View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19786_high_89 (Length: 249)
Name: NF19786_high_89
Description: NF19786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19786_high_89 |
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Alignment Details
Target: chr8 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 1519512 - 1519681
Alignment:
| Q |
1 |
gacacatatcacatgctaaggtacccac----tattttgattattttgaatcactaggaaattattctaactcgaatgctcacttaaatgc-aagttttt |
95 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
1519512 |
gacacatatcacatgctaaggtacccacccaatattttgattattttgaatcactaggaaattattctaactcgaatgctcacttaaatgcgaagttttt |
1519611 |
T |
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| Q |
96 |
tcctcactcaattcgactatggtttatttgttaatctacacataagtatatctaattatgctgaagaggc |
165 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1519612 |
tcctcactcaattcgactatggtttaattgttaatctacacataagtatatctaattatgctgaagaggc |
1519681 |
T |
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