View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19786_low_33 (Length: 479)

Name: NF19786_low_33
Description: NF19786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19786_low_33
NF19786_low_33
[»] chr5 (23 HSPs)
chr5 (14-461)||(8938745-8939192)
chr5 (86-277)||(22903000-22903190)
chr5 (83-361)||(27083148-27083424)
chr5 (242-446)||(29278862-29279066)
chr5 (119-371)||(4477138-4477388)
chr5 (119-320)||(16621148-16621345)
chr5 (98-294)||(20025202-20025397)
chr5 (169-297)||(26994580-26994709)
chr5 (147-314)||(7449760-7449925)
chr5 (181-322)||(227626-227769)
chr5 (100-247)||(19993190-19993335)
chr5 (145-278)||(25537371-25537503)
chr5 (167-297)||(30827056-30827185)
chr5 (119-437)||(19846009-19846313)
chr5 (98-237)||(26163554-26163691)
chr5 (167-297)||(22865747-22865878)
chr5 (144-245)||(25829015-25829114)
chr5 (145-233)||(31202467-31202553)
chr5 (172-279)||(25333726-25333834)
chr5 (160-224)||(26348127-26348191)
chr5 (167-345)||(32418411-32418591)
chr5 (195-297)||(24647302-24647405)
chr5 (250-288)||(34493583-34493621)
[»] chr4 (22 HSPs)
chr4 (85-433)||(10981772-10982117)
chr4 (169-366)||(47253265-47253463)
chr4 (98-323)||(19809621-19809844)
chr4 (147-279)||(12683753-12683884)
chr4 (111-316)||(26894677-26894880)
chr4 (160-278)||(29157081-29157200)
chr4 (161-247)||(15514586-15514672)
chr4 (96-235)||(3981867-3982002)
chr4 (166-236)||(13171064-13171134)
chr4 (147-247)||(15742178-15742276)
chr4 (209-277)||(19643730-19643799)
chr4 (172-319)||(1723952-1724091)
chr4 (270-401)||(3982728-3982859)
chr4 (164-344)||(14601941-14602123)
chr4 (95-287)||(19818610-19818800)
chr4 (95-161)||(40979169-40979235)
chr4 (234-315)||(17121603-17121684)
chr4 (167-297)||(5518526-5518657)
chr4 (181-240)||(16012503-16012562)
chr4 (270-361)||(39194160-39194251)
chr4 (172-278)||(2674567-2674670)
chr4 (172-297)||(50151778-50151902)
[»] chr2 (25 HSPs)
chr2 (97-366)||(45714913-45715181)
chr2 (98-364)||(45258059-45258324)
chr2 (83-279)||(12168877-12169072)
chr2 (121-314)||(17671915-17672105)
chr2 (98-279)||(19919058-19919238)
chr2 (99-288)||(27846502-27846690)
chr2 (172-297)||(3586354-3586480)
chr2 (120-314)||(17626842-17627033)
chr2 (172-298)||(36267489-36267616)
chr2 (123-264)||(36022405-36022544)
chr2 (100-296)||(12127638-12127833)
chr2 (188-279)||(24499796-24499888)
chr2 (162-274)||(20120328-20120441)
chr2 (126-312)||(27933704-27933888)
chr2 (145-236)||(29710984-29711073)
chr2 (172-247)||(18135862-18135937)
chr2 (231-314)||(23257832-23257915)
chr2 (181-247)||(15825154-15825220)
chr2 (167-299)||(24755454-24755587)
chr2 (209-294)||(44941963-44942047)
chr2 (161-296)||(10923140-10923276)
chr2 (167-314)||(12634832-12634978)
chr2 (187-314)||(17657967-17658093)
chr2 (184-247)||(18770317-18770380)
chr2 (175-215)||(31013553-31013593)
[»] chr1 (26 HSPs)
chr1 (111-403)||(43344314-43344601)
chr1 (98-298)||(5671689-5671888)
chr1 (98-361)||(5459619-5459880)
chr1 (111-295)||(18246075-18246257)
chr1 (98-298)||(33101480-33101679)
chr1 (117-297)||(34273025-34273204)
chr1 (160-279)||(26977719-26977839)
chr1 (112-314)||(8018882-8019082)
chr1 (144-297)||(16030360-16030512)
chr1 (167-328)||(2612607-2612768)
chr1 (181-297)||(16050394-16050511)
chr1 (138-279)||(22414734-22414874)
chr1 (161-272)||(12177366-12177478)
chr1 (98-371)||(2140848-2141115)
chr1 (145-247)||(14255055-14255155)
chr1 (172-247)||(25408087-25408162)
chr1 (144-247)||(48637515-48637617)
chr1 (167-279)||(52565566-52565679)
chr1 (145-246)||(4601513-4601612)
chr1 (167-228)||(3590813-3590874)
chr1 (147-247)||(23728845-23728942)
chr1 (87-139)||(23280412-23280464)
chr1 (315-443)||(18246257-18246387)
chr1 (175-213)||(30732511-30732549)
chr1 (175-276)||(1485371-1485471)
chr1 (167-296)||(23280237-23280365)
[»] chr7 (25 HSPs)
chr7 (160-461)||(9573236-9573538)
chr7 (84-297)||(29373351-29373563)
chr7 (162-298)||(9135334-9135471)
chr7 (84-276)||(21161147-21161339)
chr7 (197-437)||(12004614-12004854)
chr7 (95-246)||(13159289-13159439)
chr7 (172-263)||(7486536-7486628)
chr7 (172-279)||(26762903-26763011)
chr7 (137-297)||(5863145-5863304)
chr7 (162-279)||(12644766-12644885)
chr7 (172-272)||(9867938-9868039)
chr7 (185-297)||(43172010-43172114)
chr7 (145-297)||(13292097-13292248)
chr7 (167-263)||(39879373-39879470)
chr7 (136-247)||(16987117-16987226)
chr7 (111-297)||(2226575-2226759)
chr7 (162-228)||(5925519-5925585)
chr7 (162-275)||(10287592-10287706)
chr7 (245-314)||(25173941-25174010)
chr7 (160-228)||(18773960-18774028)
chr7 (227-297)||(16203768-16203839)
chr7 (162-199)||(12265165-12265202)
chr7 (183-247)||(5929036-5929100)
chr7 (331-371)||(16203873-16203913)
chr7 (331-371)||(16204442-16204482)
[»] chr6 (46 HSPs)
chr6 (126-297)||(9291994-9292163)
chr6 (98-345)||(34187218-34187459)
chr6 (160-294)||(9277278-9277412)
chr6 (123-320)||(10926845-10927041)
chr6 (114-314)||(22692038-22692226)
chr6 (172-264)||(25008398-25008490)
chr6 (196-371)||(34572894-34573070)
chr6 (184-297)||(19305467-19305581)
chr6 (187-298)||(10115658-10115770)
chr6 (160-297)||(20148296-20148432)
chr6 (160-297)||(22184396-22184532)
chr6 (209-366)||(3404767-3404925)
chr6 (172-297)||(18147297-18147423)
chr6 (126-294)||(2907853-2908019)
chr6 (173-297)||(15480315-15480440)
chr6 (176-247)||(19730616-19730687)
chr6 (172-272)||(689856-689957)
chr6 (98-297)||(30680911-30681109)
chr6 (127-440)||(15104111-15104406)
chr6 (182-247)||(9403173-9403238)
chr6 (190-297)||(14268440-14268549)
chr6 (227-294)||(12203615-12203683)
chr6 (175-247)||(16343573-16343645)
chr6 (145-247)||(22497323-22497423)
chr6 (246-314)||(2393458-2393523)
chr6 (184-297)||(17380100-17380214)
chr6 (172-278)||(17703724-17703830)
chr6 (167-279)||(22572031-22572143)
chr6 (183-286)||(4251029-4251133)
chr6 (148-247)||(12449608-12449705)
chr6 (167-239)||(31295568-31295640)
chr6 (162-297)||(34064176-34064312)
chr6 (241-288)||(8006938-8006984)
chr6 (234-297)||(32721169-32721231)
chr6 (234-296)||(18567366-18567428)
chr6 (172-264)||(14080475-14080567)
chr6 (209-277)||(16130996-16131065)
chr6 (167-279)||(27860940-27861053)
chr6 (84-132)||(690016-690064)
chr6 (209-371)||(11087530-11087693)
chr6 (167-247)||(12424339-12424419)
chr6 (98-134)||(14080382-14080418)
chr6 (331-371)||(14268582-14268622)
chr6 (98-134)||(20148215-20148251)
chr6 (98-134)||(22184577-22184613)
chr6 (191-247)||(23768203-23768259)
[»] chr8 (23 HSPs)
chr8 (161-362)||(18322923-18323125)
chr8 (98-345)||(26916823-26917070)
chr8 (102-297)||(30477564-30477758)
chr8 (98-246)||(23269165-23269311)
chr8 (85-279)||(17927696-17927889)
chr8 (172-297)||(13754749-13754875)
chr8 (172-294)||(23963432-23963554)
chr8 (231-433)||(37709166-37709365)
chr8 (98-277)||(15057955-15058132)
chr8 (188-277)||(6928084-6928174)
chr8 (98-246)||(1909734-1909880)
chr8 (172-297)||(3459458-3459584)
chr8 (172-278)||(24507448-24507555)
chr8 (172-288)||(13764980-13765097)
chr8 (209-279)||(17698277-17698348)
chr8 (189-279)||(21416746-21416837)
chr8 (181-247)||(24677612-24677678)
chr8 (145-234)||(17319657-17319747)
chr8 (160-200)||(14666911-14666951)
chr8 (167-247)||(24576608-24576688)
chr8 (101-202)||(23497205-23497304)
chr8 (181-238)||(5859815-5859872)
chr8 (209-264)||(24070880-24070936)
[»] scaffold0505 (1 HSPs)
scaffold0505 (98-298)||(7804-8003)
[»] scaffold0012 (1 HSPs)
scaffold0012 (175-448)||(149141-149414)
[»] scaffold0360 (1 HSPs)
scaffold0360 (172-297)||(13913-14039)
[»] scaffold0023 (1 HSPs)
scaffold0023 (169-297)||(95784-95913)
[»] chr3 (20 HSPs)
chr3 (84-298)||(2311807-2312020)
chr3 (167-297)||(9801058-9801188)
chr3 (184-277)||(17143743-17143837)
chr3 (180-278)||(21342280-21342379)
chr3 (209-277)||(28715482-28715551)
chr3 (184-278)||(30606931-30607026)
chr3 (172-297)||(12516176-12516302)
chr3 (184-297)||(16704405-16704519)
chr3 (144-239)||(21649378-21649471)
chr3 (122-297)||(30429875-30430047)
chr3 (144-297)||(14860073-14860225)
chr3 (172-293)||(8122893-8123014)
chr3 (172-265)||(9007783-9007876)
chr3 (98-261)||(28723784-28723946)
chr3 (172-279)||(431308-431416)
chr3 (145-240)||(12251954-12252047)
chr3 (244-294)||(6129500-6129550)
chr3 (172-237)||(12108410-12108475)
chr3 (95-132)||(28715621-28715658)
chr3 (252-296)||(38944618-38944662)
[»] scaffold0022 (1 HSPs)
scaffold0022 (167-314)||(69183-69329)
[»] scaffold0291 (2 HSPs)
scaffold0291 (187-297)||(15404-15515)
scaffold0291 (160-277)||(8571-8688)
[»] scaffold0205 (2 HSPs)
scaffold0205 (160-247)||(10940-11027)
scaffold0205 (172-279)||(22877-22985)
[»] scaffold0034 (1 HSPs)
scaffold0034 (120-314)||(18428-18620)
[»] scaffold0140 (1 HSPs)
scaffold0140 (167-279)||(6284-6397)
[»] scaffold0054 (1 HSPs)
scaffold0054 (180-297)||(68776-68892)
[»] scaffold0103 (1 HSPs)
scaffold0103 (163-279)||(40778-40895)
[»] scaffold0002 (2 HSPs)
scaffold0002 (187-297)||(120985-121096)
scaffold0002 (147-279)||(379684-379815)
[»] scaffold0294 (1 HSPs)
scaffold0294 (189-247)||(268-326)
[»] scaffold0005 (1 HSPs)
scaffold0005 (164-344)||(215255-215437)
[»] scaffold0057 (1 HSPs)
scaffold0057 (160-279)||(73794-73914)
[»] scaffold0074 (1 HSPs)
scaffold0074 (176-279)||(35248-35353)
[»] scaffold0092 (1 HSPs)
scaffold0092 (176-247)||(21643-21714)
[»] scaffold0174 (1 HSPs)
scaffold0174 (148-263)||(29286-29398)
[»] scaffold0380 (1 HSPs)
scaffold0380 (147-247)||(6885-6983)
[»] scaffold0013 (1 HSPs)
scaffold0013 (167-247)||(4449-4529)


