View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19786_low_40 (Length: 444)

Name: NF19786_low_40
Description: NF19786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19786_low_40
NF19786_low_40
[»] chr7 (28 HSPs)
chr7 (22-308)||(8146792-8147079)
chr7 (313-436)||(22661362-22661485)
chr7 (311-436)||(27480719-27480844)
chr7 (311-427)||(27479990-27480106)
chr7 (311-420)||(37284112-37284221)
chr7 (311-420)||(37289298-37289407)
chr7 (311-410)||(12930775-12930874)
chr7 (311-436)||(12643103-12643228)
chr7 (311-427)||(4226128-4226244)
chr7 (311-410)||(7158234-7158333)
chr7 (311-410)||(12929290-12929389)
chr7 (311-425)||(4227155-4227269)
chr7 (306-427)||(12644114-12644235)
chr7 (311-424)||(38643553-38643666)
chr7 (311-425)||(45915791-45915905)
chr7 (311-436)||(47558033-47558158)
chr7 (311-410)||(43937897-43937996)
chr7 (311-436)||(45914529-45914652)
chr7 (311-410)||(37563636-37563735)
chr7 (311-386)||(38644682-38644757)
chr7 (311-410)||(43938176-43938275)
chr7 (337-408)||(26830025-26830096)
chr7 (313-412)||(31695610-31695709)
chr7 (353-420)||(40022517-40022584)
chr7 (337-410)||(37563383-37563456)
chr7 (311-410)||(26825633-26825732)
chr7 (337-408)||(26828504-26828575)
chr7 (346-410)||(12931020-12931084)
[»] chr3 (28 HSPs)
chr3 (311-436)||(48189071-48189196)
chr3 (311-436)||(2944638-2944763)
chr3 (311-436)||(45279256-45279381)
chr3 (311-426)||(11026614-11026729)
chr3 (313-436)||(45278549-45278672)
chr3 (313-436)||(48188383-48188506)
chr3 (311-436)||(1756553-1756678)
chr3 (311-425)||(1757287-1757401)
chr3 (311-436)||(43105236-43105361)
chr3 (321-426)||(43105816-43105921)
chr3 (313-424)||(37249204-37249315)
chr3 (313-436)||(37249770-37249892)
chr3 (311-420)||(22736678-22736787)
chr3 (331-427)||(11025960-11026056)
chr3 (313-420)||(44481941-44482048)
chr3 (311-427)||(32717086-32717202)
chr3 (313-436)||(29192040-29192163)
chr3 (313-420)||(44476054-44476161)
chr3 (311-427)||(2943916-2944032)
chr3 (311-436)||(29192965-29193090)
chr3 (352-420)||(22735403-22735471)
chr3 (322-410)||(22129020-22129108)
chr3 (311-410)||(10998155-10998254)
chr3 (322-410)||(53037041-53037129)
chr3 (311-410)||(1741390-1741489)
chr3 (337-408)||(55036698-55036769)
chr3 (331-408)||(46670539-46670616)
chr3 (346-410)||(40256912-40256976)
[»] chr8 (37 HSPs)
chr8 (311-436)||(34665773-34665898)
chr8 (311-436)||(34214500-34214626)
chr8 (313-436)||(34666513-34666635)
chr8 (311-420)||(33497604-33497713)
chr8 (311-427)||(34213767-34213883)
chr8 (311-420)||(38598967-38599076)
chr8 (312-420)||(33497020-33497128)
chr8 (301-420)||(1231519-1231638)
chr8 (311-410)||(25288074-25288173)
chr8 (311-412)||(27437515-27437616)
chr8 (322-412)||(7393141-7393231)
chr8 (311-419)||(1232788-1232894)
chr8 (311-412)||(27436566-27436667)
chr8 (313-412)||(4970130-4970229)
chr8 (313-420)||(24377186-24377293)
chr8 (311-410)||(25287795-25287894)
chr8 (350-412)||(7392250-7392312)
chr8 (303-410)||(36623346-36623454)
chr8 (313-412)||(29574747-29574846)
chr8 (311-410)||(36623635-36623734)
chr8 (311-410)||(41801819-41801918)
chr8 (311-410)||(43866714-43866813)
chr8 (311-377)||(4463457-4463523)
chr8 (337-410)||(7675-7748)
chr8 (327-412)||(9632347-9632432)
chr8 (337-410)||(23424794-23424867)
chr8 (315-420)||(24378984-24379089)
chr8 (331-410)||(11478427-11478506)
chr8 (311-410)||(27857024-27857123)
chr8 (311-410)||(43866993-43867092)
chr8 (322-412)||(40422440-40422530)
chr8 (311-408)||(547434-547530)
chr8 (337-410)||(29190441-29190514)
chr8 (337-410)||(37343064-37343137)
chr8 (358-410)||(20096070-20096122)
chr8 (346-410)||(40525545-40525609)
chr8 (346-410)||(40525789-40525853)
[»] chr6 (22 HSPs)
chr6 (311-436)||(33399969-33400094)
chr6 (311-436)||(14657181-14657306)
chr6 (311-436)||(1661402-1661527)
chr6 (303-426)||(4117529-4117653)
chr6 (311-426)||(4116802-4116917)
chr6 (311-427)||(14656483-14656599)
chr6 (311-427)||(33401107-33401223)
chr6 (311-420)||(17784373-17784482)
chr6 (314-395)||(8427378-8427459)
chr6 (337-410)||(23291773-23291846)
chr6 (311-410)||(13480211-13480310)
chr6 (311-410)||(13480490-13480589)
chr6 (311-410)||(30234874-30234973)
chr6 (337-410)||(5064617-5064690)
chr6 (311-411)||(8427203-8427303)
chr6 (346-410)||(20994973-20995037)
chr6 (311-410)||(5064338-5064437)
chr6 (337-410)||(32337593-32337666)
chr6 (311-410)||(737979-738078)
chr6 (311-410)||(15819772-15819871)
chr6 (311-412)||(1066419-1066519)
chr6 (337-410)||(32337849-32337922)
[»] chr4 (33 HSPs)
chr4 (311-436)||(38814299-38814424)
chr4 (311-436)||(38813557-38813682)
chr4 (311-436)||(56556585-56556710)
chr4 (306-436)||(56557297-56557427)
chr4 (311-436)||(52816395-52816520)
chr4 (311-436)||(52815666-52815791)
chr4 (313-424)||(38982580-38982691)
chr4 (311-420)||(55013077-55013185)
chr4 (311-436)||(23455661-23455786)
chr4 (311-392)||(23454957-23455038)
chr4 (311-412)||(53477076-53477177)
chr4 (311-420)||(54590146-54590255)
chr4 (311-395)||(54591591-54591675)
chr4 (337-412)||(489464-489539)
chr4 (337-412)||(515256-515331)
chr4 (311-410)||(22250015-22250114)
chr4 (299-410)||(33294425-33294536)
chr4 (331-410)||(47862434-47862513)
chr4 (311-410)||(53559669-53559768)
chr4 (311-412)||(13336834-13336935)
chr4 (337-410)||(20086466-20086539)
chr4 (337-410)||(54961460-54961533)
chr4 (322-410)||(34238484-34238572)
chr4 (346-410)||(47862190-47862254)
chr4 (337-412)||(32846391-32846466)
chr4 (311-410)||(53475834-53475933)
chr4 (337-410)||(12691435-12691508)
chr4 (309-410)||(12691687-12691788)
chr4 (367-408)||(33294203-33294244)
chr4 (313-377)||(9254411-9254475)
chr4 (352-412)||(37678128-37678188)
chr4 (346-410)||(47981918-47981982)
chr4 (322-410)||(50245871-50245959)
[»] chr2 (24 HSPs)
chr2 (311-427)||(29957820-29957936)
chr2 (311-436)||(20983233-20983358)
chr2 (311-426)||(20982527-20982642)
chr2 (311-427)||(29958528-29958644)
chr2 (311-420)||(20101773-20101882)
chr2 (311-420)||(20103132-20103241)
chr2 (311-424)||(25623291-25623404)
chr2 (311-436)||(21103089-21103209)
chr2 (311-424)||(25624417-25624530)
chr2 (311-420)||(24387354-24387463)
chr2 (311-388)||(24388276-24388353)
chr2 (353-411)||(19620790-19620848)
chr2 (311-410)||(16366966-16367065)
chr2 (311-408)||(10446835-10446932)
chr2 (337-410)||(16367245-16367318)
chr2 (337-410)||(20911159-20911232)
chr2 (337-412)||(9694022-9694097)
chr2 (311-410)||(32519158-32519257)
chr2 (346-412)||(28599465-28599531)
chr2 (337-410)||(1149966-1150039)
chr2 (337-410)||(1150219-1150292)
chr2 (365-410)||(19619583-19619628)
chr2 (346-410)||(17580366-17580430)
chr2 (313-377)||(43236509-43236573)
[»] chr1 (43 HSPs)
chr1 (313-436)||(46282765-46282888)
chr1 (313-436)||(50062920-50063043)
chr1 (311-436)||(46282074-46282199)
chr1 (311-436)||(49093044-49093169)
chr1 (313-420)||(32619389-32619496)
chr1 (343-436)||(49093785-49093878)
chr1 (311-420)||(51935187-51935296)
chr1 (313-419)||(32622345-32622451)
chr1 (351-436)||(50062246-50062331)
chr1 (311-424)||(25065942-25066055)
chr1 (311-427)||(13295138-13295254)
chr1 (311-411)||(2828196-2828296)
chr1 (313-408)||(6345637-6345732)
chr1 (311-373)||(13295615-13295677)
chr1 (346-411)||(2829536-2829601)
chr1 (311-424)||(25064936-25065049)
chr1 (311-410)||(1047486-1047585)
chr1 (313-412)||(6344260-6344359)
chr1 (337-412)||(10019653-10019728)
chr1 (326-412)||(46545011-46545097)
chr1 (337-410)||(5183788-5183861)
chr1 (311-410)||(1040301-1040400)
chr1 (311-410)||(1047207-1047306)
chr1 (311-410)||(2953746-2953845)
chr1 (313-388)||(32238704-32238779)
chr1 (337-410)||(19755687-19755760)
chr1 (337-410)||(25414873-25414946)
chr1 (331-411)||(28534793-28534874)
chr1 (337-410)||(29043037-29043110)
chr1 (337-410)||(29980920-29980993)
chr1 (337-410)||(46849940-46850013)
chr1 (311-410)||(739222-739321)
chr1 (311-410)||(2953467-2953566)
chr1 (311-410)||(26953104-26953203)
chr1 (311-410)||(29980642-29980741)
chr1 (311-410)||(37152820-37152919)
chr1 (311-410)||(49002879-49002978)
chr1 (322-388)||(24701573-24701639)
chr1 (337-410)||(5926548-5926621)
chr1 (337-410)||(5926803-5926876)
chr1 (337-410)||(37152567-37152640)
chr1 (311-410)||(6056660-6056760)
chr1 (346-410)||(37152471-37152535)
[»] chr5 (37 HSPs)
chr5 (311-436)||(20072841-20072966)
chr5 (311-436)||(39181060-39181185)
chr5 (313-436)||(16532898-16533021)
chr5 (311-427)||(20072124-20072240)
chr5 (311-436)||(16533597-16533722)
chr5 (311-436)||(39181768-39181893)
chr5 (303-427)||(36476760-36476884)
chr5 (313-424)||(36477360-36477471)
chr5 (311-427)||(20856935-20857051)
chr5 (311-427)||(20857528-20857644)
chr5 (313-420)||(21978005-21978112)
chr5 (311-420)||(8654110-8654219)
chr5 (311-436)||(22870434-22870559)
chr5 (315-427)||(22869612-22869724)
chr5 (311-420)||(14744718-14744827)
chr5 (313-420)||(21972095-21972201)
chr5 (311-393)||(31107934-31108016)
chr5 (322-410)||(37945008-37945096)
chr5 (346-410)||(39402146-39402210)
chr5 (306-410)||(25253084-25253188)
chr5 (306-410)||(25316874-25316978)
chr5 (311-410)||(32052227-32052326)
chr5 (337-410)||(14745477-14745550)
chr5 (337-410)||(33735342-33735415)
chr5 (313-412)||(8673754-8673853)
chr5 (337-412)||(21260894-21260969)
chr5 (311-410)||(25253368-25253467)
chr5 (311-410)||(25317159-25317258)
chr5 (311-410)||(32052506-32052605)
chr5 (322-412)||(7015789-7015879)
chr5 (311-377)||(21979002-21979068)
chr5 (337-410)||(33735595-33735668)
chr5 (346-408)||(31108338-31108400)
chr5 (337-410)||(7015537-7015610)
chr5 (337-410)||(14745595-14745668)
chr5 (367-412)||(22024150-22024195)
chr5 (346-410)||(6421904-6421968)
[»] scaffold0182 (2 HSPs)
scaffold0182 (302-412)||(14373-14483)
scaffold0182 (311-420)||(13137-13246)
[»] scaffold0018 (1 HSPs)
scaffold0018 (311-412)||(73112-73213)
[»] scaffold0347 (2 HSPs)
scaffold0347 (311-424)||(13612-13725)
scaffold0347 (311-424)||(14577-14690)
[»] scaffold0009 (2 HSPs)
scaffold0009 (311-408)||(262441-262538)
scaffold0009 (311-411)||(261004-261104)
[»] scaffold1493 (2 HSPs)
scaffold1493 (311-410)||(596-695)
scaffold1493 (311-410)||(875-974)
[»] scaffold0206 (1 HSPs)
scaffold0206 (346-410)||(10363-10427)
[»] scaffold0233 (1 HSPs)
scaffold0233 (337-412)||(8462-8537)
[»] scaffold0201 (1 HSPs)
scaffold0201 (346-410)||(14175-14239)


Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 22 - 308
Target Start/End: Original strand, 8146792 - 8147079
Alignment:
Q  22 ctattgctagatgatgtatccccacatccatgaaacatgcatgcataagatgctaatggcttagtatcaattttatgcatggaaaatgacatggaagatg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||| ||||    
T  8146792 ctattgctagatgatgtatccccacatccatgaaacatgcatgcataatatgctaatggcttagt-tcaatttcatgcatggaaaatgacatggatgatg 8146890  T
Q  122 ggaaacatgcactgcgcatcaaatcttgattttaagataagattgtgactctagattcctcaccttacgtccttgccccacatcaatgttttgctattta 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  8146891 ggaaacatgcactgcgcatcaaatcttgattttaagataagattgtgactctagattccttaccttacgtccttgccccacaccaatgttttgctattta 8146990  T
Q  222 gaggtaaacttatac--acactatcatcattttttaccttaattaattaacgcaaacttaattaagcggctttagaatcataattataa 308  Q
    |||||||||||||||  ||||||||| |||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  8146991 gaggtaaacttatacatacactatcaccattctttaccttaattaattaacgcaaacttaattaagtggatttagaatcataattataa 8147079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 313 - 436
Target Start/End: Original strand, 22661362 - 22661485
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| || ||||||||||||||||    
T  22661362 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccttgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 22661461  T
Q  413 gttcgtccctcttccagaataatc 436  Q
    ||||||||||||||| | ||||||    
T  22661462 gttcgtccctcttcccggataatc 22661485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 27480844 - 27480719
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| || ||||||||||||||    
T  27480844 ttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccttgattttactaatccttccattttgcccctgtaattactaatcatttga 27480745  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  27480744 aagttcgtccctcttcctggataatc 27480719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 27479990 - 27480106
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| || |||||||||||| |||||||||||||||||| |||||||||||| | |||||||||||| || ||||||||||||||    
T  27479990 ttaaatatgcttttcatccctgcaattataggccgcttgatttttcatccctgagcttactaatcctcctattttgcccctgtaattactaatcatttga 27480089  T
Q  411 aagttcgtccctcttcc 427  Q
    |||||||||||||||||    
