180218 - 9180044
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||    
T  9180218 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaaaaccaaggaccacaaccaaatattctatatttgcatggacta 9180119  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||| | ||||| |||||||| |||||||||| |||||||||| |||||||||||    
T  9180118 aaaccaaaaaaatatttttataggaattaaaatcaaaacgccagatatttgcagggaccattttcatatttaagc 9180044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 24332435 - 24332331
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  24332435 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggacccaaaccaaatattctatatttgcagggacta 24332336  T
Q  115 aaacc 119  Q
    |||||    
T  24332335 aaacc 24332331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 2835298 - 2835124
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||| ||| ||| |||||    
T  2835298 atgaatattatagggaccaatttcagtacgaaatgattttacaatgattaaaacaaaataccgaggaccaaaaccaaatattttatatttacagagacta 2835199  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||  ||||||||||||||   |||||||||| | ||||||||||||||||||||    
T  2835198 aaaccaaaaaaatatttttatagaaactaaaaccaaaacatcagatatttgcagagaccatttccatatttaagc 2835124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 3272893 - 3272816
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaa 92  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3272893 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaa 3272816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 13405621 - 13405517
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||| ||||| |||    
T  13405621 atgaatattataaggaccaatttcaatatgaaatgattttacaatgattaaaacaaaataccaaagaccaaaacaaaatattctatatttacagggtcta 13405522  T
Q  115 aaacc 119  Q
    |||||    
T  13405521 aaacc 13405517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 37586227 - 37586307
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatat 95  Q
    |||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37586227 atgaatattatatggaccaatttcaatatgaaatgattttaccaggattaaaacaaaataccaaggaccaaaaccaaatat 37586307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 3272965 - 3273104
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa-ccnnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||||||| ||||||||||||||||||||||||||||| | || ||| |||||||||||||||| |           |||||||||||||||||||    
T  3272965 attttacaaggactaaaacaaaataccaaggaccaaaaccaagttttttatatttgcagggactaaaatcaaaaaaatatttttatagggactaaaacca 3273064  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |  |||||||||| ||||| |||| || ||||||||    
T  3273065 aaatgtcagatatttgcagggactattttcacatttaagc 3273104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 13405693 - 13405762
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| |||| |||||||||||||    
T  13405693 attttacaaggaataaaacaaaataccaaggaccaaaaccaaattttttatatttgaagggactaaaacc 13405762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 31685916 - 31685985
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| || ||| ||||||||||||||||||    
T  31685916 attttacaaggactaaaacaaaatactaaggaccaaaaccaaattttttatatttgcagggactaaaacc 31685985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 24332476 - 24332574
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||| | ||||||| ||||||| |||   |||||||||||| ||||||||||||||||||||||||||||||| || || | ||||||||||||||||    
T  24332476 atattacaaggaccaaattcaatatgaatcaattttacaaggactaaaacaaaataccaaggaccaaaaccaaatttttta-tattgcagggactaaaac 24332574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 9180290 - 9180359
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||||||||||| |||||||||||||||||| || ||| |||||| |||||||||||    
T  9180290 attttacaaggactaaaacaaaatatcaaggaccaaaaccaaattttttatatttgcaaggactaaaacc 9180359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 13154484 - 13154553
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    ||||||||||||  |||||||||||||||||||||||||||| | || ||| ||||||||||||||||||    
T  13154484 attttacaaggacaaaaacaaaataccaaggaccaaaaccaatttttttatatttgcagggactaaaacc 13154553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 31186587 - 31186687
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||| ||||||| | ||||| |||   |||||||||||| || |||||||||||||||||||||||||||| || ||  ||| |||||||||||||    
T  31186587 atattataaggaccaaatccaatatgaatcaattttacaaggactacaacaaaataccaaggaccaaaaccaaattttttagatttacagggactaaaac 31186686  T
Q  119 c 119  Q
    |    
T  31186687 c 31186687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 3272806 - 3272748
