View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19786_low_28 (Length: 538)

Name: NF19786_low_28
Description: NF19786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19786_low_28
NF19786_low_28
[»] chr1 (45 HSPs)
chr1 (7-531)||(7743010-7743534)
chr1 (141-259)||(31794222-31794340)
chr1 (140-259)||(16893393-16893512)
chr1 (141-259)||(6122794-6122912)
chr1 (141-239)||(12259260-12259358)
chr1 (141-259)||(21547438-21547556)
chr1 (141-252)||(51814494-51814605)
chr1 (141-259)||(25297772-25297890)
chr1 (143-216)||(33700774-33700847)
chr1 (141-216)||(8904414-8904489)
chr1 (137-212)||(9165200-9165275)
chr1 (140-255)||(44961764-44961879)
chr1 (152-259)||(52336732-52336839)
chr1 (141-259)||(4566548-4566665)
chr1 (141-259)||(6650595-6650713)
chr1 (165-259)||(12587294-12587387)
chr1 (140-258)||(17745216-17745333)
chr1 (141-259)||(40257399-40257517)
chr1 (144-233)||(15786304-15786393)
chr1 (139-259)||(10526821-10526941)
chr1 (141-233)||(36371470-36371562)
chr1 (140-255)||(50901580-50901695)
chr1 (141-216)||(8177183-8177258)
chr1 (141-216)||(16169979-16170054)
chr1 (141-216)||(19528328-19528403)
chr1 (140-255)||(52116743-52116858)
chr1 (141-259)||(952511-952629)
chr1 (142-256)||(44126396-44126510)
chr1 (183-259)||(7219876-7219952)
chr1 (174-258)||(9879471-9879555)
chr1 (144-220)||(9964441-9964517)
chr1 (148-216)||(17410238-17410306)
chr1 (176-259)||(1600250-1600333)
chr1 (141-216)||(2799862-2799937)
chr1 (180-259)||(31383756-31383835)
chr1 (148-255)||(42983336-42983443)
chr1 (140-259)||(48619167-48619286)
chr1 (141-259)||(21267951-21268069)
chr1 (194-259)||(2220025-2220090)
chr1 (139-259)||(1094523-1094643)
chr1 (200-244)||(8254854-8254898)
chr1 (139-259)||(14787294-14787414)
chr1 (183-255)||(15065007-15065079)
chr1 (227-259)||(28180845-28180877)
chr1 (140-216)||(51703778-51703854)
[»] chr3 (44 HSPs)
chr3 (288-442)||(40864778-40864932)
chr3 (135-259)||(10499067-10499191)
chr3 (446-529)||(40864552-40864635)
chr3 (148-259)||(2667869-2667980)
chr3 (7-77)||(40864990-40865060)
chr3 (140-242)||(14186647-14186748)
chr3 (179-259)||(49397499-49397579)
chr3 (140-259)||(14339609-14339728)
chr3 (140-259)||(51903836-51903955)
chr3 (141-259)||(11642167-11642285)
chr3 (141-255)||(36720381-36720495)
chr3 (141-238)||(4222141-4222238)
chr3 (139-259)||(10445097-10445218)
chr3 (139-216)||(49494147-49494224)
chr3 (174-259)||(52769941-52770026)
chr3 (148-256)||(4844472-4844580)
chr3 (148-256)||(4870168-4870276)
chr3 (141-220)||(203090-203169)
chr3 (141-255)||(2597181-2597296)
chr3 (148-259)||(8075085-8075196)
chr3 (140-259)||(8170671-8170790)
chr3 (140-255)||(16991541-16991656)
chr3 (141-216)||(27093362-27093437)
chr3 (141-216)||(30311306-30311381)
chr3 (141-259)||(31520563-31520681)
chr3 (141-243)||(31788945-31789046)
chr3 (141-259)||(46518628-46518746)
chr3 (142-259)||(47454575-47454692)
chr3 (194-259)||(54990755-54990820)
chr3 (140-216)||(28703405-28703481)
chr3 (180-252)||(33899653-33899725)
chr3 (144-259)||(13808843-13808958)
chr3 (141-220)||(15048058-15048137)
chr3 (141-216)||(37788466-37788541)
chr3 (174-257)||(44743815-44743898)
chr3 (140-259)||(12761511-12761630)
chr3 (141-216)||(16354893-16354968)
chr3 (149-215)||(11612307-11612373)
chr3 (139-168)||(8796141-8796170)
chr3 (182-259)||(44069799-44069876)
chr3 (135-259)||(7673263-7673387)
chr3 (207-259)||(7973622-7973674)
chr3 (140-216)||(35111179-35111255)
chr3 (203-259)||(36015510-36015566)
[»] chr7 (43 HSPs)
chr7 (141-255)||(45709670-45709784)
chr7 (146-259)||(41519223-41519335)
chr7 (140-259)||(15137552-15137671)
chr7 (141-258)||(20335790-20335907)
chr7 (139-255)||(24513795-24513911)
chr7 (141-259)||(30579335-30579453)
chr7 (140-216)||(26459411-26459487)
chr7 (141-259)||(41487362-41487477)
chr7 (140-259)||(43590906-43591025)
chr7 (140-255)||(48771937-48772052)
chr7 (141-259)||(2446308-2446426)
chr7 (141-259)||(25590611-25590729)
chr7 (139-216)||(18363694-18363771)
chr7 (140-216)||(22760862-22760938)
chr7 (139-255)||(41519072-41519188)
chr7 (180-259)||(9183149-9183228)
chr7 (144-259)||(15905632-15905746)
chr7 (141-216)||(23552118-23552193)
chr7 (140-259)||(30442487-30442604)
chr7 (145-252)||(42711962-42712069)
chr7 (139-210)||(42836008-42836079)
chr7 (141-259)||(17040970-17041088)
chr7 (142-255)||(35513467-35513580)
chr7 (139-216)||(39631842-39631919)
chr7 (140-244)||(7801179-7801283)
chr7 (142-189)||(22927477-22927524)
chr7 (141-216)||(23301603-23301678)
chr7 (141-216)||(43215184-43215259)
chr7 (144-259)||(43663053-43663168)
chr7 (181-259)||(7309396-7309473)
chr7 (182-259)||(2882991-2883067)
chr7 (194-259)||(21558181-21558246)
chr7 (179-259)||(27313692-27313772)
chr7 (148-216)||(37085550-37085618)
chr7 (140-207)||(25021345-25021412)
chr7 (141-216)||(25655229-25655304)
chr7 (141-216)||(35119383-35119458)
chr7 (200-259)||(37473673-37473732)
chr7 (200-258)||(4572256-4572314)
chr7 (143-209)||(21854550-21854616)
chr7 (143-259)||(29385701-29385817)
chr7 (143-255)||(44628146-44628257)
chr7 (140-168)||(45559199-45559227)
[»] scaffold0258 (1 HSPs)
scaffold0258 (141-259)||(15281-15399)
[»] chr5 (31 HSPs)
chr5 (141-259)||(16773807-16773925)
chr5 (140-259)||(29075780-29075899)
chr5 (140-259)||(6844728-6844847)
chr5 (141-259)||(22737082-22737200)
chr5 (139-256)||(17028225-17028342)
chr5 (140-233)||(25627056-25627149)
chr5 (135-259)||(3252247-3252371)
chr5 (140-256)||(14495766-14495882)
chr5 (140-259)||(8278233-8278352)
chr5 (141-259)||(22020820-22020938)
chr5 (182-255)||(29173531-29173604)
chr5 (141-259)||(21589288-21589406)
chr5 (141-216)||(87424-87499)
chr5 (148-259)||(1410619-1410728)
chr5 (145-244)||(43241655-43241754)
chr5 (180-259)||(43442235-43442314)
chr5 (194-259)||(24907542-24907607)
chr5 (144-216)||(18437088-18437160)
chr5 (140-212)||(19043457-19043529)
chr5 (141-216)||(14285161-14285236)
chr5 (145-216)||(16436622-16436692)
chr5 (141-258)||(18169793-18169905)
chr5 (141-216)||(21549138-21549213)
chr5 (141-216)||(26078052-26078127)
chr5 (141-212)||(30883203-30883274)
chr5 (141-216)||(34984806-34984881)
chr5 (200-258)||(35705045-35705103)
chr5 (139-168)||(7918518-7918547)
chr5 (141-216)||(5390853-5390926)
chr5 (203-259)||(10054109-10054165)
chr5 (144-216)||(14804671-14804743)
[»] chr8 (30 HSPs)
chr8 (141-255)||(968362-968476)
chr8 (140-249)||(23361617-23361726)
chr8 (141-259)||(16852340-16852458)
chr8 (141-259)||(44780072-44780190)
chr8 (138-259)||(3624577-3624697)
chr8 (140-259)||(11819775-11819894)
chr8 (143-259)||(2203494-2203610)
chr8 (141-216)||(19703488-19703563)
chr8 (141-255)||(20994419-20994534)
chr8 (141-259)||(8059632-8059750)
chr8 (141-259)||(8484999-8485117)
chr8 (141-259)||(18540298-18540416)
chr8 (141-259)||(28783060-28783178)
chr8 (141-259)||(29431011-29431129)
chr8 (142-259)||(29858007-29858124)
chr8 (141-259)||(4830487-4830605)
chr8 (139-216)||(27750728-27750805)
chr8 (141-233)||(6569755-6569847)
chr8 (152-244)||(35690037-35690129)
chr8 (141-216)||(3826778-3826853)
chr8 (140-259)||(11518835-11518954)
chr8 (141-212)||(30483889-30483960)
chr8 (141-216)||(35641902-35641977)
chr8 (182-256)||(6536561-6536635)
chr8 (225-259)||(7347921-7347955)
chr8 (139-213)||(23874386-23874460)
chr8 (148-234)||(42740501-42740587)
chr8 (141-258)||(3058009-3058125)
chr8 (174-259)||(3305146-3305231)
chr8 (179-259)||(16843753-16843832)
[»] chr6 (15 HSPs)
chr6 (141-255)||(33549104-33549218)
chr6 (142-259)||(6758380-6758497)
chr6 (140-256)||(12633008-12633124)
chr6 (141-255)||(12234469-12234583)
chr6 (141-259)||(21418470-21418588)
chr6 (141-259)||(31622949-31623067)
chr6 (140-259)||(1056643-1056762)
chr6 (141-216)||(12188304-12188379)
chr6 (141-260)||(14557962-14558080)
chr6 (140-259)||(30127399-30127518)
chr6 (140-216)||(11423565-11423641)
chr6 (140-255)||(3715451-3715566)
chr6 (152-259)||(28363948-28364055)
chr6 (143-257)||(32613100-32613214)
chr6 (200-244)||(12216803-12216847)
[»] chr4 (37 HSPs)
chr4 (141-259)||(7949412-7949530)
chr4 (139-259)||(28635694-28635814)
chr4 (148-259)||(49576852-49576963)
chr4 (141-255)||(21660106-21660220)
chr4 (141-255)||(21668870-21668984)
chr4 (140-216)||(37109352-37109428)
chr4 (141-216)||(19680789-19680864)
chr4 (141-259)||(8030162-8030280)
chr4 (161-259)||(51954134-51954232)
chr4 (140-216)||(19238578-19238654)
chr4 (139-255)||(31826607-31826723)
chr4 (140-259)||(37274417-37274537)
chr4 (139-259)||(46545709-46545829)
chr4 (141-260)||(37720171-37720290)
chr4 (141-255)||(18404845-18404959)
chr4 (141-255)||(51250484-51250598)
chr4 (139-216)||(47044715-47044792)
chr4 (140-252)||(9936926-9937038)
chr4 (140-216)||(31759659-31759735)
chr4 (140-259)||(45060977-45061096)
chr4 (141-252)||(55427165-55427276)
chr4 (141-216)||(2622396-2622475)
chr4 (158-252)||(13015444-13015538)
chr4 (140-255)||(37443701-37443813)
chr4 (141-189)||(27965538-27965586)
chr4 (156-216)||(38869783-38869843)
chr4 (141-216)||(4249177-4249252)
chr4 (139-214)||(9241028-9241103)
chr4 (141-216)||(39509070-39509145)
chr4 (145-259)||(13901746-13901860)
chr4 (174-220)||(24124052-24124098)
chr4 (145-259)||(24234649-24234762)
chr4 (200-258)||(47386750-47386808)
chr4 (203-256)||(30584783-30584836)
chr4 (158-259)||(30938177-30938278)
chr4 (144-216)||(7292799-7292871)
chr4 (164-220)||(42644907-42644963)
[»] scaffold0118 (1 HSPs)
scaffold0118 (140-259)||(41591-41710)
[»] chr2 (43 HSPs)
chr2 (141-259)||(29503271-29503388)
chr2 (141-255)||(42327357-42327471)
chr2 (141-259)||(1435064-1435181)
chr2 (141-259)||(42602554-42602672)
chr2 (141-259)||(11251087-11251205)
chr2 (141-259)||(37480075-37480193)
chr2 (139-216)||(4438980-4439057)
chr2 (141-216)||(14500277-14500352)
chr2 (140-255)||(28846690-28846805)
chr2 (141-216)||(34041589-34041664)
chr2 (141-216)||(39714992-39715067)
chr2 (145-255)||(3001383-3001493)
chr2 (174-259)||(25637184-25637269)
chr2 (194-259)||(38854420-38854485)
chr2 (141-205)||(1729816-1729880)
chr2 (140-216)||(23052524-23052600)
chr2 (183-259)||(33582015-33582091)
chr2 (140-216)||(40416391-40416467)
chr2 (141-259)||(7798994-7799111)
chr2 (142-216)||(16918579-16918653)
chr2 (141-255)||(21195638-21195752)
chr2 (141-251)||(26545840-26545950)
chr2 (141-259)||(29197334-29197452)
chr2 (139-216)||(11062358-11062435)
chr2 (141-254)||(19244109-19244222)
chr2 (194-259)||(38856120-38856185)
chr2 (132-216)||(5147680-5147764)
chr2 (202-258)||(31573600-31573656)
chr2 (183-259)||(35203341-35203417)
chr2 (141-216)||(42922414-42922490)
chr2 (141-220)||(11738041-11738120)
chr2 (141-244)||(35916086-35916189)
chr2 (139-233)||(13803493-13803587)
chr2 (149-259)||(21213777-21213887)
chr2 (194-259)||(2311777-2311842)
chr2 (148-240)||(9776313-9776403)
chr2 (139-216)||(12994377-12994454)
chr2 (139-216)||(32687479-32687556)
chr2 (142-259)||(37755929-37756046)
chr2 (202-259)||(37971956-37972013)
chr2 (182-259)||(41908596-41908673)
chr2 (139-167)||(16381704-16381732)
chr2 (141-216)||(33569859-33569935)
[»] scaffold0211 (1 HSPs)
scaffold0211 (141-256)||(24053-24168)
[»] scaffold0032 (1 HSPs)
scaffold0032 (141-255)||(112282-112396)
[»] scaffold0194 (1 HSPs)
scaffold0194 (145-242)||(13021-13118)
[»] scaffold0122 (1 HSPs)
scaffold0122 (148-259)||(6880-6988)
[»] scaffold0002 (1 HSPs)
scaffold0002 (144-220)||(94968-95044)
[»] scaffold0070 (1 HSPs)
scaffold0070 (141-259)||(42479-42596)
[»] scaffold0299 (1 HSPs)
scaffold0299 (147-216)||(11534-11603)
[»] scaffold0115 (1 HSPs)
scaffold0115 (194-259)||(42622-42687)
[»] scaffold0471 (1 HSPs)
scaffold0471 (174-220)||(8639-8685)
[»] scaffold0126 (1 HSPs)
scaffold0126 (158-259)||(25305-25406)


