View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19786_high_42 (Length: 428)

Name: NF19786_high_42
Description: NF19786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19786_high_42
NF19786_high_42
[»] chr1 (9 HSPs)
chr1 (136-413)||(50151317-50151595)
chr1 (143-402)||(43012784-43013040)
chr1 (11-148)||(43011621-43011758)
chr1 (11-94)||(50150075-50150158)
chr1 (11-92)||(38863443-38863524)
chr1 (20-92)||(37285479-37285551)
chr1 (20-106)||(26733421-26733506)
chr1 (11-188)||(14998517-14998694)
chr1 (11-75)||(47215506-47215570)
[»] chr3 (4 HSPs)
chr3 (11-213)||(34020556-34020758)
chr3 (248-413)||(34020758-34020924)
chr3 (11-92)||(19647636-19647717)
chr3 (11-92)||(7944234-7944315)
[»] chr5 (5 HSPs)
chr5 (11-145)||(14136358-14136492)
chr5 (11-92)||(11782173-11782254)
chr5 (11-85)||(1463751-1463825)
chr5 (11-92)||(27514216-27514296)
chr5 (20-92)||(40323402-40323474)
[»] chr8 (4 HSPs)
chr8 (11-85)||(42146071-42146145)
chr8 (11-92)||(27562604-27562686)
chr8 (11-145)||(31664775-31664909)
chr8 (20-92)||(35176361-35176433)
[»] chr6 (3 HSPs)
chr6 (11-145)||(18058406-18058540)
chr6 (22-145)||(30452757-30452880)
chr6 (19-79)||(25049512-25049572)
[»] chr2 (2 HSPs)
chr2 (18-92)||(7000456-7000530)
chr2 (20-92)||(42481219-42481290)
[»] chr7 (2 HSPs)
chr7 (11-92)||(42062104-42062185)
chr7 (11-91)||(27923278-27923357)
[»] chr4 (3 HSPs)
chr4 (11-91)||(42057908-42057988)
chr4 (11-92)||(54453877-54453958)
chr4 (11-92)||(33748245-33748326)
[»] scaffold0060 (1 HSPs)
scaffold0060 (11-85)||(60572-60646)


Alignment Details
Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 136 - 413
Target Start/End: Original strand, 50151317 - 50151595
Alignment:
Q  136 actctctctaatccttatcttccagatttttagagaggcaacagtaaagcctcatgagtttattattttaattattttcttaccattataataaacaaga 235  Q
    |||||||||| |||||||||| ||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50151317 actctctctattccttatctttcagattcc-agagaggcagcagtaaagcctcatgagtttattattttaattattttcttaccattataataaacaaga 50151415  T
Q  236 ttttaaaagtcatagagttgatgggttcgaatatcacgattttaaaagtctaacgttaattaatcaattagtaataaacaagattagataaaataatttt 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  50151416 ttttaaaagtcatagagttgatgggttcgaatatcacgattttaaaagtctaacgttaattaatcaaatagcaataaacaagattagataaaataatttt 50151515  T
Q  336 --tnnnnnnnctcatagaccgtgaaattttaattaccctctcaatactcacaacacaagtgacaaactcaaggttgtgct 413  Q
              |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50151516 aaaaaaaaaactcatagaccttgaaattttaattaccctctcaatactcacaacacaagtgacaaactcaaggttgtgct 50151595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 143 - 402
Target Start/End: Original strand, 43012784 - 43013040
Alignment:
Q  143 ctaatccttatcttccagatttttagagaggcaacagtaaagcctcatgagtttattattttaattattttcttaccattataataaacaagattttaaa 242  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||    
T  43012784 ctaatccttatcttccagattttcagagaggcaacaataaagcctcatgagtttattactttaattattttcttaccattataataaacaa--ttttaaa 43012881  T
Q  243 agtcatagagttgatgggttcgaatatcacgattttaaaagtctaacgttaattaatcaattagtaataaacaagattagataaaataattttt-nnnnn 341  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||          
T  43012882 agtca--gagttgatgggttcgaatatcacgattttaaaagtctaacgttaattaatcaaatagtaataaacaagattagataaaataatttttaaaaaa 43012979  T
Q  342 nnctcatagaccgtgaaattttaattaccctctcaatactcacaacacaagtgacaaactc 402  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43012980 aactcatagaccgtgaaattttaattaccctctcaatactcacaacacaagtgacaaactc 43013040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 11 - 148
Target Start/End: Original strand, 43011621 - 43011758
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtcattaaacgctaaattccg 110  Q
    |||||||  |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||| ||||||| |     
T  43011621 gaacctggaaaaatattggtctaagatggaccagttttttgtaccgttggatcatatgaacccaccaaaccttattatggtcattaaacactaaatttca 43011720  T
Q  111 cacatattatctatcactctcattgactctctctaatc 148  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  43011721 cacatattacctatcactctcattgactctctctaatc 43011758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 50150075 - 50150158
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtcat 94  Q
    ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||  |||||||||||||    
T  50150075 gaacctgtgaaaatattggtctaagatggaccagttttttgtaccgttagatcatatgaacccaccaaatcttattatggtcat 50150158  T