Alignment:
Q  130 tttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||    
T  3272806 tttatagggactaaaaccaaaacgccagatatttgcagggatcatttacatatttaagc 3272748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 27993490 - 27993560
Alignment:
Q  18 aatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaac 88  Q
    |||||||||||||||||||||| || |||  ||||||||| ||| |||||||||| |||||||||||||||    
T  27993490 aatattatagggaccaatttcattatgaatggattttacagggactaaaacaaaacaccaaggaccaaaac 27993560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 28050792 - 28050862
Alignment:
Q  18 aatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaac 88  Q
    |||||||||||||||||||||| || |||  ||||||||| ||| |||||||||| |||||||||||||||    
T  28050792 aatattatagggaccaatttcattatgaatggattttacagggactaaaacaaaacaccaaggaccaaaac 28050862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 188
Target Start/End: Complemental strand, 26479460 - 26479325
Alignment:
Q  53 ttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaaccnnnnnnnnnntttatagggactaaaaccaaaac 152  Q
    ||||||||| |||||||||||||||| |||||||||||||  || ||| ||||||| ||||||||||          |||| |||||||||||||||||     
T  26479460 ttacaaggactaaaacaaaataccaatgaccaaaaccaaaatttttatatttgcagtgactaaaaccaatttttttttttacagggactaaaaccaaaat 26479361  T
Q  153 gcaagatatttgcggggaccatttccatatttaagc 188  Q
    |  | |||||||| ||||| |||| || ||||||||    
T  26479360 gtcaaatatttgcagggactattttcacatttaagc 26479325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 31403051 - 31402982
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    ||||||||| ||  |||||||| |||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  31403051 attttacaaagacgaaaacaaattaccaacgaccaaaaccaaatattttatatttgcagggactaaaacc 31402982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 188
Target Start/End: Original strand, 2835342 - 2835477
Alignment:
Q  53 ttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa-ccnnnnnnnnnntttatagggactaaaaccaaaa 151  Q
    ||||||||| ||||||||||||||||| ||||||||| ||| || ||| |||||||||||||||| |           |||| || ||||||||||||||    
T  2835342 ttacaaggactaaaacaaaataccaagaaccaaaacc-aattttttatatttgcagggactaaaatcaaaaaaatatttttacagcgactaaaaccaaaa 2835440  T
Q  152 cgcaagatatttgcggggaccatttccatatttaagc 188  Q
     |  |||||||||||||||| |||| |||||||||||    
T  2835441 tgtcagatatttgcggggactattttcatatttaagc 2835477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 6892023 - 6892090
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||||||| |||||||||| ||||||||||||||||||| |   ||||||| |||||||||||||    
T  6892023 attttacaaggactaaaacaaaacaccaaggaccaaaaccaaa-aaaatatttttacagggactaaaac 6892090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 20112573 - 20112533
Alignment:
Q  30 accaatttcaataagaaatgattttacaaggattaaaacaa 70  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  20112573 accaatttcaatatgaaatgattttacaaggattaaaacaa 20112533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 37586156 - 37586113
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaat 93  Q
    |||||||||||| |||||||||||||||||||||||||| ||||    
T  37586156 attttacaaggactaaaacaaaataccaaggaccaaaactaaat 37586113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 6943902 - 6943971
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||| |||||| |||| ||||||| ||||| ||  || ||||||||||||||||||    
T  6943902 attttacaaggactaaaataaaatatcaagaaccaaaatcaaatttttcatatttgcagggactaaaacc 6943971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 18764423 - 18764354
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    ||||||||||||  ||||||||||||||| |||||||||||||  || ||| |||| ||||||| |||||    
T  18764423 attttacaaggacaaaaacaaaataccaaagaccaaaaccaaagtttttatatttgaagggactcaaacc 18764354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 37586353 - 37586398
Alignment:
Q  141 taaaaccaaaacgcaagatatttgcggggaccatttccatatttaa 186  Q
    |||||||||||||| |||||||||   |||||||||||||||||||    
T  37586353 taaaaccaaaacgccagatatttgtaaggaccatttccatatttaa 37586398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 31186670 - 31186726
Alignment:
Q  130 tttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaa 186  Q
    |||| ||||||||||||||||| |  |||||||||| ||||| |||| |||||||||    
T  31186670 tttacagggactaaaaccaaaatgtcagatatttgcagggactattttcatatttaa 31186726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 2e-57; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 10461555 - 10461729