Alignment Details
Target: chr1 (Bit Score: 437; Significance: 0; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 7 - 531
Target Start/End: Complemental strand, 7743534 - 7743010
Alignment:
Q  7 tctctcattggaacaagagttatttgtcgtccaaatatattgcgaagacctttgcaagcctgaaacacatgtnnnnnnnngttgacaattctatcatatg 106  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||        |||||||||| |||||||||    
T  7743534 tctcttattggaacaagagttatttgtcgtccaa-tatattgcgaagacctttgcaagcctgaaacacatgtaaaaaaaagttgacaattttatcatatg 7743436  T
Q  107 atgtatgtgtgataaacaacaatagatatttcataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctc 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  7743435 atgtatgtgtgataaacaacaatagatatttcataacccacttgggttggcctagtggtattaactaggaatttgggagtgtggtcctcctctaggtctc 7743336  T
Q  207 aggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaacnnnnnnn-cagtagatatttgacacaatacaatacctctctaacat 305  Q
    | |||||||||||||  |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  7743335 aagttcgattatctaaaatgtcaatttaggtgggctaacttagcttcttcaaacaaaaaaaacagtagatatttgacacaatacaatacctctctaacat 7743236  T
Q  306 gagcttctttatctgcttcgacatatatatagtttttgagatgatcaagagcaatagctgatctgatttgcaagtctgaccccttgtttatgtacttttg 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7743235 gagcttctttatctgcttcgacatatatatagtttttgagatgatcaagagcaatagctgatctgatttgcaagtctgaccccttgtttatgtacttttg 7743136  T
Q  406 catgaggcaaacagcggattcacgctcacggccaatcacacatttgaccatccagagctttgggtctctaacagatggcaaaagtgattgttgttctaca 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7743135 catgaggcaaacagcggattcacgctcacggccaatcacacatttgaccatccagagctttgggtctctaacagatggcaaaagtgattgttgttctaca 7743036  T
Q  506 tctgtagtttcttcatcatattcttc 531  Q
    ||||||||||||||||||||||||||    
T  7743035 tctgtagtttcttcatcatattcttc 7743010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 31794340 - 31794222
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||||||||||||  || |||| ||||||||||| || ||||| ||||||   ||||||||  ||  | ||||||||| ||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctagagttcgattccctctggtgtcaatttgggtggg 31794241  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  31794240 ctaatttagcttcttcaaa 31794222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 16893393 - 16893512
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||||||||| |||  |||||||  || | |||||||||||||  || ||||| ||||||||||||||||| |||  | |||||||||  ||||    
T  16893393 taacccacttgggttgacctgttggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtgg 16893492  T
Q  240 gctaacttagcttcttcaaa 259  Q
    ||||| ||||||||||||||    
T  16893493 gctaatttagcttcttcaaa 16893512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 6122794 - 6122912
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||| |||||||| |||||||||||   || |||| ||||||||||| || ||||| |||||||||||||||||  ||    ||||||||| ||||||    
T  6122794 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtggg 6122893  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  6122894 ctaatttagcttcttcaaa 6122912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 12259260 - 12259358
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||| || ||||| | |||||| |||||||| ||   ||||||||||| |||||    
T  12259260 aacccacttgggttggcatagtgatattaacttgggatttgggagtgtgctcctcctcgaagtctcaagttcgattctcaccgatgtcaatttgggtgg 12259358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 21547556 - 21547438
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||| |||||||||||||||||||||||  || ||||  |||||| ||| || ||||| |||| |||||||||||| |||  |||| |||||||||||||    
T  21547556 aaccgacttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaatttaggtggg 21547457  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||  ||| ||||||||||    
T  21547456 ctagtttaacttcttcaaa 21547438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 141 - 252
Target Start/End: Original strand, 51814494 - 51814605
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||||||  ||||||| ||| | ||| || ||||||| || ||||| ||||||||||||||||| |||  | || |||||| ||||||    
T  51814494 aacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtggg 51814593  T
Q  241 ctaacttagctt 252  Q
    |||| |||||||    
T  51814594 ctaatttagctt 51814605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 25297772 - 25297890
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||| ||||||||||| |||  |||| || ||||||| || ||||| |||||| ||||| |||| ||   |  |||||||||||||||    
T  25297772 aacccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggtctgaggtttgattctcaccggcgtcaatttaggtggg 25297871  T
Q  241 ctaacttagcttcttcaaa 259  Q
     ||| ||||||||||||||    
T  25297872 ataatttagcttcttcaaa 25297890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 33700847 - 33700774
Alignment:
Q  143 cccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||||  || || || |||||||||| || ||||| |||||||||||||||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgatt 33700774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 8904414 - 8904489
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||||||||| ||||| ||| ||||| || ||||||| || ||||| |||||||| ||||||||    
T  8904414 aacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgatt 8904489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 9165275 - 9165200
Alignment:
Q  137 tcataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttc 212  Q
    ||||||||||||||||||||||||||||||||  || ||||  |||||||||| || ||||| | |||||||||||    
T  9165275 tcataacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttc 9165200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 44961764 - 44961879
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||||||||||||| |  ||||||||| || | |||||  ||||||| || |||||  |||||||||||||||| |||    ||||||||| |||||    
T  44961764 taacccacttgggttggtcaggtggtattagcttgagatttaagagtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaatttgggtgg 44961863  T
Q  240 gctaacttagcttctt 255  Q
    ||||| ||||||||||    
T  44961864 gctaatttagcttctt 44961879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 259
Target Start/End: Complemental strand, 52336839 - 52336732
Alignment:
Q  152 gttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagct 251  Q
    |||||||||||||||||  || ||||| |||||||||| || ||||  || ||||||||||||||||||  | ||||||||| | |||||||| |||  |    
T  52336839 gttggcctagtggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctggtgtcaatttggatgggctaatttaatt 52336740  T
Q  252 tcttcaaa 259  Q
    ||||||||    
T  52336739 tcttcaaa 52336732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 4566548 - 4566665
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||||||| ||||  || || |  |||||||||| || |||||  |||||||||||||||| |||  |||||||||||| | |||    
T  4566548 aacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctctgatgtcaatttaag-ggg 4566646  T
Q  241 ctaacttagcttcttcaaa 259  Q
     ||  ||||||||||||||    
T  4566647 ttagtttagcttcttcaaa 4566665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 6650595 - 6650713
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||| || ||||||||||||||||||  || |||||  |||||| || || ||||| | ||||||||||||||| |||  | |||||||||||||||     
T  6650595 aacccaattaggttggcctagtggtattggcttgggatcggggagtatgctcctcctcaatgtctcaggttcgattctctctggtgtcaatttaggtgga 6650694  T
Q  241 ctaacttagcttcttcaaa 259  Q
     ||  ||||||||||||||    
T  6650695 ttagtttagcttcttcaaa 6650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 12587294 - 12587387
Alignment:
Q  165 tattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||| ||| ||||| || ||||||| || ||||| ||||||||||||||||| |||  | || ||||||||||||||||| ||||||||||||||    
T  12587294 tattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctccggtg-caatttaggtgggctaatttagcttcttcaaa 12587387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 140 - 258
Target Start/End: Complemental strand, 17745333 - 17745216
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||| ||||||||||||||||||||||||  || ||||  || | ||||| || ||||| |||||||| |||||||| |||  | ||||||||||||| |    
T  17745333 taacgcacttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaatttaggt-g 17745235  T
Q  240 gctaacttagcttcttcaa 258  Q
    | ||| |||||||||||||    
T  17745234 gttaatttagcttcttcaa 17745216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 40257399 - 40257517
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||| ||||||||  || | ||  |||||||||| || ||||| |||||||| |||| ||| | |  | ||||||||| ||||||    
T  40257399 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaatttgggtggg 40257498  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||  ||||||||||||||    
T  40257499 ctagtttagcttcttcaaa 40257517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 15786393 - 15786304
Alignment:
Q  144 ccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaattt 233  Q
    ||||||||||||| ||||| |||||  || ||||| |||||||||| || ||||| ||||||||||||||||| |||  | |||||||||    
T  15786393 ccacttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgtcaattt 15786304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 10526821 - 10526941
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtg 238  Q
    |||||||| ||||||||| | |||||||||  || ||||  ||||||| || || ||||| ||||||||| ||||||| |||  |  |||||||| ||||    
T  10526821 ataacccatttgggttggtccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctggagtcaatttgggtg 10526920  T
Q  239 ggctaacttagcttcttcaaa 259  Q
    || ||| ||||||||||||||    
T  10526921 ggttaatttagcttcttcaaa 10526941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 233
Target Start/End: Original strand, 36371470 - 36371562
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaattt 233  Q
    ||||||||||||||||||||||||||||  || || |  |||||||||| || ||||| |||||| |||||||||| |||  |||| ||||||    
T  36371470 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctgatgccaattt 36371562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 50901580 - 50901695
Alignment:
Q  140 taacccacttgggttggcctagtggt-attaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtg 238  Q
    |||||||||||||||||||||||||| |||  || ||||  ||| |||||| || ||||| ||||||||  ||||||| |||  | || |||||||||||    
T  50901580 taacccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctcag-tgccaatttaggtg 50901678  T
Q  239 ggctaacttagcttctt 255  Q
    |||||| ||||||||||    
T  50901679 ggctaatttagcttctt 50901695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 8177258 - 8177183
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||| ||| |||||||||||||||||  || ||||| |||||||||| || ||||| |||| ||||||||||||    
T  8177258 aacccatttgagttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgatt 8177183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 16170054 - 16169979
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||| |||| |||||||| ||| ||||  |||||||||| || ||||| |||| ||||||||||||    
T  16170054 aacccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggtttcaggttcgatt 16169979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 19528403 - 19528328
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||| ||||||||  || ||||| |  ||||||| || ||||| |||||||||||||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgatt 19528328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 255
Target Start/End: Complemental strand, 52116858 - 52116743
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||| |||||||||||| ||||||||  || |||| ||||||||||| || ||||| | ||||||||||| ||| ||     || ||||| ||||||    
T  52116858 taacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcaattctccctagtgccaattaaggtgg 52116759  T
Q  240 gctaacttagcttctt 255  Q
    ||||| ||||||||||    
T  52116758 gctaatttagcttctt 52116743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 952511 - 952629
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||| ||||| || ||||| ||  || ||||  |||||||||| || ||||| | |||||||||| |||| ||   ||||||||||||||||||    
T  952511 aacccacttgagttggtctggtggtgttggcttgggacctgggagtgtgctcatcctcaaagtctcaggttagattctccccgatgtcaatttaggtggg 952610  T
Q  241 ctaacttagcttcttcaaa 259  Q
     ||| |||||||| |||||    
T  952611 ttaatttagcttcgtcaaa 952629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 44126396 - 44126510
Alignment:
Q  142 acccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggc 241  Q
    |||||||||||||||||| |||||||| ||  ||||  |||||||||| || ||| | ||||||||| || |||| |||    || |||||||||| |||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaatttaggtaggc 44126495  T
Q  242 taacttagcttcttc 256  Q
    ||| |||||||||||    
T  44126496 taatttagcttcttc 44126510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 7219952 - 7219876
Alignment:
Q  183 gagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||||| || ||||| | ||||||||||||||| |||  |||  |||||||||||| |||| ||||||||||||||    
T  7219952 gagtgtgctcctcctcgaagtctcaggttcgattctctttgataccaatttaggtggactaatttagcttcttcaaa 7219876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 9879471 - 9879555
Alignment:
Q  174 gggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaa 258  Q
    ||||| || ||||||  |||||||  ||||||||| |||||||||||   |||||||||| |||||||||| ||| |||||||||    
T  9879471 gggatctgagagtgtactcttccttgaggtctcagattcgattatctcttatgtcaatttgggtgggctaatttaacttcttcaa 9879555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 9964441 - 9964517
Alignment:
Q  144 ccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatct 220  Q
    ||||||||||| ||||  || |||| ||| ||||| |||||||||| |||||||| | |||||||||| ||||||||    
T  9964441 ccacttgggttagcctgatgttattgacttgggatctgggagtgtgctcttcctcaatgtctcaggtttgattatct 9964517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 17410238 - 17410306
Alignment:
Q  148 ttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||||||||   | ||||| ||||||||||||| ||||| || ||||| ||||||||    
T  17410238 ttgggttggcctagtggtattggtttgggatctgggagtgtggtcctcctcgagatctcaagttcgatt 17410306  T

