View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19786_low_2 (Length: 940)

Name: NF19786_low_2
Description: NF19786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19786_low_2
NF19786_low_2
[»] chr2 (3 HSPs)
chr2 (24-928)||(33077074-33077998)
chr2 (89-214)||(33068989-33069118)
chr2 (438-475)||(26227842-26227879)
[»] chr8 (2 HSPs)
chr8 (760-893)||(40818984-40819119)
chr8 (444-490)||(22721091-22721137)
[»] chr5 (2 HSPs)
chr5 (444-560)||(22553304-22553419)
chr5 (444-489)||(17344866-17344911)
[»] chr7 (4 HSPs)
chr7 (440-527)||(12168208-12168295)
chr7 (443-489)||(151796-151842)
chr7 (444-528)||(8231943-8232027)
chr7 (448-490)||(15826644-15826686)
[»] chr1 (3 HSPs)
chr1 (442-530)||(48955347-48955435)
chr1 (444-489)||(3368090-3368135)
chr1 (443-488)||(10884523-10884568)
[»] chr6 (5 HSPs)
chr6 (445-552)||(14283339-14283446)
chr6 (439-489)||(11182096-11182146)
chr6 (444-489)||(12404796-12404841)
chr6 (312-443)||(10744363-10744494)
chr6 (444-489)||(2637760-2637805)
[»] chr4 (6 HSPs)
chr4 (640-678)||(49360267-49360305)
chr4 (443-527)||(26253007-26253091)
chr4 (594-638)||(49360294-49360338)
chr4 (443-489)||(14043021-14043067)
chr4 (444-490)||(14044933-14044979)
chr4 (444-501)||(49360409-49360467)
[»] chr3 (4 HSPs)
chr3 (444-489)||(53359260-53359305)
chr3 (444-490)||(11422938-11422984)
chr3 (444-490)||(44893489-44893535)
chr3 (444-489)||(24398090-24398135)
[»] scaffold0103 (1 HSPs)
scaffold0103 (444-489)||(2204-2249)