T  27480090 aagttcgtccctcttcc 27480106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 311 - 420
Target Start/End: Original strand, 37284112 - 37284221
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||| |    
T  37284112 ttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgcaattactaatcatttta 37284211  T
Q  411 aagttcgtcc 420  Q
    || |||||||    
T  37284212 aaattcgtcc 37284221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 311 - 420
Target Start/End: Complemental strand, 37289407 - 37289298
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||| |    
T  37289407 ttaaatatgcttttcatccctgtaattataggccatttggtttttcatccctgagcttactaatcctcccattttgcccctgcaattactaatcatttta 37289308  T
Q  411 aagttcgtcc 420  Q
    || |||||||    
T  37289307 aaattcgtcc 37289298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 12930775 - 12930874
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| || ||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||    
T  12930775 ttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcatttga 12930874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 12643103 - 12643228
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| |||||||||||||| |||||||||||||| |||| |||||||||||| ||||||| |||||||||  | ||| ||||| |    
T  12643103 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaatcctcccattttacccctgcaaaaattaaccatttaa 12643202  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    || |||||||||||||| || |||||    
T  12643203 aatttcgtccctcttcccgattaatc 12643228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 4226128 - 4226244
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| |||||||||||||| ||||||| |||| || ||| ||||||||||||||||||||||||||| ||  | ||||||||| |    
T  4226128 ttaaatatgcatttcatccctgtaattataggccatttgattcttcaaccatgagcttactaatccttccattttgcccctgtaaaaattaatcatttaa 4226227  T
Q  411 aagttcgtccctcttcc 427  Q
    || ||||||| ||||||    
T  4226228 aatttcgtccttcttcc 4226244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 7158234 - 7158333
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| |  ||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| || || |||||||||||    
T  7158234 ttaaatatgcatttcatccctacaattataggccatttgatttttcatccatgaacttactaatccttccattttgcccctgtaaatattaatcatttga 7158333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 12929290 - 12929389
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| || || |||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||||||||    
T  12929290 ttaaatatgcatttcatccctgcaaatataggctatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 12929389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 4227269 - 4227155
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||||| ||| |||||||||||| |||||||| ||||| ||  | ||| ||||| |    
T  4227269 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccttgagcttactaatcctcccattttgtccctgtaaaaattaaccatttaa 4227170  T
Q  411 aagttcgtccctctt 425  Q
    || ||||||||||||    
T  4227169 aatttcgtccctctt 4227155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 306 - 427
Target Start/End: Complemental strand, 12644235 - 12644114
Alignment:
Q  306 taaggttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatca 405  Q
    |||| |||||||||| |||||||| | |||||| ||||| ||||||||||||||||||| |||||||||||| ||||||| | |||| ||  | ||||||    
T  12644235 taagcttaaatatgcatttcatccctataattacaggccatttgatttttcatccctgagcttactaatcctcccattttactcctgtaaaaattaatca 12644136  T
Q  406 tttgaaagttcgtccctcttcc 427  Q
    ||| ||| ||||||||||||||    
T  12644135 tttaaaatttcgtccctcttcc 12644114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 38643553 - 38643666
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| || ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||| ||  | ||||||||| |    
T  38643553 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccttgaccttactaatcctcccattttgctcctgtaaaaattaatcatttaa 38643652  T
Q  411 aagttcgtccctct 424  Q
     | |||||||||||    
T  38643653 gatttcgtccctct 38643666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 45915905 - 45915791
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||||||| | |||||||||||| | ||||| |||||| ||  | ||||||||| |    
T  45915905 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctaagcttactaatcctcctattttacccctgtaaaaattaatcatttaa 45915806  T
Q  411 aagttcgtccctctt 425  Q
    || | ||||||||||    
T  45915805 aattccgtccctctt 45915791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 47558033 - 47558158
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||  | |||||||||||  |||||||||||||||||||  ||||||||||| |||||||||||||| ||  | ||| ||||| |    
T  47558033 ttaaatatgcatttcatctctttaattataggctatttgatttttcatccctgagtttactaatcctcccattttgcccctgtaaaaattaaccatttaa 47558132  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    || |||||||||||||| || |||||    
T  47558133 aatttcgtccctcttcccgattaatc 47558158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 43937897 - 43937996
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||||||||| |||||| | ||||| |||||||||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  43937897 ttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 43937996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 45914529 - 45914652
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||||||||| | ||||||||||  || ||||||||| || ||  | ||||||||| |    
T  45914529 ttaaatatgcatttcatctctgtaattataggccatttgatttttcatccctaagcttactaatctctc-attttgccc-tgtaaaaattaatcatttaa 45914626  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    || |||||||||||||| || |||||    
T  45914627 aatttcgtccctcttcccgattaatc 45914652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 37563735 - 37563636
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| ||||| |||||||| ||||| ||||| |||||||  ||||||||||||||| ||||||||||||| || ||||| |||||    
T  37563735 ttaaatatgtctttcgtccctgtaaatataggccatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcttttga 37563636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 386
Target Start/End: Complemental strand, 38644757 - 38644682
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttg 386  Q
    |||||||||| |||||| |||| ||||||||| | |||||||||| |||||| | |||| ||||||||||||||||    
T  38644757 ttaaatatgcatttcattcttgcaattataggtcatttgattttttatccctaagcttattaatccttccattttg 38644682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 43938275 - 43938176
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| |||||| || |||| ||| ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  43938275 ttaaatatgtctttcgtccttgcaaatataagccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 43938176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 408
Target Start/End: Complemental strand, 26830096 - 26830025
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcattt 408  Q
    |||||||||||| | ||||||| | |||  |||||||||||||||||||||| |||||| || |||||||||    
T  26830096 tataggccgttttaattttcattcatgaagttactaatccttccattttgccactgcaaatattaatcattt 26830025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 31695709 - 31695610
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||||| |||||||| || || |||||| | |||||  |||||||||| | ||||||||||||||||||||  |||||||| |  |||||| ||||||    
T  31695709 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccctgcaattgttaatcacttgaaa 31695610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 420
Target Start/End: Complemental strand, 40022584 - 40022517
Alignment:
Q  353 tttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaagttcgtcc 420  Q
    |||||||||||| ||||||||||||||||||||| | |||||| || ||| ||||||| | |||||||    
T  40022584 tttcatccctgatcttactaatccttccattttgtcactgcaaatattaagcatttgagaattcgtcc 40022517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 37563383 - 37563456
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||| ||||| |||||||  ||||||||||||| | | ||||||||||| || |||||||||||    
T  37563383 tataggccatttgaattttcgtccctgaatttactaatccttctaatctgcccctgcaaatattaatcatttga 37563456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 26825633 - 26825732
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| ||||| |||||| | ||||| ||||| |||||||  ||||||||| ||||| | |||||||||||  | |||||||||||    
T  26825633 ttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaagattaatcatttga 26825732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 408
Target Start/End: Original strand, 26828504 - 26828575
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcattt 408  Q
    |||||| ||||||| ||||||||||| |   |||||||||||||||||| || |||||| || |||||||||    
T  26828504 tataggtcgtttgaattttcatccctaaaagtactaatccttccattttaccactgcaaatattaatcattt 26828575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 12931084 - 12931020
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| ||||| |||||||  ||||||||||||||| | ||||| ||||| || |||||||||||    
T  12931084 tttgaattttcgtccctgaagttactaatccttccaatctgcccatgcaaatattaatcatttga 12931020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 106; Significance: 7e-53; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 48189196 - 48189071
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  48189196 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgagcttactaatccttccattttgcccctgtaattactaatcatttga 48189097  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  48189096 aagttcgtccctcttcccggataatc 48189071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 2944763 - 2944638
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || ||||||||||||||    
T  2944763 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccatccattttgcccctgtaattactaatcatttga 2944664  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| ||||||||    
T  2944663 aagttcgtccctcttcccgaataatc 2944638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 45279381 - 45279256
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  45279381 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 45279282  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  45279281 aagttcgtccctcttcccggataatc 45279256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 311 - 426
Target Start/End: Complemental strand, 11026729 - 11026614
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || ||||||||||||||    
T  11026729 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttaccaatccttccattttgcccctgtaattactaatcatttga 11026630  T
Q  411 aagttcgtccctcttc 426  Q
    ||||||||||||||||    
T  11026629 aagttcgtccctcttc 11026614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 313 - 436
Target Start/End: Original strand, 45278549 - 45278672
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| || ||||||||||||||||    
T  45278549 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaatttactaatccttccattttgcccctgtaattactaatcatttgaaa 45278648  T
Q  413 gttcgtccctcttccagaataatc 436  Q
    ||||||||||||||| | ||||||    
T  45278649 gttcgtccctcttcccggataatc 45278672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 313 - 436
Target Start/End: Original strand, 48188383 - 48188506
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||    
T  48188383 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 48188482  T
Q  413 gttcgtccctcttccagaataatc 436  Q
    ||||||||||||||| | ||||||    
T  48188483 gttcgtccctcttcccggataatc 48188506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 1756553 - 1756678
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  1756553 ttaaatatatttttcatccttgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttga 1756652  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  1756653 aagttcgtccctcttcccggataatc 1756678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 1757401 - 1757287
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  1757401 ttaaatatgattttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttga 1757302  T
Q  411 aagttcgtccctctt 425  Q
    ||||| |||||||||    
T  1757301 aagtttgtccctctt 1757287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 43105236 - 43105361
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || |||||||| |||||    
T  43105236 ttaaatatgttttacatccttgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcttttga 43105335  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||| ||||||| | ||||||    
T  43105336 aagttcgtctctcttcccggataatc 43105361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 321 - 426