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Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 1600333 - 1600250
Alignment:
Q  176 gatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||||||||||||| || ||||  | || |||||||||||| |||  | ||||||||| | ||| |||||||||||||||||||    
T  1600333 gatttgggagtgtgctcctccttaaagtttcaggttcgattctctctggtgtcaatttggatggactaacttagcttcttcaaa 1600250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 2799862 - 2799937
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||| | |||||||||||||||   || | ||| |||||||||| || ||||| |||||||||||||||||    
T  2799862 aacccacttcgcttggcctagtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgatt 2799937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 31383835 - 31383756
Alignment:
Q  180 tgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||||||||| || ||||   |||||||||||||||| |||  | || |||||| |||||||||||||| ||||||||||    
T  31383835 tgggagtgtgctcctccttggggtctcaggttcgattctcttaggtgccaatttgggtgggctaacttaccttcttcaaa 31383756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 255
Target Start/End: Complemental strand, 42983443 - 42983336
Alignment:
Q  148 ttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaactt 247  Q
    |||||||||| | |||||||| ||| | ||| ||||||||||||| ||||  |||||  |||||||||| |||  | || ||||||| |||| |||| ||    
T  42983443 ttgggttggcatggtggtattgacttgagatctgggagtgtggtcctccttgaggtccgaggttcgattctctcaggtgccaatttaagtggactaattt 42983344  T
Q  248 agcttctt 255  Q
    ||||||||    
T  42983343 agcttctt 42983336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 48619286 - 48619167
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||| |||||   | |||||||| ||| | || ||||||||||| | |||||| || |||||||||| |||||||  | |||||||||  ||||    
T  48619286 taacccacttaggttgatatggtggtattgacttgagacttgggagtgtgtttttcctcaagatctcaggttctattatctccggtgtcaatttgagtgg 48619187  T
Q  240 gctaacttagcttcttcaaa 259  Q
     |||| ||| ||||||||||    
T  48619186 actaatttaacttcttcaaa 48619167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 21268069 - 21267951
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||| ||||| ||||| |||||  || |||| ||||||||||| || ||||||||||||  |||| |||| |||  | |  ||||||   ||||    
T  21268069 aacccacttgagttgggctagtagtattggcttgggacttgggagtgtgctcctcctctaggtcttgggtttgattctctctggttccaatttttttggg 21267970  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  21267969 ctaatttagcttcttcaaa 21267951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 2220025 - 2220090
Alignment:
Q  194 tcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||| ||||||||||||||||| |||   |||||||||||  |||||||| |||| |||||||||    
T  2220025 tcctcgaggtctcaggttcgattctctccaatgtcaatttaaatgggctaatttagtttcttcaaa 2220090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 1094523 - 1094643
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtg 238  Q
    ||||||||||||||||||  |  ||||||| ||| || |  || ||||||| || ||| | ||||||||  ||||||| |||  | || |||||||||||    
T  1094523 ataacccacttgggttggtttgttggtattgacttggaacctgtgagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaatttaggtg 1094622  T
Q  239 ggctaacttagcttcttcaaa 259  Q
    |||||| ||| ||||||||||    
T  1094623 ggctaatttaacttcttcaaa 1094643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 244
Target Start/End: Complemental strand, 8254898 - 8254854
Alignment:
Q  200 aggtctcaggttcgattatctaggatgtcaatttaggtgggctaa 244  Q
    |||||||||||||||||||||  | ||||||||| ||||||||||    
T  8254898 aggtctcaggttcgattatctctggtgtcaatttcggtgggctaa 8254854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 14787414 - 14787294
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtg 238  Q
    ||||| |||||| |||| |||||||||||| ||| | ||  || ||||||| |  ||||| |||| |||||||||||| |||   || |||||||| |||    
T  14787414 ataactcacttgagttgacctagtggtattgacttgagacctgagagtgtgtttctcctcaaggtgtcaggttcgattctctctaatatcaatttaagtg 14787315  T
Q  239 ggctaacttagcttcttcaaa 259  Q
    || ||  ||||||||||||||    
T  14787314 ggttagtttagcttcttcaaa 14787294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 15065007 - 15065079
Alignment:
Q  183 gagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttctt 255  Q
    ||||||| || ||||| ||||||||||||| ||| ||   | ||||||||| |||||||||| ||||||||||    
T  15065007 gagtgtgctcatcctcaaggtctcaggttcaattttccccggtgtcaatttgggtgggctaatttagcttctt 15065079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 28180845 - 28180877
Alignment:
Q  227 tcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||||||||||||||||||||| |||||||||    
T  28180845 tcaatttaggtgggctaacttagtttcttcaaa 28180877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 51703778 - 51703854
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||| ||||||||| |||||||||||  || || || |||||||||| || ||||| | || ||||||||||||    
T  51703778 taacccatttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcctcaaagtttcaggttcgatt 51703854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 2e-65; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 288 - 442
Target Start/End: Complemental strand, 40864932 - 40864778
Alignment:
Q  288 acaatacctctctaacatgagcttctttatctgcttcgacatatatatagtttttgagatgatcaagagcaatagctgatctgatttgcaagtctgaccc 387  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40864932 acaatacctctctaacatgagcttctttatctgcttccacatatatgtagtttttgagatgatcaagagcaatagctgatctgatttgcaattctgaccc 40864833  T
Q  388 cttgtttatgtacttttgcatgaggcaaacagcggattcacgctcacggccaatc 442  Q
    ||| | ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  40864832 cttatctatgtacttttgcatgaggcaaacagctgtttcacgctcacggccaatc 40864778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 135 - 259
Target Start/End: Complemental strand, 10499191 - 10499067
Alignment:
Q  135 tttcataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaattta 234  Q
    ||||| ||||||||||||||||||| ||||||||  || ||||| ||||||| || |||||||  ||||||||||||||||| |||  |||||||||||     
T  10499191 tttcaaaacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttg 10499092  T
Q  235 ggtgggctaacttagcttcttcaaa 259  Q
    |||||||||| ||||||||||||||    
T  10499091 ggtgggctaatttagcttcttcaaa 10499067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 446 - 529
Target Start/End: Complemental strand, 40864635 - 40864552
Alignment:
Q  446 catttgaccatccagagctttgggtctctaacagatggcaaaagtgattgttgttctacatctgtagtttcttcatcatattct 529  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||    
T  40864635 catttgaccatccacagctttgggtctctcacagatggcaaaagtgcttgctgttctacatctgtagtttcttcatcgtattct 40864552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 148 - 259
Target Start/End: Original strand, 2667869 - 2667980
Alignment:
Q  148 ttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaactt 247  Q
    |||||||||||| ||||||||  || ||||| |||||||||| |||||||| |||||||||||||||||||||    |||||||||||||||||||  ||    
T  2667869 ttgggttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaatttaggtgggctagttt 2667968  T
Q  248 agcttcttcaaa 259  Q
    ||||||||||||    
T  2667969 agcttcttcaaa 2667980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 40865060 - 40864990
Alignment:
Q  7 tctctcattggaacaagagttatttgtcgtccaaatatattgcgaagacctttgcaagcctgaaacacatg 77  Q
    ||||| |||||||| || ||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  40865060 tctcttattggaacgagtgttattttttgtccaaatatattgcgaagacctttgcaagcctgaaacacatg 40864990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 14186647 - 14186748
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||||||||||||||||||||||  || ||||  ||| |||||| || ||||| ||||||||||||||||| |||  | |||||||||||||||    
T  14186647 taacccacttgggttggcctagtggtattgtcttgggacctgg-agtgtgctcctcctcaaggtctcaggttcgattctctccggtgtcaatttaggtgg 14186745  T
Q  240 gct 242  Q
    |||    
T  14186746 gct 14186748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 49397579 - 49397499
Alignment:
Q  179 ttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||||||||| |  ||||| |||||||| ||||||||||||  ||||||||||||||||| |||| ||||||||||||||    
T  49397579 ttgggagtgtgcttctcctcgaggtctcatgttcgattatcttagatgtcaatttaggtggactaatttagcttcttcaaa 49397499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 14339609 - 14339728
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||| |||| ||||||| ||||||||  || |||||||||||||||| || ||||| | ||||||||||||||| ||     || ||||| ||||||    
T  14339609 taacccagttggattggcctggtggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgg 14339708  T
Q  240 gctaacttagcttcttcaaa 259  Q
    ||||| ||||||||||||||    
T  14339709 gctaatttagcttcttcaaa 14339728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 51903955 - 51903836
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||| ||||||| |||  |||||||  || ||||| |||||||||| || |||||  |||||||||||||||| |||  | |||||||||  ||||    
T  51903955 taacccacctgggttgacctgttggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgg 51903856  T
Q  240 gctaacttagcttcttcaaa 259  Q
    ||||| ||||||||||||||    
T  51903855 gctaatttagcttcttcaaa 51903836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 11642285 - 11642167
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||| |||||||| |||||| |||| ||||| || || |||| || ||||| |||||||||||||||||||||    |||||||||| | |||    
T  11642285 aacccacttggattggcctactggtataaacttgggatctgagattgtgatcctcctcaaggtctcaggttcgattatctttagtgtcaatttaagaggg 11642186  T
Q  241 ctaacttagcttcttcaaa 259  Q
     ||  ||||||||||||||    
T  11642185 ttagtttagcttcttcaaa 11642167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 255
Target Start/End: Original strand, 36720381 - 36720495
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||| || ||||||||  || ||||| |||||||||| || ||||| |||| |||||||||||| |||    ||||||||||||||||    
T  36720381 aacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctctagtgtcaatttaggtggg 36720480  T
Q  241 ctaacttagcttctt 255  Q
    ||   ||||||||||    
T  36720481 ctggtttagcttctt 36720495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 4222141 - 4222238
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtg 238  Q
    ||||||||||||||||| ||||||||||  || ||||| |||||||||| || ||||| | |||| |||||||||| |||  | ||||||||||||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctggtgtcaatttaggtg 4222238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 259
Target Start/End: Complemental strand, 10445218 - 10445097
Alignment:
Q  139 ataacccacttgggttggcctagtggta-ttaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggt 237  Q
    |||||||||||||||||||||||||| | ||  || ||||  |||||||||| || ||||| ||||||||||||||||| |||  | ||  |||||  ||    
T  10445218 ataacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagt 10445119  T
Q  238 gggctaacttagcttcttcaaa 259  Q
    ||||||| ||||||||||||||    
T  10445118 gggctaatttagcttcttcaaa 10445097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 49494224 - 49494147
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||| |||||||||| ||||||||||||| ||| |  ||||||||||||| |||||||| |||||||||||| ||||    
T  49494224 ataactcacttgggttagcctagtggtattgacttgaaatttgggagtgtgctcttcctcgaggtctcaggtttgatt 49494147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 52770026 - 52769941
Alignment:
Q  174 gggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||| |||||||||| || ||||  ||||||||||||||||| |||    |||||||||||||||||||| ||||||||||||||    
T  52770026 gggatctgggagtgtgctcctccttgaggtctcaggttcgattctctttagtgtcaatttaggtgggctaatttagcttcttcaaa 52769941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 256
Target Start/End: Complemental strand, 4844580 - 4844472
Alignment:
Q  148 ttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaactt 247  Q
    ||||||||| || |||||||| ||| ||||| |||||||||| || ||||| |||||||||| |||||| |||  | || ||||||  ||||||||| ||    
T  4844580 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaattt 4844481  T
Q  248 agcttcttc 256  Q
    |||||||||    
T  4844480 agcttcttc 4844472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 148 - 256
Target Start/End: Complemental strand, 4870276 - 4870168
Alignment:
Q  148 ttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaactt 247  Q
    ||||||||| || |||||||| ||| ||||| |||||||||| || ||||| |||||||||| |||||| |||  | || ||||||  ||||||||| ||    
T  4870276 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaattt 4870177  T
Q  248 agcttcttc 256  Q
    |||||||||    
T  4870176 agcttcttc 4870168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 220
Target Start/End: Original strand, 203090 - 203169
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatct 220  Q
    |||||||||||||||||||||||||||| ||| |||||  ||||||||| | |||||  |||| | ||||||||||||||    
T  203090 aacccacttgggttggcctagtggtattgacttgggatcagggagtgtgcttttccttaaggtttgaggttcgattatct 203169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 2597296 - 2597181
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||| || ||||||||  ||  |||||| |||||||| || ||||  ||||||||||||||| | ||||  |||| ||||||||||||    
T  2597296 aacccacttgggttggtctggtggtattggcttcggatttaggagtgtgctcctccttgaggtctcaggttcgaatctctactatgtaaatttaggtggg 2597197  T
Q  241 -ctaacttagcttctt 255  Q
     |||| ||||||||||    
T  2597196 actaatttagcttctt 2597181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 8075196 - 8075085
Alignment:
Q  148 ttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaactt 247  Q
    |||||||| |||||||||||   || |||| ||||||||||| || ||||| |||| ||||||||||||  ||    ||||||||| |||||||||| ||    
T  8075196 ttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattccctctagtgtcaatttgggtgggctaattt 8075097  T
Q  248 agcttcttcaaa 259  Q
    ||||||||||||    
T  8075096 agcttcttcaaa 8075085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 8170671 - 8170790
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||| |||||||||||||||||||||  || |  | ||||||||||| || | ||| |||||||||||||||||  ||  | ||||||||| |||||    
T  8170671 taacccatttgggttggcctagtggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggttcgatttcctctggtgtcaatttgggtgg 8170770  T
Q  240 gctaacttagcttcttcaaa 259  Q
    ||||| |||  |||||||||    
T  8170771 gctaatttaaattcttcaaa 8170790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 16991541 - 16991656
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||| |||||||||||| ||||||||  || ||||| |||||||||  ||||| |  ||||||||| || |||| |||  |||| ||||||| ||||    
T  16991541 taacccatttgggttggcctggtggtattggcttgggatctgggagtgtactcttctttgaggtctcagttttgattctctccgatgccaatttatgtgg 16991640  T
Q  240 gctaacttagcttctt 255  Q
    ||||| ||||||||||    
T  16991641 gctaatttagcttctt 16991656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 27093437 - 27093362
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||||||  || || | ||||||||||| || ||||| |||||||||||| ||||    
T  27093437 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgatt 27093362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 30311306 - 30311381
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||| |||||||||||||||||||   || ||||| |||||||||| || ||||| |||||||||||||||||    
T  30311306 aacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 30311381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 31520681 - 31520563
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||| |||| |||  || ||||| |||||||||| || ||||| |||||| ||||| |||| |||    |||||||||  |||||    
T  31520681 aacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaatttgagtggg 31520582  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||| ||||||    
T  31520581 ctaatttagctttttcaaa 31520563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 243
Target Start/End: Complemental strand, 31789046 - 31788945
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||||||| ||||  || ||||| |||||||||| || ||||| |||| | ||||| ||||||||  | ||||||||| ||||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggttttaggtttgattatctctg-tgtcaatttgggtggg 31788948  T
Q  241 cta 243  Q
    |||    
T  31788947 cta 31788945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 46518628 - 46518746
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||| ||||||||||  || ||||| |||||||||| || ||||| |||| ||||||| |||| |||  |||| ||||||  | |||    
T  46518628 aacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctgatgccaatttgaggggg 46518727  T
Q  241 ctaacttagcttcttcaaa 259  Q
     ||  ||||||||||||||    
T  46518728 ttagtttagcttcttcaaa 46518746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 47454692 - 47454575
Alignment:
Q  142 acccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggc 241  Q
    ||||||||||||||  |||||||||||  || | ||| | |||||||| || ||||| ||||||||||||||||| ||    ||| |||||||||||||     
T  47454692 acccacttgggttgttctagtggtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggt 47454593  T
Q  242 taacttagcttcttcaaa 259  Q
    ||  ||||||||||||||    
T  47454592 tagtttagcttcttcaaa 47454575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 54990755 - 54990820
Alignment:
Q  194 tcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||| ||||||||||||||||| ||   |||| ||||||||||||||||| ||||||||||||||    
T  54990755 tcctcaaggtctcaggttcgattctcctcgatggcaatttaggtgggctaatttagcttcttcaaa 54990820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 28703481 - 28703405
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||| | |||| ||||| || ||||| |||||||||| || || || |||||||||||||||||    
T  28703481 taacccacttgggttggtccagtgatattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgatt 28703405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 33899653 - 33899725
Alignment:
Q  180 tgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagctt 252  Q
    |||||||||| || ||||||||||||||||||||||| |||  | ||||||||| |||| ||||| |||||||    
T  33899653 tgggagtgtgctcctcctctaggtctcaggttcgattctctttggtgtcaatttgggtgtgctaatttagctt 33899725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 259
Target Start/End: Complemental strand, 13808958 - 13808843
Alignment:
Q  144 ccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggcta 243  Q
    ||||||||||||| || ||  |||| ||| ||||| ||| |||||| || ||||||||||||||||||| ||| |||   |||||||||| | |||  ||    
T  13808958 ccacttgggttggtctggtcttattgacttgggatctggcagtgtgctcctcctctaggtctcaggttcaattctctctaatgtcaatttggatggatta 13808859  T
Q  244 acttagcttcttcaaa 259  Q
    | ||||||||||||||    
T  13808858 atttagcttcttcaaa 13808843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 15048137 - 15048058
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatct 220  Q
    ||||||||||||||||| || ||||||   || ||||| ||||| |||| || ||||| |||||||||||||||||||||    
T  15048137 aacccacttgggttggcttaatggtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatct 15048058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 37788541 - 37788466
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||||| ||||||||| ||| || |  | |||||||| || ||||| |||||||||||||||||    
T  37788541 aacccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgatt 37788466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 44743898 - 44743815
Alignment:
Q  174 gggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttca 257  Q
    ||||| |||||||||| || ||||| |||||||||||||||||||||    || |||||| |||||| ||| ||||||||||||    
T  44743898 gggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatttagcttcttca 44743815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 12761511 - 12761630
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||| | |||||||| || |||||||| ||| ||||  |||||||||| || ||||  || |||||||||||||| ||   | || ||||||||||||    
T  12761511 taacccgcatgggttggtctggtggtattgacttgggacctgggagtgtgttcctccttgagctctcaggttcgattttccccggtgccaatttaggtgg 12761610  T
Q  240 gctaacttagcttcttcaaa 259  Q
    ||||  || |||||||||||    
T  12761611 gctagttttgcttcttcaaa 12761630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 16354968 - 16354893
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||||||  || || |  || ||||||| || |||||  ||||||||||||||||    
T  16354968 aacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgatt 16354893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 11612307 - 11612373
Alignment:
Q  149 tgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgat 215  Q
    ||||||||||| |||||||| ||| ||||  |||||||||| || ||||  ||||||||||||||||    
T  11612307 tgggttggcctggtggtattcacttgggagctgggagtgtgctcctccttaaggtctcaggttcgat 11612373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 168
Target Start/End: Complemental strand, 8796170 - 8796141
Alignment:
Q  139 ataacccacttgggttggcctagtggtatt 168  Q
    ||||||||||||||||||||||||||||||    
T  8796170 ataacccacttgggttggcctagtggtatt 8796141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 44069799 - 44069876
Alignment:
Q  182 ggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||||||| || ||||| |||||||||||| |||| | |  | || ||||||||||||||||  ||||||||||||||    
T  44069799 ggagtgtgctcctcctcaaggtctcaggtttgattctttccggtgccaatttaggtgggctagtttagcttcttcaaa 44069876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 135 - 259
Target Start/End: Original strand, 7673263 - 7673387
Alignment:
Q  135 tttcataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaattta 234  Q
    ||||| |||||| || |||||| || |||||||| ||| ||||||||| |||||| |  | ||| |||||| |||||||||  |||   |||||||||||    
T  7673263 tttcacaacccagttaggttggtctggtggtattgacttgggatttggaagtgtgcttattctcaaggtcttaggttcgatactctctaatgtcaattta 7673362  T
Q  235 ggtgggctaacttagcttcttcaaa 259  Q
      ||| |||| |||| |||||||||    
T  7673363 aatggactaatttagattcttcaaa 7673387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 7973622 - 7973674
Alignment:
Q  207 aggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||||||||| |||  ||||||||||| ||||| |||| ||||||||||||||    
T  7973622 aggttcgattctctctgatgtcaatttgggtggactaatttagcttcttcaaa 7973674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 35111179 - 35111255
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||| |||||||||||| ||| | | | ||  |||||||||| || ||||| |||||||| ||||||||    
T  35111179 taacccacttggattggcctagtggcattgatttgagacctgggagtgtgctcatcctcgaggtctcatgttcgatt 35111255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 36015510 - 36015566
Alignment:
Q  203 tctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||||||| ||||| |||  | |||||||||||||||||||| || |||||||||||    
T  36015510 tctcaggtacgattctcttcggtgtcaatttaggtgggctaattttgcttcttcaaa 36015566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 45709784 - 45709670
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||| |||||||||||||||||||||| || ||||| || ||||||| || ||||| |||||||||||||||||||||  |||  |||||||||||||    
T  45709784 aacccatttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctccgataccaatttaggtggg 45709685  T
Q  241 ctaacttagcttctt 255  Q
    |||||||||||||||    
T  45709684 ctaacttagcttctt 45709670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 41519335 - 41519223
Alignment:
Q  146 acttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaac 245  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||| || ||||| |||||||||||||| || |||  | ||||||||||||||||||||     
T  41519335 acttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctcaggttcgcttctctctg-tgtcaatttaggtgggctaat 41519237  T
Q  246 ttagcttcttcaaa 259  Q
    ||||||||||||||    
T  41519236 ttagcttcttcaaa 41519223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 15137552 - 15137671
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||||||||||||| |||||| | ||| ||||||| |||||||| || ||||| |||||||||||| |||| |||  | ||||||||| |||||    
T  15137552 taacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttgggtgg 15137651  T
Q  240 gctaacttagcttcttcaaa 259  Q
    ||||| |||| |||||||||    
T  15137652 gctaatttagtttcttcaaa 15137671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 20335907 - 20335790
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||| |||| ||||||  || |||| ||||||||||| || ||||| ||||||||||||||||| ||   ||||||||||| | ||||    
T  20335907 aacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttggatggg 20335808  T
Q  241 ctaacttagcttcttcaa 258  Q
    |||| ||| |||||||||    
T  20335807 ctaatttaacttcttcaa 20335790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 139 - 255
Target Start/End: Original strand, 24513795 - 24513911
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtg 238  Q
    ||||||||||||||||||||||||||||||  || | |||||||||||||  |  ||||  ||||||||||||||||| ||   ||||||||||| ||||    
T  24513795 ataacccacttgggttggcctagtggtattggcttgagatttgggagtgtacttctccttgaggtctcaggttcgattttcactgatgtcaatttgggtg 24513894  T
Q  239 ggctaacttagcttctt 255  Q
    |||||| ||| ||||||    
T  24513895 ggctaatttaacttctt 24513911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 30579335 - 30579453
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||| ||||||||  || | ||  |||||||||   | ||||| ||||||||||||||||| |||  | || |||||||||||||    
T  30579335 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctggtgccaatttaggtggg 30579434  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  30579435 ctaatttagcttcttcaaa 30579453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 26459487 - 26459411
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||||||||||||||||  || ||||  |||||||||| || ||||| |||||||||||||||||    
T  26459487 taacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 26459411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 41487362 - 41487477
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||| ||||||||  || |||| ||||||||||  || ||||| ||||||||||||||||| |    | || |||||||||||||    
T  41487362 aacccacttgggttggcctggtggtattggcttgggacttgggagtgt--tc-tcctcaaggtctcaggttcgattcttcccggtgccaatttaggtggg 41487458  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  41487459 ctaatttagcttcttcaaa 41487477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 43590906 - 43591025
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||| |||||||||||| ||||||||  || |||| ||||||||||| || ||||| | ||||||||||||||| ||     || ||||| ||||||    
T  43590906 taacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaattaaggtgg 43591005  T
Q  240 gctaacttagcttcttcaaa 259  Q
    ||||| ||||||||||||||    
T  43591006 gctaatttagcttcttcaaa 43591025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 48771937 - 48772052
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||||||||||| | ||||||||  || ||||| |||||||||| || ||||  ||||||||||||||||||||     |  ||||||||||||    
T  48771937 taacccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgattatcccaagtaccaatttaggtgg 48772036  T
Q  240 gctaacttagcttctt 255  Q
    ||||| ||||||||||    
T  48772037 gctaatttagcttctt 48772052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 2446308 - 2446426
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||| ||  |||||||  || |||| ||||||||||| || ||||| || ||||| |||||||| |||  | || | |||||||||||    
T  2446308 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctccggtgccgatttaggtggg 2446407  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  2446408 ctaatttagcttcttcaaa 2446426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 25590611 - 25590729
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||| |||  |||||||  || | ||| |||||||||| || ||||| ||||||| ||||||||| |||  | |||||||||  |||||    
T  25590611 aacccacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaatttgagtggg 25590710  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  25590711 ctaatttagcttcttcaaa 25590729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 18363694 - 18363771
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||||||||||||||||   || | |||||||||||||| || ||||| |||||||||||| ||||    
T  18363694 ataacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgatt 18363771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 22760862 - 22760938
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||| || |||||||| ||| ||||  |||||||||| || ||||| |||||||||||||||||    
T  22760862 taacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 22760938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 139 - 255
Target Start/End: Complemental strand, 41519188 - 41519072
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtg 238  Q
    |||| |||||| ||||||||||||| || |  || |||||||  ||||||| || | ||| ||||||||| |||||||||||  | ||||||||| ||||    
T  41519188 ataatccactttggttggcctagtgatactggcttgggatttaagagtgtgctccttctcaaggtctcagattcgattatctccggtgtcaatttgggtg 41519089  T
Q  239 ggctaacttagcttctt 255  Q
    |||||| ||||||||||    
T  41519088 ggctaatttagcttctt 41519072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 180 - 259
Target Start/End: Complemental strand, 9183228 - 9183149
Alignment:
Q  180 tgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||||||||| || ||||| | |||||||||||||||||||  | ||||||||| |||||||||| |||| |||||||||    
T  9183228 tgggagtgtgctcctcctcaaagtctcaggttcgattatctctggtgtcaatttgggtgggctaatttagtttcttcaaa 9183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 259
Target Start/End: Complemental strand, 15905746 - 15905632
Alignment:
Q  144 ccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggcta 243  Q
    |||||||||||||||| | ||||||  || ||||  |||||||||| || |||| |||||||||||||||||| ||    |||||||||| |||||| ||    
T  15905746 ccacttgggttggcctggcggtattggcttgggacctgggagtgtgctcctcct-taggtctcaggttcgattctccctaatgtcaatttgggtgggtta 15905648  T
Q  244 acttagcttcttcaaa 259  Q
    | ||||||||||||||    
T  15905647 atttagcttcttcaaa 15905632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 23552118 - 23552193
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||| |||| ||| ||||  |||||||||| || ||||| |||||||| ||||||||    
T  23552118 aacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgatt 23552193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 30442487 - 30442604
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||||||||||||||| |||||||||  || ||||  ||||||| || || ||||| |||||| |||||||||| ||| ||| |||||||| |||||    
T  30442487 taacccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgattctct-gga-gtcaatttgggtgg 30442584  T
Q  240 gctaacttagcttcttcaaa 259  Q
    | ||| ||||||| ||||||    
T  30442585 gttaatttagcttattcaaa 30442604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 252
Target Start/End: Original strand, 42711962 - 42712069
Alignment:
Q  145 cacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaa 244  Q
    ||||||||||||| ||||||||||| || || |  |||||||||| || ||||| |||||||| |||||||| ||     ||||||||||||||||||||    
T  42711962 cacttgggttggcttagtggtattagcttggtacatgggagtgtgctcctcctcaaggtctcatgttcgattctccctagtgtcaatttaggtgggctaa 42712061  T
Q  245 cttagctt 252  Q
     |||||||    
T  42712062 tttagctt 42712069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 139 - 210
Target Start/End: Complemental strand, 42836079 - 42836008
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggt 210  Q
    ||||||||||||||||||||||||||||||  || ||||  |||||||||| |||||||| ||| |||||||    
T  42836079 ataacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctcaaggcctcaggt 42836008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 17041088 - 17040970
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||| ||||||| |||  || ||||| ||| |||||| || ||||| ||||||||||||||||| |||    || |||||| ||||||    
T  17041088 aacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaatttgggtggg 17040989  T
Q  241 ctaacttagcttcttcaaa 259  Q
      || ||||||||||||||    
T  17040988 tcaatttagcttcttcaaa 17040970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 35513467 - 35513580
Alignment:
Q  142 acccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggc 241  Q
    ||||| |||||||||||||||||||||  || |||| ||| ||||||| || ||||| |  ||||| |||||||| |||  ||||  ||||||||||| |    
T  35513467 acccatttgggttggcctagtggtatttgcttgggacttgagagtgtgctcctcctcgatatctcatgttcgattttctccgatggtaatttaggtggac 35513566  T
Q  242 taacttagcttctt 255  Q
    ||| ||||||||||    
T  35513567 taatttagcttctt 35513580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 39631842 - 39631919
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||||||||  || ||||  |||||||  | || ||||| |||||||||||||||||    
T  39631842 ataacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgatt 39631919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 244
Target Start/End: Original strand, 7801179 - 7801283
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||||| ||||||| |||||||| ||| ||||  |||||||||| || || || |||||||||||||||    ||  |||||||||||| ||||    
T  7801179 taacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctcaggttcgaacccctccgatgtcaatttaagtgg 7801278  T
Q  240 gctaa 244  Q
    |||||    
T  7801279 gctaa 7801283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 22927477 - 22927524
Alignment:
Q  142 acccacttgggttggcctagtggtattaactagggatttgggagtgtg 189  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  22927477 acccacttgggttggcctagtggtattaacttgggatctaggagtgtg 22927524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 23301678 - 23301603
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||| || ||||  |||||||| ||| ||||    
T  23301678 aacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtctcaagtttgatt 23301603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 43215184 - 43215259
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||| |||||||||||  || ||||  | |||||||| || ||||| |||||||||||||||||    
T  43215184 aacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgatt 43215259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 259
Target Start/End: Complemental strand, 43663168 - 43663053
Alignment:
Q  144 ccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggcta 243  Q
    ||||||||||||||||  ||||||| ||| ||||  | |||| |||||| ||||| || |||||||||||| | |||  | | ||||||| ||||| |||    
T  43663168 ccacttgggttggcctgatggtattgacttgggacctaggagcgtggtcctcctcgagatctcaggttcgaatctctccggtatcaatttgggtggacta 43663069  T
Q  244 acttagcttcttcaaa 259  Q
    | ||||||||||||||    
T  43663068 atttagcttcttcaaa 43663053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 7309396 - 7309473
Alignment:
Q  181 gggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||||||| || ||||| |||||||| |||||||| |||  | |||||||||| ||||||||| ||||||||||||||    
T  7309396 gggagtgtgctcctcctcgaggtctcaagttcgattctctccg-tgtcaatttaagtgggctaatttagcttcttcaaa 7309473  T