Alignment Details
Target: chr5 (Bit Score: 396; Significance: 0; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 14 - 461
Target Start/End: Original strand, 8938745 - 8939192
Alignment:
Q  14 aatatcacaagatcttatgacattagataaactcaaacgagtcaatccaaacaggatcttaatgtttgttattgatctgttcgatgaggatggatgagag 113  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8938745 aatatcacaagatcttatgacattagataaactcaaacgaatcaatccaaacaggatcttaatgtttgttattgatatgttcgatgaggatggatgagag 8938844  T
Q  114 gcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtca 213  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  8938845 gcaatggtggcggaaagtgctctggtacggtggcgatgagtctttgtgcggtagaacgaaaggtgcatgcaggcacgttaacactccaatgctctagtca 8938944  T
Q  214 gtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataa 313  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8938945 gtattggaactgagaaagagtgtgtaaaaagtgtgggaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataa 8939044  T
Q  314 ctgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggtgtatgatgcacagaggcgtgctctaatgtggtatggtgcactg 413  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||    
T  8939045 ctgcctccgggatatgcggcgtgtgattagggagcggttagaggacacatgtacggtgtttgatgcacggaggcgtgctctaatgtggtacggtgcactg 8939144  T
Q  414 acgttggcgtgttccttcaggcgatgcgccttagtcagtggacgttta 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8939145 acgttggcgtgttccttcaggcgatgcgccttagtcagtggacgttta 8939192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 86 - 277
Target Start/End: Original strand, 22903000 - 22903190
Alignment:
Q  86 tgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcag 185  Q
    |||||||| ||||||||||||||||||||||| | ||||||||||||||   ||||| ||| ||||||| ||||  |||| |||| ||||||    | ||    
T  22903000 tgatctgtccgatgaggatggatgagaggcaacgttggcggaaagtgcttcagtacggtggtgatgagttttcg--cggtggaacgaaaggttttcgtag 22903097  T
Q  186 gcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaa 277  Q
    ||| ||||||||| ||| |||| |||||||| |||||||||||||||||||||| |||||| || |||||||||||||||| |||||||||||    
T  22903098 gcatgttagcacttcaacgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaa 22903190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 83 - 361
Target Start/End: Complemental strand, 27083424 - 27083148
Alignment:
Q  83 tattgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatg 182  Q
    ||||||||||| || ||||||| |||||||  ||| |||||||||| ||||| |  |||  |||||| |||||||||  ||||||||| ||| |||  ||    
T  27083424 tattgatctgtccggtgaggattgatgagaaacaacggtggcggaatgtgctctattacagtggcgaagagtcttcg--cggtagaacgaaatgtgtctg 27083327  T
Q  183 caggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattgagggtgaagcta 281  Q
    ||| ||||||||||||||||  ||| ||||||||  | ||||| ||||||||||||| ||||||| | |||||||||||||||| |||||||||||| ||    
T  27083326 cagacacgttagcactccaacactcaagtcagtaa-gaaactgtgaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagtta 27083228  T
Q  282 agtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacac 361  Q
    ||||||| ||  ||||    | ||||||||||||| |||| || | | |||||||||||||| | || ||||||||||||    
T  27083227 agtcacccttgcataggcgcgcgtgagaataactgtctccaggttttgcggcgtgtgattagagagcagttagaggacac 27083148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 242 - 446
Target Start/End: Complemental strand, 29279066 - 29278862
Alignment:
Q  242 aagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgatt 341  Q
    |||||||  ||||| ||||||||  |||||||| ||| ||||||||| ||||||||   ||| |||||||||| ||||| |||||||   ||||||||||    
T  29279066 aagtgtggaaaaagcgaatcatatcttgagggtaaagttaagtcacccttatataggcgtgtctgagaataaccgcctctgggatatggagcgtgtgatt 29278967  T
Q  342 agggtgcggttagaggacacatgtacggtgtatgatgcacagaggcgtgctctaatgtggtatggtgcactgacgttggcgtgttccttcaggcgatgcg 441  Q
    |||| ||||||||||||||  |||| | ||  | |||||| ||||||||| ||| ||||||| |||||||||||| |||||||||| ||||| | |||||    
T  29278966 agggagcggttagaggacatgtgtatgatgattaatgcacggaggcgtgccctattgtggtacggtgcactgacgctggcgtgttctttcagacaatgcg 29278867  T
Q  442 cctta 446  Q
     ||||    
T  29278866 tctta 29278862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 119 - 371
Target Start/End: Original strand, 4477138 - 4477388
Alignment:
Q  119 ggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtatt 218  Q
    ||||| ||||||||||  |||||| ||||||||||||||  |||||| | || || |||||  ||||||||||||  ||||||| |||| |||||||||     
T  4477138 ggtggtggaaagtgctccggtacggtggcgatgagtctt--tgcggtgggacgaagggtgcccgcaggcacgttaatactccaacgctcaagtcagtatg 4477235  T
Q  219 ggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcc 318  Q
    | || |||||  || ||||| ||||||||| || |||||||||  || ||| |||||||||||||||||| ||||||||   ||||||||||||| || |    
T  4477236 gtaaatgagatggaatgtgtgaaaagtgtgggagaagtgaatcggaccttgggggtgaagctaagtcacccttatataggcatgtgtgagaataattgtc 4477335  T
Q  319 tccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggtg 371  Q
     ||| || ||  |||| |||||||||  || ||| |||||||| |||||||||    
T  4477336 cccgtgagatgtggcgcgtgattaggaggccgttggaggacacgtgtacggtg 4477388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 119 - 320
Target Start/End: Original strand, 16621148 - 16621345
Alignment:
Q  119 ggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtatt 218  Q
    |||| |||||| |||| |||||| ||||||||||||||||   |||| |||| ||||||| ||| |||||||||| |||| ||| |||| || || ||||    
T  16621148 ggtgacggaaaatgctttggtacattggcgatgagtcttca--cggtggaacgaaaggtgtatgtaggcacgttaacacttcaacgctcaagccaatatt 16621245  T
Q  219 ggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcc 318  Q
    |||||||||||||||||||  |||| ||||  ||||||||||||||| ||| |||||||| ||  ||||  |||||||  | ||||||||| ||||||||    
T  16621246 ggaactgagaaagagtgtg--aaaattgtggaaaaagtgaatcataccttgggggtgaagttatctcactcttatataagtgtgtgtgagagtaactgcc 16621343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 98 - 294
Target Start/End: Original strand, 20025202 - 20025397
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    ||||||||||||||||||| | ||||||||| ||||| ||||||| || | ||||||||||  ||||| | || |||||||  ||||  ||||||| |||    
T  20025202 tgaggatggatgagaggcactagtggcggaatgtgctttggtacggtgtcaatgagtcttc--gcggtgggacgaaaggtgtctgcacacacgttaacac 20025299  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttata 294  Q
    ||||| |||   ||||| | || ||||||||||||||||||| |||||| || | |||||||||||| | ||||||||||||||| |||||| |||||    
T  20025300 tccaacgctactgtcaggaatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtgaatcattccttgagggtgaagctaggtcacccttata 20025397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 297
Target Start/End: Complemental strand, 26994709 - 26994580
Alignment:
Q  169 acaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacat 267  Q
    ||||||||||  | ||| |||||||||||||| | |||| |||||||| ||||| ||||||||||||| || || ||| || |||||||||||||||| |    
T  26994709 acaaaaggtgtcttcagacacgttagcactccgacgctcaagtcagtaatggaattgagaaagagtgtttagaaggtgttgtgaaaagtgaatcatacct 26994610  T
Q  268 tgagggtgaagctaagtcaccgttatatag 297  Q
    || ||||||||| | |||||| ||||||||    
T  26994609 tgggggtgaagcaaggtcacccttatatag 26994580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 147 - 314
Target Start/End: Original strand, 7449760 - 7449925
Alignment:
Q  147 cgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 246  Q
    |||||||||||  |||||| | || |||||||||| ||| ||||||||||||| || |||  |||||||||  ||| |||||  || ||||| |||| ||    
T  7449760 cgatgagtctt--tgcggtgggacgaaaggtgcattcagacacgttagcactctaacgcttaagtcagtatgagaaatgagattgaatgtgtgaaaaatg 7449857  T
Q  247 tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataac 314  Q
    || ||||||||||||||||||    ||||||||||||||||| |||||||    ||||||||||||||    
T  7449858 tgggaaaagtgaatcatacatcagaggtgaagctaagtcacccttatatatgcgtgtgtgagaataac 7449925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 322
Target Start/End: Complemental strand, 227769 - 227626
Alignment:
Q  181 tgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgta--aaaagtgtgagaaaagtgaatcatacattgagggtgaag 278  Q
    ||||||||||||||||||| || |||| ||| |  |||| |||||||||||||||| ||  ||||||||  ||||| |||||||||| ||  ||| ||||    
T  227769 tgcaggcacgttagcactcaaacgctcaagttaccattgaaactgagaaagagtgtatataaaaagtgtaggaaaaatgaatcatactttaggggagaag 227670  T
Q  279 ctaagtcaccgttatatagatttgtgtgagaataactgcctccg 322  Q
    |||  ||||| ||||||||   |||||||||||||| |||||||    
T  227669 ctatctcacccttatatagccgtgtgtgagaataaccgcctccg 227626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 100 - 247
Target Start/End: Complemental strand, 19993335 - 19993190
Alignment:
Q  100 aggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactc 199  Q
    |||||||| ||||||||| ||||||||||||||||  ||||||  ||   ||||||||||  |||| | | ||||||| | ||||| ||| |||||| ||    
T  19993335 aggatggacgagaggcaacggtggcggaaagtgctccggtacggagggattgagtcttcg--cggtgggaaaaaaggttcttgcagacacattagcagtc 19993238  T
Q  200 caatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    |||| ||| |||||||| |||||||||||||||| ||||  |||||||    
T  19993237 caatactcaagtcagtaatggaactgagaaagagcgtgttgaaagtgt 19993190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 278
Target Start/End: Original strand, 25537371 - 25537503
Alignment:
Q  145 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaag 244  Q
    ||||| |||||||||  |||| |||| |||||||| |||| ||||||||||||||||| |||| ||   ||| ||||||||||||||| ||||||  |||    
T  25537371 ggcgaagagtcttcg--cggtggaacgaaaggtgcctgcaagcacgttagcactccaacgctcaagattgtaatggaactgagaaagattgtgtatgaag 25537468  T
Q  245 tg-tgagaaaagtgaatcatacattgagggtgaag 278  Q
    || || |||||||||   |||| ||||||||||||    
T  25537469 tgttgtgaaaagtgatgtataccttgagggtgaag 25537503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 297
Target Start/End: Original strand, 30827056 - 30827185
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcataca 266  Q
    |||| |||||||||||||||||||||||||||| || | |  ||| |||    ||| ||||| ||| ||||||| ||||||  ||||||||||||||||     
T  30827056 gaacgaaaggtgcatgcaggcacgttagcactcaaacgttaaagtaagttccagaaatgagatagaatgtgtaataagtgtaggaaaagtgaatcatacc 30827155  T
Q  267 ttgagggtgaagctaagtcaccgttatatag 297  Q
    ||| ||||||||||||||  || ||||||||    
T  30827156 ttg-gggtgaagctaagttgcccttatatag 30827185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 437
Target Start/End: Original strand, 19846009 - 19846313
Alignment:
Q  119 ggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtatt 218  Q
    ||||| |||||||||| | ||||| ||||||||| ||| | ||  |  |||| |||||||| ||||| ||| ||||||||| ||  ||| ||||||||||    
T  19846009 ggtggtggaaagtgctctagtacggtggcgatgaatctccatgatg--gaacgaaaggtgcctgcagacacattagcactctaacactcaagtcagtatt 19846106  T
Q  219 ggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcc 318  Q
    |||||| |||||||||||| ||||||||      || || |||     ||| |||||| |||||||||||  |||||||   | ||||||||||| ||||    
T  19846107 ggaactaagaaagagtgtg-aaaaagtg------aattgcatc-----ttgggggtgatgctaagtcacccatatataggcgtatgtgagaataaatgcc 19846194  T
Q  319 tccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggtgtatgatgcacagaggcgtgctctaatgtggtatggtgcactgacgtt 418  Q
    | || || || ||| |||||||||||  ||||||| | | ||  |||||||||  ||||| |  | ||||||||||| |   ||| ||||||||||  ||    
T  19846195 ttcgtgagatgcggtgtgtgattaggaggcggttaaatggcatgtgtacggtgcttgatgtaaggtggcgtgctctagtcgagtaaggtgcactgatatt 19846294  T
Q  419 ggcgtgttccttcaggcga 437  Q
    || ||||||||||||||||    
T  19846295 ggtgtgttccttcaggcga 19846313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 98 - 237
Target Start/End: Original strand, 26163554 - 26163691
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    ||||||||||||||| ||||  ||||||||| |||||   ||||  || ||| |||||||  || | | |||| ||||||||||||| |||| |||||||    
T  26163554 tgaggatggatgagacgcaacagtggcggaatgtgctcccgtacaatgacgacgagtctt--tgggatggaacgaaaggtgcatgcatgcacattagcac 26163651  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtg 237  Q
    ||||| |||| |||||| | || |||| ||||||||||||    
T  26163652 tccaacgctcaagtcagaaatgaaactaagaaagagtgtg 26163691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 297
Target Start/End: Original strand, 22865747 - 22865878
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatac 265  Q
    |||| ||||||||||||||| |||||||||||   | |||| ||| |||| ||||||||||||| ||||||||| || || || |||||||||    |||    
T  22865747 gaacgaaaggtgcatgcaggtacgttagcactttgacgctcaagttagtaatggaactgagaaaaagtgtgtaagaaatgttgtgaaaagtgatgtgtac 22865846  T
Q  266 attgagggtgaagctaagtcaccgttatatag 297  Q
     ||||||||||||| |  ||||| ||||||||    
T  22865847 cttgagggtgaagcaagttcacccttatatag 22865878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 144 - 245
Target Start/End: Complemental strand, 25829114 - 25829015
Alignment:
Q  144 tggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaa 243  Q
    ||||||| ||||||||  |||| |||||||| ||| || |||||||||||||| ||  | |||||||||| || ||||| ||||||| ||||||||| ||    
T  25829114 tggcgataagtcttcg--cggttgaacaaaatgtgtattcaggcacgttagcaatctgacgctctagtcaataatggaattgagaaaaagtgtgtaagaa 25829017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 31202553 - 31202467
Alignment:
Q  145 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagag 233  Q
    |||||||||||||||  |||| ||||| || |||| | |||| ||||||||| ||| | |||| |||||||||||||||||||| ||||    
T  31202553 ggcgatgagtcttcg--cggtggaacagaaagtgcctacaggaacgttagcattccgacgctcaagtcagtattggaactgagagagag 31202467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 279
Target Start/End: Original strand, 25333726 - 25333834
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattga 270  Q
    |||||| | ||||||||  |||| ||||| | |||| |||||||| || |||| ||| |||||||||| ||||||| |  ||||||||||||||| ||||    
T  25333726 aaaggtacttgcaggcatattagtactccgacgctcaagtcagtaatgtaactaagagagagtgtgtagaaagtgttgttaaaagtgaatcatactttga 25333825  T
Q  271 gggtgaagc 279  Q
    | |||||||    
T  25333826 gagtgaagc 25333834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 26348191 - 26348127
Alignment:
Q  160 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaact 224  Q
    |||||| |||| |||||||  |||||||||||||||||||||| |||| ||||| || |||||||    
T  26348191 tgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcattaatggaact 26348127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 345
Target Start/End: Complemental strand, 32418591 - 32418411
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatac 265  Q
    |||| ||||| || ||||||||||| | |||||  | |||| ||||| |  |||||| ||||||||||||||| | |||| || ||| ||||||||||||    
T  32418591 gaacgaaaggagcctgcaggcacgtcaacactctgacgctcaagtcactgatggaacagagaaagagtgtgtagagagtgttgtgaagagtgaatcatac 32418492  T
Q  266 attgagggtgaagctaagtcaccgttatatagatttgtg-tgagaataactgcctccgggatatacggcgtgtgattaggg 345  Q
     |||||| |||||| |  ||||| || ||||||  || | | ||  |||||| ||||||| ||| ||||||||||||||||    
T  32418491 cttgaggatgaagcaagttcacccttgtatagacgtgcgttaagcttaactgtctccgggttatgcggcgtgtgattaggg 32418411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 24647302 - 24647405
Alignment:
Q  195 cactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttat 293  Q
    |||||||| |||| | |||||| ||||||||| ||||||||||||| ||||| || |||||||||   |||| || |||||||||| |  ||||| ||||    
T  24647302 cactccaacgctcaattcagtaatggaactgaaaaagagtgtgtaagaagtgttgtgaaaagtgatgtataccttaagggtgaagcaagttcacccttat 24647401  T
Q  294 atag 297  Q
    ||||    
T  24647402 atag 24647405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 288
Target Start/End: Original strand, 34493583 - 34493621
Alignment:
Q  250 gaaaagtgaatcatacattgagggtgaagctaagtcacc 288  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  34493583 gaaaagtgaatcataccttgagggtgaaactaagtcacc 34493621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 134; Significance: 1e-69; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 85 - 433
Target Start/End: Original strand, 10981772 - 10982117
Alignment:
Q  85 ttgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgca 184  Q
    ||||||||| |||||||||||||||||||||||   ||| |||| |||||   ||||| ||  ||||||||||||  | || | || |||||||| ||||    
T  10981772 ttgatctgtccgatgaggatggatgagaggcaacaatggtggaatgtgctccagtacggtgatgatgagtcttcg--cagtgggacgaaaggtgcctgca 10981869  T
Q  185 ggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagt 284  Q
    |  ||||| |||||||||  ||| |||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||| ||| ||| ||||||    
T  10981870 gcaacgttggcactccaacactcaagtcagtaatggaaccgagaaagagtgtgtaaaaagtgtgggaaaagtgaatcatacattg-gggagaaactaagt 10981968  T
Q  285 caccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggtgtatgatgcacaga 384  Q
    |||| |||||||||  |||||||||||||| ||||||||||||| |||| ||||||||||| |||||||||||||||||||| ||||  ||| ||||  |    
T  10981969 cacccttatatagacgtgtgtgagaataaccgcctccgggatatgcggcttgtgattagggagcggttagaggacacatgtatggtgattgacgcacgaa 10982068  T
Q  385 ggcgtgctctaatgtggtatggtgcactgacgttggcgtgttccttcag 433  Q
    ||||||||||||||||| | ||||| | || | || | |||||||||||    
T  10982069 ggcgtgctctaatgtgggacggtgcgccgaagctgacatgttccttcag 10982117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 169 - 366
Target Start/End: Original strand, 47253265 - 47253463
Alignment:
Q  169 acaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacat 267  Q
    ||||||||||| |||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| || |||||||||||||||| |    
T  47253265 acaaaaggtgcttgcaggcatgttagcactccaacgctcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgttgtgaaaagtgaatcatacct 47253364  T
Q  268 tgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgta 366  Q
    ||||||||||||||||||||| ||||||||    |  ||| |||||||| ||||||| | | ||| |||||||||| | ||  ||||||||||||||||    
T  47253365 tgagggtgaagctaagtcacccttatataggcgcgcatgataataactgtctccgggttttgcggtgtgtgattagagagcaattagaggacacatgta 47253463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 98 - 323
Target Start/End: Original strand, 19809621 - 19809844
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    ||||||||||| | |||||| ||||| |||| ||||| ||||||| || |||||||||||||  |||| || | |||||| | ||||| || ||||||||    
T  19809621 tgaggatggataaaaggcaacggtggtggaatgtgctctggtacggtgacgatgagtcttcg--cggttga-cgaaaggttcctgcagacatgttagcac 19809717  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatata 296  Q
    ||||| |||| |||||||| || |||| |||||||||||||| |||||| || ||||||||||| |||| ||||||||||| |||||||||| ||| |||    
T  19809718 tccaacgctcaagtcagtaatgaaactaagaaagagtgtgtagaaagtgttgtgaaaagtgaattataccttgagggtgaaactaagtcacccttacata 19809817  T
Q  297 gatttgtgtgagaataactgcctccgg 323  Q
    |    | ||||||||||||| ||||||    
T  19809818 ggcgcgcgtgagaataactgtctccgg 19809844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 147 - 279
Target Start/End: Original strand, 12683753 - 12683884
Alignment:
Q  147 cgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 246  Q
    |||||||||||  |||||| |||| |||||||| |||||||||||||||||||||| |||| ||| |||| || ||||||||||||||||||| ||||||    
T  12683753 cgatgagtctt--tgcggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagttagtaatgaaactgagaaagagtgtgtagaaagtg 12683850  T
Q  247 -tgagaaaagtgaatcatacattgagggtgaagc 279  Q
     || |||||||||||||||| || ||||||||||    
T  12683851 ttgtgaaaagtgaatcataccttaagggtgaagc 12683884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 111 - 316
Target Start/End: Complemental strand, 26894880 - 26894677
Alignment:
Q  111 gaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctag 210  Q
    ||||||| | || |||||||||||  |||||| |||||  |||||||| ||  || | || ||||||||||||| ||| ||| || |||  | |||| ||    
T  26894880 gaggcaacgatgtcggaaagtgcttcggtacggtggcggcgagtcttcatg--gtgggacgaaaggtgcatgcatgcatgttggctctctgacgctcaag 26894783  T
Q  211 tcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaa 310  Q
    ||||| | |||| |||||| |||||| |||||||||||||||||||||||| ||| |||||||| |||  | |||||  ||||||||   ||||||||||    
T  26894782 tcagtttaggaaatgagaaggagtgtttaaaaagtgtgagaaaagtgaatcgtaccttgagggttaagaaatgtcacacttatataggcgtgtgtgagaa 26894683  T
Q  311 taactg 316  Q
    ||||||    
T  26894682 taactg 26894677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 160 - 278
Target Start/End: Original strand, 29157081 - 29157200
Alignment:
Q  160 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtga 258  Q
    |||||| |||| |||||||||||||| |||||| ||||||||| |||| ||| |||| ||||||||||||| ||||||||  ||||| || | |||||||    
T  29157081 tgcggtggaacgaaaggtgcatgcagacacgtttgcactccaacgctcaagttagtaatggaactgagaaaaagtgtgtagtaagtgttgtgtaaagtga 29157180  T
Q  259 atcatacattgagggtgaag 278  Q
    | ||||| |||| |||||||    
T  29157181 accataccttgatggtgaag 29157200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 15514672 - 15514586
Alignment:
Q  161 gcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    ||||| |||| || ||||| || ||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||||| ||||||    
T  15514672 gcggtggaacgaagggtgcctgtaggcacgttagcactccaacgctcaagtcagtaatggaactgaaaaagagtgtgtaagaagtgt 15514586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 96 - 235
Target Start/End: Original strand, 3981867 - 3982002
Alignment:
Q  96 gatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagc 195  Q
    |||||||||||||||||||||| ||||||||||| || |  |||||  ||  |||||||||||   |||| |||| ||||||||||||| ||||||||||    
T  3981867 gatgaggatggatgagaggcaacggtggcggaaaatgttccggtacagtgaggatgagtcttc--acggtggaacgaaaggtgcatgcatgcacgttagc 3981964  T
Q  196 actccaatgctctagtcagtattggaactgagaaagagtg 235  Q
    |||||||  ||| ||||  || ||||||||| ||||||||    
T  3981965 actccaacactcaagtc--taatggaactgaaaaagagtg 3982002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 13171064 - 13171134
Alignment:
Q  166 agaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgt 236  Q
    ||||| |||||||| ||||||||||||||||||||||  ||| |||||||| |||||||||| ||||||||    
T  13171064 agaacgaaaggtgcttgcaggcacgttagcactccaactctcaagtcagtaatggaactgagcaagagtgt 13171134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 247
Target Start/End: Complemental strand, 15742276 - 15742178
Alignment:
Q  147 cgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 246  Q
    |||||||||||||||  || || | |||||||| ||| |||||||||||||||  | |||| |||||||| ||||||||||||| ||||||||| |||||    
T  15742276 cgatgagtcttcgtg--gtggagcgaaaggtgcctgctggcacgttagcactcttacgctcaagtcagtaatggaactgagaaaaagtgtgtaagaagtg 15742179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 19643730 - 19643799
Alignment:
Q  209 agtcagtattggaactgagaaagagtgtgtaaaaagt-gtgagaaaagtgaatcatacattgagggtgaa 277  Q
    |||||||| |||||||||||||||||||||| |||||  || |||||||||||||||| |||||||||||    
T  19643730 agtcagtaatggaactgagaaagagtgtgtagaaagtcttgtgaaaagtgaatcataccttgagggtgaa 19643799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 172 - 319
Target Start/End: Original strand, 1723952 - 1724091
Alignment:
Q  172 aaaggtgcatgcaggca-cgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattga 270  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||| |||| |||||  || |||||         |||||||||||||||||| |||     
T  1723952 aaaggtgcatgcagacaacgttagcactccaatgctcaagtcagtataggaaatgagatggaatgtgt---------gagaaaagtgaatcataccttgg 1724042  T
Q  271 gggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcct 319  Q
     | ||||||||| ||||| |||||||| | |||||||||| ||| ||||    
T  1724043 agatgaagctaaatcaccattatataggtgtgtgtgagaacaaccgcct 1724091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 401
Target Start/End: Original strand, 3982728 - 3982859
Alignment:
Q  270 agggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacgg 369  Q
    ||||||||||||||||||| || |||||   |||||| ||||||| ||||||  ||||| | |||||||||||||| | | ||||||||| | |||| ||    
T  3982728 agggtgaagctaagtcacccttctataggcgtgtgtgggaataaccgcctccaagatatgcagcgtgtgattagggagtgattagaggacgcgtgtatgg 3982827  T
Q  370 tgtatgatgcacagaggcgtgctctaatgtgg 401  Q
    ||  ||||| | ||||| || |||||||||||    
T  3982828 tgattgatgtatagaggtgtactctaatgtgg 3982859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 344
Target Start/End: Complemental strand, 14602123 - 14601941
Alignment:
Q  164 gtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatca 262  Q
    ||||||| |||| ||  |||||||||||||||| ||||| |||| |||||||| || |||||| | ||||||||||| ||||| || ||||||||         
T  14602123 gtagaacgaaagttgtctgcaggcacgttagcaatccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtgttgtg 14602024  T
Q  263 tacattgagggtgaagctaagtcaccgttatatagatttgtg-tgagaataactgcctccgggatatacggcgtgtgattagg 344  Q
    ||| ||||||||||||| |  ||| | ||||||||   |||| |||  ||||||| ||||||| ||| |||||||||||||||    
T  14602023 taccttgagggtgaagcaagttcatccttatatagccgtgtgttgatcataactgtctccgggttatgcggcgtgtgattagg 14601941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 287
Target Start/End: Original strand, 19818610 - 19818800
Alignment:
Q  95 cgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttag 194  Q
    |||||||||||||| | |||||| ||||| |||| ||||| ||||||| || ||||||||||||  ||||| | || |||||| | | |||  | |||||    
T  19818610 cgatgaggatggataaaaggcaacggtggtggaatgtgctctggtacggtgacgatgagtcttc--gcggt-ggacgaaaggttcctacagatatgttag 19818706  T
Q  195 cactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcac 287  Q
    |||||||| |||| |||||||| |  |||  |  ||||||||||| |||||| || ||||||||||| |||| |||| | |||| |||||||||    
T  19818707 cactccaacgctcaagtcagtacttaaaccaatcaagagtgtgtagaaagtgttgtgaaaagtgaattataccttgatgatgaaactaagtcac 19818800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 95 - 161
Target Start/End: Complemental strand, 40979235 - 40979169
Alignment:
Q  95 cgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtg 161  Q
    ||||||||||||||||||||||||||| | |||||||||| ||||| | ||| ||||||||| ||||    
T  40979235 cgatgaggatggatgagaggcaatggtagtggaaagtgctctggtatggtggtgatgagtctccgtg 40979169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 234 - 315
Target Start/End: Complemental strand, 17121684 - 17121603
Alignment:
Q  234 tgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataact 315  Q
    ||||| ||||||||| ||||||||||| |||| ||| |||||||| ||| ||||| |||||||||  |||||| ||||||||    
T  17121684 tgtgtgaaaagtgtgggaaaagtgaataataccttgggggtgaagttaaatcacccttatatagacgtgtgtgtgaataact 17121603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 297
Target Start/End: Original strand, 5518526 - 5518657
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatac 265  Q
    |||| |||||||  ||||| |||||||||||| ||| |||| |||||||| | ||||||||| ||| ||||||| ||||| || | |||||||  | |||    
T  5518526 gaacgaaaggtgagtgcagacacgttagcacttcaacgctcaagtcagtaattgaactgagagagaatgtgtaagaagtgttgtggaaagtgatgcgtac 5518625  T
Q  266 attgagggtgaagctaagtcaccgttatatag 297  Q
     ||||||||||||| |  ||||| ||||||||    
T  5518626 cttgagggtgaagcaagttcacccttatatag 5518657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 16012562 - 16012503
Alignment:
Q  181 tgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaa 240  Q
    ||||||||||||| |||||| | |||| |||||||| ||||||||||| |||||||||||    
T  16012562 tgcaggcacgttaacactccgacgctcaagtcagtaatggaactgagatagagtgtgtaa 16012503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 361
Target Start/End: Original strand, 39194160 - 39194251
Alignment:
Q  270 agggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacac 361  Q
    |||||||| |||||||||| |||||||| |    ||||||||||| | |||||  ||||  ||||||||||||||| |||||||||||||||    
T  39194160 agggtgaaactaagtcacccttatataggtgcacgtgagaataaccgtctccgaaatatgtggcgtgtgattagggagcggttagaggacac 39194251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 2674670 - 2674567
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattga 270  Q
    ||||||| |||||| || ||||||||||||| || | ||||| || || ||||||||    ||||||| ||||||| | |||||||||||||||| ||||    
T  2674670 aaaggtgtatgcagtcatgttagcactccaacgcacaagtcaataatgtaactgaga----gtgtgtagaaagtgttgtgaaaagtgaatcataccttga 2674575  T
Q  271 gggtgaag 278  Q
    || |||||    
T  2674574 ggatgaag 2674567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 172 - 297
Target Start/End: Complemental strand, 50151902 - 50151778
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaa-aagtgtgagaaaagtgaatcatacattga 270  Q
    ||||||||||| |||||||| |||||||| | | ||  ||||||||  ||| |||||  ||||||||||  ||| ||| |||| || |||||||| ||||    
T  50151902 aaaggtgcatgtaggcacgtcagcactccgacgatcatgtcagtataagaaatgagag-gagtgtgtaaggaagcgtgggaaa-gtaaatcataccttga 50151805  T
Q  271 gggtgaagctaagtcaccgttatatag 297  Q
    ||||||||| |||||||| ||||||||    
T  50151804 gggtgaagcaaagtcacccttatatag 50151778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 8e-59; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 97 - 366
Target Start/End: Original strand, 45714913 - 45715181
Alignment:
Q  97 atgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagca 196  Q
    ||||||||||||||| |||||   ||||||||||||||  ||||| |||||||||||||||| ||  || |||| |||||||||||||||||||||||||    
T  45714913 atgaggatggatgagtggcaacaatggcggaaagtgctccggtacattggcgatgagtcttcctg--gtggaacgaaaggtgcatgcaggcacgttagca 45715010  T
Q  197 ctccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatat 295  Q
    |||||| |||| |||||||| || ||||||||||||||||||||||||||| | ||||| |||||||||| |||| ||||||||||||||||| || |||    
T  45715011 ctccaacgctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgtggtgaaaattgaatcataccttgaaggtgaagctaagtcacccttgtat 45715110  T
Q  296 agatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgta 366  Q
    |     | ||||||||||||| ||| | |||||  ||||||||||||| | || |||||||||||||||||    
T  45715111 aagcacgcgtgagaataactgtctctgagatatgtggcgtgtgattagagagcagttagaggacacatgta 45715181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 98 - 364
Target Start/End: Complemental strand, 45258324 - 45258059
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    |||||||||||||||||||| ||||  ||||| |||| || || | ||||||||||||||||  |||| |||| |||| ||  ||||||||||||| |||    
T  45258324 tgaggatggatgagaggcaacggtgatggaaaatgctttgatatggtggcgatgagtcttcg--cggtggaacgaaagatgtctgcaggcacgttaacac 45258227  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatata 296  Q
    ||||| |||| ||| |||| || |||| ||||||| |||||  ||||||| | |||||||||||||||| ||||||||||||| |||||||| |||||||    
T  45258226 tccaaagctcaagtaagtaatgaaactaagaaagaatgtgtcgaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaaagtcacccttatata 45258127  T
Q  297 gatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatg 364  Q
    | |    ||||  ||||| | ||||| | | | |||||||||||||||| ||||||||||||||||||    
T  45258126 ggtcctcgtgacgataaccgtctccgagttttgcggcgtgtgattagggagcggttagaggacacatg 45258059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 83 - 279
Target Start/End: Original strand, 12168877 - 12169072
Alignment:
Q  83 tattgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatg 182  Q
    ||||||| ||| || ||| ||||||||||||||||  |||||||||| ||||  ||||| | |||||| ||||||  |||||| |||| |||||||  ||    
T  12168877 tattgatatgtccggtgaagatggatgagaggcaacagtggcggaaaatgctccggtacct-ggcgataagtctt--tgcggtggaacgaaaggtgtctg 12168973  T
Q  183 caggcacgttagcactccaatgct-ctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagc 279  Q
    ||||||| ||| |||||||| ||| | |||||||| ||||||| |||||||||||||| |||||| || ||||||||||| |||| |||||||||||||    
T  12168974 caggcacattaacactccaacgcttcaagtcagtaatggaactaagaaagagtgtgtagaaagtgttgtgaaaagtgaattataccttgagggtgaagc 12169072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 121 - 314
Target Start/End: Original strand, 17671915 - 17672105
Alignment:
Q  121 tggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattgg 220  Q
    |||||||||||||| ||||||  ||||||||||||||| ||  || |||| |||||||  ||||| ||||||||| ||||||||||| | ||||| | ||    
T  17671915 tggcggaaagtgctctggtacagtggcgatgagtcttcatg--gtggaacgaaaggtgtctgcagacacgttagcgctccaatgctcaaatcagtgtagg 17672012  T
Q  221 aactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataac 314  Q
    || |||||  || | ||| ||||||||| |||||||||||||||| ||| |||||||||||||||||| ||| ||||   ||| ||||||||||    
T  17672013 aaatgagatggaatttgtgaaaagtgtgggaaaagtgaatcataccttg-gggtgaagctaagtcacccttaaataggcgtgtatgagaataac 17672105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 98 - 279
Target Start/End: Complemental strand, 19919238 - 19919058
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    |||| |||||||||||||||||||||| |||||||||  |||| | ||||||| |||||||||  ||| |||| |||||||| |||||| || |||| ||    
T  19919238 tgagaatggatgagaggcaatggtggcagaaagtgctccggtatggtggcgatcagtcttcgt--ggtggaacgaaaggtgcctgcaggaacattagaac 19919141  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagc 279  Q
    || || ||   ||||| || ||||| ||||||||||| |||| |||||| || |||||||||||||||| |||||| ||||||    
T  19919140 tctaacgccaaagtcaataatggaaatgagaaagagtatgtagaaagtgttgtgaaaagtgaatcataccttgaggatgaagc 19919058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 99 - 288
Target Start/End: Complemental strand, 27846690 - 27846502
Alignment:
Q  99 gaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcact 198  Q
    |||||||||||||||||||  ||| ||||| ||| |  |||||| |||| |||||||||||  | || | || ||| |||| ||||||||||||||||||    
T  27846690 gaggatggatgagaggcaacagtgacggaatgtgttccggtacggtggcaatgagtcttcg--cagttggacgaaaagtgcctgcaggcacgttagcact 27846593  T
Q  199 ccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcacc 288  Q
    |||| | || |||||||| ||||||||||||| ||| |||| |||||| || | |||||||||  ||| |||||||||||| |||||||||    
T  27846592 ccaacgatcaagtcagtaatggaactgagaaacagtttgtagaaagtgttgtgtaaagtgaattgtaccttgagggtgaagttaagtcacc 27846502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 172 - 297
Target Start/End: Original strand, 3586354 - 3586480
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    |||||||||||| |||||||||| ||||| | |||| |||||||| ||||||||||||| |||| ||| |||||| || |||||||||||||||| ||||    
T  3586354 aaaggtgcatgccggcacgttaggactccgacgctcaagtcagtaatggaactgagaaaaagtgagtagaaagtgttgtgaaaagtgaatcataccttga 3586453  T
Q  271 gggtgaagctaagtcaccgttatatag 297  Q
    ||||||||| |  ||||| ||||||||    
T  3586454 gggtgaagcaagttcacccttatatag 3586480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 120 - 314
Target Start/End: Original strand, 17626842 - 17627033
Alignment:
Q  120 gtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattg 219  Q
    ||||||||||||||| ||||||  ||||||||||||||  ||  || |||| |||||||  ||||| ||||||||| ||||||||||| | ||||| | |    
T  17626842 gtggcggaaagtgctttggtacagtggcgatgagtctttatg--gtggaacgaaaggtgtctgcagacacgttagctctccaatgctcaaatcagtgtag 17626939  T
Q  220 gaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataac 314  Q
    ||| |||||  || | ||| |||||||||  ||||||||||||||| ||| |||||||||||||||||| ||| ||||   ||| ||||||||||    
T  17626940 gaaatgagatggaatctgtgaaaagtgtggaaaaagtgaatcataccttg-gggtgaagctaagtcacccttaaataggcgtgtatgagaataac 17627033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 172 - 298
Target Start/End: Original strand, 36267489 - 36267616
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    |||||||| |||| ||| |||| |||||||| |||| |||||||| || ||||||||||||||||||| |||| | || |||||||||||||||| ||||    
T  36267489 aaaggtgcctgcatgcatgttaacactccaacgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagggttgtgaaaagtgaatcataccttga 36267588  T
Q  271 gggtgaagctaagtcaccgttatataga 298  Q
    ||||||||| |  ||||| |||||||||    
T  36267589 gggtgaagcaagttcacccttatataga 36267616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 123 - 264
Target Start/End: Original strand, 36022405 - 36022544
Alignment:
Q  123 gcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaa 222  Q
    ||||||||| || || |||| |||| ||||||||| ||   ||||||| ||||||  ||| |||||||||| ||||| || |||| |||||||||||  |    
T  36022405 gcggaaagttctctgatacggtggcaatgagtctttgta--gtagaacgaaaggtatatgtaggcacgttaacactctaacgctcaagtcagtattgaga 36022502  T
Q  223 ctgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcata 264  Q
    |||||||||||| ||||||||||||||| |||||||||||||    