Target Start/End: Complemental strand, 43105921 - 43105816
Alignment:
Q  321 ttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaagttcgtcc 420  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  43105921 ttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttgaaagttcgtcc 43105822  T
Q  421 ctcttc 426  Q
    ||||||    
T  43105821 ctcttc 43105816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 313 - 424
Target Start/End: Original strand, 37249204 - 37249315
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||| || ||||||||||||||||    
T  37249204 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttattaatcctcccattttgcccctgtaattactaatcatttgaaa 37249303  T
Q  413 gttcgtccctct 424  Q
    ||||||||||||    
T  37249304 gttcgtccctct 37249315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 313 - 436
Target Start/End: Complemental strand, 37249892 - 37249770
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| || || ||||||||||||||||    
T  37249892 aaatatgcttttcatcct-gcaattataggccgtttgatttttcatccctgagcttactaatcctcccattctgcccttgtaattactaatcatttgaaa 37249794  T
Q  413 gttcgtccctcttccagaataatc 436  Q
    ||||||||||||||| | ||||||    
T  37249793 gttcgtccctcttcccggataatc 37249770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 311 - 420
Target Start/End: Complemental strand, 22736787 - 22736678
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| |||||||||||||| || ||||||||||||||    
T  22736787 ttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttga 22736688  T
Q  411 aagttcgtcc 420  Q
    || |||||||    
T  22736687 aaattcgtcc 22736678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 331 - 427
Target Start/End: Original strand, 11025960 - 11026056
Alignment:
Q  331 tgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaagttcgtccctcttcc 427  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||  || |||||||||||||||||||||||||||||||    
T  11025960 tgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcctctataattactaatcatttgaaagttcgtccctcttcc 11026056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 420
Target Start/End: Complemental strand, 44482048 - 44481941
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||||| ||| |||||||||||| |||||||||||||| || ||||||||||||||||    
T  44482048 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 44481949  T
Q  413 gttcgtcc 420  Q
     |||||||    
T  44481948 attcgtcc 44481941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 32717202 - 32717086
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| |||||||||||| | ||||||||||||||||| | ||||||||||||||||||||||||||| ||  | ||||||||| |    
T  32717202 ttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctaaacttactaatccttccattttgcccctgtaaaaattaatcatttaa 32717103  T
Q  411 aagttcgtccctcttcc 427  Q
    || ||||||||||||||    
T  32717102 aatttcgtccctcttcc 32717086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 436
Target Start/End: Original strand, 29192040 - 29192163
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||||| |||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||||||| ||  | ||||||||| |||    
T  29192040 aaatatgcatttcatccctgtaattataggccatttgatttttcattcctgagcttactaatccttccgttttgcccctgtaaaaattaatcatttaaaa 29192139  T
Q  413 gttcgtccctcttccagaataatc 436  Q
     |||||||||||||| || |||||    
T  29192140 tttcgtccctcttcccgattaatc 29192163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 420
Target Start/End: Original strand, 44476054 - 44476161
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||| ||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||| |||||||||||| | || ||||||||||||||||    
T  44476054 aaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgaacttactaatcctcccattttgcccccgtaattactaatcatttgaaa 44476153  T
Q  413 gttcgtcc 420  Q
     |||||||    
T  44476154 attcgtcc 44476161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 2943916 - 2944032
Alignment:
Q  311 ttaaatatgcttttc-atccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttg 409  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||||||| ||| |||||||||||| | |||||||||||| ||    ||||||||||    
T  2943916 ttaaatatgcttttctatccctgcaattataggccgtttgatttttcatcc-tgagcttactaatcctcctattttgcccctgtaaaagttaatcatttg 2944014  T
Q  410 aaagttcgtccctcttcc 427  Q
    ||||||||||||||||||    
T  2944015 aaagttcgtccctcttcc 2944032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 29193090 - 29192965
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||||| ||||||| ||  | |||| |||| |    
T  29193090 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttcgcccctgtaaaaattaattatttaa 29192991  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    || || ||||||||||| || |||||    
T  29192990 aattttgtccctcttcccgattaatc 29192965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 22735403 - 22735471
Alignment:
Q  352 ttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaagttcgtcc 420  Q
    ||||||||||| | |||||||||||| |||||||||||||| || |||||||||||||||| |||||||    
T  22735403 ttttcatccctaagcttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcc 22735471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 22129020 - 22129108
Alignment:
Q  322 tttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||  |||| |||||||  ||||| ||||| || ||||  ||||||||||||||| ||||||||||||| || |||||||||||    
T  22129020 tttcatccccgtaaatataggctatttgaattttcgtcactgaagttactaatccttccaatttgcccctgcaaatattaatcatttga 22129108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 10998254 - 10998155
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||||| ||  || || |||||| | ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  10998254 ttaaatatgtttttcgtctctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 10998155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 53037041 - 53037129
Alignment:
Q  322 tttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||| |||||| | ||||| ||||| |||||||  ||||||||||||||| | | ||||||||| || || ||||||||    
T  53037041 tttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatacccctgcaaatattagtcatttga 53037129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 1741390 - 1741489
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||| | ||||| ||||| |||||||  ||||||||||||||| | ||||| ||||| || |||||||||||    
T  1741390 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatattaatcatttga 1741489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 408
Target Start/End: Original strand, 55036698 - 55036769
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcattt 408  Q
    |||||| | ||||| ||||||| |||||  ||||||||||||||| | ||||||||||| || |||||||||    
T  55036698 tataggtcatttgaattttcattcctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 55036769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 408
Target Start/End: Complemental strand, 46670616 - 46670539
Alignment:
Q  331 tgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcattt 408  Q
    ||||| |||||| | ||||| |||||||||||||  |||||||| ||||||||||| |  ||||| || |||||||||    
T  46670616 tgtaaatataggtcatttgaattttcatccctgaagttactaattcttccattttgtcattgcaaatattaatcattt 46670539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 40256912 - 40256976
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| ||||| |||||||  ||||||||||||||| | ||||| ||||| || |||||||||||    
T  40256912 tttgaattttcgtccctgaagttactaatccttccaatatgcccttgcaaatattaatcatttga 40256976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 34665773 - 34665898
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  34665773 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 34665872  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  34665873 aagttcgtccctcttcccggataatc 34665898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 34214626 - 34214500
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttca-tccctgaccttactaatccttccattttgcccctgcaagtactaatcatttg 409  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||||||||||    
T  34214626 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcaatccctgaacttactaatccttccattttgcccctgtaattactaatcatttg 34214527  T
Q  410 aaagttcgtccctcttccagaataatc 436  Q
    |||||||||||||||||| ||||||||    
T  34214526 aaagttcgtccctcttcccgaataatc 34214500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 313 - 436
Target Start/End: Complemental strand, 34666635 - 34666513
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||||    
T  34666635 aaatatgtttttcatcgctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttg-ccctgtaattactaatcatttgaaa 34666537  T
Q  413 gttcgtccctcttccagaataatc 436  Q
    ||||||||||||||| | ||||||    
T  34666536 gttcgtccctcttcccggataatc 34666513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 311 - 420
Target Start/End: Complemental strand, 33497713 - 33497604
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||| | ||||||||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||    
T  33497713 ttaaatatgcttttcatccctgtaattatagggcatttgatttttcatccatgagcttactaatcctcccattttgcccctgcaattactaatcatttga 33497614  T
Q  411 aagttcgtcc 420  Q
    || |||||||    
T  33497613 aaattcgtcc 33497604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 34213767 - 34213883
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||| ||    |||||||||||    
T  34213767 ttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatttga 34213866  T
Q  411 aagttcgtccctcttcc 427  Q
    |||||||||||||||||    
T  34213867 aagttcgtccctcttcc 34213883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 420
Target Start/End: Original strand, 38598967 - 38599076
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| || ||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||||||||| || |||||||||||    
T  38598967 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatttga 38599066  T
Q  411 aagttcgtcc 420  Q
    || |||||||    
T  38599067 aaattcgtcc 38599076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 312 - 420
Target Start/End: Original strand, 33497020 - 33497128
Alignment:
Q  312 taaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaa 411  Q
    |||||||| ||||||| | |||||||||||| | ||||||||||||| | ||| |||||||||||||||||||||||| ||||| |||||||||||||||    
T  33497020 taaatatgattttcattcatgtaattataggtcatttgatttttcattcttgaacttactaatccttccattttgcccttgcaattactaatcatttgaa 33497119  T
Q  412 agttcgtcc 420  Q
    | |||||||    
T  33497120 aattcgtcc 33497128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 301 - 420
Target Start/End: Original strand, 1231519 - 1231638
Alignment:
Q  301 aattataaggttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtact 400  Q
    |||| |||| |||||||||| |||||||| |  ||||||||||| ||||||||||||||| ||| |||||||||||| ||||||| |||||| ||  | |    
T  1231519 aattttaagcttaaatatgcatttcatccctacaattataggccctttgatttttcatccatgagcttactaatcctcccattttacccctgtaaaaatt 1231618  T
Q  401 aatcatttgaaagttcgtcc 420  Q
    |||||||||||| |||||||    
T  1231619 aatcatttgaaaattcgtcc 1231638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 25288173 - 25288074
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||  || ||||||||| | ||||||||||||||||||| ||||||||||||  |||||||||||||||| || |||||||||||    
T  25288173 ttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatttga 25288074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 27437616 - 27437515
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| || || |||||||||||||| ||||| |||||||  ||||||||| || ||||||||| |||||| ||||||||||||||    
T  27437616 ttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcatttga 27437517  T
Q  411 aa 412  Q
    ||    
T  27437516 aa 27437515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 322 - 412
Target Start/End: Complemental strand, 7393231 - 7393141
Alignment:
Q  322 tttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||||| || ||||||||| | ||||||||||||||||||| |||||||||||| |||||||  |||||||| || |||||||||||||    
T  7393231 tttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatttgaaa 7393141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 419
Target Start/End: Complemental strand, 1232894 - 1232788
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||||||||| |||    ||||| |||||||||||||| ||  | |||||||||||    
T  1232894 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagctt--gtatcctcccattttgcccctgtaaaaattaatcatttga 1232797  T