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Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 2882991 - 2883067
Alignment:
Q  182 ggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||||||| || ||||| ||||||||||||| ||| |||  | || ||||||||||||||| ||||||||||||||||    
T  2882991 ggagtgtgctcctcctcaaggtctcaggttcaattctctctggtggcaatttaggtgggct-acttagcttcttcaaa 2883067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 21558181 - 21558246
Alignment:
Q  194 tcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||| ||||||||||||||||| |||  | || ||||||||||||| ||| ||||||||||||||    
T  21558181 tcctcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatttagcttcttcaaa 21558246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 27313772 - 27313692
Alignment:
Q  179 ttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||||||| || || ||||| |||| |||| ||||||| |||  |||| ||||||||||| ||||| ||||||||||||||    
T  27313772 ttgggagtttgctcctcctcaaggtttcagattcgattctctctgatgccaatttaggtgagctaatttagcttcttcaaa 27313692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 216
Target Start/End: Complemental strand, 37085618 - 37085550
Alignment:
Q  148 ttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||| | ||||||||  || |||||||||||||||| || ||||| |||| ||||||||||||    
T  37085618 ttgggttggcatggtggtattggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgatt 37085550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 207
Target Start/End: Complemental strand, 25021412 - 25021345
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctca 207  Q
    |||||||||||||||||||||||||||||  || ||||  |||||||||| || ||||| | ||||||    
T  25021412 taacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 25655304 - 25655229
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||| ||||||||  |||||||||| ||| ||||| || ||||||| || ||||| |||| ||||||||||||    
T  25655304 aacccacctgggttggtttagtggtattgacttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgatt 25655229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 35119383 - 35119458
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||| ||||||||||||||||||||| ||| ||||| |||| || || || ||||| || | ||||||||||||    
T  35119383 aacccatttgggttggcctagtggtattgacttgggatctgggtgtatgctcatcctcaagatttcaggttcgatt 35119458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 37473673 - 37473732
Alignment:
Q  200 aggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||||||||||||||| ||    ||||||||||||||||| ||| ||||||||||||||    
T  37473673 aggtctcaggttcgattctccctaatgtcaatttaggtgggttaatttagcttcttcaaa 37473732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 4572314 - 4572256
Alignment:
Q  200 aggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaa 258  Q
    ||||||||||||||||| |||  | ||||||||| |||||||||| ||| |||||||||    
T  4572314 aggtctcaggttcgattctctccggtgtcaatttgggtgggctaatttatcttcttcaa 4572256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 21854550 - 21854616
Alignment:
Q  143 cccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcagg 209  Q
    |||||||||||||||||  |||||||  |||||||| |||||||||| || ||||| | ||||||||    
T  21854550 cccacttgggttggcctgatggtattggctagggatctgggagtgtgctcctcctcaaagtctcagg 21854616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 259
Target Start/End: Complemental strand, 29385817 - 29385701
Alignment:
Q  143 cccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggct 242  Q
    ||||||||||||||||   |||| ||  || |||| || |||||||| || ||||| |||||||||||| |||| |||  | || |||||| ||||||||    
T  29385817 cccacttgggttggccggatggtgttggcttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctctttggtgccaatttgggtgggct 29385718  T
Q  243 aacttagcttcttcaaa 259  Q
    |  || |||||||||||    
T  29385717 acttttgcttcttcaaa 29385701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 255
Target Start/End: Complemental strand, 44628257 - 44628146
Alignment:
Q  143 cccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggct 242  Q
    ||||||||||||||||| ||| | ||| || ||||  | |||||||| || ||||| | |||||| ||| ||||  || || ||||||||| ||||||||    
T  44628257 cccacttgggttggcctggtgttgttagcttgggaccttggagtgtgctcctcctcaaagtctcaagtttgattccctcgg-tgtcaattttggtgggct 44628159  T
Q  243 aacttagcttctt 255  Q
    || ||||||||||    
T  44628158 aatttagcttctt 44628146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 45559199 - 45559227
Alignment:
Q  140 taacccacttgggttggcctagtggtatt 168  Q
    |||||||||||||||||||||||||||||    
T  45559199 taacccacttgggttggcctagtggtatt 45559227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 15399 - 15281
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||| || ||||||||  || ||||  |||||||||| || ||||| ||||||||||||||||| ||| ||||| |||||||||||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtggg 15300  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  15299 ctaatttagcttcttcaaa 15281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 9e-25; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 16773807 - 16773925
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||| ||||| || |||||||| ||| ||||  |||||||||| || ||||| ||||||||||||||||| |||  |||| |||||||||||||    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtggg 16773906  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  16773907 ctaatttagcttcttcaaa 16773925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 29075780 - 29075899
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||||||||||| |||||||||||||  || ||||| |||||||||| || ||||| || ||||| |||||||| |||  | || |||||||| |||    
T  29075780 taacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatgg 29075879  T
Q  240 gctaacttagcttcttcaaa 259  Q
    ||||| ||||||||||||||    
T  29075880 gctaatttagcttcttcaaa 29075899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 6844728 - 6844847
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||||||||||||  |||||||| ||| || ||||||||||||| || ||||| |||||| ||||||||||||||    || ||||||||||||    
T  6844728 taacccacttgggttggccaggtggtattgacttggaatttgggagtgtgttcctcctcgaggtctaaggttcgattatctctcgtgccaatttaggtgg 6844827  T
Q  240 gctaacttagcttcttcaaa 259  Q
      ||  ||||||||||||||    
T  6844828 attagtttagcttcttcaaa 6844847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 22737082 - 22737200
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||| |||||||||||  || |||| |||| |||||| || ||| | | |||||||||||||||  ||  ||| ||||||||||||||    
T  22737082 aacccacttgggttggtctagtggtattggcttgggacttggaagtgtgctcctccccaatgtctcaggttcgattccctctgatatcaatttaggtggg 22737181  T
Q  241 ctaacttagcttcttcaaa 259  Q
     ||| ||||||||||||||    
T  22737182 ttaatttagcttcttcaaa 22737200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 139 - 256
Target Start/End: Complemental strand, 17028342 - 17028225
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtg 238  Q
    ||||||||||||||||| |||||| |||||   | |||| ||||||||||| || ||||| |||||||||||| ||||  ||    ||||||||||||||    
T  17028342 ataacccacttgggttgacctagttgtattgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttaggtg 17028243  T
Q  239 ggctaacttagcttcttc 256  Q
    |||||| |||||||||||    
T  17028242 ggctaatttagcttcttc 17028225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 140 - 233
Target Start/End: Original strand, 25627056 - 25627149
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaattt 233  Q
    |||||||||||||||||||||||||||||  || || | ||||||||||| || ||||| ||||||||||||||||| |||  | |||||||||    
T  25627056 taacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 25627149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 135 - 259
Target Start/End: Complemental strand, 3252371 - 3252247
Alignment:
Q  135 tttcataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaattta 234  Q
    |||| ||||||||||||||||||||||||||||| ||| | || |||||||||   ||||||||  | |||||||||||||| |||  |||| |||||      
T  3252371 tttcttaacccacttgggttggcctagtggtattgacttgagacttgggagtgcactcttcctcaggctctcaggttcgattctctctgatgccaattcg 3252272  T
Q  235 ggtgggctaacttagcttcttcaaa 259  Q
    | |||||||| |||| |||||||||    
T  3252271 gatgggctaatttagtttcttcaaa 3252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 14495882 - 14495766
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||| ||||||||| || |||||||| ||| ||||| |||||||||| || ||||| ||||||||| || |||| |||  |||| |||||||| |||    
T  14495882 taacccatttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaatttagatgg 14495783  T
Q  240 gctaacttagcttcttc 256  Q
    ||||  |||||||||||    
T  14495782 gctagtttagcttcttc 14495766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 8278352 - 8278233
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||||||||||||| ||  |||||||  || |||| ||||||||||| || ||||| || ||||| ||| ||||||||  | || | ||||||||||    
T  8278352 taacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagtttgattatctccggtgccgatttaggtgg 8278253  T
Q  240 gctaacttagcttcttcaaa 259  Q
    ||||| ||||||||||||||    
T  8278252 gctaatttagcttcttcaaa 8278233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 22020938 - 22020820
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||| ||||||||||| ||||||||||| || ||||| |||||||||| || ||||  | ||||||| ||||||| |||    ||| ||||||||||||    
T  22020938 aaccctcttgggttggcatagtggtattagcttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctccagtgttaatttaggtggg 22020839  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| |||| |||||||||    
T  22020838 ctaatttagtttcttcaaa 22020820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 29173531 - 29173604
Alignment:
Q  182 ggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttctt 255  Q
    |||||||| || ||||| |||| ||||||||||||||||  | |||||||||||||||||||| ||||||||||    
T  29173531 ggagtgtgctcctcctcgaggtttcaggttcgattatctctggtgtcaatttaggtgggctaatttagcttctt 29173604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 21589288 - 21589406
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||| ||||||||  || ||||  ||||||| || |  ||||| | |||||||||||||||  ||  | || |||||||||||||    
T  21589288 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaatttaggtggg 21589387  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||  ||||||||||||||    
T  21589388 ctagtttagcttcttcaaa 21589406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 87499 - 87424
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||| ||||||||||||||||||  || || || |||||||||| || ||||| |||||||||||| ||||    
T  87499 aacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtttgatt 87424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 1410728 - 1410619
Alignment:
Q  148 ttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaactt 247  Q
    ||||||||| || |||||||| ||| ||||| |||||||||| || ||||| ||||||||| ||||||| |||  | ||||||||  ||| |||||| ||    
T  1410728 ttgggttggtctggtggtattgacttgggatatgggagtgtgctcctcctcgaggtctcag-ttcgattctctgtggtgtcaattg-ggtaggctaattt 1410631  T
Q  248 agcttcttcaaa 259  Q
    ||||||||||||    
T  1410630 agcttcttcaaa 1410619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 145 - 244
Target Start/End: Complemental strand, 43241754 - 43241655
Alignment:
Q  145 cacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaa 244  Q
    |||||||||||| ||||||||||| ||| ||||| | ||||||||  ||||||  ||||||||||||| ||| |||  |||| |||||||| ||| ||||    
T  43241754 cacttgggttggtctagtggtattgacttgggatcttggagtgtgcccttccttgaggtctcaggttcaattctcttcgatgccaatttagctggactaa 43241655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 43442235 - 43442314
Alignment:
Q  180 tgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||||||||| || ||||| ||||||||||||||||| |||  | ||||||||| | |||||||| |||| |||||||||    
T  43442235 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttggatgggctaatttagtttcttcaaa 43442314  T