T  36022503 ctgagaaagagtttgtaaaaagtgtgagcaaagtgaatcata 36022544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 100 - 296
Target Start/End: Complemental strand, 12127833 - 12127638
Alignment:
Q  100 aggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactc 199  Q
    ||||| ||||||||||||   |||| |||| ||||  |||||| ||| |||| |||||||  |||| | || |||||| | |||||||||||||||||||    
T  12127833 aggatagatgagaggcaacattggcagaaaatgcttcggtacggtggtgatgggtcttcg--cggtgggacgaaaggtacctgcaggcacgttagcactc 12127736  T
Q  200 caatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatata 296  Q
    ||| |||| |||||||| || |||| |||| | ||||||| |||||| || |||||||||||||||| |||  |||||||| | |||| | |||||||    
T  12127735 caacgctcaagtcagtaatgaaactaagaacgtgtgtgtagaaagtgttgtgaaaagtgaatcatactttggtggtgaagcaatgtcaaccttatata 12127638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 188 - 279
Target Start/End: Original strand, 24499796 - 24499888
Alignment:
Q  188 acgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagc 279  Q
    ||||||||||||||| |||| |||||||| ||||| |||||||||||||||| ||| || || |||||||||||||||| || ||||||||||    
T  24499796 acgttagcactccaacgctcaagtcagtaatggaaatgagaaagagtgtgtagaaaatgttgtgaaaagtgaatcataccttaagggtgaagc 24499888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 162 - 274
Target Start/End: Original strand, 20120328 - 20120441
Alignment:
Q  162 cggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagt-gtgagaaaagtgaat 260  Q
    |||| |||| |||||||  |||||||||||||||||||| |  ||| |||||||| || ||||||||||||||||||  ||||| ||| || ||||||||    
T  20120328 cggtggaacgaaaggtgtctgcaggcacgttagcactccgactctcaagtcagtaatgaaactgagaaagagtgtgtggaaagtggtgtgataagtgaat 20120427  T
Q  261 catacattgagggt 274  Q
    ||||| ||||||||    
T  20120428 cataccttgagggt 20120441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 126 - 312
Target Start/End: Complemental strand, 27933888 - 27933704
Alignment:
Q  126 gaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactg 225  Q
    ||||||||| ||||||| ||| |||| |||||||  |||| | | ||||| ||  || |||||| |||||||| |||||||| ||| |||||  ||| ||    
T  27933888 gaaagtgctttggtacggtggtgatgtgtcttcg--cggtgggataaaagatgtttgtaggcacattagcacttcaatgctcaagtaagtatgagaaatg 27933791  T
Q  226 agaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaata 312  Q
    |||  ||   ||| ||||||||| |||||||||||||||| |||  ||||||| ||||| ||| |||||||||  ||||||||||||    
T  27933790 agatggaacatgtgaaaagtgtgggaaaagtgaatcataccttggaggtgaagttaagttacctttatatagacgtgtgtgagaata 27933704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 29710984 - 29711073
Alignment:
Q  145 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgt 236  Q
    ||||||| |||||||  |||| |||||||||||| ||||| ||||||||||||||||| |||| ||||| || ||||| ||| | |||||||    
T  29710984 ggcgatgcgtcttcg--cggtggaacaaaaggtgtatgcatgcacgttagcactccaacgctcaagtcactaatggaattgaaagagagtgt 29711073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 18135862 - 18135937
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    |||||||| || ||||||||||| ||||  | |||| ||| |||| ||||||||||||||||||||||| ||||||    
T  18135862 aaaggtgcctgtaggcacgttagtactctgacgctcaagttagtaatggaactgagaaagagtgtgtaagaagtgt 18135937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 23257832 - 23257915
Alignment:
Q  231 gagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataac 314  Q
    ||||||||| |||||||| |||||||||||  ||| ||||||||||| | | |||||| ||||||||   ||||||||||||||    
T  23257832 gagtgtgtagaaagtgtgggaaaagtgaattgtaccttgagggtgaatcaaggtcacccttatataggcgtgtgtgagaataac 23257915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 15825154 - 15825220
Alignment:
Q  181 tgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    ||||||||||||||||||   | |||| |||| ||| |||||||||||||||||||||| |||||||    
T  15825154 tgcaggcacgttagcactttgacgctcaagtcggtaatggaactgagaaagagtgtgtagaaagtgt 15825220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 299
Target Start/End: Original strand, 24755454 - 24755587
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatac 265  Q
    |||| |||| ||||| || ||||||||| |||||||  ||| |||||||  |||||||  |||| |||||||| ||| ||| | |||||||||||| |||    
T  24755454 gaacgaaagttgcatacaagcacgttagtactccaaccctcaagtcagtgatggaactctgaaaaagtgtgtagaaattgttgtgaaaagtgaatcgtac 24755553  T
Q  266 attgagggtgaagctaagtcaccgttatatagat 299  Q
     || | | ||||||||||||||  ||||||||||    
T  24755554 ctttaagatgaagctaagtcacttttatatagat 24755587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 294
Target Start/End: Original strand, 44941963 - 44942047
Alignment:
Q  209 agtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttata 294  Q
    |||| |||| |||| |||||| ||||| |||| ||||||  |||||| ||||||||| ||| |||||||||||||||||| |||||    
T  44941963 agtcggtatgggaaatgagaaggagtgcgtaacaagtgtaggaaaagcgaatcatactttg-gggtgaagctaagtcacccttata 44942047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 296
Target Start/End: Complemental strand, 10923276 - 10923140
Alignment:
Q  161 gcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaa 259  Q
    ||||| |||| ||||||| ||| |||||||||| |||||| |  ||| |||||||  ||||||| | |||||||||||| |||||| || ||||||||||    
T  10923276 gcggtggaacgaaaggtgtatgtaggcacgttatcactccgacactcaagtcagttatggaacttataaagagtgtgtagaaagtgctgtgaaaagtgaa 10923177  T
Q  260 tcatacattgagggtgaagctaagtcaccgttatata 296  Q
       | | ||||||||||||| |  ||||| |||||||    
T  10923176 gtgtgccttgagggtgaagcaagttcacccttatata 10923140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 314
Target Start/End: Original strand, 12634832 - 12634978
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcataca 266  Q
    |||| |||||||||||||||||||||| ||||||||  ||  ||||||| | |||| |||||  || ||||| |||||||||  |||||| ||| || |     
T  12634832 gaacgaaaggtgcatgcaggcacgttaacactccaactcttaagtcagtgtaggaaatgagatggaatgtgtgaaaagtgtggaaaaagtaaataatccc 12634931  T
Q  267 ttgagggtgaagctaagtcaccgttatatagatttgtgtgagaataac 314  Q
    ||| | || ||||||||||||| || ||||    ||||||||||||||    
T  12634932 ttg-gcgttaagctaagtcacccttgtataagcgtgtgtgagaataac 12634978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 314
Target Start/End: Original strand, 17657967 - 17658093
Alignment:
Q  187 cacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtca 286  Q
    ||||||||| ||||||||||| | | ||| | |||| |||||  || | | | ||||||| | |||||||||||||||| ||| ||||||||||||||||    
T  17657967 cacgttagcgctccaatgctcaaattagtgtaggaaatgagatggaatctatgaaaagtgcgggaaaagtgaatcataccttg-gggtgaagctaagtca 17658065  T
Q  287 ccgttatatagatttgtgtgagaataac 314  Q
    || ||| ||||   ||| ||||||||||    
T  17658066 cccttaaataggcgtgtatgagaataac 17658093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 247
Target Start/End: Original strand, 18770317 - 18770380
Alignment:
Q  184 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    ||||||||||||||||  | |||| |||||||| || || |||||||||||||||| |||||||    
T  18770317 aggcacgttagcactctgacgctcaagtcagtaatgaaattgagaaagagtgtgtagaaagtgt 18770380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 31013553 - 31013593
Alignment:
Q  175 ggtgcatgcaggcacgttagcactccaatgctctagtcagt 215  Q
    ||||| || |||||||||||||||||||||||| |||||||    
T  31013553 ggtgcttgtaggcacgttagcactccaatgctcaagtcagt 31013593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 111 - 403
Target Start/End: Complemental strand, 43344601 - 43344314
Alignment:
Q  111 gaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctag 210  Q
    ||||||||| | | |||||||| | ||||||| ||||||||||||||  |||||| | |  |||||||  |||||  |||||||||||| || |||| ||    
T  43344601 gaggcaatgatagtggaaagtgttctggtacggtggcgatgagtctt--tgcggtgggatgaaaggtgtctgcagaaacgttagcactcgaacgctcaag 43344504  T
Q  211 tcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaa 310  Q
    ||||||||| |||| ||||||||||||||||||||| | ||||||||||||||||||||  ||||||| ||| ||||| |||||||    ||||||||||    
T  43344503 tcagtattgaaact-agaaagagtgtgtaaaaagtgggggaaaagtgaatcatacattg--ggtgaagttaactcacccttatataagaatgtgtgagaa 43344407  T
Q  311 taactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggtgtatgatgcacagaggcgtgctctaatgtggta 403  Q
    ||||||||||   || || |||||||||| |||| ||||||||||| |||| |||||||| | ||||||||  ||| ||||||||||| ||||    
T  43344406 taactgcctctacgagatgcggcgtgtgactaggatgcggttagagaacacgtgtacggtatctgatgcacgaaggtgtgctctaatggggta 43344314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 98 - 298
Target Start/End: Original strand, 5671689 - 5671888
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    |||||||||| |||||||||  |||| ||||| |||| || |||| ||||||||||||| |  || | ||  |||||||||  || ||||||||||||||    
T  5671689 tgaggatggacgagaggcaacagtggtggaaaatgctctgatacggtggcgatgagtctgcccgctggag--caaaaggtgtttgtaggcacgttagcac 5671786  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatata 296  Q
    ||||| |||| ||| |||| |||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||||||| ||||||||  |||||||    
T  5671787 tccaacgctcaagttagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcatacattgaaggtgaagttaagtcactcttatata 5671886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 98 - 361
Target Start/End: Complemental strand, 5459880 - 5459619
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    |||||||||||||||||| | | |||||||| ||||| ||||||| |||||||||||||||||  ||| | || ||||||||||||||| ||||||||||    
T  5459880 tgaggatggatgagaggcgacgatggcggaatgtgctctggtacggtggcgatgagtcttcgt--ggtgggacgaaaggtgcatgcaggtacgttagcac 5459783  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatata 296  Q
    ||||| | || |  |||||  || |||||||||||||||||| |||||| || | |||||||||||||||||| || ||||| ||||||| | | | |||    
T  5459782 tccaacgttcaaaacagtaacgg-actgagaaagagtgtgtagaaagtgttgtgtaaagtgaatcatacattggggatgaagttaagtcagcctaacata 5459684  T
Q  297 gatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacac 361  Q
    ||   | ||||||||||| | | ||| | | | |||||||||||||||| || |||| |||||||    
T  5459683 gacgcgcgtgagaataaccgtcaccgtgttttgcggcgtgtgattagggagcagttaaaggacac 5459619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 111 - 295
Target Start/End: Original strand, 18246075 - 18246257
Alignment:
Q  111 gaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctag 210  Q
    ||||||| | ||||||||  | || ||||||| ||| |||||||||| |  |||| |||| |||||||  || | |||||||| |||||||| |||| ||    
T  18246075 gaggcaacgatggcggaagatactctggtacggtggtgatgagtcttgg--cggtggaacgaaaggtgtctgtaagcacgttaacactccaacgctcaag 18246172  T
Q  211 tcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatat 295  Q
    | |||||| ||| ||||||||||||| ||||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||    
T  18246173 tgagtattagaattgagaaagagtgtataaaaagtgtgagaaaagtgattcataccttgagggtgaagataagtcacccttatat 18246257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 298
Target Start/End: Complemental strand, 33101679 - 33101480
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    ||||||||||||||||||||   |||||||||||| |  |||||  ||  ||||||||||||  | ||||||  ||||||||||||||||||||||||||    
T  33101679 tgaggatggatgagaggcaacactggcggaaagtgtttcggtacagtgttgatgagtcttcg--ctgtagaatgaaaggtgcatgcaggcacgttagcac 33101582  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatata 296  Q
    ||||| |||| |||| ||| ||||||||||||| |||||||| |||||| || |||||||||| | ||  ||||||||||| | | |||||| |||| ||    
T  33101581 tccaacgctcaagtcggtaatggaactgagaaaaagtgtgtagaaagtgttgtgaaaagtgaaccgtaacttgagggtgaaacaatgtcacctttatgta 33101482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 117 - 297
Target Start/End: Original strand, 34273025 - 34273204
Alignment:
Q  117 atggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagta 216  Q
    |||||||| ||||||| |  |||||| |||||| |||||||  |||||| | || |||||| | |||| |||||||||||||||||||||| ||||||||    
T  34273025 atggtggctgaaagtgtttcggtacggtggcgaggagtctt--tgcggtgggacgaaaggtacctgcaagcacgttagcactccaatgctcaagtcagta 34273122  T
Q  217 ttggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatag 297  Q
      ||||||||||||||||||||| |||||| || | ||||||| |||||| ||||||||||||| | ||| || ||||||||    
T  34273123 acggaactgagaaagagtgtgtagaaagtgttgtgtaaagtgactcataccttgagggtgaagcaatgtcgcccttatatag 34273204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 279
Target Start/End: Original strand, 26977719 - 26977839
Alignment:
Q  160 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagt-gtgagaaaagtga 258  Q
    |||||| |||| |||||||| |||||||||||||||||||||| |||| |||||||| |||||| ||||||||||||||| |||||  || ||||| |||    
T  26977719 tgcggtggaacgaaaggtgcctgcaggcacgttagcactccaacgctcaagtcagtaatggaaccgagaaagagtgtgtagaaagtattgtgaaaaatga 26977818  T
Q  259 atcatacattgagggtgaagc 279  Q
    ||||||| |||||||||||||    
T  26977819 atcataccttgagggtgaagc 26977839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 112 - 314
Target Start/End: Original strand, 8018882 - 8019082
Alignment:
Q  112 aggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagt 211  Q
    |||||| | ||| ||||||||||  |||||| ||||||||||||||||||  || | || ||||||   | |||||||||||||||| | | |||| |||    
T  8018882 aggcaacgttggtggaaagtgctccggtacggtggcgatgagtcttcgtg--gtgggacgaaaggtatctacaggcacgttagcactacgacgctcaagt 8018979  T
Q  212 cagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaat 311  Q
    |||||| |||| |||||  || |||| |||||||  | |||||||||||||||| ||| ||||||||||| |||||| ||||||||   |||||||||||    
T  8018980 cagtatgggaaatgagatggaatgtgcaaaaagtaggggaaaagtgaatcataccttgggggtgaagctatgtcacccttatataggcgtgtgtgagaat 8019079  T
Q  312 aac 314  Q
    |||    
T  8019080 aac 8019082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 297
Target Start/End: Original strand, 16030360 - 16030512
Alignment:
Q  144 tggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaa 243  Q
    |||||||||||||||   |||| |||  |||||||  ||||||||||||| || || ||||||| |||||||| |||||||||  ||||||||||| |||    
T  16030360 tggcgatgagtcttca--cggtggaatgaaaggtgtctgcaggcacgttatcagtcaaatgctcaagtcagtaatggaactgaataagagtgtgtagaaa 16030457  T
Q  244 gtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatag 297  Q
    ||| || |||||||||||||||| ||||||| ||||||||| |||| ||||||||    
T  16030458 gtgttgtgaaaagtgaatcataccttgagggcgaagctaagccacccttatatag 16030512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 167 - 328
Target Start/End: Complemental strand, 2612768 - 2612607
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcataca 266  Q
    |||| |||||||  ||||| |||||||| | |  || |||| ||||||||||||||||||| ||||||||||||||| || |  |||| ||||||||||     
T  2612768 gaacgaaaggtgtctgcagacacgttagtattgaaacgctcaagtcagtattggaactgaggaagagtgtgtaaaaaatgcggaaaaaatgaatcatacc 2612669  T
Q  267 ttgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatat 328  Q
    |||||| ||||||||| ||||| |||||||||  ||||| ||||||  |||||||| |||||    
T  2612668 ttgaggatgaagctaactcacccttatatagacgtgtgtaagaatatatgcctccgtgatat 2612607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 181 - 297
Target Start/End: Original strand, 16050394 - 16050511
Alignment:
Q  181 tgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattgagggtgaagc 279  Q
    |||||||||||||||||||||| |||| ||||| |  |||||||||||||||||||||| ||||||| | |||||||||| ||||| |||||| ||||||    
T  16050394 tgcaggcacgttagcactccaacgctcaagtcattgatggaactgagaaagagtgtgtagaaagtgtggtgaaaagtgaaccataccttgaggatgaagc 16050493  T
Q  280 taagtcaccgttatatag 297  Q
     | | |||| ||||||||    
T  16050494 aatgccacccttatatag 16050511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 279
Target Start/End: Original strand, 22414734 - 22414874
Alignment:
Q  138 gtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtg 237  Q
    ||||| || |||||||||||  |||||| |||| ||||||||  ||||||||||||||||||  | |||| |||||||| || |||||| ||| ||||||    
T  22414734 gtacggtgacgatgagtctt--tgcggtggaacgaaaggtgcccgcaggcacgttagcactctgacgctcaagtcagtaatgaaactgaaaaaaagtgtg 22414831  T
Q  238 taaaaagtg-tgagaaaagtgaatcatacattgagggtgaagc 279  Q
    || |||||| || |||||||||||||||  |||||||||||||    
T  22414832 tagaaagtgttgtgaaaagtgaatcatatcttgagggtgaagc 22414874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 161 - 272
Target Start/End: Original strand, 12177366 - 12177478
Alignment:
Q  161 gcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaa 259  Q
    ||||| |||| |||||||| | || ||||||||||||||| |  ||| |||||||| |||||||||||||||||||||| |||||| || ||||||||||    
T  12177366 gcggtggaacgaaaggtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 12177465  T
Q  260 tcatacattgagg 272  Q
    | |||| ||||||    
T  12177466 ttataccttgagg 12177478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 98 - 371
Target Start/End: Complemental strand, 2141115 - 2140848
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    |||||||| |||| || |||||||| ||||| ||||| | || || | ||||||| |||||   ||||||||| ||||||| |||||||||  |||||||    
T  2141115 tgaggatgaatgaaagacaatggtgacggaatgtgctctagt-cggtagcgatgaatcttca--cggtagaacgaaaggtgtatgcaggcaacttagcac 2141019  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatata 296  Q
    ||||| |||| |||||||| | |||     ||||| |||||| ||||||| | | |||||||| ||||| |||||||||||||||||||||| ||||| |    
T  2141018 tccaacgctcaagtcagtaattgaaa----aaagaatgtgtagaaagtgttgtggaaagtgaaccataccttgagggtgaagctaagtcacccttataaa 2140923  T
Q  297 gatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggtg 371  Q
    ||   | |||||||||||  | | |||| | |  || |||||||||||   |||||||||||||| |||| ||||    
T  2140922 gacgcgcgtgagaataaccactttcgggttttgtggtgtgtgattaggaaacggttagaggacacgtgtatggtg 2140848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 14255155 - 14255055
Alignment:
Q  145 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaag 244  Q
    |||||||||||||||||  || |||| || ||||| |||| ||||| ||||||||||| |||| ||||| || || |||||||||||||||||||| |||    
T  14255155 ggcgatgagtcttcgtg--gtggaacgaagggtgcctgcaagcacgatagcactccaacgctcaagtcattaatgaaactgagaaagagtgtgtaagaag 14255058  T
Q  245 tgt 247  Q
    |||    
T  14255057 tgt 14255055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 25408087 - 25408162
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    |||||||| ||||| ||||||||||||||||||||| |||||||| || |||||| | ||||||||||| ||||||    
T  25408087 aaaggtgcctgcagacacgttagcactccaatgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgt 25408162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 48637515 - 48637617
Alignment:
Q  144 tggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaa 243  Q
    ||||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||  | |||| |||||||| ||||||||| | ||||  ||||| ||    
T  48637515 tggcgatgagtcttc-tgcggtagaacgaaaggtgcctgcaggcacgtcagcactctgacgctcaagtcagtaatggaactgaaagagaggatgtaagaa 48637613  T
Q  244 gtgt 247  Q
    ||||    
T  48637614 gtgt 48637617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 52565566 - 52565679
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatac 265  Q
    |||| |||||||| ||||| |||||||||||||  | |||| ||||||||  |||||||| |||||||| | | |||||| || |||||||||||||||     
T  52565566 gaacgaaaggtgcctgcagacacgttagcactctgacgctcaagtcagtaaaggaactgaaaaagagtgcgcagaaagtgttgtgaaaagtgaatcataa 52565665  T
Q  266 attgagggtgaagc 279  Q
     |||||||||||||    
T  52565666 cttgagggtgaagc 52565679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 4601612 - 4601513
Alignment:
Q  145 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaag 244  Q
    |||||| ||||||||  |||| |||| |||||||  |||||||||||||||||||| | |||| |||||||| || |||||||||| | ||||||| |||    
T  4601612 ggcgataagtcttcg--cggtggaacgaaaggtgactgcaggcacgttagcactccgacgctcaagtcagtaatgaaactgagaaataatgtgtaataag 4601515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 3590813 - 3590874
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgaga 228  Q
    |||| |||||||||||||||||| |||||||||| | | || |||||||| |||||||||||    
T  3590813 gaacgaaaggtgcatgcaggcaccttagcactccgacgatcaagtcagtaatggaactgaga 3590874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 147 - 247
Target Start/End: Complemental strand, 23728942 - 23728845
Alignment:
Q  147 cgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 246  Q
    |||||||||||||  |||| |||| ||||||| ||||||||||||||||| |   | |||| ||||| || ||||| ||||||||||||||||| |||||    
T  23728942 cgatgagtcttcg--cggt-gaacgaaaggtggatgcaggcacgttagcattatgacgctcaagtcattaatggaaatgagaaagagtgtgtaagaagtg 23728846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 23280464 - 23280412
Alignment:
Q  87 gatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggt 139  Q
    |||||||||| |||||||| ||||| ||||| |||||||||||||||| ||||    
T  23280464 gatctgttcggtgaggatgaatgagtggcaacggtggcggaaagtgctctggt 23280412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 443
Target Start/End: Original strand, 18246257 - 18246387
Alignment:
Q  315 tgcctccgggatatacggcgtgtgattagggtgcggttagagg--acacatgtacggtgtatgatgcacagaggcgtgctctaatgtggtatggtgcact 412  Q
    |||||||| || || | ||||||||||||   ||||||||||   |||||||||||||   |||||| | ||||||| ||| ||||  ||| |||| |||    
T  18246257 tgcctccgcgagatgcagcgtgtgattagaaggcggttagagagaacacatgtacggtagctgatgcccggaggcgttctcaaatggagtaaggtgtact 18246356  T
Q  413 gacgttggcgtgttccttcaggcgatgcgcc 443  Q
    |   |||||||||||||||||||||||||||    
T  18246357 ggtattggcgtgttccttcaggcgatgcgcc 18246387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 30732511 - 30732549
Alignment:
Q  175 ggtgcatgcaggcacgttagcactccaatgctctagtca 213  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  30732511 ggtgcctgcaggcacgttagcactccaatgctcaagtca 30732549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 1485371 - 1485471
Alignment:
Q  175 ggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggt 274  Q
    |||| |||||| ||||||||||||| || |||| | ||||| | |||| |||||  || |||||||||| ||||||  || |||||||||| ||||||||    
T  1485371 ggtgtatgcagacacgttagcactcaaacgctcaaatcagtgtaggaattgagatggaatgtgtaaaaa-tgtgagggaaatgaatcataccttgagggt 1485469  T
Q  275 ga 276  Q
    ||    
T  1485470 ga 1485471  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 23280365 - 23280237
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcataca 266  Q
    |||| |||||||| ||||| || |||| ||||| ||  ||| |||||||| |||||||||||||| ||||||| |  || || ||||||||||| || |     
T  23280365 gaacgaaaggtgcctgcagacatgttatcactcaaactctcaagtcagtaatggaactgagaaagtgtgtgtatagtgt-tgtgaaaagtgaataatgcc 23280267  T
Q  267 ttgagggtgaagctaagtcaccgttatata 296  Q
     |||||||||||| |  ||||| |||||||    
T  23280266 atgagggtgaagcaagttcacctttatata 23280237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 91; Significance: 7e-44; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 160 - 461
Target Start/End: Complemental strand, 9573538 - 9573236
Alignment:
Q  160 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaa 259  Q
    |||||| ||||||  ||||| |||||||||||||||||||||| || | ||||| ||| |||||||||||||||||||||| ||||||| ||||  ||||    
T  9573538 tgcggtggaacaaggggtgcctgcaggcacgttagcactccaacgcacaagtcaatatgggaactgagaaagagtgtgtaagaagtgtgggaaacatgaa 9573439  T
Q  260 tcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggac 359  Q
    ||||||||||  ||||||||||||||||| ||||||||   ||||| |||||||||   | || || || |||| ||||||||||  |||||||||||||    
T  9573438 tcatacattggaggtgaagctaagtcacccttatataggaatgtgtaagaataactattttcgtgagatgcggcatgtgattaggaggcggttagaggac 9573339  T
Q  360 acatgtacggtgtatgatgcacagaggcgtgctctaatgtggtatggtgcactgacgttggcgtgttccttcaggcgatgcgccttagtc-agtggacgt 458  Q
    || | || ||||  |||||||| ||||| ||||||| ||  ||| |||| ||| |  |||||||| ||||| ||| ||||  ||||||||  ||||||||    
T  9573338 acctatatggtgcttgatgcacggaggcatgctctagtgaagtaaggtgtactaatattggcgtgctcctttaggggatgaaccttagtctggtggacgt 9573239  T
Q  459 tta 461  Q
    |||    
T  9573238 tta 9573236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 84 - 297
Target Start/End: Original strand, 29373351 - 29373563
Alignment:
Q  84 attgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgc 183  Q
    |||||||||| |  ||||||| ||||||||||||| |||| ||||| || | ||||||| ||| ||||||| ||  ||||||  ||| ||||||||||||    
T  29373351 attgatctgtccagtgaggatagatgagaggcaatagtggtggaaaatgttctggtacggtggtgatgagtttt--tgcggtgaaacgaaaggtgcatgc 29373448  T
Q  184 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaa 282  Q
    ||||| ||||| |||||||||||| |||||||  || || |||||||||||||||| ||| || || ||||| |||||||||| ||||||||||||| |     
T  29373449 aggcatgttaggactccaatgctcaagtcagttgtgtaattgagaaagagtgtgtagaaaatgttgtgaaaattgaatcataccttgagggtgaagcaat 29373548  T
Q  283 gtcaccgttatatag 297  Q
    |||||| | ||||||    
T  29373549 gtcaccctcatatag 29373563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 162 - 298
Target Start/End: Complemental strand, 9135471 - 9135334
Alignment:
Q  162 cggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaat 260  Q
    |||| |||| ||||||||||  |||||||||||||||| || |||| |||||||| ||||| |||||||||||||||||||| || || |||||||||||    
T  9135471 cggtggaacgaaaggtgcatataggcacgttagcactctaacgctcaagtcagtaatggaattgagaaagagtgtgtaaaaactgttgtgaaaagtgaat 9135372  T
Q  261 catacattgagggtgaagctaagtcaccgttatataga 298  Q
    ||||| ||||||||||||| || ||||| |||||||||    
T  9135371 cataccttgagggtgaagcaaattcacccttatataga 9135334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 84 - 276
Target Start/End: Original strand, 21161147 - 21161339
Alignment:
Q  84 attgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgc 183  Q
    |||||||||| |  |||||||||||||||||||||| |||| |||  |||| ||| |||  |  ||||||||||||  |||| |||| |||| ||  |||    
T  21161147 attgatctgtccagtgaggatggatgagaggcaatgttggcagaatatgctctggaacggggaagatgagtcttcg--cggtggaacgaaag-tgtctgc 21161243  T
Q  184 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcataca--ttgagggtga 276  Q
    ||||||||||||||||||| |||| |||||||| |||| || |||||| ||||||| |||||| || |||||||||||||||||  ||||||||||    
T  21161244 aggcacgttagcactccaacgctcaagtcagtaatggagctaagaaagtgtgtgtagaaagtgttgtgaaaagtgaatcatacactttgagggtga 21161339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 437
Target Start/End: Complemental strand, 12004854 - 12004614
Alignment:
Q  197 ctccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatata 296  Q
    |||||| |||| | |||||||||||| | |||| | |||||||||||||||| ||||||| |||||| | ||   ||||||||||||||||| |||||||    
T  12004854 ctccaacgctcaaatcagtattggaaatcagaaggtgtgtgtaaaaagtgtgggaaaagtcaatcatccctttgaggtgaagctaagtcacccttatata 12004755  T
Q  297 gatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggtgtatgatgcacagaggcgtgctctaa 396  Q
    |   ||||||||||||||||| ||||  || | ||| | |||||||||   |||||| || | || || | ||||| ||||||||||| ||| ||||||     
T  12004754 ggcgtgtgtgagaataactgcttccgtaatttgcggagcgtgattaggagacggttaaagaatacgtgcatggtgtctgatgcacagaagcgcgctctag 12004655  T
Q  397 tgtggtatggtgcactgacgttggcgtgttccttcaggcga 437  Q
    || |||    |||| |||  |||||||||||||||||||||    
T  12004654 tgaggtgacatgcaatgatattggcgtgttccttcaggcga 12004614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 13159289 - 13159439
Alignment:
Q  95 cgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttag 194  Q
    ||||||||||||||||||||||| |||||  |||  ||||   |||||  |||| ||||||||  |||||  | |||||| |||| |||||||||||||     
T  13159289 cgatgaggatggatgagaggcaacggtgggagaagatgctccagtacggcggcgttgagtctt--tgcggcgggacaaaatgtgcctgcaggcacgttaa 13159386  T
Q  195 cactccaatgctctagtcagtattggaactgaga-aagagtgtgtaaaaagtg 246  Q
    ||||||||||||| | |||||||||||||| ||| ||||||||||||||||||    
T  13159387 cactccaatgctcaaatcagtattggaactaagagaagagtgtgtaaaaagtg 13159439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 7486536 - 7486628
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcat 263  Q
    ||||||||||||||||||||||||||||||| |||| | |||||| ||||||||||||||| |||||| || ||| || ||||||||||||||    
T  7486536 aaaggtgcatgcaggcacgttagcactccaacgctcaattcagtaatggaactgagaaagattgtgtagaaggtgttgtgaaaagtgaatcat 7486628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 172 - 279
Target Start/End: Complemental strand, 26763011 - 26762903
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    |||||| | |||||||||||||||||||||| |||| ||||||||  |||||| | ||| |||||||| |||||| || |||||||||||||||| ||||    
T  26763011 aaaggttcttgcaggcacgttagcactccaacgctcaagtcagtaaaggaactcataaatagtgtgtagaaagtgttgtgaaaagtgaatcataccttga 26762912  T
Q  271 gggtgaagc 279  Q
    |||||||||    
T  26762911 gggtgaagc 26762903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 137 - 297
Target Start/End: Original strand, 5863145 - 5863304
Alignment:
Q  137 ggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgt 236  Q
    |||||| | |||||||||||||   ||||||||| |||  ||| |||| |||||||||||||| || |||| |||||||| | |||||||||||||||||    
T  5863145 ggtacggtagcgatgagtcttca--cggtagaacgaaatttgcgtgcaagcacgttagcactcaaacgctcaagtcagtaatcgaactgagaaagagtgt 5863242  T
Q  237 gtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatag 297  Q
    ||| ||| || ||  ||||||||||||||| ||||||||| ||| | |||||| || |||||    
T  5863243 gtagaaaatgttgtaaaaagtgaatcataccttgagggtggagcaatgtcacccttgtatag 5863304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 162 - 279
Target Start/End: Original strand, 12644766 - 12644885
Alignment:
Q  162 cggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt--gagaaaagtgaa 259  Q
    |||| |||| ||||||||||||||||| ||||||||||| | ||||  ||||||| ||||||||||||| |||||||  |||||||  | ||||||||||    
T  12644766 cggtggaacgaaaggtgcatgcaggcaagttagcactccgacgctcaggtcagtaatggaactgagaaaaagtgtgtggaaagtgttggtgaaaagtgaa 12644865  T
Q  260 tcatacattgagggtgaagc 279  Q
    |  ||| |||||||||||||    
T  12644866 ttgtacgttgagggtgaagc 12644885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 172 - 272
Target Start/End: Complemental strand, 9868039 - 9867938
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    ||||||||||||||| ||||||||||||  | |||| |||||||| |||||||||| |||||| |||| |||||| ||  ||||||||||||||| ||||    
T  9868039 aaaggtgcatgcaggaacgttagcactctgacgctcaagtcagtaatggaactgaggaagagtttgtagaaagtgttgttaaaagtgaatcataccttga 9867940  T
Q  271 gg 272  Q
    ||    
T  9867939 gg 9867938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 185 - 297
Target Start/End: Complemental strand, 43172114 - 43172010
Alignment:
Q  185 ggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagt 284  Q
    ||||||||||||||||||||||| ||||| || |||||||||||||| | ||||        || |||||||||||||||||||||||||||||| |  |    
T  43172114 ggcacgttagcactccaatgctcaagtcaataatggaactgagaaagtgagtgt--------tgtgaaaagtgaatcatacattgagggtgaagcaactt 43172023  T
Q  285 caccgttatatag 297  Q
    |||| ||||||||    
T  43172022 cacccttatatag 43172010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 145 - 297
Target Start/End: Complemental strand, 13292248 - 13292097
Alignment:
Q  145 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaag 244  Q
    |||||||||||||||||  || |||  |||||||  |||||| |||||||||||| || |||| |||||||| || |||||| ||||||||||||| |||    
T  13292248 ggcgatgagtcttcgtg--gtggaaggaaaggtgtctgcaggtacgttagcactctaacgctcaagtcagtaatgaaactgaaaaagagtgtgtaagaag 13292151  T
Q  245 tg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatag 297  Q
    || || |||||||||    ||| ||||||||||||| |  ||||| ||||||||    
T  13292150 tgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcaccattatatag 13292097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 263
Target Start/End: Original strand, 39879373 - 39879470
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcat 263  Q
    |||| |||||||| ||||| ||||||| ||||  || |||| |||||||| || |||||||||||||||||||||||||| ||  |||||||||||||    
T  39879373 gaacgaaaggtgcctgcagacacgttaacactttaacgctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgttgtaaaaagtgaatcat 39879470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 136 - 247
Target Start/End: Complemental strand, 16987226 - 16987117
Alignment:
Q  136 tggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtg 235  Q
    |||||||  ||| |||||||||||  |||| |||| |||||||||||| |||||||||||||||  |  ||| || ||||| ||||| ||||||||||||    
T  16987226 tggtacggcggcaatgagtcttcg--cggtggaacgaaaggtgcatgcgggcacgttagcactctgacactcaagccagtaatggaattgagaaagagtg 16987129  T
Q  236 tgtaaaaagtgt 247  Q
    ||||| ||||||    
T  16987128 tgtaagaagtgt 16987117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 297
Target Start/End: Original strand, 2226575 - 2226759
Alignment:
Q  111 gaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctag 210  Q
    |||||||  |||||||||| |||| |||||   ||||||||| |||||   |||| | || |||||||  ||||||||| |||||||||||| |||| ||    
T  2226575 gaggcaacagtggcggaaaatgctctggtatagtggcgatgaatcttca--cggtgggacgaaaggtgtctgcaggcacattagcactccaacgctcaag 2226672  T
Q  211 tcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatag 297  Q
    | ||| | |||| |||||   | ||||| ||||||||| || ||||||||| ||  ||| | |||||||||||||||| ||||||||    
T  2226673 ttagtgtgggaaatgagatgaaatgtgtgaaaagtgtgggagaagtgaatcgtatcttgggagtgaagctaagtcacctttatatag 2226759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 5925585 - 5925519
Alignment:
Q  162 cggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgaga 228  Q
    |||| |||| |||||||  |||||||||||||||||||||| | || |||||||| |||||||||||    
T  5925585 cggtggaacgaaaggtgtctgcaggcacgttagcactccaacgatcaagtcagtaatggaactgaga 5925519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 275
Target Start/End: Complemental strand, 10287706 - 10287592
Alignment:
Q  162 cggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaat 260  Q
    |||| |||| |||||| | |||||||||||||||||   || |||| |||||||| |||| |||||||| ||||||||| ||||| || |||||||||      
T  10287706 cggtggaaccaaaggttcctgcaggcacgttagcaccttaacgctcaagtcagtaatggatctgagaaaaagtgtgtaagaagtgttgtgaaaagtgaga 10287607  T
Q  261 catacattgagggtg 275  Q
     |||| |||||||||    
T  10287606 gataccttgagggtg 10287592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 25173941 - 25174010
Alignment:
Q  245 tgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataac 314  Q
    |||| |||||||| ||||||||||||||| |||  ||||| ||| |||||||||  ||||||||||||||    
T  25173941 tgtgggaaaagtggatcatacattgagggagaatttaagtaacccttatatagacgtgtgtgagaataac 25174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 228
Target Start/End: Original strand, 18773960 - 18774028
Alignment:
Q  160 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgaga 228  Q
    |||||| |||| ||||||||||||||||||||||||||| | | | || | |||||| |||||||||||    
T  18773960 tgcggtggaacgaaaggtgcatgcaggcacgttagcacttcgacgatcaaatcagtaatggaactgaga 18774028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 297
Target Start/End: Original strand, 16203768 - 16203839
Alignment:
Q  227 gaaagagtgtgtaaaaagtgtga-gaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatag 297  Q
    ||||||||||||| ||||||| | |||||||||| ||||| || |||||||||  |||||||| ||||||||    
T  16203768 gaaagagtgtgtataaagtgttatgaaaagtgaaccataccttaagggtgaagaaaagtcacccttatatag 16203839  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 12265202 - 12265165
Alignment:
Q  162 cggtagaacaaaaggtgcatgcaggcacgttagcactc 199  Q
    |||| ||||||||||||||||||||||||||| |||||    
T  12265202 cggtggaacaaaaggtgcatgcaggcacgttaacactc 12265165  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 5929100 - 5929036
Alignment:
Q  183 caggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    ||||||| ||||||||||||  ||| |||||||| ||||||||| | |||| |||||| ||||||    
T  5929100 caggcacattagcactccaacactcaagtcagtaatggaactgaaagagagagtgtaagaagtgt 5929036  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 371
Target Start/End: Original strand, 16203873 - 16203913
Alignment:
Q  331 ggcgtgtgattagggtgcggttagaggacacatgtacggtg 371  Q
    ||||||||||||||| ||||||||||||||| |||| ||||    
T  16203873 ggcgtgtgattagggagcggttagaggacacgtgtagggtg 16203913  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 371
Target Start/End: Original strand, 16204442 - 16204482
Alignment:
Q  331 ggcgtgtgattagggtgcggttagaggacacatgtacggtg 371  Q
    ||||||||||||||| ||||||||||||||| |||| ||||    
T  16204442 ggcgtgtgattagggagcggttagaggacacgtgtagggtg 16204482  T

