View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19786_high_86 (Length: 251)
Name: NF19786_high_86
Description: NF19786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19786_high_86 |
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Alignment Details
Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 17 - 237
Target Start/End: Original strand, 22551664 - 22551885
Alignment:
| Q |
17 |
agacaatgaggggaggattgtggtacgtattcccttgtatactaaattaaacaaccctccaaatttccaggtatgaataatcagaataataagactaaaa |
116 |
Q |
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| T |
22551664 |
agacaatgaggggaggattgtggtaagtattcccttgtatactaaattaaacaaccctccaaatttccaggtatgaataatcagaataataagactaaaa |
22551763 |
T |
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| Q |
117 |
-acaagtgcttccaattgcagaataaatttgcattaactacaaaagagatcactgccaattctcaattaatttttgcttcctattcctcagaatcattca |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
22551764 |
aacaagtgcttccaattgcagaataaatttgcattaactacaaaagagatcagtgccaattctcaattgatttttgcttcctattcctcagaatcattca |
22551863 |
T |
|
| Q |
216 |
agttgtgggaccacttattttt |
237 |
Q |
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|||||||||||||||||||||| |
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| T |
22551864 |
agttgtgggaccacttattttt |
22551885 |
T |
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