Q  411 aagttcgtc 419  Q
    || ||||||    
T  1232796 aaattcgtc 1232788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 27436566 - 27436667
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| || || |||||| ||||||| ||||| |||||||  ||||||||| || ||||||||| |||||| ||||||||||||||    
T  27436566 ttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcatttga 27436665  T
Q  411 aa 412  Q
    ||    
T  27436666 aa 27436667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 4970130 - 4970229
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||||| |||||||| || |||||  || | |||||  |||||||||||| |||||||||||||||||||||||||||||| || ||| |||||||||    
T  4970130 aaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatttgaaa 4970229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 420
Target Start/End: Original strand, 24377186 - 24377293
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||||| |||||| |||| |||||  || | |||||  |||||||||||| |||||||||||| ||||||| ||||||||| || ||| ||||| |||    
T  24377186 aaatatgcatttcattcttgcaattaggggtcatttgaagtttcatccctgaacttactaatcctcccatttttcccctgcaaatattaagcatttcaaa 24377285  T
Q  413 gttcgtcc 420  Q
     |||||||    
T  24377286 attcgtcc 24377293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 25287795 - 25287894
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| ||||| ||| |||| ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  25287795 ttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 25287894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 412
Target Start/End: Original strand, 7392250 - 7392312
Alignment:
Q  350 atttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||||||||||| |||||||||||| |||||||  |||||||| || |||||||||||||    
T  7392250 atttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatttgaaa 7392312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 410
Target Start/End: Original strand, 36623346 - 36623454
Alignment:
Q  303 ttataagg-ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtacta 401  Q
    |||||||| ||||||||| ||||| ||| || || |||||||| ||||| ||||| |||||||  |||||||||||| || | ||| ||||||| || ||    
T  36623346 ttataaggcttaaatatgtttttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgctcctgcaaatatta 36623445  T
Q  402 atcatttga 410  Q
    |||||||||    
T  36623446 atcatttga 36623454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 29574747 - 29574846
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||||| |||||||| || || |||||| | |||||  |||||||||| | ||||||||||||||||||||  |||||||| |  |||||| ||||||    
T  29574747 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccctgcaattgttaatcacttgaaa 29574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 36623734 - 36623635
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||||| ||||| ||||| |||||||  |||||||| |||||| | ||||||||||| || |||||||||||    
T  36623734 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttga 36623635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 41801819 - 41801918
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||||| ||| || || |||||| | ||||| ||||| | |||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  41801819 ttaaatatgtttttcgtccctgcaaatataggtcatttgaattttcgttcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 41801918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 43866714 - 43866813
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||||| ||||| ||||| |||||||  |||||||| |||||| | ||||||||||| || |||||||||||    
T  43866714 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttga 43866813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 4463523 - 4463457
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatcct 377  Q
    |||||||||| |||||||| || || |||||||| |||||  |||||||||||| ||||||||||||    
T  4463523 ttaaatatgcatttcatccctgcaagtataggccatttgaaatttcatccctgaacttactaatcct 4463457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 7748 - 7675
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||| ||||| ||| |||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  7748 tataggccatttgaattttcgtccatgaagttactaatccttccaatatgcccctgcaaatattaatcatttga 7675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 412
Target Start/End: Original strand, 9632347 - 9632432
Alignment:
Q  327 tccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||| || |||||| | ||||| ||||| |||||||  |||||||||||||||||||| |  ||||| || |||||||||||||    
T  9632347 tccttgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatttgaaa 9632432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 23424867 - 23424794
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||| ||||| |||||||  ||||||||| ||||| | ||||||||||| || |||||||||||    
T  23424867 tataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaatattaatcatttga 23424794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 315 - 420
Target Start/End: Complemental strand, 24379089 - 24378984
Alignment:
Q  315 atatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaagt 414  Q
    |||||| |||||||| || |||||  || | |||||| |||||||| ||| |||||||||||| | ||||||||||||||| ||  || ||||| ||| |    
T  24379089 atatgcatttcatccctgcaattaggggtcatttgatatttcatccttgaacttactaatcctcctattttgcccctgcaaataaaaagcattttaaaat 24378990  T
Q  415 tcgtcc 420  Q
    ||||||    
T  24378989 tcgtcc 24378984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 11478506 - 11478427
Alignment:
Q  331 tgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| ||||| || |||||  |||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  11478506 tgtaaatatagaccatttgaactttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 11478427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 27857123 - 27857024
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||||| ||||| ||||| |||||||  ||||||||| ||||| | ||||| ||||| || |||||||||||    
T  27857123 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccttgcaaatattaatcatttga 27857024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 43867092 - 43866993
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||||| ||| || || ||||| || ||||| ||||| ||| |||  |||||||||||| || | ||||||||||| || |||||||||||    
T  43867092 ttaaatatgtttttcgtccctgcaaatatagaccatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatcatttga 43866993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 412
Target Start/End: Complemental strand, 40422530 - 40422440
Alignment:
Q  322 tttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||||| || || |||||| | ||||| ||||| |||||||  ||||||||||||| | | |||| |||||| || |||||||||||||    
T  40422530 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttcaaatctgccactgcaaatattaatcatttgaaa 40422440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 547434 - 547530
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcattt 408  Q
    ||||||||||||| | ||| || || |||||||| ||| | ||||  |||||||  ||||||||||||||| | ||||||||||| || |||||||||    
T  547434 ttaaatatgcttt-cgtccctgcaaatataggccatttaaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 547530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 29190514 - 29190441
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| || ||||| |||| ||| ||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  29190514 tatagaccatttgaatttttatctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 29190441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 37343137 - 37343064
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||| | ||||| ||||| |||||||  |||||||| |||||| | ||||||||||| || |||||||||||    
T  37343137 tataggtcatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttga 37343064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 410
Target Start/End: Original strand, 20096070 - 20096122
Alignment:
Q  358 tccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||  ||||||||||||||| |||||| |||||| || |||||||||||    
T  20096070 tccctgaagttactaatccttccaatttgcctctgcaaatattaatcatttga 20096122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 40525545 - 40525609
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| ||||| |||||||  ||||||||||||||| | |||| |||||| || |||||||||||    
T  40525545 tttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttga 40525609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 40525853 - 40525789
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| ||||| |||||||  ||||||||| ||||| | ||||||||||| || |||||||||||    
T  40525853 tttgaattttcgtccctgaaattactaatcattccaatctgcccctgcaaatattaatcatttga 40525789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 2e-50; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 33399969 - 33400094
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  33399969 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 33400068  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  33400069 aagttcgtccctcttcccggataatc 33400094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 14657306 - 14657181
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  14657306 ttaaatatgcttttcatccctataattataggccgtttgattttttatccctgaccttactaatccttccattttgcccctgtaattactaatcatttga 14657207  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  14657206 aagttcgtccctcttcccggataatc 14657181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 1661527 - 1661402
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||    
T  1661527 ttaaatatgattttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttacccctgtaattactaatcatttga 1661428  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  1661427 aagttcgtccctcttcccggataatc 1661402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 303 - 426
Target Start/End: Complemental strand, 4117653 - 4117529
Alignment:
Q  303 ttataagg-ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtacta 401  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||    ||    
T  4117653 ttataaggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagtta 4117554  T
Q  402 atcatttgaaagttcgtccctcttc 426  Q
    ||||||||||| |||||||||||||    
T  4117553 atcatttgaaaattcgtccctcttc 4117529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 311 - 426
Target Start/End: Original strand, 4116802 - 4116917
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||    |||||||||||    
T  4116802 ttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatttga 4116901  T
Q  411 aagttcgtccctcttc 426  Q
    || |||||||||||||    
T  4116902 aaattcgtccctcttc 4116917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 14656483 - 14656599
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||||||||| |||||||||||| | |||||||||||| ||    |||||||||||    
T  14656483 ttaaatatgcttttcatccctgcaattataggctgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatttga 14656582  T
Q  411 aagttcgtccctcttcc 427  Q
    |||||||||||||||||    
T  14656583 aagttcgtccctcttcc 14656599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 33401223 - 33401107
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||    |||||||||||    
T  33401223 ttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgaacttactaatcctcccattttgcccctgtaaaagttaatcatttga 33401124  T
Q  411 aagttcgtccctcttcc 427  Q
    |  ||||| ||||||||    
T  33401123 atattcgtacctcttcc 33401107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 420
Target Start/End: Complemental strand, 17784482 - 17784373
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| || ||| ||||||| ||||||||||||||| ||| |||||||||||| ||||||||||||||||| || ||||||||| |    
T  17784482 ttaaatatgcttttcatccctgcaatgataggccatttgatttttcatccatgaacttactaatcctcccattttgcccctgcaaatattaatcatttta 17784383  T
Q  411 aagttcgtcc 420  Q
    || |||||||    
T  17784382 aaattcgtcc 17784373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 395
Target Start/End: Complemental strand, 8427459 - 8427378
Alignment:
Q  314 aatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaa 395  Q
    ||||||| |||||||| || ||||||||| | ||||||||||||||||||  |||||||||||| |||||||||||||||||    
T  8427459 aatatgcatttcatccctgcaattataggtcatttgatttttcatccctggacttactaatcctcccattttgcccctgcaa 8427378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 23291773 - 23291846
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||| |||||||||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  23291773 tataggccatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 23291846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 13480211 - 13480310