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Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 24907542 - 24907607
Alignment:
Q  194 tcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||| || |||||||||||||||||   |||| ||||||||||||||||| ||||||| ||||||    
T  24907542 tcctcaagttctcaggttcgattatccttgatgccaatttaggtgggctaatttagcttattcaaa 24907607  T

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Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 18437088 - 18437160
Alignment:
Q  144 ccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||| |||||||||||||||||||||| |||| ||| ||||||| || ||||| | || || |||||||||    
T  18437088 ccacttaggttggcctagtggtattaacttgggacttgagagtgtgctcctcctcaaagtttcgggttcgatt 18437160  T

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Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 19043457 - 19043529
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttc 212  Q
    |||||||||||||||||||||||| |||| ||| || | ||||||||||| || | ||| | |||||||||||    
T  19043457 taacccacttgggttggcctagtgctattgacttggaacttgggagtgtgttccttctcaaagtctcaggttc 19043529  T

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Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 14285161 - 14285236
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||||| ||||| |||  || || |  |||||||||| || ||||| |||||||||||||||||    
T  14285161 aacccacttgggttggccgagtggaattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgatt 14285236  T

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Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 16436622 - 16436692
Alignment:
Q  145 cacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||  || |||| || |||||||| || ||||| |||||||| ||||||||    
T  16436622 cacttgggttggcctagtggtattggcttgggactt-ggagtgtgctcctcctcaaggtctcatgttcgatt 16436692  T

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Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 18169905 - 18169793
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||| ||||||||   |||||| ||| ||||| ||||||||||||| || ||  ||||| |||||||||| |||  | || ||| |||||||||    
T  18169905 aacccacttgagttggcct---ggtattgacttgggatctgggagtgtggtcctcttcgtggtct-aggttcgattctctcag-tgccaaattaggtggg 18169811  T
Q  241 ctaacttagcttcttcaa 258  Q
    |||| |||||||||||||    
T  18169810 ctaatttagcttcttcaa 18169793  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 21549213 - 21549138
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||||||  || ||||  |||||||||| || ||||  | |||||| ||||||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgatt 21549138  T

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Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 26078127 - 26078052
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||||||   | |||| |||||||| || |  || || |||||||||||||||||    
T  26078127 aacccacttgggttggcctagtggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgatt 26078052  T

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Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 30883274 - 30883203
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttc 212  Q
    |||||||||||||||| |||||||||||  || ||||  |||||||||| || ||||| |||||||| ||||    
T  30883274 aacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttc 30883203  T

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Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 34984806 - 34984881
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||| |||||||||||  || || |  |||||||||| || ||||| |||||| ||||||||||    
T  34984806 aacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgatt 34984881  T

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Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 258
Target Start/End: Original strand, 35705045 - 35705103
Alignment:
Q  200 aggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaa 258  Q
    ||||||||||||||||| ||   | ||||||||| |||||||||| |||||||||||||    
T  35705045 aggtctcaggttcgattctccccggtgtcaatttgggtgggctaatttagcttcttcaa 35705103  T

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Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 168
Target Start/End: Complemental strand, 7918547 - 7918518
Alignment:
Q  139 ataacccacttgggttggcctagtggtatt 168  Q
    ||||||||||||||||||||||||||||||    
T  7918547 ataacccacttgggttggcctagtggtatt 7918518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 5390926 - 5390853
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||| |||||||||||||||||||||  || |||  ||||||  ||| || ||||| |||||||||||||||||    
T  5390926 aacccatttgggttggcctagtggtattggcttggggcttggga--gtgctcctcctcgaggtctcaggttcgatt 5390853  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 10054109 - 10054165
Alignment:
Q  203 tctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||||||||||||| |||  ||| |||| || |||||||||| ||||||||||||||    
T  10054109 tctcaggttcgattctctccgatatcaacttgggtgggctaatttagcttcttcaaa 10054165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 14804743 - 14804671
Alignment:
Q  144 ccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||||||| ||||   | |||||||| ||||||| || | ||||| |||| ||||||||||    
T  14804743 ccacttgggttggcctagtgttattggtttgggatttgtgagtgtgttccttctctaagtcttaggttcgatt 14804671  T

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Target: chr8 (Bit Score: 55; Significance: 2e-22; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 255
Target Start/End: Original strand, 968362 - 968476
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||| |||||||| ||||||||  || ||||  |||||||||| || ||||| ||||||||||||||||| |||  |||| |||||||||||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtggg 968461  T
Q  241 ctaacttagcttctt 255  Q
    |||| ||||||||||    
T  968462 ctaatttagcttctt 968476  T

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Target: chr8; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 140 - 249
Target Start/End: Complemental strand, 23361726 - 23361617
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||||||||| ||| |||||||| ||| ||||| |||||||||| || ||||| ||||||||||||| ||| |||  | |||||||||||||||    
T  23361726 taacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaatttaggtgg 23361627  T
Q  240 gctaacttag 249  Q
    ||||| ||||    
T  23361626 gctaatttag 23361617  T