Alignment Details
Target: chr2 (Bit Score: 685; Significance: 0; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 685; E-Value: 0
Query Start/End: Original strand, 24 - 928
Target Start/End: Original strand, 33077074 - 33077998
Alignment:
Q  24 tatataaattaggcatgctttattttgtttgctctataaaactaaaaactcgatgtg---ttatatagttgtttgatctacgtagctgattccaactctt 120  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    |||||| |||||||||||||||||||||||||||||||||    
T  33077074 tataaaaatttggcatgctttattttgtttgctctataaaactaaaaactcgatgttgtattatatcgttgtttgatctacgtagctgattccaactctt 33077173  T
Q  121 caatcgtaatttttagaatatttaatatacaacttttagtccactataattttagtgttttccaaacacatgtttagaatttaaatatccataaagttcc 220  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  33077174 caatcataatttttagaatatttaatatacaaattttagtccactgtaattttagtgttttccaaacacatgtttagcatttaaatatccataaagttcc 33077273  T
Q  221 ttcacagttgattgtttcaacattcaactctcctcacaaagttccttcacaattgagaaaccattggctccattgttaaatattgttaatgatttctctt 320  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  33077274 ttcagagttgattgtttcaacattcatctctcctcacaaagttccttcacaattgagaaaccattggctccattgttaaatattatcaatgatttctctt 33077373  T
Q  321 tgattgtgtctcctatcaacggggaagaaaatcattgtgcatacaagcttgttgattatacttttaatgtgtggggctttacttagtggaatgacattcc 420  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  33077374 tgattgtgtctcctatcaacggggaagaaaatcattgtgcatacaagcttcttgattatacttttaatgtgtggggctttacttagtggaatgacattct 33077473  T
Q  421 ttcttttgttagagatgacttttgaattctgctctttacccaacaaaaaatgctcgctctcaactgaaatatcgaaattacctcagcgtaagttaactca 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || | |||| | |||    
T  33077474 ttcttttgttagagatgacttttgaattctgctctttacccaacaaaaattgctcgctctcaactgaaatatcgaaattacctctgcatgagttgattca 33077573  T
Q  521 tgctagttatattttctgcgggacttaagtcatgctgcgtaa--cacatcacgctgctttctttttctatcagtcgtgttgcttttcaaccaaaggtcag 618  Q
    |||||||||| ||||||||  || |||| ||| ||||||| |   |  |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33077574 tgctagttatgttttctgcatgagttaactcacgctgcgtgatttaactcacgctgctttctttttctatcagtggtgttgcttttcaaccaaaggtcag 33077673  T
Q  619 ttgcgttgcttttcaatcttccttttcaatctttttgtcatatagtgaattaatggatgaatgctgtttgctgcaaggaatccttattttatgtccacga 718  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33077674 ttgcgttgcttttcaatcttccttttcaatctttttgtcatatagtgaattaatggatgaatgctgtttgctgcaaggaatccttattttatgtccacga 33077773  T
Q  719 tatttactgc--------cactactaatcatt-------aagtaattcattattttaacagataaactaactaatccgataaattgagccgcgttggcta 803  Q
    ||||||||||        || || |  || ||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33077774 tatttactgcaaggaattcattatttttccttaaaaaaaaagtaattcattattttaacagataaactaactaatccgataaattgagccgcgttggcta 33077873  T
Q  804 tgctaatctaatatttttataatctctgggacgtttctacgaccaatctatgctaaaacctgctttaatggaatctgaatcatatcattcctcttatgtc 903  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33077874 tgctaatctaatattttaataatctttgggacgtttctacgaccaatttatgctaaaacctgctttaatggaatctgaatcatatcattccacttatgtc 33077973  T
Q  904 ttccaagtctactactcttcttctc 928  Q
    |||||||||||||||||||||||||    
T  33077974 ttccaagtctactactcttcttctc 33077998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 89 - 214
Target Start/End: Original strand, 33068989 - 33069118
Alignment:
Q  89 ttgtttgatctacgtag----ctgattccaactcttcaatcgtaatttttagaatatttaatatacaacttttagtccactataattttagtgttttcca 184  Q
    |||||||||||||||||     |||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||    
T  33068989 ttgtttgatctacgtagatgattgattccatctcttcaatcgtaattttttgaatatttaatatataacttttagtccactataatattagtgttttcca 33069088  T
Q  185 aacacatgtttagaatttaaatatccataa 214  Q
    ||||||||||||| ||||||||||||||||    
T  33069089 aacacatgtttagcatttaaatatccataa 33069118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 438 - 475
Target Start/End: Complemental strand, 26227879 - 26227842
Alignment:
Q  438 acttttgaattctgctctttacccaacaaaaaatgctc 475  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  26227879 acttatgaatcctgctctttacccaacaaaaaatgctc 26227842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 1e-37; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 760 - 893
Target Start/End: Complemental strand, 40819119 - 40818984
Alignment:
Q  760 aacagataaactaactaatccgataaattgagccgcgttggctatgctaatctaatatttttataatctctgggacgtttctacgaccaatctat--gct 857  Q
    |||| ||||||||| | ||||||  ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||   ||    
T  40819119 aacacataaactaagtcatccgaacaattgagccgcgttggcaatgctaatctaatatttttataatctgtgggacgtttctacgaccaatctattgcct 40819020  T
Q  858 aaaacctgctttaatggaatctgaatcatatcattc 893  Q
    ||||| ||||||||||| || |||||||||||||||    
T  40819019 aaaacgtgctttaatgggatatgaatcatatcattc 40818984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 444 - 490
Target Start/End: Original strand, 22721091 - 22721137
Alignment:
Q  444 gaattctgctctttacccaacaaaaaatgctcgctctcaactgaaat 490  Q
    ||||| |||||||||||||||||||| ||||| ||| ||||||||||    
T  22721091 gaattatgctctttacccaacaaaaattgctccctcccaactgaaat 22721137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 2e-18; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 444 - 560
Target Start/End: Complemental strand, 22553419 - 22553304
Alignment:
Q  444 gaattctgctctttacccaacaaaaaatgctcgctctcaactgaaatatcgaaattacctcagcgtaagttaactcatgctagttatattttctgcggga 543  Q
    ||||||| |||||||||||||||||| ||| ||||| ||||||||||  ||||||| || | |||| |||||||||| ||||||||| || ||||||  |    
T  22553419 gaattctactctttacccaacaaaaattgcccgctcccaactgaaattccgaaattgcc-ctgcgtgagttaactcacgctagttatgttgtctgcgtaa 22553321  T
Q  544 cttaagtcatgctgcgt 560  Q
    ||||||||| |||||||    
T  22553320 cttaagtcacgctgcgt 22553304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 489
Target Start/End: Complemental strand, 17344911 - 17344866
Alignment:
Q  444 gaattctgctctttacccaacaaaaaatgctcgctctcaactgaaa 489  Q
    ||||| |||||||||||||| ||||| ||||||||| |||||||||    
T  17344911 gaattatgctctttacccaataaaaattgctcgctcccaactgaaa 17344866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 440 - 527
Target Start/End: Original strand, 12168208 - 12168295
Alignment:
Q  440 ttttgaattctgctctttacccaacaaaaaatgctcgctctcaactgaaatatcgaaattacctcagcgtaagttaactcatgctagt 527  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||||||    |||| |||||| ||  | ||||||||||||||||    
T  12168208 ttttgaattctgctctttacccaacaacaattgctcgctcccaactgaaaagatgaaaatacctctgcacatgttaactcatgctagt 12168295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 443 - 489