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||||| ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  13480211 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 13480310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 13480589 - 13480490
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||||||||| |||||| | ||||| ||||| |||||||  ||||||||||||||| | ||||||| ||| || |||||||||||    
T  13480589 ttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctacaaatattaatcatttga 13480490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 30234973 - 30234874
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || ||||||  |||||| |||||||||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  30234973 ttaaatatgtctttcgtccctgcaaatataggttgtttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 30234874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 5064690 - 5064617
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  5064690 tataggccatttgaattttcgtccctgaggttactaatccttccaatctgcccctgcaaatattaatcatttga 5064617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 411
Target Start/End: Original strand, 8427203 - 8427303
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  ||||||||||| || |||||| | ||||| ||||| || || |  ||||||||||| ||||||||||||||||| || |||||| ||||    
T  8427203 ttaaatatgtctttcatccttgcaaatataggtcatttgaattttcgtctctcaagttactaatcctcccattttgcccctgcaaatattaatcagttga 8427302  T
Q  411 a 411  Q
    |    
T  8427303 a 8427303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 20995037 - 20994973
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| |||||||||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  20995037 tttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 20994973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 5064338 - 5064437
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| ||||| |||| | | ||||| ||||| |||||||  ||||||||||| ||| ||||||||||||| || |||||||||||    
T  5064338 ttaaatatgtctttcgtccctgtaaatataagtcatttgaattttcgtccctgaagttactaatcctcccaatttgcccctgcaaatattaatcatttga 5064437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 32337593 - 32337666
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| || ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  32337593 tatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttga 32337666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 738078 - 737979
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||| | ||||| ||||| ||| |||  ||||||||||||||| | ||||||| |||||| |||||||||||    
T  738078 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccccttcaagtattaatcatttga 737979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 15819871 - 15819772
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||| | ||||| ||||| |||||||  ||||||||||||||| | | ||| ||||| ||||||||||||||    
T  15819871 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctacccttgcaaatactaatcatttga 15819772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 1066519 - 1066419
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||| | |||||||| |||||| |||||  | ||||| ||||| |||||||  ||||||||  ||||||||||||  ||||| || |||||||||||    
T  1066519 ttaaataggtttttcatc-ttgtaaatatagatcatttgaattttcgtccctgaagttactaatatttccattttgccattgcaaatattaatcatttga 1066421  T
Q  411 aa 412  Q
    ||    
T  1066420 aa 1066419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 32337922 - 32337849
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||| | ||||| ||||| |||||||  ||||| ||||||||| | ||||||||||| || |||||||||||    
T  32337922 tataggtcatttgaattttcgtccctgaagttactgatccttccaatatgcccctgcaaatattaatcatttga 32337849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 2e-50; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 38814424 - 38814299
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  38814424 ttaaatatgcttttcatccttgtaattttaggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 38814325  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  38814324 aagttcgtccctcttcccggataatc 38814299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 38813557 - 38813682
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||| ||||||    
T  38813557 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaataatttga 38813656  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  38813657 aagttcgtccctcttcccggataatc 38813682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 56556585 - 56556710
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  56556585 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttga 56556684  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  56556685 aagttcgtccctcttcccggataatc 56556710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 306 - 436
Target Start/End: Complemental strand, 56557427 - 56557297
Alignment:
Q  306 taaggttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatca 405  Q
    |||| ||||||||||||||||||| | |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| || |||||||||    
T  56557427 taagcttaaatatgcttttcatccctctaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatca 56557328  T
Q  406 tttgaaagttcgtccctcttccagaataatc 436  Q
    |||||||||||||||||||||| | ||||||    
T  56557327 tttgaaagttcgtccctcttcccggataatc 56557297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 52816520 - 52816395
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  52816520 ttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatccttccattttgcccctgtaattactaatcatttga 52816421  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  52816420 aagttcgtccctcttcccggataatc 52816395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 52815666 - 52815791
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||| || ||||||||| ||||    
T  52815666 ttaaatatgcttttcatccctgtaattataggccgtttgattttttatccctgaacttactaatcctttcattttgcccctgtaattactaatcacttga 52815765  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  52815766 aagttcgtccctcttcccggataatc 52815791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 313 - 424
Target Start/End: Complemental strand, 38982691 - 38982580
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || ||||||||||||||||    
T  38982691 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 38982592  T
Q  413 gttcgtccctct 424  Q
    ||||||||||||    
T  38982591 gttcgtccctct 38982580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 420
Target Start/End: Complemental strand, 55013185 - 55013077
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||| ||||| |||||||||||| ||| |||||||||| || ||||||||||||||    
T  55013185 ttaaatatgcttttcatccatgtaattataggctatttgatttttcat-cctgagcttactaatcctcccagtttgcccctgtaattactaatcatttga 55013087  T
Q  411 aagttcgtcc 420  Q
    || |||||||    
T  55013086 aaattcgtcc 55013077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 23455786 - 23455661
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| |||||||||||| | ||||||||||||| ||||| |||||||||||| |||||||||| ||| ||  | ||||||||| |    
T  23455786 ttaaatatgcatttcatccctgtaattataggtcatttgatttttcattcctgagcttactaatcctcccattttgccactgtaaaaattaatcatttca 23455687  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    || |||||||||||||| || |||||    
T  23455686 aatttcgtccctcttcccgattaatc 23455661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 392
Target Start/End: Original strand, 23454957 - 23455038
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctg 392  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||||||||    
T  23454957 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcatcccattttgcccctg 23455038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 53477177 - 53477076
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||  || ||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||||||||| || |||||||||||    
T  53477177 ttaaatatgcatttcatctctgcaattataggtcatttgatttttcatctctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 53477078  T
Q  411 aa 412  Q
    ||    
T  53477077 aa 53477076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 420
Target Start/End: Original strand, 54590146 - 54590255
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| || ||||||||| | ||||||||||||||  ||| ||||||||| ||||||||||||| || ||| || |||||||||||    
T  54590146 ttaaatatgcatttcatccctgcaattataggtcatttgatttttcatctttgaacttactaattcttccattttgcctctacaaatattaatcatttga 54590245  T
Q  411 aagttcgtcc 420  Q
    |  |||||||    
T  54590246 attttcgtcc 54590255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 311 - 395
Target Start/End: Complemental strand, 54591675 - 54591591
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaa 395  Q
    |||||||||| |||||||| || ||||||||  | ||||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  54591675 ttaaatatgcatttcatccctgcaattatagatcatttgatttttcatccctgaacttactaaacctcccattttgcccctgcaa 54591591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 412
Target Start/End: Complemental strand, 489539 - 489464
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||||||||||  ||||| |||| ||  ||||||||||||||||||||||  ||||| || |||||||||||||    
T  489539 tataggccgtttggattttcgtcccagaagttactaatccttccattttgccattgcaaatattaatcatttgaaa 489464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 412
Target Start/End: Complemental strand, 515331 - 515256
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||||||||||  ||||| |||| ||  ||||||||||||||||||||||  ||||| || |||||||||||||    
T  515331 tataggccgtttggattttcgtcccagaagttactaatccttccattttgccattgcaaatattaatcatttgaaa 515256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 22250114 - 22250015
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||||| ||||| ||||| |||||||  |||||||| |||||| | ||||||||||| || |||||||||||    
T  22250114 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttga 22250015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 410
Target Start/End: Complemental strand, 33294536 - 33294425
Alignment:
Q  299 ataattataaggttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagta 398  Q
    ||||||||| | |||||||||  |||| ||| || || |||||||  ||||| ||||| |||||||  ||||||||||||||  | ||||||||||| ||    
T  33294536 ataattataggcttaaatatgtctttcctccctgcaaatataggcaatttgaattttcgtccctgaagttactaatccttccgatctgcccctgcaaata 33294437  T
Q  399 ctaatcatttga 410  Q
     |||||||||||    
T  33294436 ttaatcatttga 33294425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 47862513 - 47862434
Alignment:
Q  331 tgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| |||||||| ||||| ||||| ||| |||  ||||||||||||| | ||||||||||||| || |||||||||||    
T  47862513 tgtaaatataggccatttgaattttcgtccatgaagttactaatccttctaatttgcccctgcaaatattaatcatttga 47862434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 53559768 - 53559669
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||||| ||||| ||||| |||||||  ||||||||| ||||| | ||||||||||| || |||||||||||    
T  53559768 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcgttccaatctgcccctgcaaatattaatcatttga 53559669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 13336935 - 13336834
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| || || |||||| | |||||  |||||||||||| |||||||||||| ||||| |  |||||||| |  |||||| ||||    
T  13336935 ttaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttactaatcctcccattctttccctgcaattgttaatcacttga 13336836  T
Q  411 aa 412  Q
    ||    
T  13336835 aa 13336834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 20086466 - 20086539
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||| | ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  20086466 tataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 20086539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 54961460 - 54961533
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| || ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  54961460 tatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttga 54961533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 34238484 - 34238572
Alignment:
Q  322 tttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||| ||||||||| |||||||  ||||| ||||| || ||||  |||||||||||| || | ||||||||||| || |||||||||||    