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  10461555 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaatgaccaaaaccaaatattctatatttgcagggacta 10461654  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  10461655 aaaccaaaaaaatatttttatagggactaaaatcaaaacgccagatatttgcagggaccatttccatatttaagc 10461729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 6542469 - 6542642
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  6542469 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggactaaaaccaaatattctatatttgcagggacta 6542568  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||           ||||||||||||||| |||||| || |||||||| | ||||||||||||||||||||||    
T  6542569 aaacaaatttttttttttatagggactaaatccaaaatgccagatatttacagggaccatttccatatttaagc 6542642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 18 - 188
Target Start/End: Complemental strand, 14868843 - 14868676
Alignment:
Q  18 aatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  14868843 aatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaatactaaggaccaaaaccaaatattctatatttgcagtgactaaaa 14868744  T
Q  118 ccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||          ||||||||||||||||||||||||| |||||||||  |||||| |||||||||||||||    
T  14868743 cc---aattttttttatagggactaaaaccaaaacgccagatatttggagggaccgtttccatatttaagc 14868676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 18786191 - 18786362
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  18786191 atgaatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgca-ggacta 18786289  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaa 186  Q
    |||||           |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  18786290 aaaccaaaaaaatatttttacagggactaaaaccaaaacgccagatatttgcagggaccatttccatatttaa 18786362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 18 - 188
Target Start/End: Original strand, 43197114 - 43197285
Alignment:
Q  18 aatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggact-aaa 116  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  43197114 aatattatagggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaaa 43197213  T
Q  117 accnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||           ||||||||||||||||| ||||| | |||||||||| ||||||||||||||||||||||    
T  43197214 acaaaaaaatatttttatagggactaaaacaaaaacaccagatatttgcagggaccatttccatatttaagc 43197285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 15969603 - 15969429
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  15969603 atgaatattataaggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagagacta 15969504  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||||||||||||||||||||| | |||||||   |||||||||||||||||||||    
T  15969503 aaaccaaaaatatatttttatagggactaaaaccaaaacgccaaatatttgtaaggaccatttccatatttaagc 15969429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 5933335 - 5933509
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5933335 atgaatattatagggaccgatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 5933434  T
Q  115 aaac-cnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||            |||||||| |||||| ||||||||| |||||||| | |||||||||| |||||||||||    
T  5933435 aaacaaaaaatatatttttataggaactaaatccaaaacgctagatatttacagggaccattttcatatttaagc 5933509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 3598584 - 3598413
Alignment:
Q  17 gaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaa 116  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3598584 gaatattatagggaccaatttcaatatgaaatgattttacaagaattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggactaaa 3598485  T
Q  117 acc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaag 187  Q
    |||           |||| |||||||||| |||||| |  |||||||||| |||||||||| ||||||||||    
T  3598484 accaaaaaaatatttttacagggactaaatccaaaatgtcagatatttgcagggaccattttcatatttaag 3598413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 24491053 - 24491227
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  24491053 atgaatattatagggaccaatttcaatatgaaatgattttacaaggactaaaacaaaatatcaaggaccaaaaccaaatattctatatttgcagggacta 24491152  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||| ||||||||||||||||| |  ||||  |||| ||||||||||||||||||||||    
T  24491153 aaaccaaacaaatatttttacagggactaaaaccaaaatgtcagattattgcagggaccatttccatatttaagc 24491227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 15 - 187
Target Start/End: Complemental strand, 41137314 - 41137141
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||    