Target Start/End: Complemental strand, 151842 - 151796
Alignment:
Q  443 tgaattctgctctttacccaacaaaaaatgctcgctctcaactgaaa 489  Q
    ||||||||||||||||||||||||||| |||||||| |||| |||||    
T  151842 tgaattctgctctttacccaacaaaaattgctcgctttcaattgaaa 151796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 444 - 528
Target Start/End: Complemental strand, 8232027 - 8231943
Alignment:
Q  444 gaattctgctctttacccaacaaaaaatgctcgctctcaactgaaatatcgaaattacctcagcgtaagttaactcatgctagtt 528  Q
    |||||||||||||||||||||| ||| ||| ||| | ||||||||||  ||||||| |  | |||| |||||||||| |||||||    
T  8232027 gaattctgctctttacccaacagaaattgcccgcccccaactgaaattccgaaattgcacctgcgtgagttaactcacgctagtt 8231943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 448 - 490
Target Start/End: Complemental strand, 15826686 - 15826644
Alignment:
Q  448 tctgctctttacccaacaaaaaatgctcgctctcaactgaaat 490  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||    
T  15826686 tctgctctttacccaacagaaattgctcgctcccaactgaaat 15826644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000002; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 442 - 530
Target Start/End: Original strand, 48955347 - 48955435
Alignment:
Q  442 ttgaattctgctctttacccaacaaaaaatgctcgctctcaactgaaatatcgaaattacctcagcgtaagttaactcatgctagttat 530  Q
    |||||||||||||||||||||||| ||| |||||||||  |||||||||   |||| | || | |||| |||||||||| |||||||||    
T  48955347 ttgaattctgctctttacccaacagaaattgctcgctcctaactgaaattctgaaactgcccctgcgtgagttaactcacgctagttat 48955435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 3368090 - 3368135
Alignment:
Q  444 gaattctgctctttacccaacaaaaaatgctcgctctcaactgaaa 489  Q
    ||||| |||||||||||||||| ||| ||||||||| |||||||||    
T  3368090 gaattatgctctttacccaacagaaattgctcgctcccaactgaaa 3368135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 488
Target Start/End: Complemental strand, 10884568 - 10884523
Alignment:
Q  443 tgaattctgctctttacccaacaaaaaatgctcgctctcaactgaa 488  Q
    ||||||||||||||||||||| ||||| |||||  |||||||||||    
T  10884568 tgaattctgctctttacccaaaaaaaattgctcattctcaactgaa 10884523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000009; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 445 - 552
Target Start/End: Original strand, 14283339 - 14283446
Alignment:
Q  445 aattctgctctttacccaacaaaaaatgctcgctctcaactgaaatatcgaaattacctcagcgtaagttaactcatgctagttatattttctgcgggac 544  Q
    ||||||||||||||| ||||| ||| ||||||||| |||||||||   | | |||||| | |||| |||||||||| ||||||| | ||||||||  ||     
T  14283339 aattctgctctttactcaacagaaattgctcgctcccaactgaaaagaccatattacccctgcgtgagttaactcacgctagttgtgttttctgcatgag 14283438  T
Q  545 ttaagtca 552  Q
    ||||||||    
T  14283439 ttaagtca 14283446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 489
Target Start/End: Complemental strand, 11182146 - 11182096
Alignment:
Q  439 cttttgaattctgctctttacccaacaaaaaatgctcgctctcaactgaaa 489  Q
    |||||||||| |||||||||||||||||||| || |||||| |||||||||    
T  11182146 cttttgaattatgctctttacccaacaaaaattgttcgctcccaactgaaa 11182096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 12404796 - 12404841
Alignment:
Q  444 gaattctgctctttacccaacaaaaaatgctcgctctcaactgaaa 489  Q
    |||||||||||||||||||||||||| ||||||||| |||| ||||    
T  12404796 gaattctgctctttacccaacaaaaattgctcgctcccaacagaaa 12404841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 443
Target Start/End: Complemental strand, 10744494 - 10744363
Alignment:
Q  312 atttctctttgattgtgtctcctatcaacggggaagaaaatcattgtgcatacaagcttgttgattatacttttaatgtgtggggctttacttagtggaa 411  Q
    |||||||||| |||||||||| |||| |   ||||| || |||||||||  | |||||||| || |||||||||   |||   | | || || |||||||    
T  10744494 atttctcttttattgtgtctcatatctattaggaaggaactcattgtgcggataagcttgtagactatacttttcgagtgcaagtcattgctcagtggaa 10744395  T
Q  412 tgacattccttcttttgttagagatgactttt 443  Q
    |||||||||||||||| ||| |||||||||||    
T  10744394 tgacattccttcttttattaaagatgactttt 10744363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 489
Target Start/End: Complemental strand, 2637805 - 2637760
Alignment:
Q  444 gaattctgctctttacccaacaaaaaatgctcgctctcaactgaaa 489  Q
    ||||||||||| |||||||||||||| ||||||||| ||| |||||    
T  2637805 gaattctgctccttacccaacaaaaattgctcgctcccaattgaaa 2637760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000003; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 640 - 678
Target Start/End: Complemental strand, 49360305 - 49360267
Alignment:
Q  640 cttttcaatctttttgtcatatagtgaattaatggatga 678  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  49360305 cttttcaatctttttgtcatatagtgaattaatagatga 49360267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 527
Target Start/End: Complemental strand, 26253091 - 26253007
Alignment:
Q  443 tgaattctgctctttacccaacaaaaaatgctcgctctcaactgaaatatcgaaattacctcagcgtaagttaactcatgctagt 527  Q
    |||||||||||||||| |||||| ||| ||||||||| ||||||||||  | | | || ||| |||| |||||||||| ||||||    
T  26253091 tgaattctgctctttatccaacagaaattgctcgctcccaactgaaatgacaataatatctctgcgtgagttaactcacgctagt 26253007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 594 - 638
Target Start/End: Complemental strand, 49360338 - 49360294
Alignment:
Q  594 gtgttgcttttcaaccaaaggtcagttgcgttgcttttcaatctt 638  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||    
T  49360338 gtgttgcttttcaaccaaagaccagttgcattgcttttcaatctt 49360294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 443 - 489
Target Start/End: Original strand, 14043021 - 14043067
Alignment:
Q  443 tgaattctgctctttacccaacaaaaaatgctcgctctcaactgaaa 489  Q
    |||||||||||||||| |||||| ||| ||||||||| |||||||||    
T  14043021 tgaattctgctctttatccaacagaaattgctcgctcccaactgaaa 14043067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 444 - 490
Target Start/End: Complemental strand, 14044979 - 14044933
Alignment:
Q  444 gaattctgctctttacccaacaaaaaatgctcgctctcaactgaaat 490  Q
    |||||||| |||||||| || ||||||||||||||| ||||||||||    
T  14044979 gaattctgttctttaccaaataaaaaatgctcgctcccaactgaaat 14044933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 444 - 501
Target Start/End: Complemental strand, 49360467 - 49360409
Alignment:
Q  444 gaattctgctctttacccaacaaaaaat-gctcgctctcaactgaaatatcgaaattac 501  Q
    |||| ||||||||||| ||||||| ||| |||||||| ||||||||||| |||||||||    
T  49360467 gaatactgctctttacacaacaaataattgctcgctcccaactgaaataccgaaattac 49360409  T