T  34238484 tttcgtccttgtaaatataggctatttgaattttcgtctctgaagttactaatcctttcaatatgcccctgcaaatattaatcatttga 34238572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 47862190 - 47862254
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| ||||| || ||||  ||||||||||||||| | ||||||||||| ||||||||||||||    
T  47862190 tttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatactaatcatttga 47862254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 412
Target Start/End: Original strand, 32846391 - 32846466
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||||| ||||| ||||| | |||||  ||| ||||||||||||||||||  ||||| || |||||||||||||    
T  32846391 tataggccatttgaattttcgttcctgaagttattaatccttccattttgccattgcaaatattaatcatttgaaa 32846466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 53475834 - 53475933
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  ||||||| ||| || ||||| || ||||| ||||||||||| |  |||||||||||| ||  |||||| ||||| || |||||||||||    
T  53475834 ttaaatatgtctttcatctttgcaaatatagaccatttgagttttcatccctaaagttactaatcctttcaaattgcccttgcaaatattaatcatttga 53475933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 12691435 - 12691508
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||| ||||| |||||||  ||||||||||||||| | || |||| ||| || |||||||||||    
T  12691435 tataggccatttgaattttcgtccctgaagttactaatccttccaatctgtccctacaaatattaatcatttga 12691508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 309 - 410
Target Start/End: Complemental strand, 12691788 - 12691687
Alignment:
Q  309 ggttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcattt 408  Q
    |||||||||||  |||| ||| || || |||||| | ||||| ||||  |||||||  ||||||||||||||| |  |||||||||| || |||||||||    
T  12691788 ggttaaatatgtctttcgtccctgcaaatataggtcatttgaatttttgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcattt 12691689  T
Q  409 ga 410  Q
    ||    
T  12691688 ga 12691687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 408
Target Start/End: Original strand, 33294203 - 33294244
Alignment:
Q  367 ttactaatccttccattttgcccctgcaagtactaatcattt 408  Q
    ||||||||||||||| ||||||||||||| || |||||||||    
T  33294203 ttactaatccttccaatttgcccctgcaaatattaatcattt 33294244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 377
Target Start/End: Original strand, 9254411 - 9254475
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatcct 377  Q
    |||||||| |||||||| || || |||||||| |||||  |||||||| ||| ||||||||||||    
T  9254411 aaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttactaatcct 9254475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 412
Target Start/End: Complemental strand, 37678188 - 37678128
Alignment:
Q  352 ttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||| |||||||  ||||||||||||||| | |||| |||||| || |||||||||||||    
T  37678188 ttttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaaa 37678128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 47981982 - 47981918
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| ||||| || ||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  47981982 tttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 47981918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 50245871 - 50245959
Alignment:
Q  322 tttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||| ||| ||||| |||||| | ||||| ||||||||| |||  ||||||||| ||||| | |||| |||||| || |||||||||||    
T  50245871 tttcgtccctgtaaatataggtcatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcatttga 50245959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 7e-50; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 29957820 - 29957936
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  29957820 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 29957919  T
Q  411 aagttcgtccctcttcc 427  Q
    |||||||||||||||||    
T  29957920 aagttcgtccctcttcc 29957936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 20983358 - 20983233
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  20983358 ttaaatatgcttttcatccctgtaattatagaccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 20983259  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  20983258 aagttcgtccctcttcccggataatc 20983233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 311 - 426
Target Start/End: Original strand, 20982527 - 20982642
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  20982527 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 20982626  T
Q  411 aagttcgtccctcttc 426  Q
    |||||  |||||||||    
T  20982627 aagttaatccctcttc 20982642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 29958644 - 29958528
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||  || ||||||||||||||    
T  29958644 ttaaatatgtttttcatccctgtaattataggctgtttgatttttcatccctgaacttactaatccttccattttgcccctataattactaatcatttga 29958545  T
Q  411 aagttcgtccctcttcc 427  Q
    ||||||||| |||||||    
T  29958544 aagttcgtctctcttcc 29958528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 311 - 420
Target Start/End: Original strand, 20101773 - 20101882
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||||||||    
T  20101773 ttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgcaattaataatcatttga 20101872  T
Q  411 aagttcgtcc 420  Q
    || |||||||    
T  20101873 aaattcgtcc 20101882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 311 - 420
Target Start/End: Complemental strand, 20103241 - 20103132
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||||||| |||| |||||||||||||| || |||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||||||||||    
T  20103241 ttaaatatgctttttatccctgtaattataggccattagatttttcatccctgagcttactaatcctcccattttgcccatgcaattactaatcatttga 20103142  T
Q  411 aagttcgtcc 420  Q
    || |||||||    
T  20103141 aaattcgtcc 20103132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 25623291 - 25623404
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| | |||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||  | ||||||||| |    
T  25623291 ttaaatatgcatttcatccctataattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaa 25623390  T
Q  411 aagttcgtccctct 424  Q
    || |||||||||||    
T  25623391 aatttcgtccctct 25623404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 21103089 - 21103209
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||||||||||||     ||||||||||||||| |||||||||||||| ||||||||||||| |||||| || ||| || |||||||| || ||    
T  21103089 ttaaatatgcttttcatcc-----attataggccgtttggtttttcatccctgaacttactaatcctttcattttaccactgtaattactaatccttcga 21103183  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  21103184 aagttcgtccctcttcccggataatc 21103209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 424
Target Start/End: Complemental strand, 25624530 - 25624417
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| ||||||| |||||| ||  | ||||||||| |    
T  25624530 ttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttttcccctgtaaaaattaatcatttaa 25624431  T
Q  411 aagttcgtccctct 424  Q
    || |||||||||||    
T  25624430 aatttcgtccctct 25624417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 420
Target Start/End: Original strand, 24387354 - 24387463
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| || ||||||||||| ||| ||||||||||||||| |||||||||||| |||||||| || || ||  | |||||||||||    
T  24387354 ttaaatatgcatttcatccctgcaattataggccatttaatttttcatccctgagcttactaatcctcccattttgtccatgtaaaaattaatcatttga 24387453  T
Q  411 aagttcgtcc 420  Q
    || |||||||    
T  24387454 aaattcgtcc 24387463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 388
Target Start/End: Complemental strand, 24388353 - 24388276
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcc 388  Q
    |||||||||| |||||||| || ||||||| ||  ||||||||||||||||||| |||||||||||||||||||||||    
T  24388353 ttaaatatgcatttcatccctgcaattataagcaatttgatttttcatccctgagcttactaatccttccattttgcc 24388276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 411
Target Start/End: Complemental strand, 19620848 - 19620790
Alignment:
Q  353 tttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaa 411  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||    
T  19620848 tttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcatttgaa 19620790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 16366966 - 16367065
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| ||||| |||||| | ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  16366966 ttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 16367065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 311 - 408
Target Start/End: Original strand, 10446835 - 10446932
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcattt 408  Q
    |||||||||  |||| ||| || || |||||||| ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||    
T  10446835 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 10446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 16367318 - 16367245
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  16367318 tataggccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttga 16367245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 20911159 - 20911232
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||| | ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  20911159 tataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 20911232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 412
Target Start/End: Complemental strand, 9694097 - 9694022
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||| | ||||| ||||| |||||||  |||||||||||||||||||| |  ||||| || |||||||||||||    
T  9694097 tataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatttgaaa 9694022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 32519158 - 32519257
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||| | ||||| ||||| |||||||  ||||||||||||||| | ||| ||||||| || |||||||||||    
T  32519158 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaaattactaatccttccaatatgctcctgcaaatattaatcatttga 32519257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 412
Target Start/End: Original strand, 28599465 - 28599531
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||| ||||| ||| |||  ||||||||||||||||||||||  ||||| || |||||||||||||    
T  28599465 tttgaattttcgtccatgaagttactaatccttccattttgccattgcaaatattaatcatttgaaa 28599531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 1149966 - 1150039
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||| | ||||| ||||| |||||||  ||||||||||||||| |  |||||||||| || |||||||||||    
T  1149966 tataggtcatttgaattttcgtccctgaagttactaatccttccaatcggcccctgcaaatattaatcatttga 1150039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 1150292 - 1150219
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||| | ||||| ||||| |||||||  |||||||||||| || | ||||||||||| || |||||||||||    
T  1150292 tataggtcatttgaattttcgtccctgaaattactaatcctttcaatctgcccctgcaaatattaatcatttga 1150219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 410
Target Start/End: Original strand, 19619583 - 19619628
Alignment:
Q  365 ccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||| ||||||||||||||||| || |||| ||||||    
T  19619583 ccttactaatcctcccattttgcccctgcaaatattaattatttga 19619628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 17580366 - 17580430
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| ||||| |||| ||  ||| ||||||||||| ||||||||||||| || |||||||||||    
T  17580366 tttgaattttcgtccccgaagttattaatccttccaatttgcccctgcaaatattaatcatttga 17580430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 377
Target Start/End: Original strand, 43236509 - 43236573
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatcct 377  Q
    |||||||| ||| |||| || || |||||||| |||||  |||||||||||| ||||||||||||    
T  43236509 aaatatgcattttatccctgcaaatataggccatttgaaatttcatccctgaacttactaatcct 43236573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 3e-49; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 313 - 436
Target Start/End: Complemental strand, 46282888 - 46282765
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||    
T  46282888 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 46282789  T
Q  413 gttcgtccctcttccagaataatc 436  Q
    ||||||||||||||| | ||||||    
T  46282788 gttcgtccctcttcccggataatc 46282765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 313 - 436
Target Start/End: Complemental strand, 50063043 - 50062920