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Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 38863443 - 38863524
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||| | |||||||||||||| ||||||||| ||||||||| |||| ||||||||||| |||||||| ||||| ||||||    
T  38863443 gaacctataaaaatattggtctatgatggaccaattttttgtaccattagatcatatgaatccaccaaattttatcatggtc 38863524  T

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Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 37285479 - 37285551
Alignment:
Q  20 aaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||||||||| | ||||||||| ||||| |||||||| ||||||||||| |||||||| ||||| ||||||    
T  37285479 aaaatattggtccatgatggaccaatttttggtatcattagatcatatgaatccaccaaattttatcatggtc 37285551  T

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Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 26733506 - 26733421
Alignment:
Q  20 aaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtcattaaacgctaaat 106  Q
    |||||||||||||| ||||||||| ||||| ||| |||| ||| |||||||||||||||| ||||| ||||||  ||||| ||||||    
T  26733506 aaaatattggtctatgatggaccaattttt-gtaccattagattatatgaacccaccaaattttatcatggtctataaacactaaat 26733421  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 188
Target Start/End: Original strand, 14998517 - 14998694
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtcattaaacgctaaattccg 110  Q
    |||||| | |||||||||||| | ||||||||| ||||||||| | || |||||||| |||| || || ||| || ||| || |||||| | ||||        
T  14998517 gaacctataaaaatattggtccatgatggaccaattttttgtaccgttagatcatataaacctacaaatctt-atcatgatctttaaacaccaaatctaa 14998615  T
Q  111 cacatattatctatcactctcattgactctctctaatccttatcttccagatttttagagaggcaa-cagtaaagcctc 188  Q
    | ||| |  |||| ||||| |||| |||||||||| ||||||||||||||||||  | |||||||| ||||||| ||||    
T  14998616 cccatctagtctagcactcccatttactctctctattccttatcttccagatttccacagaggcaagcagtaaaacctc 14998694  T

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Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 47215506 - 47215570
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccac 75  Q
    |||||| | |||||||||||| | ||||||||| ||||||||| ||||  || ||||||||||||    
T  47215506 gaacctataaaaatattggtccatgatggaccaattttttgtaccattaaataatatgaacccac 47215570  T