T  41137314 atgaatattatagggaccgatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaactaaatattctatatttgcaaggacta 41137215  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaag 187  Q
    |||||           |||||||| | |||||||||||||| |||||||||| | || ||||||||||||||||    
T  41137214 aaaccaaaaaaatatttttataggtattaaaaccaaaacgccagatatttgcagtgatcatttccatatttaag 41137141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 186
Target Start/End: Original strand, 4122787 - 4122959
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||    
T  4122787 atgaatattataggggccaatttcaatatgaaatgattttactaggattaaaacaaaatatcaaggaccaaaaccaaatattctatatttacagggacta 4122886  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaa 186  Q
    |||||           |||||||||||||||| |||||||| |||||||| || ||| |||||||||||||||    
T  4122887 aaaccaaaaaaatatttttatagggactaaaagcaaaacgccagatatttacgaggaacatttccatatttaa 4122959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 6497365 - 6497263
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6497365 atgaatattatagggaccaatttcaatatgaaatgattttataaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcagggacta 6497266  T
Q  115 aaa 117  Q
    |||    
T  6497265 aaa 6497263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 22394334 - 22394508
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  22394334 atgaatattatagggatcaagttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatatttgcatggacta 22394433  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||| |||||| ||||||||| |||||||| | ||||| |||| |||||||||||    
T  22394434 aaaccaaaaaaatatttttataggaactaaatccaaaacgctagatatttaccgggactattttcatatttaagc 22394508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 29991275 - 29991173
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||| ||    
T  29991275 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaagaaccaaaaccaaatattttatatttgcagggatta 29991176  T
Q  115 aaa 117  Q
    |||    
T  29991175 aaa 29991173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 40588861 - 40589033
Alignment:
Q  16 tgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggact-a 114  Q
    |||||||||||| ||||||||| |||| |||||||||||||||| ||||||||||||||||||||| | |||||||||||| ||| |||||||||||| |    
T  40588861 tgaatattatagagaccaattttaatatgaaatgattttacaagaattaaaacaaaataccaaggatc-aaaccaaatattttatatttgcagggactaa 40588959  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||           |||||||||| ||||| |||||| | |||||||||| ||||||||||||||||||||||    
T  40588960 aaacaaaaaattttttttatagggattaaaagcaaaactccagatatttgcagggaccatttccatatttaagc 40589033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 33 - 188
Target Start/End: Original strand, 40589481 - 40589636
Alignment:
Q  33 aatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggact-aaaaccnnnnnnnnnntt 131  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||||||| | |||||||||||| ||| |||||||||||| |||||           ||    
T  40589481 aattttaatatgaaatgattttacaagaattaaaacaaaataccaaggatc-aaaccaaatattttatatttgcagggactaaaaacaaatttttttttt 40589579  T
Q  132 tatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  40589580 tatagggattaaaagcaaaacgccagatatttgcagggaccatttccatatttaagc 40589636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 7133298 - 7133213
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctat 100  Q
    |||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||| |||||| ||||| ||||||||||||    
T  7133298 atgaatattatagggatcaatttcaatatgaaatgattttacaatgattaaaacaaaatatcaaggatcaaaatcaaatattctat 7133213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 50 - 186
Target Start/End: Complemental strand, 18786119 - 18785983
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-nnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||           |||||||||||||||||||    
T  18786119 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatattctatatttgcaaggactaaaaccaaaaaaatatttttatagggactaaaacca 18786020  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaa 186  Q
    ||| || | |||||||| || ||||||||| |||||||    
T  18786019 aaatgcca-atatttgcaggaaccatttccttatttaa 18785983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 3598658 - 3598727
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||    
T  3598658 attttacaaggactaaaacaaaataccaaggaccaaaaccaaatttcctatatttgcagggactaaaacc 3598727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 24490981 - 24490843
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaaccnnnnnnnnnntttatagggactaaaaccaa 149  Q