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| || ||||||||||||||||    
T  50063043 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcctctgtaattactaatcatttgaaa 50062944  T
Q  413 gttcgtccctcttccagaataatc 436  Q
    ||||||||||||||| | ||||||    
T  50062943 gttcgtccctcttcccggataatc 50062920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 46282074 - 46282199
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  46282074 ttaaatatgtttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 46282173  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  46282174 aagttcgtccctcttcccggataatc 46282199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 49093044 - 49093169
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || || ||||||||||||||    
T  49093044 ttaaacatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccatgtaattactaatcatttga 49093143  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  49093144 aagttcgtccctcttcccggataatc 49093169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 313 - 420
Target Start/End: Original strand, 32619389 - 32619496
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||| |||||||||||||| || ||||||||||||||||    
T  32619389 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 32619488  T
Q  413 gttcgtcc 420  Q
     |||||||    
T  32619489 attcgtcc 32619496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 343 - 436
Target Start/End: Complemental strand, 49093878 - 49093785
Alignment:
Q  343 ccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaagttcgtccctcttccagaataatc 436  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| | ||||||    
T  49093878 ccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtccctcttcccggataatc 49093785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 311 - 420
Target Start/End: Complemental strand, 51935296 - 51935187
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||| | | ||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||||||||||||||    
T  51935296 ttaaatatgcttttcatccatgtaattatatgtcatttgatttttcatccctgagctttctaatcctcccattttgcccctgcaattactaatcatttga 51935197  T
Q  411 aagttcgtcc 420  Q
    || |||||||    
T  51935196 aaattcgtcc 51935187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 313 - 419
Target Start/End: Complemental strand, 32622451 - 32622345
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||| ||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||| |||||||||||||| || ||||||| ||||||||    
T  32622451 aaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaataatttgaaa 32622352  T
Q  413 gttcgtc 419  Q
     ||||||    
T  32622351 attcgtc 32622345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 351 - 436
Target Start/End: Original strand, 50062246 - 50062331
Alignment:
Q  351 tttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaagttcgtccctcttccagaataatc 436  Q
    |||||||||||||| |||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||| | ||||||    
T  50062246 tttttcatccctgaacttactaatccttccattttgctcctgtaattactaatcatttgaaagttcgtccctcttcccggataatc 50062331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 424
Target Start/End: Complemental strand, 25066055 - 25065942
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| | |||||||| ||| ||||||||||||||||||| |||||||||||||||||||| |||||| ||  | ||||||||| |    
T  25066055 ttaaatatgcatttcatccctataattataagccatttgatttttcatccctgagcttactaatccttccattttacccctgtaaaaattaatcatttaa 25065956  T
Q  411 aagttcgtccctct 424  Q
     | |||||||||||    
T  25065955 gatttcgtccctct 25065942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 13295138 - 13295254
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| ||||| || |||||||||||| | |||||||||||| |||||| |||||||||||||||||||||||| || ||  | ||||||||| |    
T  13295138 ttaaatatgcatttcacccctgtaattataggtcatttgatttttcacccctgagcttactaatccttccattttgcccttgtaaaaattaatcatttaa 13295237  T
Q  411 aagttcgtccctcttcc 427  Q
    ||  |||||||||||||    
T  13295238 aatgtcgtccctcttcc 13295254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 411
Target Start/End: Original strand, 2828196 - 2828296
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| ||||||||||| ||||||||  | ||||||||||||||| | | |||||||||||||| |||||||| |||||| || |||||||||||    
T  2828196 ttaaatatgcatttcatccttgcaattatagatcatttgatttttcatccataaacttactaatccttctattttgcctctgcaaatattaatcatttga 2828295  T
Q  411 a 411  Q
    |    
T  2828296 a 2828296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 408
Target Start/End: Complemental strand, 6345732 - 6345637
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcattt 408  Q
    |||||||| |||||||| || |||||  || | |||||  |||||||||||| |||||||||||||||||||||||||||||| || ||| |||||    
T  6345732 aaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcattt 6345637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 373
Target Start/End: Complemental strand, 13295677 - 13295615
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaa 373  Q
    |||||||||| |||||||| |||||||||||||| |||||||||||||| |||| ||||||||    
T  13295677 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaa 13295615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 346 - 411
Target Start/End: Complemental strand, 2829601 - 2829536
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaa 411  Q
    ||||||||||||||| ||| |||||||||||| ||||||| ||||||||| || ||||||||||||    
T  2829601 tttgatttttcatccttgagcttactaatcctcccattttacccctgcaaatattaatcatttgaa 2829536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 25064936 - 25065049
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| || |||||||||   ||||||||||||||||||| |||||||||||| ||||| || ||||  ||  | ||||||||| |    
T  25064936 ttaaatatgcatttcatccctgcaattataggtaatttgatttttcatccctgatcttactaatcctcccattctgtccctataaaaattaatcatttaa 25065035  T
Q  411 aagttcgtccctct 424  Q
     | |||||||||||    
T  25065036 gatttcgtccctct 25065049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 1047585 - 1047486
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||||||| ||||| |||||| | ||||| ||||| || ||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  1047585 ttaaatatgtctttcatccctgtaaatataggtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 1047486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 6344260 - 6344359
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||||| |||||||| ||||||||  || | |||||  |||||||| ||| |||||||||||| ||||||||||| ||||| || ||| |||||||||    
T  6344260 aaatatgcatttcatccctgtaattaggggtcatttgaaatttcatccatgaacttactaatcctcccattttgcccttgcaaatattaaacatttgaaa 6344359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 412
Target Start/End: Complemental strand, 10019728 - 10019653
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||| | ||||| |||||||||||||  ||||||||||||||||||||||  ||||| || |||||||||||||    
T  10019728 tataggtcatttgaattttcatccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaaa 10019653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 326 - 412
Target Start/End: Complemental strand, 46545097 - 46545011
Alignment:
Q  326 atccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||| ||||| |||||| | |||||  |||| |||||||  |||||||||||||||||||||| |||||| || |||||||||||||    
T  46545097 atccctgtaaatataggtcatttgaagtttcgtccctgaagttactaatccttccattttgccactgcaaatattaatcatttgaaa 46545011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 5183861 - 5183788
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||| ||||| |||||||  |||| |||||||||| ||||||||||||| || |||||||||||    
T  5183861 tataggccatttgaattttcgtccctgaagttacgaatccttccaatttgcccctgcaaatattaatcatttga 5183788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 1040301 - 1040400
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| |||||| || |||| ||| ||||| ||||  |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  1040301 ttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 1040400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 1047207 - 1047306
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| |||||| || |||| ||| ||||| ||||  |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  1047207 ttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 1047306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 2953845 - 2953746
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||| | ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  2953845 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 2953746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 388
Target Start/End: Original strand, 32238704 - 32238779
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcc 388  Q
    |||||||| |||||||| || || |||||||  |||||  |||||||||||| |||||||||||| ||||||||||    
T  32238704 aaatatgcatttcatccctgcaaatataggctatttgaaatttcatccctgaacttactaatcctcccattttgcc 32238779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 19755760 - 19755687
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||| | ||||| |||| ||||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  19755760 tataggtcatttgaatttttatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 19755687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 25414873 - 25414946
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||| ||||| || ||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  25414873 tataggccatttgaattttcttctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 25414946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 28534874 - 28534793
Alignment:
Q  331 tgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtact-aatcatttgaa 411  Q
    ||||| |||||| | |||||  |||||||||||| |||||||||||||||||||| || |||||| || | |||||||||||    
T  28534874 tgtaaatatagggcatttgaaatttcatccctgaacttactaatccttccattttacctctgcaaatattaaatcatttgaa 28534793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 29043110 - 29043037
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||| ||||| |||||||  |||||||||||| || | ||||||||||| || |||||||||||    
T  29043110 tataggccatttgaattttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaatcatttga 29043037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 29980993 - 29980920
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||| | ||||| ||||| |||| ||  ||||||||||||||| ||||||||||||| || |||||||||||    
T  29980993 tataggtcatttgaattttcgtcccggaagttactaatccttccaatttgcccctgcaaatattaatcatttga 29980920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 46850013 - 46849940
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||| | ||||| ||||| |||||||  ||||| ||||||||| ||||||||||||| || |||||||||||    
T  46850013 tataggtcatttgaattttcgtccctgaagttactgatccttccaatttgcccctgcaaatattaatcatttga 46849940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 739222 - 739321
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||| | ||||| ||| || || ||||| || ||||| ||||| ||| |||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  739222 ttaaataggtttttcgtccctgcaaatatagaccatttgaattttcgtccttgaagttactaatccttccaatatgcccctgcaaatattaatcatttga 739321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 2953467 - 2953566
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| ||||| |||||| | ||||| ||||| ||||| |  |||||||||||| || | ||||||||||| || |||||||||||    
T  2953467 ttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctaaagttactaatcctttcaatctgcccctgcaaatattaatcatttga 2953566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 26953104 - 26953203
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| |||||| || ||||| |  ||||| ||||| |||||||  |||||||||||| || | ||||||||||| || |||||||||||    
T  26953104 ttaaatatgtctttcgtccttgcaaatatagactatttgaattttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaatcatttga 26953203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 29980642 - 29980741
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||||||||| |||||| | ||||| |||||  || |||  ||||||||| ||||| | ||||||||||| || |||||||||||    
T  29980642 ttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgcccatgaagttactaatctttccaatctgcccctgcaaatattaatcatttga 29980741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 37152919 - 37152820
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || ||||| || ||||| ||||| || ||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  37152919 ttaaatatgtctttcgtccctgcaaatatagtccatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 37152820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 49002879 - 49002978