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Target: chr3 (Bit Score: 139; Significance: 1e-72; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 11 - 213
Target Start/End: Original strand, 34020556 - 34020758
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtcattaaacgctaaattccg 110  Q
    |||| ||||||||||||||| ||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||  |||||| |     
T  34020556 gaacatgtgaaaatattggtttaaaatggaccagttttttgtaccattgaatcatatgaacccaccaaactttattatggtcattaaacattaaatttca 34020655  T
Q  111 cacatattatctatcactctcattgactctctctaatccttatcttccagatttttagagaggcaacagtaaagcctcatgagtttattattttaattat 210  Q
    ||||||| | |||||||||||||| |||||||||| ||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||    
T  34020656 cacatataacctatcactctcatttactctctctattccttatcttccagatttccagagaggcagcagtaaagcctcatgagtttattattttaattat 34020755  T
Q  211 ttt 213  Q
    |||    
T  34020756 ttt 34020758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 248 - 413
Target Start/End: Original strand, 34020758 - 34020924
Alignment:
Q  248 tagagttgatgggttcgaatatcacgattttaaaagtctaacgttaattaatcaattagtaataaacaagattagataaaataatt-tttnnnnnnnctc 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |         |||    
T  34020758 tagagttgatgggttcgaatatcacgattttaaaagtctaacgttaattaatcaaatagtaataaacaagattagataaaataattataaaaaaaaactc 34020857  T
Q  347 atagaccgtgaaattttaattaccctctcaatactcacaacacaagtgacaaactcaaggttgtgct 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34020858 atagaccgtgaaattttaattaccctctcaatactcacaacacaagtgacaaactcaaggttgtgct 34020924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 19647636 - 19647717
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||| | |||||||||||| | |||||||||  |||||||| |||| |||||||||||||||||||| ||||| ||||||    
T  19647636 gaacctataaaaatattggtccatgatggaccaaatttttgtaccattagatcatatgaacccaccaaattttatcatggtc 19647717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 7944234 - 7944315
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||| | |||||||||||  | ||||||||| ||||||||| |||| ||||||||||| |||||||| ||||| ||||||    
T  7944234 gaacctataaaaatattggttcatgatggaccaattttttgtaccattagatcatatgaatccaccaaattttatcatggtc 7944315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 14136492 - 14136358
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtcattaaacgctaaattccg 110  Q
    |||||| | |||||||||||||| ||||||||| ||||||||| |||| |||||||||||||||||||| ||||| ||||||  ||||| | ||||  |     
T  14136492 gaacctataaaaatattggtctatgatggaccaattttttgtaccattagatcatatgaacccaccaaattttatcatggtctataaacaccaaatctca 14136393  T
Q  111 cacatattatctatcactctcattgactctctcta 145  Q
    | ||| || ||||| ||||||||| | ||||||||    
T  14136392 cccattttctctataactctcatttaatctctcta 14136358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 11782254 - 11782173
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||| | |||||||||||| | ||||||||| ||||||||| | || |||||||||||||||||||| ||||| ||||||    
T  11782254 gaacctataaaaatattggtccatgatggaccaattttttgtaccgttagatcatatgaacccaccaaattttatcatggtc 11782173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 85
Target Start/End: Complemental strand, 1463825 - 1463751
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttat 85  Q
    |||||| | |||||||||||| | ||||||||| |||||  ||||||| |||||||||||||||||||| |||||    
T  1463825 gaacctataaaaatattggtccatgatggaccaatttttgatatcattagatcatatgaacccaccaaattttat 1463751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 27514296 - 27514216
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||| | |||||||||||| | ||||||||| ||||||||| ||| | ||||||||||||||||||| ||||| ||||||    
T  27514296 gaacctataaaaatattggtccatgatggaccaattttttgtaccatag-atcatatgaacccaccaaattttatcatggtc 27514216  T

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Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 40323474 - 40323402
Alignment:
Q  20 aaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||||||||||| ||||||||| ||||||||| |||| ||| |||||||| |||||||  |||| ||||||    
T  40323474 aaaatattggtctatgatggaccaattttttgtaccattagattatatgaactcaccaaatcttatcatggtc 40323402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 42146071 - 42146145
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttat 85  Q
    |||||| | |||||||||||| | ||||||||| ||||||||| |||| |||||||||||||||||||| |||||    
T  42146071 gaacctataaaaatattggtccatgatggaccaattttttgtaccattagatcatatgaacccaccaaattttat 42146145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 27562686 - 27562604
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagtttttt-gtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||| | |||||||||||||| ||||||| | |||||| ||| |||| |||||||||||||||||||| ||||| ||||||    
T  27562686 gaacctataaaaatattggtctatgatggactaatttttttgtaccattagatcatatgaacccaccaaattttatcatggtc 27562604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 31664909 - 31664775
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtcattaaacgctaaattccg 110  Q
    |||||| | |||||||||||| | |||||| || ||||||||| |||| |||||||||||| ||||||| ||||| ||||||  ||||| | ||||  |     
T  31664909 gaacctataaaaatattggtccatgatggaacaattttttgtaccattagatcatatgaactcaccaaattttatcatggtctataaacaccaaatctca 31664810  T
Q  111 cacatattatctatcactctcattgactctctcta 145  Q
    | ||| || ||||| ||||||||| | ||||||||    
T  31664809 cccatcttctctataactctcatttaatctctcta 31664775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 35176361 - 35176433
Alignment:
Q  20 aaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||||||||||| ||||||| | |||||| |  |||| ||| ||||||| |||||||| ||||| ||||||    
T  35176361 aaaatattggtctatgatggactaattttttatcccattagattatatgaatccaccaaattttatcatggtc 35176433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 18058406 - 18058540
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtcattaaacgctaaattccg 110  Q
    |||||| | |||||||||||| | ||||||||| ||||||||| |||| ||||||||||| |||||||| ||||| ||||||  ||||| | ||||| |     
T  18058406 gaacctataaaaatattggtccatgatggaccaattttttgtaccattagatcatatgaatccaccaaattttatcatggtctataaacaccaaatttca 18058505  T
Q  111 cacatattatctatcactctcattgactctctcta 145  Q
    | ||| || |||||  |||||||| | ||||||||    
T  18058506 cccatcttctctatatctctcatttaatctctcta 18058540  T