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Target: chr8; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 16852340 - 16852458
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||||||||||||  || ||||  |||||||||| || ||||| ||||||||||||||||| ||     || |||||||||||||    
T  16852340 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccttagtgccaatttaggtggg 16852439  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||  ||||||||||||||    
T  16852440 ctattttagcttcttcaaa 16852458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 44780190 - 44780072
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||||||||||| |||  || |||| ||||||||||| || ||||| |||||||||||| ||||  ||    ||||||||| ||||||    
T  44780190 aacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttgggtggg 44780091  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  44780090 ctaatttagcttcttcaaa 44780072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 259
Target Start/End: Original strand, 3624577 - 3624697
Alignment:
Q  138 cataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggt 237  Q
    |||| ||||||||||||||||||||||||||  || ||||  |||||||||| || || || ||||||||||||||||| |||  |  ||||||||||||    
T  3624577 catagcccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctccg-ggtcaatttaggt 3624675  T
Q  238 gggctaacttagcttcttcaaa 259  Q
    ||||||| ||||||| ||||||    
T  3624676 gggctaatttagctttttcaaa 3624697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 11819775 - 11819894
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||| |||||||| |||||||||||   || |||| ||||||||||| || ||||| |||||||||||||||||  ||    ||||||||| |||||    
T  11819775 taacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttgggtgg 11819874  T
Q  240 gctaacttagcttcttcaaa 259  Q
    ||||| ||||||||||||||    
T  11819875 gctaatttagcttcttcaaa 11819894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 143 - 259
Target Start/End: Original strand, 2203494 - 2203610
Alignment:
Q  143 cccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggct 242  Q
    ||||||||||||||||||||||||||  || ||||  |||||||||| || ||||| |||||||||| || ||| ||   | || |||||| ||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggct 2203593  T
Q  243 aacttagcttcttcaaa 259  Q
    || ||||||| ||||||    
T  2203594 aatttagcttattcaaa 2203610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 19703563 - 19703488
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||||||  || ||||  || ||||||| || ||||| |||||||||||||||||    
T  19703563 aacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgatt 19703488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 20994534 - 20994419
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggt-cttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||||||||||||||||||||| ||| ||||  |||||||||| | || |||| | |||||||| ||||||||||  | |  |||||| | |||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctccctcaaagtctcaggatcgattatctctggtaccaatttggatgg 20994435  T
Q  240 gctaacttagcttctt 255  Q
    ||||| ||||||||||    
T  20994434 gctaatttagcttctt 20994419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 8059632 - 8059750
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||||||  ||||||| ||| || || || ||||||| || ||||| ||||||||||||| ||| ||   |||||||||||  ||| |    
T  8059632 aacccacttgggttggcctgatggtattgacttggcatgtgagagtgtgatcctcctcaaggtctcaggttccattctccctgatgtcaatttgagtgag 8059731  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||  ||||||||||||||    
T  8059732 ctagtttagcttcttcaaa 8059750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 8484999 - 8485117
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||| ||||||||  || ||||  || ||||||| || || |  ||||||||  ||||||| |||  | || |||||||||||||    
T  8484999 aacccacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcctctttgaggtctcattttcgattctctccggtgccaatttaggtggg 8485098  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  8485099 ctaatttagcttcttcaaa 8485117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 18540298 - 18540416
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||||||||||||  || ||||  |||||||||  |  ||||| ||||||||||||||||| |||  | || ||||||  | |||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagaggg 18540397  T
Q  241 ctaacttagcttcttcaaa 259  Q
     ||| ||||||||||||||    
T  18540398 ttaatttagcttcttcaaa 18540416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 28783060 - 28783178
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||| | ||||||||  || | ||  |||||||||| || ||||| |||||||| |||||||| ||   | || |||||| ||||||    
T  28783060 aacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggtggg 28783159  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  28783160 ctaatttagcttcttcaaa 28783178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 29431011 - 29431129
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||| | ||||||  || |||| ||||||||||| || ||||  ||| ||||||||||||| |||  | ||  |||||  |||||    
T  29431011 aacccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctccttgaggcctcaggttcgattctctttggtgctaatttgagtggg 29431110  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  29431111 ctaatttagcttcttcaaa 29431129  T