    |||||||||||| |||||||||||||| | || ||||||||||| |||||| ||||||||||||||||||          |||| |||||||||||||||    
T  24490981 attttacaaggactaaaacaaaataccgatgatcaaaaccaaattttctatatttgcagggactaaaaccaaaaaatatttttacagggactaaaaccaa 24490882  T
Q  150 aacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    || |  |||||||||| ||||| |||| || ||||||||    
T  24490881 aatgtcagatatttgcagggactattttcacatttaagc 24490843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 5933263 - 5933196
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||    
T  5933263 attttacaaggactaaaacaaaataccaaagaccaaaaccaaatattttatatttgcagggactaaaa 5933196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 10461483 - 10461416
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||    
T  10461483 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 10461416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 7133370 - 7133439
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  7133370 attttacaaggactaaaaaaaaataccaaggaccaaaaccaaaaattttatatttgcagggactaaaacc 7133439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 51 - 188
Target Start/End: Complemental strand, 22394261 - 22394123
Alignment:
Q  51 ttttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-nnnnnnnnnntttatagggactaaaaccaa 149  Q
    ||||||||||| |||||||||||| || ||||||||||||||| || ||| ||||||||||||||||||           |||| |||||||||||||||    
T  22394261 ttttacaaggactaaaacaaaatatcagggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttttacagggactaaaaccaa 22394162  T
Q  150 aacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    || |  |||||||||| ||||| |||| |||||||||||    
T  22394161 aatgtcagatatttgcagggacaattttcatatttaagc 22394123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 4122715 - 4122648
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    ||||||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||    
T  4122715 attttacaaagactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 4122648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 14868918 - 14868986
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| || ||| ||||||||||||||||||    
T  14868918 attttacaaggactaaaacaaaataccaaggatcaaaaccaaat-ttttatatttgcagggactaaaacc 14868986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 188
Target Start/End: Original strand, 6497406 - 6497576
Alignment:
Q  19 atattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa- 117  Q
    |||||| | ||||||| | ||||| ||| | |||||||||||| |||||||||||| |||||| ||||||||||| || ||| |||||||| |||||||     
T  6497406 atattacaaggaccaaatccaatatgaattaattttacaaggactaaaacaaaatatcaaggatcaaaaccaaattttttatatttgcaggaactaaaat 6497505  T
Q  118 ccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |           |||| ||||||||||||||||| |  |||||||||| ||||| |||| |||||||||||    
T  6497506 caaaaaaatatttttacagggactaaaaccaaaatgtcagatatttgcagggacaattttcatatttaagc 6497576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 15969675 - 15969742
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    |||||||||| | | ||||||||||||||||||||||||||||| || ||| ||||||||||||||||    
T  15969675 attttacaagaacttaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaa 15969742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 6542397 - 6542328
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||| ||||||||||||| ||||| ||||| || ||| ||||||||||||||||||    
T  6542397 attttacaaggactaaaataaaataccaaggatcaaaatcaaattttttatatttgcagggactaaaacc 6542328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 43197039 - 43196970
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||||||||| || |||||||||||| |||| || ||| ||||||||||||||||||    
T  43197039 attttacaaggactaaaacaaaacactaaggaccaaaactaaattttttatatttgcagggactaaaacc 43196970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 29991325 - 29991414
Alignment:
Q  28 ggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    ||||||||| ||||| |||   |||||||||||| |||||||||||| ||| |||||||| ||||| || ||| |||| |||||||||||    
T  29991325 ggaccaattccaatatgaatcaattttacaaggactaaaacaaaatatcaaagaccaaaatcaaattttttatatttgtagggactaaaa 29991414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 25329235 - 25329167
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||||||| ||||||| ||||| ||||||||||| ||||| || ||| |||| ||||||||||||    
T  25329235 attttacaaggactaaaacataatacgaaggaccaaaatcaaattttttatatttgtagggactaaaac 25329167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 41137386 - 41137428