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Target: chr6 (Bit Score: 81; Significance: 6e-38; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 126 - 297
Target Start/End: Complemental strand, 9292163 - 9291994
Alignment:
Q  126 gaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactg 225  Q
    ||||||||| || |||| ||| || |||||||  | |||| |||| |||||||| |||| |||||||||||| | || |||| |||||||||||||||||    
T  9292163 gaaagtgctctgctacggtggtgaggagtctt--tacggtggaacgaaaggtgcctgcaagcacgttagcacgctaacgctcaagtcagtattggaactg 9292066  T
Q  226 agaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatag 297  Q
    ||||| ||| ||||||||||||| |||||||||||||||| |||||||||||||||| ||||| ||||||||    
T  9292065 agaaatagtatgtaaaaagtgtgggaaaagtgaatcataccttgagggtgaagctaactcacctttatatag 9291994  T

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Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 98 - 345
Target Start/End: Original strand, 34187218 - 34187459
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    |||||||| ||||||||||| || ||||||||||| |  | |||  ||| ||| ||||||  |||||| |||| |||||||  ||||| |||||||||||    
T  34187218 tgaggatgaatgagaggcaacggcggcggaaagtgttccgctacagtggtgataagtctt--tgcggtggaacgaaaggtgtctgcagacacgttagcac 34187315  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatag 297  Q
     ||||  ||| |||||||| |||||||||||||||||||||||||||||||   |||||||||  ||| |||||||||||||    ||||| ||||||||    
T  34187316 accaacactcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgtggtgaaagtgaattgtaccttgagggtgaagc----tcacccttatatag 34187411  T
Q  298 atttgtgtgagaataactgcctccgggatatacggcgtgtgattaggg 345  Q
       |  ||||||||||| | ||||||||||| | ||||||||||||||    
T  34187412 gcatacgtgagaataaccgtctccgggatatgcagcgtgtgattaggg 34187459  T