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Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 29858124 - 29858007
Alignment:
Q  142 acccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggc 241  Q
    |||||||||| ||||||| ||||||||  || ||||   ||||||||| || ||||| |||||||||||||||||  |   | || ||||||||||||||    
T  29858124 acccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattcccctcggtgccaatttaggtgggc 29858025  T
Q  242 taacttagcttcttcaaa 259  Q
    ||| ||||||| ||||||    
T  29858024 taatttagctttttcaaa 29858007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 4830487 - 4830605
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||| ||||||||   | ||||| || ||||||| || ||||| ||||||||||||| | | | || | ||||||||| | |||     
T  4830487 aacccacttgggttggcctggtggtatttgtttgggatctgagagtgtgttcctcctcgaggtctcaggttcaaatttatacggtgtcaatttggatgga 4830586  T
Q  241 ctaacttagcttcttcaaa 259  Q
     ||| ||||||||||||||    
T  4830587 ttaatttagcttcttcaaa 4830605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 27750728 - 27750805
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||| |||||||| ||| |||||||   || |||| ||||||||||| || ||||| |||||||||||||||||    
T  27750728 ataacccatttgggttgccctcgtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgatt 27750805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 233
Target Start/End: Complemental strand, 6569847 - 6569755
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaattt 233  Q
    ||||||||| ||||||||||||| ||||  || ||||| |||||||||| || |||| ||||| ||| |||||||| |||  | |||||||||    
T  6569847 aacccacttaggttggcctagtgatattggcttgggatctgggagtgtgctcctcctttaggtttcatgttcgattctctttggtgtcaattt 6569755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 35690129 - 35690037
Alignment:
Q  152 gttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaa 244  Q
    |||||||||||||||||  || ||||| |||| || || || ||||| ||||||||||||||||| |||  | |||||||||| || ||||||    
T  35690129 gttggcctagtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaagtaggctaa 35690037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 3826853 - 3826778
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||||||  || |  ||||| ||||||| || ||| | || ||||||||||||||    
T  3826853 aacccacttgggttggcctagtggtattggcttgccatttgagagtgtgctcctccacgagatctcaggttcgatt 3826778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 11518954 - 11518835
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||||||||||| ||||||||||||   || || | ||||||||||   | ||||| |||||| ||||||||||  |||  ||||||||||  ||||    
T  11518954 taacccacttgggttagcctagtggtataggcttggaacttgggagtgtacccctcctcaaggtcttaggttcgattcactataatgtcaatttgagtgg 11518855  T
Q  240 gctaacttagcttcttcaaa 259  Q
    ||||| |||| || ||||||    
T  11518854 gctaatttagtttattcaaa 11518835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 30483960 - 30483889
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttc 212  Q
    |||||||||||||||||| |||||||||  || ||||| |||||||||| || |||||   |||||||||||    
T  30483960 aacccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcctcagagtctcaggttc 30483889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 35641977 - 35641902
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||| || |||||||   || | |||||||||||||| || ||||| | |||||||||||||||    
T  35641977 aacccacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcctcgatgtctcaggttcgatt 35641902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 6536561 - 6536635
Alignment:
Q  182 ggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttc 256  Q
    |||||||| || ||||| ||||||||||||| ||| |||  | || ||||||||||||| ||| |||||||||||    
T  6536561 ggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatttagcttcttc 6536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 7347921 - 7347955
Alignment:
Q  225 tgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||||||||||||||||||| ||||||||||||||    
T  7347921 tgtcaatttaggtgggctaatttagcttcttcaaa 7347955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 23874460 - 23874386
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcg 213  Q
    ||||||||||||||||||||||||||||||  || ||||  ||||| | ||  | ||||| ||||||||||||||    
T  23874460 ataacccacttgggttggcctagtggtattggcttgggacctgggaatctgcgcctcctcgaggtctcaggttcg 23874386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 42740501 - 42740587
Alignment:
Q  148 ttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaattta 234  Q
    ||||||||| |||||||||||| || |  |||||||||| || || ||||| ||||||||||||| ||| |||  | ||||||||||    
T  42740501 ttgggttggtctagtggtattagcttgaaatttgggagtttgatcatcctcaaggtctcaggttcaattctctctggtgtcaattta 42740587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 258
Target Start/End: Complemental strand, 3058125 - 3058009
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||| ||||||||| || ||||||||   | |||  ||||||||||| || ||  | ||||||||||||||||| |||  |  |||||||||||||||    
T  3058125 aacccatttgggttggtctggtggtattggtttgggtcttgggagtgtgctcctctgcaaggtctcaggttcgattctcttcggcgtcaatttaggtggg 3058026  T
Q  241 ctaacttagcttcttcaa 258  Q
    || | |||||||||||||    
T  3058025 ct-atttagcttcttcaa 3058009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 3305231 - 3305146
Alignment:
Q  174 gggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||| |||||| ||| || ||||| ||||||||  |||||||||||  | || ||||||||||||||||| ||| ||||| ||||    
T  3305231 gggatctgggagcgtgctcctcctcaaggtctcaaattcgattatctctggtgccaatttaggtgggctaatttatcttctgcaaa 3305146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 16843832 - 16843753
Alignment:
Q  179 ttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||||||||| || ||| | || |||||||||||||| |||  | ||||||||||| |||||| | ||||||||||||||    
T  16843832 ttgggagtgtgctcctccgcaagatctcaggttcgattctctccggtgtcaatttagatgggct-atttagcttcttcaaa 16843753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 2e-22; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 255
Target Start/End: Original strand, 33549104 - 33549218
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||| || ||||||||  || ||||  |||||||||| || ||||| ||||||||||||||||| ||| ||||| ||||||||||| |    
T  33549104 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgag 33549203  T
Q  241 ctaacttagcttctt 255  Q
    |||| ||||||||||    
T  33549204 ctaatttagcttctt 33549218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 6758497 - 6758380
Alignment:
Q  142 acccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggc 241  Q
    ||||||||| |||||||| ||||||||  ||  ||||||||||||||| ||  |||| |||||||| | |||||| |||  | |||||||||||||||||    
T  6758497 acccacttgtgttggcctggtggtattggcttaggatttgggagtgtgctccacctcgaggtctcaagatcgattctctctggtgtcaatttaggtgggc 6758398  T
Q  242 taacttagcttcttcaaa 259  Q
     || ||||||||||||||    
T  6758397 aaatttagcttcttcaaa 6758380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 256
Target Start/End: Original strand, 12633008 - 12633124
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||||||||| ||  ||| |||| ||| |||||||||||||||| || || || || ||||| |||||||| |||   ||||||||||| ||||    
T  12633008 taacccacttgggttgtcccggtgatattgacttgggatttgggagtgtgctcctcttcgagatctcatgttcgattctctccaatgtcaatttaagtgg 12633107  T
Q  240 gctaacttagcttcttc 256  Q
     |||| |||||||||||    
T  12633108 actaatttagcttcttc 12633124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 12234583 - 12234469
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||| ||||||||| |||||||| ||| ||||  |||||||||| ||   ||| ||||||||||||||||| |||    ||||||||||| ||||    
T  12234583 aacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctccagtgtcaatttagatggg 12234484  T
Q  241 ctaacttagcttctt 255  Q
     ||| ||||||||||    
T  12234483 ataatttagcttctt 12234469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 21418470 - 21418588
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||| |||||||||||| ||||||||  || |||| ||||||||||| || ||||| | |||||| |||||||| ||     || ||||| |||||||    
T  21418470 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgattctccctagtgccaattaaggtggg 21418569  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  21418570 ctaatttagcttcttcaaa 21418588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 31623067 - 31622949
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||| |  ||||||||  || ||||  |||||||||| || ||||| |||||||||||| || |  ||  | ||||||||| ||||||    
T  31623067 aacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtttgaatcactccggtgtcaatttgggtggg 31622968  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  31622967 ctaatttagcttcttcaaa 31622949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 1056762 - 1056643
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||||||||| ||||||||||||  |  |||| |||||||| || || ||||| |||| | | |||||||| |||  | || ||| ||||||||    
T  1056762 taacccacttgggttgacctagtggtattggcctgggacttgggagtatgctcatcctcaaggttttaagttcgattctctctggtgccaagttaggtgg 1056663  T
Q  240 gctaacttagcttcttcaaa 259  Q
    | ||| ||||||||||||||    
T  1056662 gttaatttagcttcttcaaa 1056643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 12188379 - 12188304
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||||||  || ||||  |||||||||| || ||||| |||| ||| ||||||||    
T  12188379 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgatt 12188304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 14557962 - 14558080
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||| || ||||| ||  || ||||  ||| |||||| || |||||  |||||||||||||||| ||  || ||||||||| |||||     
T  14557962 aacccacttgggttggtctggtggtgttggcttgggacctggaagtgtgctcctcctccgggtctcaggttcgattctcccgg-tgtcaatttgggtggt 14558060  T
Q  241 ctaacttagcttcttcaaac 260  Q
    |||| |||||||||||||||    
T  14558061 ctaatttagcttcttcaaac 14558080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 30127399 - 30127518
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||||||||||||| || ||||||||  || ||| | |||||||||| || || || ||||||||||||||||| | |  | || |||||||||| |    
T  30127399 taacccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgattctttccggtgccaatttaggtag 30127498  T
Q  240 gctaacttagcttcttcaaa 259  Q
    | ||| |||||||| |||||    
T  30127499 gttaatttagcttcctcaaa 30127518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 216
Target Start/End: Original strand, 11423565 - 11423641
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||| |||||| ||| || |||||||| ||| ||||||||||||| || |  ||||| |||||||||||||||||    
T  11423565 taacccgcttgggctggtctggtggtattgacttgggatttgggagtatgcttctcctcgaggtctcaggttcgatt 11423641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 3715451 - 3715566
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||||| || |||||| ||||||||||| ||| | ||| ||||||| || |  || || |||||||| |||||||| |||    |||||||||||||||    
T  3715451 taacccattttggttgggctagtggtattgacttgagatctgggagtatgcttctcgtcgaggtctcaagttcgattctctccagtgtcaatttaggtgg 3715550  T
Q  240 gctaacttagcttctt 255  Q
    ||| | ||||||||||    
T  3715551 gctgatttagcttctt 3715566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 259
Target Start/End: Original strand, 28363948 - 28364055
Alignment:
Q  152 gttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagct 251  Q
    |||||| ||||||||||   | ||||| || ||||||| || ||||| ||||||||| |||||||||||  | ||||||||| | |||||||| |||  |    
T  28363948 gttggcatagtggtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattcgattatctctggtgtcaatttggatgggctaatttaatt 28364047  T
Q  252 tcttcaaa 259  Q
    ||||||||    
T  28364048 tcttcaaa 28364055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 143 - 257
Target Start/End: Complemental strand, 32613214 - 32613100
Alignment:
Q  143 cccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggct 242  Q
    ||||||||||||||||| |||||||| ||| ||| | |||||||||| || | ||| || ||||| |||||||| |||    ||||||||||  ||| ||    
T  32613214 cccacttgggttggcctggtggtattgacttggggtctgggagtgtgctccttctcaagatctcatgttcgattctcttcagtgtcaatttaaatggact 32613115  T
Q  243 aacttagcttcttca 257  Q
    |  ||||||||||||    
T  32613114 agtttagcttcttca 32613100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 12216803 - 12216847
Alignment:
Q  200 aggtctcaggttcgattatctaggatgtcaatttaggtgggctaa 244  Q
    ||||||||||||||||| ||| |  ||||||||||||||||||||    
T  12216803 aggtctcaggttcgattctcttgactgtcaatttaggtgggctaa 12216847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 7949530 - 7949412
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||| |||||||| ||||||  || ||||  | |||||||| || ||||| ||||||||||||||||| |||  | ||||||||||||||||    
T  7949530 aacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtggg 7949431  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  7949430 ctaatttagcttcttcaaa 7949412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 28635694 - 28635814
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtg 238  Q
    ||||||||||||||||| ||| |||||| | ||| ||||| |||||||||| || ||||  |||||| |||||||||| |||  | || |||||| ||||    
T  28635694 ataacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtg 28635793  T
Q  239 ggctaacttagcttcttcaaa 259  Q
    |||||| ||||||||||||||    
T  28635794 ggctaatttagcttcttcaaa 28635814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 49576963 - 49576852
Alignment:
Q  148 ttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaactt 247  Q
    |||||||||||| ||||||||  ||  ||| ||||||||||| || ||||| ||||||||||||||||| |||   |||||||||| ||||| |||||||    
T  49576963 ttgggttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctccaatgtcaatttgggtggactaactt 49576864  T
Q  248 agcttcttcaaa 259  Q
    | ||||||||||    
T  49576863 aacttcttcaaa 49576852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 21660220 - 21660106
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||| ||||||||||| || |||||||| ||| | ||| |||||||||| |||||||| |||||||| ||||||||||||    ||||||||||||| |     
T  21660220 aaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtaga 21660121  T
Q  241 ctaacttagcttctt 255  Q
    |||| ||||||||||    
T  21660120 ctaatttagcttctt 21660106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 21668984 - 21668870
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||| ||||||||||| || |||||||| ||| | ||| |||||||||| |||||||| |||||||| ||||||||||||    ||||||||||||| |     
T  21668984 aaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtaga 21668885  T
Q  241 ctaacttagcttctt 255  Q
    |||| ||||||||||    
T  21668884 ctaatttagcttctt 21668870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 37109428 - 37109352
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||||||||||||||||  || ||||  |||||||||| || ||||| |||||||||||||||||    
T  37109428 taacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 37109352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 19680864 - 19680789
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||| ||||||||||||||||  || |||| ||||||||||| |||||||| |||||| ||||||||||    
T  19680864 aacccacttggattggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgatt 19680789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 8030280 - 8030162
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||| ||| |||||||||||   || |||| ||||||||||| || ||||| |||||||| ||||||||  ||    ||||||||| ||||||    
T  8030280 aacccacttggattgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttgggtggg 8030181  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  8030180 ctaatttagcttcttcaaa 8030162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 161 - 259
Target Start/End: Original strand, 51954134 - 51954232
Alignment:
Q  161 gtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||| ||| ||| |||| |||||||| || || ||||| |||||||||||| ||||||||  | ||||||||| |||||||||| ||||||||||||||    
T  51954134 gtggcattgacttgggacttgggagtatgctcctcctcgaggtctcaggtttgattatctccggtgtcaatttgggtgggctaatttagcttcttcaaa 51954232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 19238654 - 19238578
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||||||| ||||||||  || |||| ||||||||||| || ||||| ||||||| |||||||||    
T  19238654 taacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgatt 19238578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 139 - 255
Target Start/End: Original strand, 31826607 - 31826723
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtg 238  Q
    ||||||||||||||||| |||||||||||   || |||||||| ||||||| || ||||| |||||||| ||||||||  ||    ||||||||| ||||    
T  31826607 ataacccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgattccctttagtgtcaatttgggtg 31826706  T
Q  239 ggctaacttagcttctt 255  Q
    |||||| ||| ||||||    
T  31826707 ggctaatttaccttctt 31826723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 37274537 - 37274417
Alignment:
Q  140 taacccacttgggttggcctagtggta-ttaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtg 238  Q
    ||||||||||||||||||||||| ||| ||  || ||||  |||||||||| || ||||| |||||| |||||||||| |||  | ||  |||||| |||    
T  37274537 taacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtg 37274438  T
Q  239 ggctaacttagcttcttcaaa 259  Q
    |||||| ||||||||||||||    
T  37274437 ggctaatttagcttcttcaaa 37274417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 46545709 - 46545829
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtg 238  Q
    ||||||||||||||||||||||||||||||  || | ||  || ||||||| || ||||| || |||||| ||||||| |||  ||||||||||||| ||    
T  46545709 ataacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttctctgatgtcaatttagatg 46545808  T
Q  239 ggctaacttagcttcttcaaa 259  Q
    | |||| |||| || ||||||    
T  46545809 gactaatttagttttttcaaa 46545829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 37720290 - 37720171
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||| ||| ||||  || ||||  ||||||||||  | ||||| ||||| ||||||||||| ||   |   ||||||||||||||    
T  37720290 aacccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggtcccaggttcgattctcccagggatcaatttaggtggg 37720191  T
Q  241 ctaacttagcttcttcaaac 260  Q
    |||| |||||||||||||||    
T  37720190 ctaatttagcttcttcaaac 37720171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 18404959 - 18404845
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||| |||||||||  |||||||||| ||| ||||||||||| | |  || || || | |||||||||||||||||||| | |||||||||| |||||    
T  18404959 aacccatttgggttggtttagtggtattgacttgggatttgggaatatactcctcatcaatgtctcaggttcgattatctaaggtgtcaatttaagtggg 18404860  T
Q  241 ctaacttagcttctt 255  Q
     ||  ||||||||||    
T  18404859 ttagtttagcttctt 18404845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 51250598 - 51250484
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||| ||||||||  || ||||| |||||||||| ||  |||| || ||||| ||||||||  ||  | || |||||| ||||||    
T  51250598 aacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtggg 51250499  T
Q  241 ctaacttagcttctt 255  Q
    |||| ||||||||||    
T  51250498 ctaatttagcttctt 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 47044715 - 47044792
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||| ||||||| |||||||| ||| ||||| || |||| || || ||||| |||||||||||||||||    
T  47044715 ataacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgatt 47044792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 252
Target Start/End: Complemental strand, 9937038 - 9936926
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    ||||| ||||||||||||||||||||||  ||| | || ||||||||||| || ||||| | || |||||||||||| ||   | ||||||||| |||||    
T  9937038 taacctacttgggttggcctagtggtatcgacttgagacttgggagtgtgctcctcctcgaagtttcaggttcgattctcaccgttgtcaatttgggtgg 9936939  T
Q  240 gctaacttagctt 252  Q
    | ||| |||||||    
T  9936938 gttaatttagctt 9936926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 31759735 - 31759659
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||  |||||||||||  || |||| ||||||||||| || ||||| ||||||||| |||||||    
T  31759735 taacccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgatt 31759659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 259
Target Start/End: Original strand, 45060977 - 45061096
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||||||||| |||||||||||| ||| ||| ||||| |||||  || |  || || |||||  |||||||||||  ||||||||||||  |||    
T  45060977 taacccacttgggttgacctagtggtattgacttggggtttggaagtgtactcctgttcaagatctcaaattcgattatcttcgatgtcaatttaaatgg 45061076  T
Q  240 gctaacttagcttcttcaaa 259  Q
    ||||  | ||||||||||||    
T  45061077 gctagttgagcttcttcaaa 45061096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 252
Target Start/End: Complemental strand, 55427276 - 55427165
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||| ||||||||  || ||||  ||||||| || || | ||| ||||||||||||||||| ||   | || |||||| ||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctccgcggtgccaatttgggtggg 55427177  T
Q  241 ctaacttagctt 252  Q
    |||| |||||||    
T  55427176 ctaatttagctt 55427165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 2622475 - 2622396
Alignment:
Q  141 aacccacttgggttggcctagtggtattaa----ctagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||||||||    || ||||  |||||||||| || ||||| | |||||||||||||||    
T  2622475 aacccacttgggttggcctagtggtattaattggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgatt 2622396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 252
Target Start/End: Original strand, 13015444 - 13015538
Alignment:
Q  158 ctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagctt 252  Q
    |||||||||||  || |||| ||||||||||| || ||||| | |||||| |||||||| |||  | |||||||||||||||| ||| |||||||    
T  13015444 ctagtggtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtcaatttaggtgggttaatttagctt 13015538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 37443701 - 37443813
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||||||||| ||||||||||||  || ||||| |||||||   ||  ||||| |||| ||| ||||||||||||  | || ||||||| ||||    
T  37443701 taacccacttgggttgacctagtggtattggcttgggatctgggagt---gtactcctcgaggtttcatgttcgattatctctggtgccaatttatgtgg 37443797  T
Q  240 gctaacttagcttctt 255  Q
    ||||| |||| |||||    
T  37443798 gctaatttagtttctt 37443813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 27965586 - 27965538
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtg 189  Q
    ||||||||||||||||||||||||||||  || ||||| ||||||||||    
T  27965586 aacccacttgggttggcctagtggtattggcttgggatctgggagtgtg 27965538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 38869783 - 38869843
Alignment:
Q  156 gcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||  || ||||| |||||||||| || ||||| |||||||||||||||||    
T  38869783 gcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 38869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 4249177 - 4249252
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||| | |||||||||||||||   || ||||||| |||||||| || ||||| |||||||||||| ||||    
T  4249177 aacccacttcgcttggcctagtggtataggcttgggattttggagtgtgctcctcctcaaggtctcaggtttgatt 4249252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 9241103 - 9241028
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcga 214  Q
    ||||||||||||||||||||| ||||||||  || ||||| ||| |||||| || | ||| |||||| ||||||||    
T  9241103 ataacccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcctgctcgaggtctgaggttcga 9241028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 39509070 - 39509145
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||| ||  ||||| |  || ||||| |||||||||| || ||||| |||||||||||||||||    
T  39509070 aacccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgatt 39509145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 13901746 - 13901860
Alignment:
Q  145 cacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaa 244  Q
    |||||||||||| |||||||||||  || | ||  |||||||||| || ||||  |||||||| |||| ||| | |   |||| |||||||||||| |||    
T  13901746 cacttgggttggtctagtggtattggcttgagacctgggagtgtgttcctccttgaggtctcaagttcaattctatctaatgttaatttaggtgggttaa 13901845  T
Q  245 cttagcttcttcaaa 259  Q
     ||||||||||||||    
T  13901846 tttagcttcttcaaa 13901860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 24124098 - 24124052
Alignment:
Q  174 gggatttgggagtgtggtcttcctctaggtctcaggttcgattatct 220  Q
    ||||||||||||||||||| ||||  |||||| ||||||||||||||    
T  24124098 gggatttgggagtgtggtcctccttgaggtctgaggttcgattatct 24124052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 24234649 - 24234762
Alignment:
Q  145 cacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaa 244  Q
    ||||||||||| ||  ||||||||  || |||| ||||||||||| || ||||  |||||||| |||||||| |||  || ||||| |||||| ||||||    
T  24234649 cacttgggttgtccaggtggtattggcttgggacttgggagtgtgctcatcctgaaggtctcaagttcgattctctcaga-gtcaaattaggtaggctaa 24234747  T
Q  245 cttagcttcttcaaa 259  Q
     ||||||| ||||||    
T  24234748 tttagcttattcaaa 24234762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 47386808 - 47386750
Alignment:
Q  200 aggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaa 258  Q
    ||||||||||||| ||| |||    |||||||||||||||||||| |||||||||||||    
T  47386808 aggtctcaggttcaattctctctagtgtcaatttaggtgggctaatttagcttcttcaa 47386750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 30584836 - 30584783
Alignment:
Q  203 tctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttc 256  Q
    ||||||||||||||||||  ||||||||||||| || ||||| |||| ||||||    
T  30584836 tctcaggttcgattatctccgatgtcaatttagatgagctaatttagtttcttc 30584783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 30938278 - 30938177
Alignment:
Q  158 ctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttca 257  Q
    |||||||||||   | ||||| | |||||||| || ||||| ||||||||||||||||| ||    ||| ||||||||||||| ||  ||||||||||||    
T  30938278 ctagtggtattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaatttaggtgggttagtttagcttcttca 30938179  T
Q  258 aa 259  Q
    ||    
T  30938178 aa 30938177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 7292871 - 7292799
Alignment:
Q  144 ccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||| |||||||||||  || || |  |||||||||| || ||||| | |||||||||||||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgatt 7292799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 164 - 220
Target Start/End: Complemental strand, 42644963 - 42644907
Alignment:
Q  164 gtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatct 220  Q
    ||||| ||| ||||| || ||||||| |||||||| | |||||||||||||||||||    
T  42644963 gtattgacttgggatctgagagtgtgttcttcctcaaagtctcaggttcgattatct 42644907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 259
Target Start/End: Complemental strand, 41710 - 41591
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||||||||||||||||||||||  || | ||| || |||| || || ||||| ||||||||||||| ||| |||  ||||||||||| |||||    
T  41710 taacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaatttgggtgg 41611  T
Q  240 gctaacttagcttcttcaaa 259  Q
    ||||| ||||| ||||||||    
T  41610 gctaatttagcctcttcaaa 41591  T