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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 145
Target Start/End: Complemental strand, 30452880 - 30452757
Alignment:
Q  22 aatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtcattaaacgctaaattccgcacatattatc 121  Q
    |||||||||||| ||||||||| ||||||||| |||| |||||||||||||||  ||| ||||| ||||||  ||||| | ||||| | | ||| || ||    
T  30452880 aatattggtctatgatggaccaattttttgtaccattagatcatatgaacccattaaattttatcatggtctataaacaccaaatttcacccatcttctc 30452781  T
Q  122 tatcactctcattgactctctcta 145  Q
    ||| ||| ||||| | ||||||||    
T  30452780 tataactttcatttaatctctcta 30452757  T

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Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 25049512 - 25049572
Alignment:
Q  19 gaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaa 79  Q
    |||||||||||| || ||||||||| |||||| || | |||||||||||||||||||||||    
T  25049512 gaaaatattggtttatgatggaccaattttttctaccgttggatcatatgaacccaccaaa 25049572  T

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Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 7000530 - 7000456
Alignment:
Q  18 tgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||||||||||||| ||||||||| ||||||||| |||| ||| ||||||| | |||||| ||||||||||||    
T  7000530 tgaaaatattggtctatgatggaccaattttttgtaccattagattatatgaatctaccaaattttattatggtc 7000456  T

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Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 42481219 - 42481290
Alignment:
Q  20 aaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||||||||| | ||||||||| |||||| || |||| ||||||||||| |||||||| ||||| ||||||    
T  42481219 aaaatattggtccatgatggaccaatttttt-taccattagatcatatgaatccaccaaattttatcatggtc 42481290  T

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Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 42062104 - 42062185
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||| | |||||||||||||| |||| || | ||||||||| |||| ||||||||||| |||||||| ||||||||||||    
T  42062104 gaacctataaaaatattggtctatgatgaactaattttttgtaccattagatcatatgaatccaccaaattttattatggtc 42062185  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 27923357 - 27923278
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggt 91  Q
    |||||| | |||||||||||  | ||||||||| ||||| ||| |||| ||||||| |||||||||||| ||||| |||||    
T  27923357 gaacctataaaaatattggttcatgatggaccaattttt-gtaccattagatcataagaacccaccaaattttatcatggt 27923278  T

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Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 42057988 - 42057908
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggt 91  Q
    |||||| | ||||||||||| || ||||||||| ||||||||| |||| ||||||| |||||||||||| ||||| |||||    
T  42057988 gaacctataaaaatattggtttatgatggaccaattttttgtaccattagatcataagaacccaccaaattttatcatggt 42057908  T

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Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 54453877 - 54453958
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||| | ||||||||||| || |||||| || ||||||||| |||| ||||||||||||||| |||| ||||| ||||||    
T  54453877 gaacctataaaaatattggtttatgatggatcaattttttgtaccattagatcatatgaacccatcaaattttatcatggtc 54453958  T

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Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 33748326 - 33748245
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttattatggtc 92  Q
    |||||| | |||||||||||  | ||||||||| ||||||||| |||| ||||||||||| ||| |||| ||||| ||||||    
T  33748326 gaacctataaaaatattggttcatgatggaccaattttttgtaccattagatcatatgaatccatcaaattttatcatggtc 33748245  T

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Target: scaffold0060 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 85
Target Start/End: Original strand, 60572 - 60646
Alignment:
Q  11 gaacctgtgaaaatattggtctaagatggaccagttttttgtatcattggatcatatgaacccaccaaactttat 85  Q
    |||||| | ||||||||  |||| ||||||||| ||||||||| |||| ||| |||||||||||||||| |||||    
T  60572 gaacctataaaaatattaatctatgatggaccaattttttgtaccattagattatatgaacccaccaaattttat 60646  T

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