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Target: chr6; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 160 - 294
Target Start/End: Complemental strand, 9277412 - 9277278
Alignment:
Q  160 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaa 259  Q
    |||||| |||| |||||| | ||||| ||||||||||||  || |||| |||||||||||||||||||||||||| |||||||||||||   ||||||||    
T  9277412 tgcggtggaacgaaaggttcctgcagacacgttagcactataacgctcaagtcagtattggaactgagaaagagtatgtaaaaagtgtggagaaagtgaa 9277313  T
Q  260 tcatacattgagggtgaagctaagtcaccgttata 294  Q
    |||||| |||||||||||||||| ||||| |||||    
T  9277312 tcataccttgagggtgaagctaactcacccttata 9277278  T

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Target: chr6; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 123 - 320
Target Start/End: Complemental strand, 10927041 - 10926845
Alignment:
Q  123 gcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaa 222  Q
    |||||||||| | ||||||| |||||| |||||||  ||||||   || |||||| ||||||| |||||||||||  ||| || | | ||||||||||||    
T  10927041 gcggaaagtgatctggtacggtggcgacgagtctt--tgcggtgagacgaaaggttcatgcagacacgttagcacctcaacgcccaattcagtattggaa 10926944  T
Q  223 ctgagaaa-gagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctc 320  Q
    |||||||| ||||| |||||||||||| ||||||||||| |||  ||| |||||||||||| |  || |||||||| | || |||||||||||||||||    
T  10926943 ctgagaaaagagtgcgtaaaaagtgtgggaaaagtgaattatatcttgggggtgaagctaacttgcccttatataggtgtgggtgagaataactgcctc 10926845  T

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Target: chr6; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 114 - 314
Target Start/End: Original strand, 22692038 - 22692226
Alignment:
Q  114 gcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtca 213  Q
    |||||||||||||||||||||  | | || ||||||||||||||||  |||| |||| ||||||||          ||||||| ||||| |||| |||||    
T  22692038 gcaatggtggcggaaagtgctccgattcggtggcgatgagtcttcg--cggtggaacgaaaggtgc----------gttagcattccaacgctcaagtca 22692125  T
Q  214 gtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataa 313  Q
    |||| |||| ||| |  || ||||| ||||||||| |||||||||||||||  |||||||||||||||||||||| |||||||| | |||||||||||||    
T  22692126 gtatgggaaatgaaatggaatgtgtgaaaagtgtgggaaaagtgaatcataacttgagggtgaagctaagtcacctttatataggtgtgtgtgagaataa 22692225  T