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Target: chr2 (Bit Score: 51; Significance: 6e-20; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 29503271 - 29503388
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||||||||||||   | ||||  |||||||||| || ||||| ||||||||||||||||| ||  || |||||||||| |||||    
T  29503271 aacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcccgg-tgtcaatttaagtggg 29503369  T
Q  241 ctaacttagcttcttcaaa 259  Q
    | || ||||||||||||||    
T  29503370 caaatttagcttcttcaaa 29503388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 42327471 - 42327357
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||||||||||||  || ||||  |||||||||| || ||||| ||||||||||||||||| |||  | || |||||| ||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtggg 42327372  T
Q  241 ctaacttagcttctt 255  Q
    |||| ||||| ||||    
T  42327371 ctaatttagcatctt 42327357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 1435064 - 1435181
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||| |||||||| |  || ||||||| |||||||| |  ||||| |||||||| |||||||| |||  | ||||||||| ||||||    
T  1435064 aacccacttgggttggcatagtggtactggcttgggatttaggagtgtgcttctcctcaaggtctca-gttcgattctctctggtgtcaatttgggtggg 1435162  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  1435163 ctaatttagcttcttcaaa 1435181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 42602554 - 42602672
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||||||||||||  || ||||  |||||||||| || | ||| |||||| ||||| |||| |||  | || |||||| ||||||    
T  42602554 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtggg 42602653  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  42602654 ctaatttagcttcttcaaa 42602672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 11251087 - 11251205
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||| ||||||| ||||||||||  || |||| |||| |||||| || ||||| |||||||||||| |||| |||  | |||||||||||||| |    
T  11251087 aacccacttaggttggcttagtggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctggtgtcaatttaggtgtg 11251186  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||| ||| ||||||    
T  11251187 ctaatttaacttattcaaa 11251205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 259
Target Start/End: Original strand, 37480075 - 37480193
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||| ||||||||  || ||||  || ||||||| || ||||| ||||||||||||||||| ||   | |  |||||| ||||||    
T  37480075 aacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtggg 37480174  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  37480175 ctaatttagcttcttcaaa 37480193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 4439057 - 4438980
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||||||||| ||||||||||| ||||| || ||||||| || ||||| ||||| || ||||||||    
T  4439057 ataacccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcctcctcaaggtcgcatgttcgatt 4438980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 14500277 - 14500352
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||| ||||||||||||||| | || | ||| |||||||||| || ||||||||||||||| |||||||    
T  14500277 aacccacttggtttggcctagtggtataagcttgagatctgggagtgtgctcctcctctaggtctcagattcgatt 14500352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 28846690 - 28846805
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgg 239  Q
    |||||||||| |||||  ||||||||||| ||| ||||  |||||||||| || ||||| | ||||||||||||||||||   ||||||||||| ||| |    
T  28846690 taacccacttaggttgatctagtggtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgattatcaccgatgtcaatttgggtag 28846789  T
Q  240 gctaacttagcttctt 255  Q
     |||| ||| ||||||    
T  28846790 actaatttaacttctt 28846805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 34041664 - 34041589
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||||||||||||||| |||  |||| || ||||||| || ||||| |||||||||||| ||||    
T  34041664 aacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgatt 34041589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 39714992 - 39715067
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||| | |||||||| ||| ||||  |||||||||| || ||||| |||||||||||||||||    
T  39714992 aacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 39715067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 145 - 255
Target Start/End: Original strand, 3001383 - 3001493
Alignment:
Q  145 cacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaa 244  Q
    |||||||||||||||||||||||| ||| | ||| | |||||||| || ||||  || ||||||||||||||||||  | || || |||| |||||||||    
T  3001383 cacttgggttggcctagtggtattgacttgagatctaggagtgtgctcctccttgagatctcaggttcgattatctctggtgccagtttatgtgggctaa 3001482  T
Q  245 cttagcttctt 255  Q
     |||| |||||    
T  3001483 tttaggttctt 3001493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 25637184 - 25637269
Alignment:
Q  174 gggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||| |||||||||| || | ||| |||||||||||||| || |||  |||| ||||||||||||||||| ||| ||||||||||    
T  25637184 gggatctgggagtgtgctccttctcgaggtctcaggttcggttctctccgatgccaatttaggtgggctaatttaacttcttcaaa 25637269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 38854485 - 38854420
Alignment:
Q  194 tcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||| ||||||||||||||||||||   |  ||||||||||||||||||| ||||||||||||||    
T  38854485 tcctcaaggtctcaggttcgattatcaccggggtcaatttaggtgggctaatttagcttcttcaaa 38854420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 1729816 - 1729880
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtct 205  Q
    |||||||||||||||| |||||||||||  || |||| ||||||||||| || ||||||||||||    
T  1729816 aacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggtct 1729880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 23052600 - 23052524
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||| ||||||||| ||||||||  || |||| ||||||||||| |  ||||| |||||||||||||||||    
T  23052600 taacccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgatt 23052524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 33582015 - 33582091
Alignment:
Q  183 gagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||||| || ||||  ||||||||||||||||| |||   |||||||||||||||| |||| ||||||||||||||    
T  33582015 gagtgtgctcctccttgaggtctcaggttcgattctctctaatgtcaatttaggtggactaatttagcttcttcaaa 33582091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 40416467 - 40416391
Alignment:
Q  140 taacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||||||| ||| || |  ||||||| || || ||||  |||||||||||||||||    
T  40416467 taacccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggtctcaggttcgatt 40416391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 7799111 - 7798994
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||| ||| ||||||||  || |||| ||||||||||| || ||||| || |||||| ||||||| |||    || ||||||| || ||    
T  7799111 aacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaatttaagt-gg 7799013  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||||||||||||||    
T  7799012 ctaatttagcttcttcaaa 7798994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 16918653 - 16918579
Alignment:
Q  142 acccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||||||||||||||||||||||||   | ||||| |||||||||| || ||||| |||||| ||||| ||||    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggatt 16918579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 255
Target Start/End: Complemental strand, 21195752 - 21195638
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||| |||||||| |||||||||||   || || | ||||||||||| || ||||| |||||||||||||||||  ||    ||||||||| | ||||    
T  21195752 aacccatttgggttgccctagtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttggatggg 21195653  T
Q  241 ctaacttagcttctt 255  Q
    |||| ||||||||||    
T  21195652 ctaatttagcttctt 21195638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 251
Target Start/End: Original strand, 26545840 - 26545950
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||  | ||||||||| || ||||| ||| |||||| || | ||| |||||||| ||| |||| |||  ||| ||||||||||||||    
T  26545840 aacccacttgggttggtttggtggtattagcttgggatctggaagtgtgctccttctcgaggtctcaagtttgattctcttcgatatcaatttaggtggg 26545939  T
Q  241 ctaacttagct 251  Q
     ||| ||||||    
T  26545940 ttaatttagct 26545950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 29197452 - 29197334
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||| | |||||||| ||| |||| ||||||||||| || ||||  | |||||| |||||||| |    | || |||||||||||||    
T  29197452 aacccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctccttgatgtctcatgttcgattcttcccggtgccaatttaggtggg 29197353  T
Q  241 ctaacttagcttcttcaaa 259  Q
    |||| ||| ||| ||||||    
T  29197352 ctaatttaactttttcaaa 29197334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 11062358 - 11062435
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||| ||||  || || | ||||||||||| |  ||||| |||||||||||| ||||    
T  11062358 ataacccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgatt 11062435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 19244109 - 19244222
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||| ||| ||||||| ||| ||||  || ||||||| || ||| | ||||||||||||||||| |||  | || ||||||  |||||    
T  19244109 aacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaatttgagtggg 19244208  T
Q  241 ctaacttagcttct 254  Q
    |||| |||| ||||    
T  19244209 ctaatttagtttct 19244222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 38856185 - 38856120
Alignment:
Q  194 tcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||| |||||||| ||||||||||||| | |||| |||| | |||||||| ||||||||||||||    
T  38856185 tcctcaaggtctcatgttcgattatctacggtgtccatttcgatgggctaatttagcttcttcaaa 38856120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 5147764 - 5147680
Alignment:
Q  132 atatttcataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||| |||||||||||||||||| ||||||||||| ||| | ||| ||||||| || || | ||| ||||||| | |||||||    
T  5147764 atatttaataacccacttgggttggtctagtggtattgacttgagatctgggagtatgctccttctcaaggtctcggattcgatt 5147680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 31573656 - 31573600
Alignment:
Q  202 gtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaa 258  Q
    ||||||||||||||| |||  ||||||||||||||||| |||| ||| |||||||||    
T  31573656 gtctcaggttcgattctcttcgatgtcaatttaggtggactaatttaacttcttcaa 31573600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 35203417 - 35203341
Alignment:
Q  183 gagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||||| || ||||| | |||||| ||||||||||||  | |||||||||| ||||| ||| ||||||||||||||    
T  35203417 gagtgtgctcatcctcaaagtctcatgttcgattatctttggtgtcaatttaagtgggttaatttagcttcttcaaa 35203341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 42922414 - 42922490
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctc-taggtctcaggttcgatt 216  Q
    ||||||||||||||||||||||||||||  || || |  |||||||||| || |||||  |||||||||||||||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgatt 42922490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 220
Target Start/End: Complemental strand, 11738120 - 11738041
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatct 220  Q
    |||||||||| |||||  |||||||||| ||||| ||| || ||||||| || ||||| | || ||||||||||||||||    
T  11738120 aacccacttgagttggattagtggtattgactagagatctgagagtgtgttcctcctcaaagtttcaggttcgattatct 11738041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 35916086 - 35916189
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||| || |||||||| ||| | |||||  ||||||| || ||||| || |||||| ||||||  ||   |||||||||||| |||||    
T  35916086 aacccacttgggttggtctggtggtattgacttgagatttaagagtgtgttcctcctcaagatctcagattcgatcctcctcgatgtcaatttaagtggg 35916185  T
Q  241 ctaa 244  Q
    ||||    
T  35916186 ctaa 35916189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 13803493 - 13803587
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaattt 233  Q
    |||||||| ||||||||  |||||| ||||  || | || || |||||||| || ||||| |||||||||||||||||||||  |||| ||||||    
T  13803493 ataacccatttgggttgatctagtgatattggcttgagacttaggagtgtgctcctcctcaaggtctcaggttcgattatctctgatgccaattt 13803587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 21213777 - 21213887
Alignment:
Q  149 tgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaactta 248  Q
    |||||||| || ||||||||  || ||||  |||||||||| || ||||  ||||||||||||||||| ||   | || ||||||||||||||||  ||     
T  21213777 tgggttggtctggtggtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctccccggtgccaatttaggtgggctagtttt 21213876  T
Q  249 gcttcttcaaa 259  Q
    |||||||||||    
T  21213877 gcttcttcaaa 21213887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 2311777 - 2311842
Alignment:
Q  194 tcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||| ||||||||||||||||| |||  | |||||||||  ||||||||| || |||||||||||    
T  2311777 tcctcgaggtctcaggttcgattttcttcggtgtcaatttgagtgggctaatttggcttcttcaaa 2311842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 9776313 - 9776403
Alignment:
Q  148 ttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||| |||||||||||| ||| |||||||||   |||| || || || || ||||||||||||||||||  ||||  ||||||||||||    
T  9776313 ttgggttgacctagtggtattgacttgggatttgg--atgtgctcatcttcaagatctcaggttcgattatctctgatgctaatttaggtggg 9776403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 12994454 - 12994377
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||| |||| ||||| ||||||||||| ||| ||||  |||||||||| || ||||  |||||||| ||||||||    
T  12994454 ataacccgcttgagttggtctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgatt 12994377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 216
Target Start/End: Original strand, 32687479 - 32687556
Alignment:
Q  139 ataacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||| ||||||||||||  || |||||||||  | |||| ||| ||||||| || ||||| |||||||||||||||||    
T  32687479 ataatccacttgggttgttcttgtggtattagtttgggacttgagagtgtgttcctcctcgaggtctcaggttcgatt 32687556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 259
Target Start/End: Complemental strand, 37756046 - 37755929
Alignment:
Q  142 acccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggc 241  Q
    |||||||||||||||| | ||||||||  || ||||  ||||| |||| || | ||| |||||||| |||||| |  ||  |||| ||||||  ||||||    
T  37756046 acccacttgggttggcttggtggtattggcttgggacctgggaatgtgctcctactcgaggtctcaagttcgactccctctgatgccaatttgagtgggc 37755947  T
Q  242 taacttagcttcttcaaa 259  Q
    ||| ||||||||||||||    
T  37755946 taatttagcttcttcaaa 37755929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 37971956 - 37972013
Alignment:
Q  202 gtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||||||||||||| |||  | || ||||||||||||||||| ||||||||| ||||    
T  37971956 gtctcaggttcgattctctccggtgccaatttaggtgggctaatttagcttctacaaa 37972013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 41908673 - 41908596
Alignment:
Q  182 ggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    |||||||| || ||||| |||||||| |||||||||||   | || |||||| |||||||||  ||||||||||||||    
T  41908673 ggagtgtgctcctcctcaaggtctcaagttcgattatccccggtgccaatttgggtgggctagtttagcttcttcaaa 41908596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 139 - 167
Target Start/End: Complemental strand, 16381732 - 16381704
Alignment:
Q  139 ataacccacttgggttggcctagtggtat 167  Q
    |||||||||||||||||||||||||||||    
T  16381732 ataacccacttgggttggcctagtggtat 16381704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 33569935 - 33569859
Alignment:
Q  141 aacccacttgggttggcctagtggta-ttaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    ||||||| ||||||||| |||||||| ||  ||  ||| |||| |||||| |||||||| |||||||||||||||||    
T  33569935 aacccacatgggttggcttagtggtaattggcttaggacttggaagtgtgctcttcctcgaggtctcaggttcgatt 33569859  T

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Target: scaffold0211 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 141 - 256
Target Start/End: Original strand, 24053 - 24168
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||||||||||||||||| ||||||| ||| |||| || |||||||| || || || | || ||||||||||||||||  |||| ||||||  |||||    
T  24053 aacccacttgggttggcctaatggtattgacttgggacttaggagtgtgctcctcttcgaagtgtcaggttcgattatctctgatgccaatttgagtggg 24152  T
Q  241 ctaacttagcttcttc 256  Q
    |||| ||| |||||||    
T  24153 ctaatttaacttcttc 24168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 141 - 255
Target Start/End: Original strand, 112282 - 112396
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    ||||||||||||||||||| || |||||  || || || ||||||||||||| || |  |||||| |||||||||| |||  | || ||||||||||||     
T  112282 aacccacttgggttggcctggttgtattggcttggaatctgggagtgtggtcctctttgaggtctgaggttcgattctctccggtgccaatttaggtgga 112381  T
Q  241 ctaacttagcttctt 255  Q
    |||| ||||||||||    
T  112382 ctaatttagcttctt 112396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 13118 - 13021
Alignment:
Q  145 cacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggct 242  Q
    ||||| ||||||| | ||||||||  || | ||| |||||||||| || ||||| ||||||||||||||||| |||  ||||||||||| ||||||||    
T  13118 cacttcggttggcttggtggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctccgatgtcaatttgggtgggct 13021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 259
Target Start/End: Complemental strand, 6988 - 6880
Alignment:
Q  148 ttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaactt 247  Q
    |||||||||||||||||||||  || |||| | ||||||||| || ||||| | ||||||||||||||   ||  | |||||||||  ||||||||| ||    
T  6988 ttgggttggcctagtggtattggcttgggactggggagtgtgctcctcctcaaagtctcaggttcgat---ctctggtgtcaatttgagtgggctaattt 6892  T
Q  248 agcttcttcaaa 259  Q
    ||||||||||||    
T  6891 agcttcttcaaa 6880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 95044 - 94968
Alignment:
Q  144 ccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatct 220  Q
    |||||||||||||||||||||||||  || || |  |||||||||| || ||||| ||||||||||||| |||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatct 94968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 259
Target Start/End: Complemental strand, 42596 - 42479
Alignment:
Q  141 aacccacttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtggg 240  Q
    |||||| ||||||||||||||||||||| ||| || || ||||||| || || |||||   ||||||||||||||| |||  | || ||||||| | |||    
T  42596 aacccagttgggttggcctagtggtattgacttggaatctgggagtatgctcctcctcagagtctcaggttcgattctctttggtgccaatttaag-ggg 42498  T
Q  241 ctaacttagcttcttcaaa 259  Q
     ||| ||||||||||||||    
T  42497 ttaatttagcttcttcaaa 42479  T

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Target: scaffold0299 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 11534 - 11603
Alignment:
Q  147 cttgggttggcctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgatt 216  Q
    |||||| |||||| ||||||||  || ||||| |||||||||| || ||||| |||||||||||||||||    
T  11534 cttgggatggcctggtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgatt 11603  T

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Target: scaffold0115 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 42687 - 42622
Alignment:
Q  194 tcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttcaaa 259  Q
    ||||| || ||||| |||||||| |||| | |||||||||||||||||||| ||| ||||||||||    
T  42687 tcctcaagatctcaagttcgattctctatggtgtcaatttaggtgggctaatttaacttcttcaaa 42622  T

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Target: scaffold0471 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 8685 - 8639
Alignment:
Q  174 gggatttgggagtgtggtcttcctctaggtctcaggttcgattatct 220  Q
    ||||||||||||||||||| ||||  |||||| ||||||||||||||    
T  8685 gggatttgggagtgtggtcctccttgaggtctgaggttcgattatct 8639  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 259
Target Start/End: Complemental strand, 25406 - 25305
Alignment:
Q  158 ctagtggtattaactagggatttgggagtgtggtcttcctctaggtctcaggttcgattatctaggatgtcaatttaggtgggctaacttagcttcttca 257  Q
    |||||||||||  || | || ||||||||||| || | ||| |||||||||||||||||||||  | |||||||||   || ||||  ||||||||||||    
T  25406 ctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcaggttcgattatctctggtgtcaatttgaatgagctattttagcttcttca 25307  T
Q  258 aa 259  Q
    ||    
T  25306 aa 25305  T

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