View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19786_high_74 (Length: 277)
Name: NF19786_high_74
Description: NF19786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19786_high_74 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 11 - 277
Target Start/End: Original strand, 38632803 - 38633069
Alignment:
| Q |
11 |
aagaacaagtaccacaggttttttagtcattctgttctcctctttagtttgttgaaatattggctgtcataatcatgaacatgagaaaaaccctaaggta |
110 |
Q |
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| T |
38632803 |
aagaacaagtaccacaggttttttagtcattctgttctcctctttagtttgttgaaatattggctgtcataatcatgaacatgagaaaaaccctaaggta |
38632902 |
T |
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| Q |
111 |
tcttccatagacttatgatgtaagattcaaggaaatggaaaaagaacaatgttgaaataaataagggagaagctgaagaaaccaataaaagtgataaaat |
210 |
Q |
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| T |
38632903 |
tcttccatagacttatgatgtaagattcaaggaaatggaaaaagaacaatgttgaaataaataagggagaagctgaagaaaccaataaaagtgataaaat |
38633002 |
T |
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| Q |
211 |
ggggcaacctggtgcttacaaagtaaagtacagtgggaaacaaaatcaaaggaaccagaaaatgagt |
277 |
Q |
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| T |
38633003 |
ggggcaacctggtgcttacaaagtaaagtacagtgggaaacaaaatcaaaggaaccagaaaatgagt |
38633069 |
T |
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