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Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 172 - 264
Target Start/End: Complemental strand, 25008490 - 25008398
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcata 264  Q
    |||||||||||  ||||||||| |||||||| |||| |||||||| ||||| ||||||||||||||||||||||||| | |||||||||||||    
T  25008490 aaaggtgcatgtcggcacgttaacactccaacgctcaagtcagtaatggaattgagaaagagtgtgtaaaaagtgtgggtaaagtgaatcata 25008398  T

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Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 196 - 371
Target Start/End: Complemental strand, 34573070 - 34572894
Alignment:
Q  196 actccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtga-gaaaagtgaatcatacattgagggtgaagctaagtcaccgttata 294  Q
    ||||||| |||| ||| |||| | ||||| ||||| |||||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||| |||||    
T  34573070 actccaacgctcaagttagtaatagaactaagaaaaagtgtgtagaaagtgtggtgaaaagtgaatcatacattgagggtgaagttaagtcacccttata 34572971  T
Q  295 tagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggtg 371  Q
    |||    ||||||||||||    ||||  ||||| || ||||||||||||| | | ||||||||||| |||| ||||    
T  34572970 taggcgcgtgtgagaataatcatctccatgatatgcgacgtgtgattagggagtgattagaggacacgtgtagggtg 34572894  T

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Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 297
Target Start/End: Original strand, 19305467 - 19305581
Alignment:
Q  184 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaa 282  Q
    |||||||||||||||  || |||| |||||||| |||||||||| ||||||||||| |||||| || |||||||||||||||| ||||||||||||| |     
T  19305467 aggcacgttagcacttaaacgctcaagtcagtaatggaactgagtaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaag 19305566  T
Q  283 gtcaccgttatatag 297  Q
    |||||| ||| ||||    
T  19305567 gtcacccttaaatag 19305581  T

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Target: chr6; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 187 - 298
Target Start/End: Complemental strand, 10115770 - 10115658
Alignment:
Q  187 cacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattgagggtgaagctaagtc 285  Q
    ||||||||| | ||||||||| |||||||| || ||||||||||||| | ||||||||| | | |||||||||||||||| | |||||||||||||||||    
T  10115770 cacgttagctccccaatgctcaagtcagtaatgaaactgagaaagagcgagtaaaaagttttgtgaaaagtgaatcatacctcgagggtgaagctaagtc 10115671  T
Q  286 accgttatataga 298  Q
    | | |||||||||    
T  10115670 agccttatataga 10115658  T

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Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 297
Target Start/End: Original strand, 20148296 - 20148432
Alignment:
Q  160 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtga 258  Q
    |||||| |||| ||| |||||||||| |||||||||||||||  |||| ||| |||| ||||| |||||||||  ||||| |||||| || |||||||||    
T  20148296 tgcggtggaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaaga--gtgtagaaagtgttgtgaaaagtga 20148393  T
Q  259 atcatacattgagggtgaagctaagtcaccgttatatag 297  Q
    ||||||| |||| |||||||| | |||||| ||||||||    
T  20148394 atcataccttgatggtgaagcaaggtcacccttatatag 20148432  T

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Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 297
Target Start/End: Complemental strand, 22184532 - 22184396
Alignment:
Q  160 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtga 258  Q
    |||||| |||| ||| |||||||||| |||||||||||||||  |||| ||| |||| ||||| |||||||||  ||||| |||||| || |||||||||    
T  22184532 tgcggtggaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaaga--gtgtagaaagtgttgtgaaaagtga 22184435  T
Q  259 atcatacattgagggtgaagctaagtcaccgttatatag 297  Q
    ||||||| |||| |||||||| | |||||| ||||||||    
T  22184434 atcataccttgatggtgaagcaaggtcacccttatatag 22184396  T

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Target: chr6; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 209 - 366
Target Start/End: Complemental strand, 3404925 - 3404767
Alignment:
Q  209 agtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtga 307  Q
    |||||||| |||||||||||||||||||||| |||||| || ||||| |||||||||| |||||||||||| ||| | ||| ||||||||    ||||||    
T  3404925 agtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaaatgaatcataccttgagggtgaagttaaattacccttatataggcgcgtgtga 3404826  T
Q  308 gaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgta 366  Q
     |||||| | ||| ||| | | | ||||||||||| || | ||||||||||||| ||||    
T  3404825 aaataaccgtctctgggttttgcagcgtgtgattaaggagtggttagaggacacgtgta 3404767  T

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Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 172 - 297
Target Start/End: Original strand, 18147297 - 18147423
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    |||||||| || ||| |||||| |||||||| |||| ||||| || |||||| ||||||||||||||| |||||| || ||||||||| |||||| || |    
T  18147297 aaaggtgcctgtaggaacgttaacactccaacgctcaagtcactaatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtgactcataccttta 18147396  T
Q  271 gggtgaagctaagtcaccgttatatag 297  Q
    ||||||||| | |||||| ||||||||    
T  18147397 gggtgaagcaatgtcacccttatatag 18147423  T

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Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 294
Target Start/End: Original strand, 2907853 - 2908019
Alignment:
Q  126 gaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactg 225  Q
    ||||||||||| ||||| || ||| |||| ||||  ||||| ||| |||||||  ||||| ||||||||||| | || |||| | ||| |||||||| ||    
T  2907853 gaaagtgctatagtacggtgtcgacgagttttcg--cggtaaaacgaaaggtgtctgcagtcacgttagcacgctaacgctcaaatcattattggaattg 2907950  T
Q  226 agaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttata 294  Q
    |||||| ||||| |||| ||||| |||| ||||||| ||| |||| |||||| |||||||||| |||||    
T  2907951 agaaagggtgtgcaaaacgtgtgcgaaaggtgaatcgtactttgaaggtgaatctaagtcacccttata 2908019  T

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Target: chr6; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 15480440 - 15480315
Alignment:
Q  173 aaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattgag 271  Q
    ||||||| |||| ||| |||| ||||| ||  ||| ||||| || || |||||||||| |||||||| ||||||| | |||||||||||||||| |||||    
T  15480440 aaggtgcctgcaagcaagttatcactcgaactctcaagtcaataatgaaactgagaaaaagtgtgtagaaagtgttgtgaaaagtgaatcataccttgag 15480341  T
Q  272 ggtgaagctaagtcaccgttatatag 297  Q
     |||||||||||||||| ||||||||    
T  15480340 agtgaagctaagtcacccttatatag 15480315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 19730687 - 19730616
Alignment:
Q  176 gtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    ||||||||||||| ||||||||||||| |||| ||||| || ||||||||||||||||||||||| ||||||    
T  19730687 gtgcatgcaggcatgttagcactccaacgctcaagtcaataatggaactgagaaagagtgtgtaagaagtgt 19730616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 172 - 272
Target Start/End: Complemental strand, 689957 - 689856
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    |||||||  |||||| || |||||||| |||||||| |||||||| |||||||||||||| ||||||| |||||| || |||||||||||| ||| ||||    
T  689957 aaaggtgtttgcaggtacattagcactgcaatgctcaagtcagtaatggaactgagaaagtgtgtgtataaagtgttgtgaaaagtgaatcgtaccttga 689858  T
Q  271 gg 272  Q
    ||    
T  689857 gg 689856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 98 - 297
Target Start/End: Original strand, 30680911 - 30681109
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    ||||||||||| |||  ||| |||||||| | |||||  |||| | ||| ||||||||||||  |||| | || |||||||  ||||  |||||||||||    
T  30680911 tgaggatggataagaaacaacggtggcgggaggtgctccggtaaggtggagatgagtcttcg--cggtgggacgaaaggtgtctgcaatcacgttagcac 30681008  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagt-gtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatata 296  Q
    ||||| |||| |||||||| || |||||| |||||| ||||| || ||  || |||||||||||||||| |||||| |||||| | |||||| ||| |||    
T  30681009 tccaacgctcaagtcagtaatgaaactgataaagagcgtgtagaatgtattgtgaaaagtgaatcataccttgaggatgaagcaatgtcacctttagata 30681108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 440
Target Start/End: Complemental strand, 15104406 - 15104111
Alignment:
Q  127 aaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactga 226  Q
    |||||||| ||||||| ||| ||||||||||||  ||||||||| |||||||  ||||||||| |    ||||||| |||| ||||||||| | ||  ||    
T  15104406 aaagtgctctggtacggtggggatgagtcttcg--cggtagaacgaaaggtgtctgcaggcacat----actccaacgctcaagtcagtatagaaaacga 15104313  T
Q  227 gaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggat 326  Q
    ||||| ||||||||||           |||||||||||| ||| ||||||||||||| |||| ||||||||   ||||||||||||||  | || | ||     
T  15104312 gaaagggtgtgtaaaa-----------agtgaatcatactttg-gggtgaagctaagccacccttatataggcgtgtgtgagaataacctcttctgcgag 15104225  T
Q  327 atacggcgtgtgattagggtgcggttagaggacacatgtacggtgtatgatgcacagaggcgtgctctaatgtggtatggtgcactgacgttggcgtgtt 426  Q
    || ||  || ||||||||   ||| ||||||||||||||| ||||| |||||||| |  || ||||| | ||  ||| | || ||||| ||||| |||||    
T  15104224 atgcgatgtctgattaggagacggctagaggacacatgtatggtgtctgatgcacgggtgcatgctccagtggagtaagatgtactgatgttggtgtgtt 15104125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 9403173 - 9403238
Alignment:
Q  182 gcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    ||||||||||||| ||||| | |||| ||||| || ||||||||||||||||||||||| ||||||    
T  9403173 gcaggcacgttagaactccgacgctcaagtcaataatggaactgagaaagagtgtgtaagaagtgt 9403238  T

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Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 297
Target Start/End: Original strand, 14268440 - 14268549
Alignment:
Q  190 gttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga-gggtgaagctaagtcac 287  Q
    ||||||||||||| |||  |||||||| ||||||| ||| | |||||||| |||||| |  |||||||||||||||   ||| |||||||||||||||||    
T  14268440 gttagcactccaacgctgaagtcagtaatggaactaagacatagtgtgtagaaagtgttttgaaaagtgaatcatatcgtgaggggtgaagctaagtcac 14268539  T
Q  288 cgttatatag 297  Q
    | ||||||||    
T  14268540 ccttatatag 14268549  T

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Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 12203683 - 12203615
Alignment:
Q  227 gaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattgagggtgaagctaagtcaccgttata 294  Q
    |||||||| |||| ||||||| | |||||||||||||||| |||||||||||| ||||||||| |||||    
T  12203683 gaaagagtatgtagaaagtgttgtgaaaagtgaatcatactttgagggtgaagttaagtcacccttata 12203615  T

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Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 247
Target Start/End: Original strand, 16343573 - 16343645
Alignment:
Q  175 ggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    ||||| ||||||||||||||||||||||  ||| |||||||| ||||||||||| |||  |||||| ||||||    
T  16343573 ggtgcctgcaggcacgttagcactccaacactcaagtcagtaatggaactgagagagaaagtgtaagaagtgt 16343645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 22497423 - 22497323
Alignment:
Q  145 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaag 244  Q
    |||||||||||||||  || | |||| |||||||| ||||| |||||||||||||| | |||| |||||||| |||||| || | |||| || |||||||    
T  22497423 ggcgatgagtcttcg--cgatggaacgaaaggtgcttgcagacacgttagcactccgacgctcaagtcagtaatggaacagaaagagagagtataaaaag 22497326  T
Q  245 tgt 247  Q
    |||    
T  22497325 tgt 22497323  T

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Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 314
Target Start/End: Complemental strand, 2393523 - 2393458
Alignment:
Q  246 gtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataac 314  Q
    |||||||||||||||||||||||||||||   ||||||||||| ||||||||   ||||| ||||||||    
T  2393523 gtgagaaaagtgaatcatacattgagggt---gctaagtcacccttatataggcgtgtgtaagaataac 2393458  T

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Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 184 - 297
Target Start/End: Original strand, 17380100 - 17380214
Alignment:
Q  184 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaa 282  Q
    ||||| ||||| |||||||||  | |||||||| | |||||||||||||||||| | |||||| || |||||||||||| ||| || ||| ||| || |     
T  17380100 aggcatgttagtactccaatgtccaagtcagtaatagaactgagaaagagtgtgaataaagtgttgtgaaaagtgaatcttaccttcaggttgacgcaag 17380199  T
Q  283 gtcaccgttatatag 297  Q
    |||||| ||||||||    
T  17380200 gtcacccttatatag 17380214  T

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Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 278
Target Start/End: Complemental strand, 17703830 - 17703724
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgag 271  Q
    |||||| |||||| ||||||| || |||  |  ||| |||||| || |||| |||||| ||||||||||||||| ||||||||||||||| ||| ||  |    
T  17703830 aaaggttcatgcatgcacgttggctctctgactctcaagtcagcataggaaatgagaaggagtgtgtaaaaagtatgagaaaagtgaatcgtaccttacg 17703731  T
Q  272 ggtgaag 278  Q
    |||||||    
T  17703730 ggtgaag 17703724  T

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Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 22572031 - 22572143
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatac 265  Q
    ||||||||||||  ||||||||||||||||||   | ||||  ||||||| ||||| ||| |||||||||||| || ||| || | |||||||||||||     
T  22572031 gaacaaaaggtggctgcaggcacgttagcactatgacgctcatgtcagtaatggaattga-aaagagtgtgtagaaggtgttgtgtaaagtgaatcatat 22572129  T
Q  266 attgagggtgaagc 279  Q
     |||||||||||||    
T  22572130 cttgagggtgaagc 22572143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 183 - 286
Target Start/End: Complemental strand, 4251133 - 4251029
Alignment:
Q  183 caggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagcta 281  Q
    |||||||| || |||||||| | || |||||||| || || |||||||||||||| | | |||| || ||||||| |||||||  ||||||||||||| |    
T  4251133 caggcacgataacactccaacgttcaagtcagtaatgaaaatgagaaagagtgtggagagagtgttgtgaaaagtaaatcatatcttgagggtgaagcaa 4251034  T
Q  282 agtca 286  Q
    |||||    
T  4251033 agtca 4251029  T