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaa 92  Q
    |||||||||||| |||||||||||||||||||| |||||||||    
T  41137386 attttacaaggactaaaacaaaataccaaggactaaaaccaaa 41137428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 109; Significance: 5e-55; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 4597 - 4771
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  4597 atgaatattatagggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattatatatttgcagggacta 4696  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||||||||||||||||||||  | |||||||| ||||||||||||||||||||||    
T  4697 aaaccaaaaaaaaaaatttatagggactaaaaccaaaacgtcaaatatttgcagggaccatttccatatttaagc 4771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 101; Significance: 3e-50; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 212622 - 212796
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  212622 atgaatattataggaaccaatttcaatatgaaatgattttacaaggattaaaacaaaatacgaaagaccaaaaccaaatattctatatttgcagggacta 212721  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           |||||||||||||||||||||||   |||||||| ||||||||||||||||||||||||    
T  212722 aaaccaaaaaaatatttttatagggactaaaaccaaaacatcagatatttacggggaccatttccatatttaagc 212796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 212550 - 212411
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc-nnnnnnnnnntttatagggactaaaacca 148  Q
    |||||||||||| ||||||||||||||||||||||||||||||  || |   |||||||||||| |||||           |||| ||||||||||||||    
T  212550 attttacaaggactaaaacaaaataccaaggaccaaaaccaaaattttttaatttgcagggacttaaaccaaaaaaatatttttacagggactaaaacca 212451  T
Q  149 aaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||| |   ||||||||||||||| |||| |||||||||||    
T  212450 aaatgtctgatatttgcggggactattttcatatttaagc 212411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 43487 - 43662
Alignment:
Q  15 atgaatattataggg-accaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggact 113  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  43487 atgaatattataggggaccaatttcaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggact 43586  T
Q  114 aaaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||||           |||||||| |||||||||||||||| ||||||||||  | |||||||||||||||||||    
T  43587 aaaaccaaaaaaaaaaatttataggaactaaaaccaaaacgccagatatttgcaagaaccatttccatatttaagc 43662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 50 - 118
Target Start/End: Complemental strand, 43415 - 43347
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaac 118  Q
    |||||||||| | ||||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
T  43415 attttacaagtactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaac 43347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 89; Significance: 4e-43; HSPs: 2)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 8752 - 8922
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  8752 atgaatattttagggaccaatttcaatatgaaatgattttacaaagattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcagggacta 8851  T
Q  115 aaac-cnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatattt 184  Q
    ||||            ||||||||||||||| ||||||||| | |||| | ||||||||||||||||||||    
T  8852 aaacaaaaaaaatatttttatagggactaaatccaaaacgccaaatatatacggggaccatttccatattt 8922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 8680 - 8611
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||    
T  8680 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaacc 8611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 89; Significance: 4e-43; HSPs: 3)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 15 - 188
Target Start/End: Complemental strand, 25296 - 25122
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||    
T  25296 atgaatattataggaaccaatttcaatatgaaatgattttacaaggattaaaacaaaatacgaaggaccaaaaccaaatattctatatttacagggacta 25197  T
Q  115 aaacc-nnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||           ||||||||||||||||||||||||  | ||||||   |||||||||| |||||||||||    
T  25196 aaaccaaaaaaatatttttatagggactaaaaccaaaacgtcaaatatttattgggaccattttcatatttaagc 25122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 25356 - 25425
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||| |   ||||||||||||||||||    
T  25356 attttacaaggactaaaataaaataccaaggaccaaaaccaaaaatttttaatttgcagggactaaaacc 25425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 25462 - 25520
Alignment:
Q  130 tttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||| |||||||||||||||||    |||||||||||||||| |||| |||||||||||    
