View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19786_high_75 (Length: 276)
Name: NF19786_high_75
Description: NF19786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19786_high_75 |
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Alignment Details
Target: chr6 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 26611949 - 26612182
Alignment:
| Q |
22 |
atatatggcttgaattatcatcctaacattctacctagctcacatcaatataccacccctttacacaatcatctaaatccactcatacactcttgtataa |
121 |
Q |
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| T |
26611949 |
atatatagcttgaattatcatcctgacattctacct----cacatcaatataccacccctttacacaatcatctaaatccactcatacactcttgtataa |
26612044 |
T |
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| Q |
122 |
taataaccttgcatgcttcatatttcccgttcaaaaaatggacagtaacaacaatagaattacctatagattatttggtctnnnnnnnttacctataaat |
221 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |
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| T |
26612045 |
taataaccttgcatgcttcatatttcccgttcaaaaaatggacagtaacaacaatagaa-tacctatagattatttggtctaaaaaaattacctataaat |
26612143 |
T |
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| Q |
222 |
tactttcctctaaaaccatccaaaaccatcaccgatcat |
260 |
Q |
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||||||||||||||||||||||||||||||||| ||||| |
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| T |
26612144 |
tactttcctctaaaaccatccaaaaccatcaccaatcat |
26612182 |
T |
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