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Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 12449705 - 12449608
Alignment:
Q  148 gatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    ||||||||||||||  || | || |||||||  || ||||||||||||||||  | |||| |||||||| |||| |||| ||||||||||||| ||||||    
T  12449705 gatgagtcttcgtg--gtgggacgaaaggtgtctgtaggcacgttagcactctgacgctcaagtcagtaatggagctgaaaaagagtgtgtaagaagtgt 12449608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 31295640 - 31295568
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgta 239  Q
    |||| |||| ||| |||||||| ||||||||| | | |||| |||||||| || |||||||||||||||||||    
T  31295640 gaacgaaagttgcctgcaggcatgttagcacttcgacgctcaagtcagtaatgaaactgagaaagagtgtgta 31295568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 297
Target Start/End: Original strand, 34064176 - 34064312
Alignment:
Q  162 cggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaat 260  Q
    ||||||||| |||||||  ||||||||||||| ||||   | | || |||||||| || |||| ||||||||||||||| ||||| || |||||||||      
T  34064176 cggtagaacgaaaggtgtgtgcaggcacgttaacactatgacgttcaagtcagtaatgaaactaagaaagagtgtgtaagaagtgttgtgaaaagtgatg 34064275  T
Q  261 catacattgagggtgaagctaagtcaccgttatatag 297  Q
      ||| ||||||||||||| |  ||||| ||||||||    
T  34064276 tgtaccttgagggtgaagcaagttcacccttatatag 34064312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 8006984 - 8006938
Alignment:
Q  241 aaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcacc 288  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||||||    
T  8006984 aaagtgtgggaaaag-gaatcatacattgggggtgaagctaagtcacc 8006938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 32721231 - 32721169
Alignment:
Q  234 tgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatag 297  Q
    ||||||||||||||| ||||||||||| |||| ||| || ||||||||| ||||| ||||||||    
T  32721231 tgtgtaaaaagtgtgggaaaagtgaattataccttg-ggatgaagctaaatcacccttatatag 32721169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 18567428 - 18567366
Alignment:
Q  234 tgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatata 296  Q
    ||||| ||||||||| ||||||||||||  || ||| |||||||| ||||||||| |||||||    
T  18567428 tgtgtgaaaagtgtgggaaaagtgaatctaaccttgggggtgaagttaagtcacccttatata 18567366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 264
Target Start/End: Original strand, 14080475 - 14080567
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcata 264  Q
    |||||||| | ||||||| |||||||||  | |||| ||| |||| || |||||||||||||||||||  ||||| || |||||||||||||||    
T  14080475 aaaggtgcctacaggcacattagcactctgacgctcaagttagtaatg-aactgagaaagagtgtgtagtaagtgttgtgaaaagtgaatcata 14080567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 277
Target Start/End: Original strand, 16130996 - 16131065
Alignment:
Q  209 agtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattgagggtgaa 277  Q
    |||||||| ||||||||| |||||||||  | ||||||| | |||| ||||||||||| |||||||||||    
T  16130996 agtcagtaatggaactgataaagagtgtacagaaagtgttgtgaaacgtgaatcataccttgagggtgaa 16131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 279
Target Start/End: Complemental strand, 27861053 - 27860940
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatac 265  Q
    ||||||||||||  |||||||| ||||| |||| ||  ||| |||||||| ||||||||| | |||| |||||| ||||| || |||||||||    |||    
T  27861053 gaacaaaaggtgtctgcaggcatgttagtactctaacactcaagtcagtaatggaactgaaagagagagtgtaagaagtgttgtgaaaagtgatgtgtac 27860954  T
Q  266 attgagggtgaagc 279  Q
     |||||||||||||    
T  27860953 tttgagggtgaagc 27860940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 690064 - 690016
Alignment:
Q  84 attgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtg 132  Q
    ||||||||||||| |||||||||||||| || ||||||||  |||||||    
T  690064 attgatctgttcggtgaggatggatgagtggtaatggtggtagaaagtg 690016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 371
Target Start/End: Original strand, 11087530 - 11087693
Alignment:
Q  209 agtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtg-tg 306  Q
    |||||||| || |||||||||||||| |||| |  |||| | |||||||||||||||| |||||| |||| | |  ||||| |||||||| |  | | ||    
T  11087530 agtcagtaatgtaactgagaaagagtatgtagattgtgttgtgaaaagtgaatcataccttgaggatgaaacaagttcacccttatataggtgcgcgttg 11087629  T
Q  307 agaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggtg 371  Q
    || ||||||| ||||||  ||| |||||||| |||| ||  |||||||||||||| |||| ||||    
T  11087630 agcataactgtctccggattatgcggcgtgtaattaagg-acggttagaggacacgtgtagggtg 11087693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 12424419 - 12424339
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    |||| |||||||| |||||||||||||||||| | |   || |||||||| ||||||||||| |||  || ||||||||||    
T  12424419 gaacgaaaggtgcctgcaggcacgttagcactacgacaatcaagtcagtaatggaactgagagagaaagtctaaaaagtgt 12424339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 14080382 - 14080418
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgct 134  Q
    |||||||||||||| | ||||||||||||||||||||    
T  14080382 tgaggatggatgagtgacaatggtggcggaaagtgct 14080418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 371
Target Start/End: Original strand, 14268582 - 14268622
Alignment:
Q  331 ggcgtgtgattagggtgcggttagaggacacatgtacggtg 371  Q
    ||||||||||||||| ||||||||||||||| |||| ||||    
T  14268582 ggcgtgtgattagggagcggttagaggacacgtgtaaggtg 14268622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 20148215 - 20148251
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgct 134  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  20148215 tgaggatggatgagtggcaatgatggcggaaagtgct 20148251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 22184613 - 22184577
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgct 134  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  22184613 tgaggatggatgagtggcaatgatggcggaaagtgct 22184577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 23768203 - 23768259
Alignment:
Q  191 ttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    ||||||||||||||||| |||||||| | ||||||| | | ||||||||| ||||||    
T  23768203 ttagcactccaatgctcaagtcagtaattgaactgaaagatagtgtgtaagaagtgt 23768259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 161 - 362
Target Start/End: Original strand, 18322923 - 18323125
Alignment:
Q  161 gcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaa 259  Q
    ||||| ||||||||||||||||||| || |||| |||||||| |||| |||||||| | ||||||||||||| |||||| ||| || || ||||||||||    
T  18322923 gcggtggaacaaaaggtgcatgcagacatgttaacactccaacgctcaagtcagtaatagaactgagaaagattgtgtagaaaatgttgtgaaaagtgaa 18323022  T
Q  260 tcatacattgagggtgaagctaagtcaccgttatatagatttgtg-tgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagagga 358  Q
    ||||||||||||| |||||| | |||||| ||||||||    | | |||||||||||||||||||| |   ||||||||||||||||   ||||||||||    
T  18323023 tcatacattgaggatgaagcaaggtcacccttatataggcaagagttgagaataactgcctccgggtttcgcggcgtgtgattaggg-atggttagagga 18323121  T
Q  359 caca 362  Q
    ||||    
T  18323122 caca 18323125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 98 - 345
Target Start/End: Complemental strand, 26917070 - 26916823
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    |||||||||||||||||||| |||||| ||||| ||| | ||||  |||||| |||||||||||  |  |||| ||||||||||  |||||||||||| |    
T  26917070 tgaggatggatgagaggcaacggtggcagaaagggctctagtacagtggcgacgagtcttcgtgatg--gaacgaaaggtgcatttaggcacgttagcgc 26916973  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatata 296  Q
     | || |||| |||||||| ||||||||||| |||||||||| |||||| || ||||||||| |||||| |||||  |||||| | ||| || |||||||    
T  26916972 actaacgctcaagtcagtaatggaactgagagagagtgtgtagaaagtgttgtgaaaagtgagtcataccttgagcatgaagcaatgtcgcccttatata 26916873  T
Q  297 gatttgtg-tgagaataactgcctccgggatatacggcgtgtgattaggg 345  Q
    |    | | |||||||||| |||||| || | | ||||||||||||||||    
T  26916872 ggcgcgcgttgagaataaccgcctccaggttttgcggcgtgtgattaggg 26916823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 102 - 297
Target Start/End: Original strand, 30477564 - 30477758
Alignment:
Q  102 gatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactcca 201  Q
    ||||||||||||||||  |||||||||||||||   ||| | |||| ||||| |||||  ||||   || |||| ||  |||| ||||||||||||||||    
T  30477564 gatggatgagaggcaacagtggcggaaagtgctccagtatggtggcaatgagacttcg--cggtgagacgaaagatgtctgcatgcacgttagcactcca 30477661  T
Q  202 atgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatag 297  Q
    | |||| ||||||||  | ||||||||||||||||||| |||||| || |||||||||||||||| ||||||||||||  | |||||| ||||||||    
T  30477662 acgctcaagtcagtaacgaaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagtaatgtcacccttatatag 30477758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 23269165 - 23269311
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    |||| |||||| ||||||||| || ||||||| |||| ||||||| ||||||||||||||  |||||| |||| |||||||  | |||||| ||||||||    
T  23269165 tgagtatggataagaggcaatagttgcggaaaatgctctggtacggtggcgatgagtctt--tgcggtggaacgaaaggtgtctacaggcaagttagcac 23269262  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 246  Q
    |||||  ||  |||||||| ||||||||| |||||||||||| ||||||    
T  23269263 tccaacacttaagtcagtaatggaactgataaagagtgtgtagaaagtg 23269311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 85 - 279
Target Start/End: Complemental strand, 17927889 - 17927696
Alignment:
Q  85 ttgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgca 184  Q
    |||||||||  | ||||||||||| |||||||  | |||||||||||| | | ||| | ||||||||| |||| |||  || | || |||||||||||||    
T  17927889 ttgatctgtctggtgaggatggattagaggcagcgatggcggaaagtgttctagtatggtggcgatgactctttgtg--gtgggacgaaaggtgcatgca 17927792  T
Q  185 ggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtga-gaaaagtgaatcatacattgagggtgaagc 279  Q
     ||||||||||||||||| |||  |||||||| |||||||||||  |||| |||| ||||||| | |||| ||||||||||| || ||||||||||    
T  17927791 tgcacgttagcactccaacgcttaagtcagtaatggaactgagattgagtatgtagaaagtgttatgaaaggtgaatcataccttaagggtgaagc 17927696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 172 - 297
Target Start/End: Original strand, 13754749 - 13754875
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    |||||||| ||| ||||||||| |||| ||  |||| |||||||| || ||||||||||||||||||| |||||| || | |||||||||| ||| ||||    
T  13754749 aaaggtgcctgctggcacgttaacactacatcgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtgaatcctaccttga 13754848  T
Q  271 gggtgaagctaagtcaccgttatatag 297  Q
    |||||||||||||||||  ||||||||    
T  13754849 gggtgaagctaagtcactcttatatag 13754875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 172 - 294
Target Start/End: Complemental strand, 23963554 - 23963432
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgag 271  Q
    ||||| ||||| ||| ||||||||| | |||||||| ||||||||| |||| |||||  || ||||| |||| |||| |||||||||||||||| ||| |    
T  23963554 aaaggcgcatgtaggtacgttagcatttcaatgctcaagtcagtatgggaaatgagatggaatgtgtgaaaaatgtgggaaaagtgaatcatacgttggg 23963455  T
Q  272 ggtgaagctaagtcaccgttata 294  Q
    ||||||||||||||||| |||||    
T  23963454 ggtgaagctaagtcacccttata 23963432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 433
Target Start/End: Complemental strand, 37709365 - 37709166
Alignment:
Q  231 gagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatac 330  Q
    |||||||||||||||||| |||||||||||||| |  ||| | ||||| ||||||||| |||||| ||| | |||||||||||| || | || || ||      
T  37709365 gagtgtgtaaaaagtgtgggaaaagtgaatcatcc--tgaag-tgaagttaagtcacctttatatggatgtatgtgagaataaccgctttcgtgagatgt 37709269  T
Q  331 ggcgtgtgattagggtgcggttagaggacacatgtacggtgtatgatgcacagaggcgtgctctaatgtggtatggtgcactgacgttggcgtgttcctt 430  Q
    ||||  ||||||||  |||||||||||||||||||| ||||| |||||||| | ||| ||||| | ||  ||| ||||||||||   ||||||||| |||    
T  37709268 ggcgcatgattaggaggcggttagaggacacatgtatggtgtctgatgcacgggggcatgctccagtggagtaaggtgcactgatactggcgtgttactt 37709169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 98 - 277
Target Start/End: Original strand, 15057955 - 15058132
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    ||||||||||||||||||||  ||| ||||||||| |   ||||| || ||||||||||| |||  || |||| ||||||||||||||||||||||||||    
T  15057955 tgaggatggatgagaggcaacagtgacggaaagtg-tccagtacggtgacgatgagtctttgtg--gtggaacgaaaggtgcatgcaggcacgttagcac 15058051  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattgagggtgaa 277  Q
    | ||| || | ||| |||| || || ||||||| | |||||| ||||||| | ||||| | |||||||| |||||||||||    
T  15058052 tacaacgcacaagttagtaatgaaattgagaaaaaatgtgtagaaagtgtggtgaaaaataaatcataccttgagggtgaa 15058132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 277
Target Start/End: Complemental strand, 6928174 - 6928084
Alignment:
Q  188 acgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaa 277  Q
    ||||||||| | |||  ||| |||||||| |||||||||||||||||||||| |||||| || |||||||||||||||| |||||||||||    
T  6928174 acgttagcatttcaacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaa 6928084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 98 - 246
Target Start/End: Complemental strand, 1909880 - 1909734
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    ||||||| |||||||| ||||||| | ||| |||| | ||||||| |||  | |||||||  ||| || |||| |||||||||||||| ||||||||||     
T  1909880 tgaggatagatgagagccaatggtcgaggagagtgatctggtacggtggtaacgagtctt--tgcagtggaacgaaaggtgcatgcagacacgttagcat 1909783  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 246  Q
    | ||| |||  |||||||| || |||||||||||||||||| |||||||    
T  1909782 ttcaacgctaaagtcagtaatgaaactgagaaagagtgtgtgaaaagtg 1909734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 172 - 297
Target Start/End: Complemental strand, 3459584 - 3459458
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt--gagaaaagtgaatcatacattg 269  Q
    |||||||| ||||||||||||||||||||   |||| |||||||| |||||||||| ||||||||||| |||||||  | ||||||| |||| ||| |||    
T  3459584 aaaggtgcctgcaggcacgttagcactccggcgctcaagtcagtaatggaactgagcaagagtgtgtagaaagtgttggtgaaaagtaaatcgtaccttg 3459485  T
Q  270 agggtgaagctaagtcaccgttatatag 297  Q
    | |||||||| |  ||||| ||||||||    
T  3459484 a-ggtgaagcaagttcacccttatatag 3459458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 172 - 278
Target Start/End: Original strand, 24507448 - 24507555
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    |||||||  |||| ||||||||| ||||||| | || ||||| || ||||| ||||||||||||| || |||||| || |||||||||||||||| ||||    
T  24507448 aaaggtgtctgcatgcacgttagtactccaacgatcaagtcaataatggaaatgagaaagagtgtctagaaagtgttgtgaaaagtgaatcataccttga 24507547  T
Q  271 gggtgaag 278  Q
    ||||||||    
T  24507548 gggtgaag 24507555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 288
Target Start/End: Original strand, 13764980 - 13765097
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    |||||||  |||||||||||||  ||||||||| || ||| |||| || ||||||||||||||||||| |||||| || | ||||||||| ||   ||||    
T  13764980 aaaggtgtctgcaggcacgttaagactccaatgttcaagtgagtaatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtgaataatgtcttga 13765079  T
Q  271 gggtgaagctaagtcacc 288  Q
     |||||||||||||||||    
T  13765080 aggtgaagctaagtcacc 13765097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 17698348 - 17698277
Alignment:
Q  209 agtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagc 279  Q
    |||||||| |||||| ||||||||||||||| |||||| || ||||||||||| |||| |||||||||||||    
T  17698348 agtcagtaatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtgaattatactttgagggtgaagc 17698277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 279
Target Start/End: Original strand, 21416746 - 21416837
Alignment:
Q  189 cgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagc 279  Q
    |||||||||||| | |||| |||||||| || ||||||||||||||||||| |||||| || ||||| |||||| ||| || ||||||||||    
T  21416746 cgttagcactccgacgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgaaaaatgaatcgtaccttaagggtgaagc 21416837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 24677678 - 24677612
Alignment:
Q  181 tgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    |||| ||| |||||||||||||||||| |||||||||||||||||||| |||  |||||| ||||||    
T  24677678 tgcaagcatgttagcactccaatgctcaagtcagtattggaactgagagagaaagtgtaagaagtgt 24677612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 17319747 - 17319657
Alignment:
Q  145 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagca---ctccaatgctctagtcagtattggaactgagaaagagt 234  Q
    |||||||||||||||||  || |||| ||||||||||||||||| |||||||   |||  ||| || |||||||| |||||||||||||||||    
T  17319747 ggcgatgagtcttcgtg--gtggaacgaaaggtgcatgcaggcatgttagcagcactctgatgttcaagtcagtaatggaactgagaaagagt 17319657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Complemental strand, 14666951 - 14666911
Alignment:
Q  160 tgcggtagaacaaaaggtgcatgcaggcacgttagcactcc 200  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  14666951 tgcggtggaacaaaaggtgcctgcaggcacgttagcactcc 14666911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 24576688 - 24576608
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    |||| |||||||| ||||||||||||| |||||  | |||| |||||||| ||||||| | || |||||||||| ||||||    
T  24576688 gaacgaaaggtgcctgcaggcacgttaacactctgacgctcaagtcagtaatggaactaaaaatgagtgtgtaagaagtgt 24576608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 23497304 - 23497205
Alignment:
Q  101 ggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactcc 200  Q
    |||||||||||||||||  |||||||||| | ||  |||||| ||||||||||||||  ||| || |||| ||||||   |||| ||| |||||||||||    
T  23497304 ggatggatgagaggcaacagtggcggaaaatactcaggtacggtggcgatgagtctt--tgcagtggaacgaaaggtatctgcacgcatgttagcactcc 23497207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 5859815 - 5859872
Alignment:
Q  181 tgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgt 238  Q
    ||||| |||||||||||||||| |||| ||||| || ||||||| ||||| |||||||    
T  5859815 tgcagacacgttagcactccaacgctcaagtcaataatggaactaagaaatagtgtgt 5859872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 24070880 - 24070936
Alignment:
Q  209 agtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcata 264  Q
    |||||||| ||||||| |||||||||||||| |||||| || || ||||||||||||    
T  24070880 agtcagtaatggaactaagaaagagtgtgtagaaagtgttgtgagaagtgaatcata 24070936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 98 - 298
Target Start/End: Original strand, 7804 - 8003
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    ||||||||||||||||||||  |||||| ||||| || |  |||| |||||||||||||||   |||| |||  ||||||||||| ||||||||||||||    
T  7804 tgaggatggatgagaggcaaaagtggcgaaaagtactctattacggtggcgatgagtcttca--cggtggaaggaaaggtgcatgtaggcacgttagcac 7901  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatata 296  Q
    || || |||| | |||||| || || |||||||||||||||| |||||| || |||||||||||||||  ||||| ||||| | | |||||| |||||||    
T  7902 tctaacgctcaaatcagtaatgcaattgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataatttgagtgtgaaacaatgtcaccattatata 8001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 175 - 448
Target Start/End: Original strand, 149141 - 149414
Alignment:
Q  175 ggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggt 274  Q
    |||||||| ||| ||||||||| | ||||||   ||| |||||||||| |||||| ||||||||||||| | ||  ||||||||||||||| ||| ||||    
T  149141 ggtgcatgtaggaacgttagcatttcaatgccgaagtgagtattggaaatgagaaggagtgtgtaaaaaatatggaaaaagtgaatcataccttgggggt 149240  T
Q  275 gaagctaagtcaccgttatatagatttgtgtgagaataactgcctccgggatatacggcgtgtgattagggtgcggttagaggacacatgtacggtgtat 374  Q
    |||| ||||||||| |||||||| | ||||  |||||||| || |||| || || ||| |  ||||||||  |||| |||||||||| || | |||||      
T  149241 gaagttaagtcacccttatataggtgtgtgctagaataaccgcttccgtgagatgcggagcatgattaggacgcgggtagaggacacgtgcatggtgtcc 149340  T
Q  375 gatgcacagaggcgtgctctaatgtggtatggtgcactgacgttggcgtgttccttcaggcgatgcgccttagt 448  Q
    ||||||| | | ||| ||  | || |||| ||||||||||  |||| || ||||||||| ||||||||||||||    
T  149341 gatgcacggggacgtacttcagtggggtaaggtgcactgatattggtgtattccttcagtcgatgcgccttagt 149414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 172 - 297
Target Start/End: Original strand, 13913 - 14039
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    ||||||||||| | ||||||||| ||||||| |||| |||||||| || ||||||||||||||||||| |||||| || || ||||||||||||| ||||    
T  13913 aaaggtgcatgaatgcacgttagtactccaaagctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgagaagtgaatcataccttga 14012  T
Q  271 gggtgaagctaagtcaccgttatatag 297  Q
    ||||||||| |  ||||| ||||||||    
T  14013 gggtgaagcaagatcacccttatatag 14039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 169 - 297
Target Start/End: Complemental strand, 95913 - 95784
Alignment:
Q  169 acaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacat 267  Q
    ||||||||| | ||||||||||||| |||| ||| |||| ||| |||| |||||||||||||||||| ||| |||||| || |||||||||||||||| |    
T  95913 acaaaaggttcctgcaggcacgttaccacttcaacgctcaagttagtaatggaactgagaaagagtgcgtagaaagtgttgtgaaaagtgaatcatacct 95814  T
Q  268 tgagggtgaagctaagtcaccgttatatag 297  Q
    | |||||||||| | |||||| ||||||||    
T  95813 tcagggtgaagcaacgtcacccttatatag 95784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 84 - 298
Target Start/End: Complemental strand, 2312020 - 2311807
Alignment:
Q  84 attgatctgttcgatgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgc 183  Q
    |||||| ||| || |||| |||||||||||||||  |||||| ||||||||  |||||| |||||| ||||||||||  ||| |||  |||||||  |||    
T  2312020 attgatatgtccggtgagtatggatgagaggcaacagtggcgcaaagtgctccggtacggtggcgaagagtcttcgt--ggtggaatgaaaggtgtctgc 2311923  T
Q  184 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaa 282  Q
    ||  ||||||||||||||| |||| | |||| |  |||  ||||||||| |||||| |||||| || |||| ||||||||||| ||||||||||||| |     
T  2311922 agatacgttagcactccaacgctcaaatcagcaagggatttgagaaagaatgtgtagaaagtgttgtgaaaggtgaatcataccttgagggtgaagcaat 2311823  T
Q  283 gtcaccgttatataga 298  Q
    |||||| |||| ||||    
T  2311822 gtcacccttatttaga 2311807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 167 - 297
Target Start/End: Complemental strand, 9801188 - 9801058
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatac 265  Q
    |||| |||||||| |||| |||||||||||||| ||  ||| |||||||| | |||| ||||||||||||||| ||||||| | ||||||||||||||||    
T  9801188 gaacgaaaggtgcctgcaagcacgttagcactc-aacactcaagtcagtaatagaacagagaaagagtgtgtagaaagtgttgtgaaaagtgaatcatac 9801090  T
Q  266 attgagggtgaagctaagtcaccgttatatag 297  Q
     ||||||||||||| | |||||| ||||||||    
T  9801089 cttgagggtgaagcaatgtcacccttatatag 9801058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 17143837 - 17143743
Alignment:
Q  184 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaa 277  Q
    ||||||||||||||||| | |||| |||||||| |||||||||||||||||||||| |||||| || |||||||||||||||| ||| |||||||    
T  17143837 aggcacgttagcactccgacgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgggggtgaa 17143743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 180 - 278
Target Start/End: Complemental strand, 21342379 - 21342280
Alignment:
Q  180 atgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaag 278  Q
    |||||||||||||| || | ||| |||| |||||||| ||||||||| ||||||||| || |||||| || |||||||||||||||||||||||||||||    
T  21342379 atgcaggcacgttaacagtacaacgctcaagtcagtaatggaactgataaagagtgtatagaaagtgttgtgaaaagtgaatcatacattgagggtgaag 21342280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 209 - 277
Target Start/End: Complemental strand, 28715551 - 28715482
Alignment:
Q  209 agtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaa 277  Q
    |||||||| |||||||||||||||||||||| |||||| || |||||||||||||||| |||||||||||    
T  28715551 agtcagtaatggaactgagaaagagtgtgtataaagtgttgtgaaaagtgaatcataccttgagggtgaa 28715482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 184 - 278
Target Start/End: Original strand, 30606931 - 30607026
Alignment:
Q  184 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaag 278  Q
    ||||| ||||||| ||||| |||| |||||||| ||||| |||||||||||| ||| |||||| || ||||||||||| |||| ||||||||||||    
T  30606931 aggcatgttagcattccaacgctcaagtcagtaatggaattgagaaagagtgagtagaaagtgttgtgaaaagtgaattataccttgagggtgaag 30607026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 172 - 297
Target Start/End: Original strand, 12516176 - 12516302
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    |||||||| ||||| |||||||||||||| | |||| ||| |||| ||||||||||||||| ||||||| ||||| || |||||||||    ||| ||||    
T  12516176 aaaggtgcctgcagacacgttagcactccgacgctcaagttagtaatggaactgagaaagattgtgtaataagtgttgtgaaaagtgatatgtaccttga 12516275  T
Q  271 gggtgaagctaagtcaccgttatatag 297  Q
    ||||||||| |  ||||| ||||||||    
T  12516276 gggtgaagcaagttcacctttatatag 12516302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 184 - 297
Target Start/End: Original strand, 16704405 - 16704519
Alignment:
Q  184 aggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt-gagaaaagtgaatcatacattgagggtgaagctaa 282  Q
    ||||||||| ||| ||||| |||  |||||||| ||||  |||||||||| ||||| ||||||| | |||||||||||||||| ||||||||||||| |     
T  16704405 aggcacgttggcattccaacgctgaagtcagtaatggagttgagaaagagagtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaag 16704504  T
Q  283 gtcaccgttatatag 297  Q
     ||||| ||||||||    
T  16704505 ttcacccttatatag 16704519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 21649378 - 21649471
Alignment:
Q  144 tggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgta 239  Q
    ||||||||||||||||  |||| |||| |||||||| |||| |||||||||||| |||| | || |||||||| ||||||||||| ||| ||||||    
T  21649378 tggcgatgagtcttcg--cggtggaacgaaaggtgcctgcaagcacgttagcaccccaacgatcaagtcagtaatggaactgagagagaatgtgta 21649471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 297
Target Start/End: Complemental strand, 30430047 - 30429875
Alignment:
Q  122 ggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattgga 221  Q
    |||||||||||||  |||||| |||||| |||||||  ||| |  | || |||||||||||||||||| ||||||||| ||  ||| |||| ||   |||    
T  30430047 ggcggaaagtgctccggtacggtggcgacgagtctttatgctg--ggacgaaaggtgcatgcaggcacattagcactctaagactcgagtctgtgaggga 30429950  T
Q  222 actgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatag 297  Q
    | |||    || ||||||||||||||| |||| ||||||||||| || ||||||||||||||||||  ||||||||    
T  30429949 aatgatgtggaatgtgtaaaaagtgtgggaaa-gtgaatcatactttaagggtgaagctaagtcactcttatatag 30429875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 297
Target Start/End: Complemental strand, 14860225 - 14860073
Alignment:
Q  144 tggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaa 243  Q
    ||||||||| ||||||||  || |||| |||||||| ||||||||| |||||||||  || ||| | |||||| ||||||||||||| ||| ||||| ||    
T  14860225 tggcgatgaatcttcgtg--gtggaacgaaaggtgcttgcaggcacattagcactctgattctcaactcagtaatggaactgagaaacagtttgtaagaa 14860128  T
Q  244 gtg-tgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatag 297  Q
    ||| || |||||||||    ||| ||||||||||||| |  ||||| ||||||||    
T  14860127 gtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatatag 14860073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 172 - 293
Target Start/End: Complemental strand, 8123014 - 8122893
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||| || || ||| ||| | | |||  |||| | || |||||||||||||||| ||||    
T  8123014 aaaggtgtatgcaggcacgttagcactccaacgctcaagtcagtaatgaaattga-aaaaactatgtcgaaagcgttgtgaaaagtgaatcataccttga 8122916  T
Q  271 gggtgaagctaagtcaccgttat 293  Q
    ||||||||| | |||||| ||||    
T  8122915 gggtgaagcaatgtcacccttat 8122893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 172 - 265
Target Start/End: Complemental strand, 9007876 - 9007783
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatac 265  Q
    |||||||| ||||||||||||| |||||||| |||| ||||||||| | || | |||  || ||||| ||||||||| ||||| ||||||||||    
T  9007876 aaaggtgcctgcaggcacgttaacactccaacgctcaagtcagtatggaaaataagatggaatgtgtgaaaagtgtgggaaaattgaatcatac 9007783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 261
Target Start/End: Complemental strand, 28723946 - 28723784
Alignment:
Q  98 tgaggatggatgagaggcaatggtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcac 197  Q
    ||||||||||||||||| ||  ||| || |||||| |  |||||| |||| |||||||||||  |||| |||| ||| ||||    ||||||||| |||     
T  28723946 tgaggatggatgagaggtaacagtgacgaaaagtgttccggtacggtggcaatgagtcttcg--cggtggaacgaaatgtgctaataggcacgttggcaa 28723849  T
Q  198 tccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatc 261  Q
    ||||| |||| ||||| || ||||||| |||||||||||||| ||| || || ||||||||||||    
T  28723848 tccaacgctcaagtcactaatggaactaagaaagagtgtgtagaaaatgttgtgaaaagtgaatc 28723784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 279
Target Start/End: Complemental strand, 431416 - 431308
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    |||||||| | ||| |||||||||||| | | |||| ||||| || |||||||||||||||||| ||  |||||| || |||||||||||  | | ||||    
T  431416 aaaggtgcctacagacacgttagcacttcgacgctcaagtcaataatggaactgagaaagagtgcgtggaaagtgctgtgaaaagtgaattgtcccttga 431317  T
Q  271 gggtgaagc 279  Q
    |||||||||    
T  431316 gggtgaagc 431308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 12251954 - 12252047
Alignment:
Q  145 ggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaa 240  Q
    |||||||||||||||  |  ||| |||||||||||||||||||| ||||||||||  |  ||| ||||||||  | || |||||||||||||||||    
T  12251954 ggcgatgagtcttcg--caataggacaaaaggtgcatgcaggcatgttagcactctgacactcaagtcagtaacgaaaatgagaaagagtgtgtaa 12252047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 6129500 - 6129550
Alignment:
Q  244 gtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttata 294  Q
    |||||||||||||||||| ||  ||| |||||||||||||||||| |||||    
T  6129500 gtgtgagaaaagtgaatcgtatcttgggggtgaagctaagtcacccttata 6129550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 12108410 - 12108475
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtg 237  Q
    ||||||||||||| ||| |||| |||||| | |||| ||| |||| ||||||||||||||| ||||    
T  12108410 aaaggtgcatgcatgcatgttaccactccgacgctcaagttagtaatggaactgagaaagaatgtg 12108475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 28715658 - 28715621
Alignment:
Q  95 cgatgaggatggatgagaggcaatggtggcggaaagtg 132  Q
    |||||||||||||||||||||||  |||||||||||||    
T  28715658 cgatgaggatggatgagaggcaaaagtggcggaaagtg 28715621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 38944662 - 38944618
Alignment:
Q  252 aaagtgaatcatacattgagggtgaagctaagtcaccgttatata 296  Q
    ||||||| |||||| |||||||||| ||||||||||| |||||||    
T  38944662 aaagtgagtcatactttgagggtgacgctaagtcacccttatata 38944618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 167 - 314
Target Start/End: Complemental strand, 69329 - 69183
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcataca 266  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||| | |||| |||||  || ||||| ||||||||| ||||| ||||||||||     
T  69329 gaacaaaaggtgcctgcaggcacgttagcactccaacgctcaagtcagtgtaggaaatgagatggaatgtgtgaaaagtgtgggaaaattgaatcatacc 69230  T
Q  267 ttgagggtgaagctaagtcaccgttatatagatttgtgtgagaataac 314  Q
     || || |||||||| |||||| ||||||||   |||| |||||||||    
T  69229 ctg-ggctgaagctatgtcacccttatataggcgtgtgagagaataac 69183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 187 - 297
Target Start/End: Complemental strand, 15515 - 15404
Alignment:
Q  187 cacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtc 285  Q
    |||||||||||||| | |||| |||||||| ||||||||||||||||| | || |||||| || |||||||||||||||| ||||||||||||| |  ||    
T  15515 cacgttagcactccgacgctccagtcagtaatggaactgagaaagagtatctagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttc 15416  T
Q  286 accgttatatag 297  Q
    ||| ||||||||    
T  15415 acccttatatag 15404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 160 - 277
Target Start/End: Complemental strand, 8688 - 8571
Alignment:
Q  160 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtga 258  Q
    |||||| ||| ||||||||  ||||| |||||||||||| | | |||| |||||||| || |||||| ||| |||||||| |||||| || |||||||||    
T  8688 tgcggtggaataaaaggtgtttgcag-cacgttagcacttcgacgctcaagtcagtaatgaaactgaaaaacagtgtgtagaaagtgttgtgaaaagtga 8590  T
Q  259 atcatacattgagggtgaa 277  Q
    ||||||| || ||||||||    
T  8589 atcataccttaagggtgaa 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 247
Target Start/End: Complemental strand, 11027 - 10940
Alignment:
Q  160 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |||| ||||| || ||||||||| | ||||||||||| ||||||    
T  11027 tgcggtggaacaaaaggtgtatgcaggcacgttagcactccaacgctcaagtcaataatggaactgaaagagagtgtgtaagaagtgt 10940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 172 - 279
Target Start/End: Original strand, 22877 - 22985
Alignment:
Q  172 aaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattga 270  Q
    |||||||| ||| |||||||||||||||  | |||| |||||||| |||||||||||||  |||||||| ||||| || |||||||||    ||| ||||    
T  22877 aaaggtgcctgcgggcacgttagcactctgacgctcaagtcagtaatggaactgagaaatcgtgtgtaagaagtgttgtgaaaagtgacgtgtaccttga 22976  T
Q  271 gggtgaagc 279  Q
    |||||||||    
T  22977 gggtgaagc 22985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 120 - 314
Target Start/End: Complemental strand, 18620 - 18428
Alignment:
Q  120 gtggcggaaagtgctatggtacgttggcgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattg 219  Q
    ||||| |||||||||  |||||| |||||||||||||||   ||||  ||| ||| || | ||||| ||| ||||||||||||  ||| ||||||||| |    
T  18620 gtggcagaaagtgctccggtacggtggcgatgagtcttca--cggtgaaacgaaatgttcctgcagacactttagcactccaacactcaagtcagtatag 18523  T
Q  220 gaactgagaaagagtgtgtaaaaagtgtgagaaaagtgaatcatacattgagggtgaagctaagtcaccgttatatagatttgtgtgagaataac 314  Q
    | | | |||| ||||||||| |||||||   |||| |||||||||| ||  || ||||||||||||||| |||||||| | ||||||||||||||    
T  18522 ggaataagaaggagtgtgtacaaagtgtagaaaaaatgaatcataccttcgggttgaagctaagtcacccttatataggtgtgtgtgagaataac 18428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 6284 - 6397
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatac 265  Q
    ||||||||||||  |||||||||||||||||| | | |||| |||||||| ||||||||||||| |||||||| |||||| || ||||||||| || |||    
T  6284 gaacaaaaggtgtttgcaggcacgttagcacttcgaagctcaagtcagtaatggaactgagaaatagtgtgtagaaagtgttgtgaaaagtgagtcgtac 6383  T
Q  266 attgagggtgaagc 279  Q
     ||||| |||||||    
T  6384 cttgagcgtgaagc 6397  T

