View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19786_high_92 (Length: 239)
Name: NF19786_high_92
Description: NF19786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19786_high_92 |
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Alignment Details
Target: chr6 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 33204176 - 33204397
Alignment:
| Q |
1 |
tcttatccttcacaataccacatttattttcttctccttataatcctttgatgttttctacctttgcatgtgatgcatgaatgtttgattagaatgtctc |
100 |
Q |
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| T |
33204176 |
tcttatccttcacaataccacatttattttcttctccttataaccctttgatgttttctacctttgcatgtgatgcatgaatgtttgattagaatgtctc |
33204275 |
T |
|
| Q |
101 |
tggagaaatcataattcatcaaaaccgcatgttcctagctgtttcttcatcttggacaaagcatgcatccttttcatttgtaaacatttaagaatattct |
200 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33204276 |
tggagcaatcataattcatcaaaaccgcatgttcctagctgtttcttgatcttggacaaagcatgcatccttttcatttgtaaacatttaagaatattct |
33204375 |
T |
|
| Q |
201 |
acagataaattatagtatcagg |
222 |
Q |
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|| ||||||||||||||||||| |
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| T |
33204376 |
acggataaattatagtatcagg |
33204397 |
T |
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