View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19786_low_104 (Length: 216)
Name: NF19786_low_104
Description: NF19786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19786_low_104 |
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Alignment Details
Target: chr1 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 6132576 - 6132773
Alignment:
| Q |
1 |
aaaaactagcaagaattatcaatccaaaagagaatgcaagagtttacccc-tcaaattttaaaagtgaaataaccacacaaattctcagagcttaaagga |
99 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| |
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| T |
6132576 |
aaaaactagcaagaattatcaatccaaaagagaatgcaagagtttaccccctcaaattttaaaagtgaaataaccacacaaattctcacaacttaaagga |
6132675 |
T |
|
| Q |
100 |
aagatgcacatatcatcaagctttatttttctgggccatatttgagacaggtgaggaggagtgaggacgactgtcctaagctctttaaaataagttta |
197 |
Q |
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||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |
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| T |
6132676 |
aagatgcacatatcatcaaactttatttttcagggccatatttgagacaggtgaggaggagtgaggacgactgtcctaggctgtttaaaataagttta |
6132773 |
T |
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