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Target: scaffold0054 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 297
Target Start/End: Complemental strand, 68892 - 68776
Alignment:
Q  180 atgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaag 278  Q
    |||||| |||||||||||||||| |||| ||| |||| |||||||||||||||  || || |||||| || |||||||||||||||| ||||||| ||||    
T  68892 atgcagacacgttagcactccaacgctcaagttagtaatggaactgagaaaga--gtatagaaagtgttgtgaaaagtgaatcataccttgagggagaag 68795  T
Q  279 ctaagtcaccgttatatag 297  Q
    | | |||||| ||||||||    
T  68794 caaggtcacccttatatag 68776  T

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Target: scaffold0103 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 279
Target Start/End: Original strand, 40778 - 40895
Alignment:
Q  163 ggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgtga-gaaaagtgaatc 261  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||| |||||||  ||||||||| | |||| |||||  |||||| | |||||||||       
T  40778 ggtagaacgaaaggcgcatgcaggcacgttagcactccaacgctcaagtcagtgatggaactgaaagagagagtgtaggaagtgttatgaaaagtgatgt 40877  T
Q  262 atacattgagggtgaagc 279  Q
     ||| |||||||||||||    
T  40878 gtaccttgagggtgaagc 40895  T

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Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 187 - 297
Target Start/End: Complemental strand, 121096 - 120985
Alignment:
Q  187 cacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatcatacattgagggtgaagctaagtc 285  Q
    |||||||| ||||  |||||  |||||||| |||||||||||||||||||||| |||||| || |||||||||    ||| ||||||||||||| || ||    
T  121096 cacgttagtactctgatgcttaagtcagtaatggaactgagaaagagtgtgtataaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaaattc 120997  T
Q  286 accgttatatag 297  Q
    ||| ||||||||    
T  120996 acccttatatag 120985  T

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Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 279
Target Start/End: Original strand, 379684 - 379815
Alignment:
Q  147 cgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 246  Q
    |||||||||||||  |||| |||| ||||||||||  |||||||||||||||   |  ||  |||||||| ||||||||||||||||||||||| |||||    
T  379684 cgatgagtcttcg--cggtggaacgaaaggtgcatctaggcacgttagcactttgacactgaagtcagtaatggaactgagaaagagtgtgtaagaagtg 379781  T
Q  247 -tgagaaaagtgaatcatacattgagggtgaagc 279  Q
     || |||||||||    ||| |||||||||||||    
T  379782 ttgtgaaaagtgatgtgtaccttgagggtgaagc 379815  T

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Target: scaffold0294 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 326 - 268
Alignment:
Q  189 cgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    |||||||||||| | |||| |||||||| ||||||||||||||||||||||| ||||||    
T  326 cgttagcactccgacgctcaagtcagtaatggaactgagaaagagtgtgtaagaagtgt 268  T

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Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 164 - 344
Target Start/End: Original strand, 215255 - 215437
Alignment:
Q  164 gtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtgaatca 262  Q
    ||||||| |||| ||  |||||||||||||||| ||||| |||| |||||||| || |||||| | ||||||||||| ||||| || ||||||||         
T  215255 gtagaacgaaagttgtctgcaggcacgttagcaatccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtgttgtg 215354  T
Q  263 tacattgagggtgaagctaagtcaccgttatatagatttgtg-tgagaataactgcctccgggatatacggcgtgtgattagg 344  Q
    ||| ||||||||||||| |  ||| | ||||||||   |||| |||  ||||||| ||||||| ||| |||||||||||||||    
T  215355 taccttgagggtgaagcaagttcatccttatatagccgtgtgttgatcataactgtctccgggttatgcggcgtgtgattagg 215437  T

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Target: scaffold0057 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 279
Target Start/End: Complemental strand, 73914 - 73794
Alignment:
Q  160 tgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgagaaaagtga 258  Q
    |||||| ||||||||||||||| |||||| ||||||||||  | |||| | | |||| ||||  ||| |||||||| ||| |||||| || ||||||| |    
T  73914 tgcggtggaacaaaaggtgcattcaggcatgttagcactctgacgctcaaattagtaatggatttgaaaaagagtgcgtagaaagtgttgtgaaaagtaa 73815  T
Q  259 atcatacattgagggtgaagc 279  Q
    ||||||| || ||||||||||    
T  73814 atcataccttcagggtgaagc 73794  T

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Target: scaffold0074 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 279
Target Start/End: Original strand, 35248 - 35353
Alignment:
Q  176 gtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg-tgag-aaaagtgaatcatacattgaggg 273  Q
    |||| |||||||||||||||||||  |  ||| ||||||||  ||||||||||||||||||||  |||||| || | ||||||||||||| | |||||||    
T  35248 gtgcttgcaggcacgttagcactctgacactcaagtcagtaacggaactgagaaagagtgtgtggaaagtgttgtgaaaaagtgaatcatcctttgaggg 35347  T
Q  274 tgaagc 279  Q
     |||||    
T  35348 ggaagc 35353  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 247
Target Start/End: Complemental strand, 21714 - 21643
Alignment:
Q  176 gtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    |||| ||| ||||||||||||||||||  ||| ||||||||||| |||||| | ||||||| ||| ||||||    
T  21714 gtgcctgcgggcacgttagcactccaacactcaagtcagtattgaaactgaaagagagtgtttaagaagtgt 21643  T

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Target: scaffold0174 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 263
Target Start/End: Complemental strand, 29398 - 29286
Alignment:
Q  148 gatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg- 246  Q
    ||||||||||||  |||| |||| ||||||||||| || || ||||||||||||| |||| |||||||| || || | || ||||  ||||| ||||||     
T  29398 gatgagtcttcg--cggtggaacgaaaggtgcatggagtcatgttagcactccaacgctcaagtcagtaatgaaaataaggaaga--gtgtagaaagtgt 29303  T
Q  247 tgagaaaagtgaatcat 263  Q
    || ||||||||||||||    
T  29302 tgtgaaaagtgaatcat 29286  T

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Target: scaffold0380 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 247
Target Start/End: Complemental strand, 6983 - 6885
Alignment:
Q  147 cgatgagtcttcgtgcggtagaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtg 246  Q
    |||||||||||||||  || |||| |||| |||  | |||||||||||  |||  | |||| ||||||||||| ||||||||| |||||||||| |||||    
T  6983 cgatgagtcttcgtg--gtggaacgaaagatgctggtaggcacgttaggtctctgacgctcaagtcagtattgaaactgagaacgagtgtgtaagaagtg 6886  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 4529 - 4449
Alignment:
Q  167 gaacaaaaggtgcatgcaggcacgttagcactccaatgctctagtcagtattggaactgagaaagagtgtgtaaaaagtgt 247  Q
    |||| |||||||  |||| ||||||||||||||||| |||| ||||| || || |||||| | |||| |||||| ||||||    
T  4529 gaacgaaaggtgtctgcaagcacgttagcactccaacgctcaagtcactaatgaaactgaaagagagagtgtaagaagtgt 4449  T

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