T  25462 tttacagggactaaaaccaaaatatcagatatttgcggggactattttcatatttaagc 25520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 36204 - 36377
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggacta 114  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||    
T  36204 atgaatattataaggaccaattttaatatgaaatgattttacaaggattaaaacaaaataccaaggatcaaaaccaaatattctatatttgcaggaacta 36303  T
Q  115 aaaccnnnnnnnnnntttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||           ||||||||||||||||| ||||||  |||||||||| ||||| ||||  ||||||||||    
T  36304 aaacaaaaaaataattttatagggactaaaactaaaacgtcagatatttgcagggactatttttatatttaagc 36377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 36132 - 36063
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||||||||||| ||| |||||||| ||||| || ||| |||||| |||||||||||    
T  36132 attttacaaggactaaaacaaaatatcaaagaccaaaatcaaattttttatatttgcaaggactaaaacc 36063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 77; Significance: 6e-36; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 118198 - 118029
Alignment:
Q  18 aatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaa 117  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||| ||||| |||||  ||||||||||| ||||||||||||||||    
T  118198 aatattatagggaccaatttcaatatgaaatgactttaca-ggattaaaacaaaatacaaaggatcaaaattaaatattctatatttgcagggactaaaa 118100  T
Q  118 ccnnnnnnnnnntt-tatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaag 187  Q
    ||          || ||| ||||||||| ||||||||| |||||||| | |||||||||||||||||||||    
T  118099 ccaaaaaaatatttatatggggactaaatccaaaacgccagatatttacagggaccatttccatatttaag 118029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 118277 - 118346
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||| ||||||||||    
T  118277 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagtgactaaaacc 118346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 70; Significance: 9e-32; HSPs: 3)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 36975 - 37052
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaa 92  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36975 atgaatattatagggaccaatttcaatatgaaataattttacaaggattaaaacaaaataccaaggaccaaaaccaaa 37052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 36903 - 36766
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaaccnnnnnnnnnntttatagggactaaaaccaa 149  Q
    |||||||||||| ||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||          |||  |||||||||||||||    
T  36903 attttacaaggactaaaacaaaataccaaggaccaaaaccaaattttttatatttgcagggactaaaaccaaaaaaatatttt-cagggactaaaaccaa 36805  T
Q  150 aacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    || |  |||||||||| ||||| |||| |||||||||||    
T  36804 aatgtcagatatttgcagggactattttcatatttaagc 36766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 37061 - 37119
Alignment:
Q  130 tttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  37061 tttatagggactaaaaccaaaacgctagatatttgcagggaccatttccatatttaagc 37119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 62; Significance: 6e-27; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 74088 - 74007
Alignment:
Q  15 atgaatattatagggaccaatttcaataagaaatgattttacaaggattaaaacaaaataccaaggaccaaaaccaaatatt 96  Q
    ||||||||||||||||||| ||| |||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  74088 atgaatattatagggaccagttttaatatgaaatgattttataaggattaaaacaaaatacgaaggaccaaaaccaaatatt 74007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 74159 - 74228
Alignment:
Q  50 attttacaaggattaaaacaaaataccaaggaccaaaaccaaatattctatttttgcagggactaaaacc 119  Q
    |||||||||||| |||||||||||||||||||||||| |||||| || ||| ||||||||||||||||||    
T  74159 attttacaaggactaaaacaaaataccaaggaccaaagccaaattttttatatttgcagggactaaaacc 74228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 73990 - 73932
Alignment:
Q  130 tttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||||||| ||||||||||||||  ||||||||| ||||||||||||||||||||||    
T  73990 tttatagggaataaaaccaaaacgccggatatttgcagggaccatttccatatttaagc 73932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Complemental strand, 43967 - 43909
Alignment:
Q  130 tttatagggactaaaaccaaaacgcaagatatttgcggggaccatttccatatttaagc 188  Q
    |||||| |||||||||||||||||  |||||||||| ||||| ||||||||||||||||    
T  43967 tttataaggactaaaaccaaaacgacagatatttgccgggactatttccatatttaagc 43909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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