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Target: chr3 (Bit Score: 34; Significance: 0.000000001; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 444 - 489
Target Start/End: Complemental strand, 53359305 - 53359260
Alignment:
Q  444 gaattctgctctttacccaacaaaaaatgctcgctctcaactgaaa 489  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||    
T  53359305 gaattctgctttttacccaacaaaaattgctcgctcccaactgaaa 53359260  T

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Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 444 - 490
Target Start/End: Original strand, 11422938 - 11422984
Alignment:
Q  444 gaattctgctctttacccaacaaaaaatgctcgctctcaactgaaat 490  Q
    |||||||||||||||| ||||||||| |||||| || ||||||||||    
T  11422938 gaattctgctctttactcaacaaaaattgctcgttcccaactgaaat 11422984  T

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Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 444 - 490
Target Start/End: Original strand, 44893489 - 44893535
Alignment:
Q  444 gaattctgctctttacccaacaaaaaatgctcgctctcaactgaaat 490  Q
    |||||||| |||||||||||| |||| |||||| |||||||||||||    
T  44893489 gaattctgttctttacccaaccaaaattgctcgttctcaactgaaat 44893535  T

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Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 24398090 - 24398135
Alignment:
Q  444 gaattctgctctttacccaacaaaaaatgctcgctctcaactgaaa 489  Q
    ||||| |||||||||||||||| ||| ||||||||| |||||||||    
T  24398090 gaattatgctctttacccaacataaattgctcgctcccaactgaaa 24398135  T

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Target: scaffold0103 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 444 - 489
Target Start/End: Original strand, 2204 - 2249
Alignment:
Q  444 gaattctgctctttacccaacaaaaaatgctcgctctcaactgaaa 489  Q
    ||||||||||| |||||||||||||| ||||||||| ||| |||||    
T  2204 gaattctgctccttacccaacaaaaattgctcgctcccaattgaaa 2249  T

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