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||| | ||||| ||||| ||| |||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  49002879 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 49002978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 388
Target Start/End: Complemental strand, 24701639 - 24701573
Alignment:
Q  322 tttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcc 388  Q
    |||||||| || || |||| ||| ||||| ||||| |||||||  ||||||||||||||||||||||    
T  24701639 tttcatccctgcaaatataagccatttgaattttcgtccctgaagttactaatccttccattttgcc 24701573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 5926548 - 5926621
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||| | ||||| ||||| |||||||  ||||||||||||||| | |||||||||||  | |||||||||||    
T  5926548 tataggtcatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaacattaatcatttga 5926621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 5926876 - 5926803
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| || ||||| |||||||||||||  |||||||||| |||| | |||| |||||| || |||||||||||    
T  5926876 tatagaccatttgaattttcatccctgaagttactaatccgtccaatctgcctctgcaaatagtaatcatttga 5926803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 37152567 - 37152640
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||| | ||||| ||||| ||| |||  ||||||||||||||| | ||||| ||||| ||||||||||||||    
T  37152567 tataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccgtgcaaatactaatcatttga 37152640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 6056760 - 6056660
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctg-accttactaatccttccattttgcccctgcaagtactaatcatttg 409  Q
    |||||||||  |||| ||| || || |||| ||| ||||| |||||||||||| |  |||||||||||| || | ||||||||||| || ||||||||||    
T  6056760 ttaaatatgtctttcgtccctgcaaatataagccatttgaattttcatccctgtaagttactaatcctttcaatctgcccctgcaaatattaatcatttg 6056661  T
Q  410 a 410  Q
    |    
T  6056660 a 6056660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 37152471 - 37152535
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| ||||| ||| |||  ||||||||||||||| | ||||| ||||| ||||||||||||||    
T  37152471 tttgaattttcgtccatgaagttactaatccttccaatatgcccttgcaaatactaatcatttga 37152535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 4e-48; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 20072966 - 20072841
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  20072966 ttaaatatgcttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 20072867  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  20072866 aagttcgtccctcttcccggataatc 20072841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 311 - 436
Target Start/End: Original strand, 39181060 - 39181185
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  39181060 ttaaatatgcttttcatccctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 39181159  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  39181160 aagttcgtccctcttcccggataatc 39181185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 313 - 436
Target Start/End: Original strand, 16532898 - 16533021
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| || ||||||||||||||||    
T  16532898 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttattaatccttccattttgcccctgtaattactaatcatttgaaa 16532997  T
Q  413 gttcgtccctcttccagaataatc 436  Q
    ||||||||||||||| | ||||||    
T  16532998 gttcgtccctcttcccggataatc 16533021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 20072124 - 20072240
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||||    
T  20072124 ttaaatatgcttttcatctctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttga 20072223  T
Q  411 aagttcgtccctcttcc 427  Q
    |||||||||||||||||    
T  20072224 aagttcgtccctcttcc 20072240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 16533722 - 16533597
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||| || ||||||||||||||    
T  16533722 ttaaatatgcttttcatccctataattataggccgtttgatttttcatctctgaacttattaatccttccattttgcccctgtaattactaatcatttga 16533623  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  16533622 aagttcgtccctcttcccggataatc 16533597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 39181893 - 39181768
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| |||| |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  39181893 ttaaatatgtttttaatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttga 39181794  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    ||||||||||||||||| | ||||||    
T  39181793 aagttcgtccctcttcccggataatc 39181768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 303 - 427
Target Start/End: Original strand, 36476760 - 36476884
Alignment:
Q  303 ttataaggttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaa 402  Q
    ||||| ||| ||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| || || ||||||    
T  36476760 ttatagggtaaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccttgtaattactaa 36476859  T
Q  403 tcatttgaaagttcgtccctcttcc 427  Q
    |||||||||||||||||||||||||    
T  36476860 tcatttgaaagttcgtccctcttcc 36476884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 313 - 424
Target Start/End: Complemental strand, 36477471 - 36477360
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||| || ||||||||||||||||    
T  36477471 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 36477372  T
Q  413 gttcgtccctct 424  Q
    ||||||||||||    
T  36477371 gttcgtccctct 36477360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 311 - 427
Target Start/End: Original strand, 20856935 - 20857051
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||    |||||||||||    
T  20856935 ttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatttga 20857034  T
Q  411 aagttcgtccctcttcc 427  Q
    || ||||||||||||||    
T  20857035 aatttcgtccctcttcc 20857051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 20857644 - 20857528
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||||||||| |||||||||||||| ||    |||||||||||    
T  20857644 ttaaatatgcttttcatccatgtaattataggccgtttgatttttcattcctaagcttactaatcctcccattttgcccctgtaaaagttaatcatttga 20857545  T
Q  411 aagttcgtccctcttcc 427  Q
    || ||||||||||||||    
T  20857544 aatttcgtccctcttcc 20857528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 420
Target Start/End: Complemental strand, 21978112 - 21978005
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||| ||| |||||||||| || ||||||||||||||||    
T  21978112 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccactttgcccctgtaattactaatcatttgaaa 21978013  T
Q  413 gttcgtcc 420  Q
     |||||||    
T  21978012 attcgtcc 21978005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 420
Target Start/End: Original strand, 8654110 - 8654219
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||||||||| |||||||||||| | ||||||||||||||| ||| |||||||||||| |||||||| |||||||| ||||||||||||||    
T  8654110 ttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatcctcccattttgtccctgcaattactaatcatttga 8654209  T
Q  411 aagttcgtcc 420  Q
    || |||||||    
T  8654210 aaattcgtcc 8654219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 436
Target Start/End: Complemental strand, 22870559 - 22870434
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||  | ||||||||| |    
T  22870559 ttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaa 22870460  T
Q  411 aagttcgtccctcttccagaataatc 436  Q
    || |||||| ||||||| || |||||    
T  22870459 aatttcgtctctcttcccgattaatc 22870434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 315 - 427
Target Start/End: Original strand, 22869612 - 22869724
Alignment:
Q  315 atatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaagt 414  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| ||  | ||| ||||| ||| |    
T  22869612 atatgcatttcatccttgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaaccatttaaaatt 22869711  T
Q  415 tcgtccctcttcc 427  Q
    |||||||||||||    
T  22869712 tcgtccctcttcc 22869724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 420
Target Start/End: Complemental strand, 14744827 - 14744718
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| || ||||||| | | ||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||||||||    
T  14744827 ttaaatatgcatttcatccctgcaattatatgtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 14744728  T
Q  411 aagttcgtcc 420  Q
    |  |||||||    
T  14744727 attttcgtcc 14744718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 420
Target Start/End: Original strand, 21972095 - 21972201
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||| ||||||||| ||||||||| |||| ||||||||||||||| | | |||||||||||| ||||||||| |||| || ||||||||||||||||    
T  21972095 aaatatgtttttcatccctgtaattatgggccatttgatttttcatcc-tcagcttactaatcctcccattttgctcctgtaattactaatcatttgaaa 21972193  T
Q  413 gttcgtcc 420  Q
     |||||||    
T  21972194 attcgtcc 21972201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 393
Target Start/End: Original strand, 31107934 - 31108016
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgc 393  Q
    |||||||||| |||||||| || ||||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||||||    
T  31107934 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttacccctgc 31108016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 37945008 - 37945096
Alignment:
Q  322 tttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||| ||||||||| |||||| | ||||| ||||| |||||||  ||||||||||||||| ||||||||||||| || |||||||||||    
T  37945008 tttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttga 37945096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 39402210 - 39402146
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||| || |||||||||||    
T  39402210 tttgatttttcatccctggacttactaatcctcccattttgcccctgcaaatattaatcatttga 39402146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 410
Target Start/End: Original strand, 25253084 - 25253188
Alignment:
Q  306 taaggttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatca 405  Q
    |||| |||||||||  |||||||| || || |||||  | ||||| ||||| |||||||  ||||||||||||||| ||||||||||||| || ||||||    
T  25253084 taagcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatca 25253183  T
Q  406 tttga 410  Q
    |||||    
T  25253184 tttga 25253188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 410
Target Start/End: Original strand, 25316874 - 25316978
Alignment:
Q  306 taaggttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatca 405  Q
    |||| |||||||||  |||||||| || || |||||  | ||||| ||||| |||||||  ||||||||||||||| ||||||||||||| || ||||||    
T  25316874 taagcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatca 25316973  T
Q  406 tttga 410  Q
    |||||    
T  25316974 tttga 25316978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 32052227 - 32052326
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||| ||||| ||| ||||| |||||| | ||||| ||||| |||||||  ||||||||||||||| |  |||||||||| || |||||||||||    
T  32052227 ttaaatatgtttttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatttga 32052326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 14745477 - 14745550
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||| | ||||| |||||||||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  14745477 tataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 14745550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 33735342 - 33735415
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||||||||| |||||||  ||||||||||||||| | || |||||||| || |||||||||||    
T  33735342 tataggccatttgatttttcgtccctgaaattactaatccttccaatctgtccctgcaaatattaatcatttga 33735415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 8673853 - 8673754
Alignment:
Q  313 aaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||||| |||||||| || || |||||||| |||||  |||||||| ||| ||| ||||| || ||||||||||| ||||| |  |||||||||||||    
T  8673853 aaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttgctaattctcccattttgcccttgcaattgttaatcatttgaaa 8673754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 412
Target Start/End: Original strand, 21260894 - 21260969
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||| | ||||| ||||| |||||||  ||||||||||||||||||||||  ||||| || |||||||||||||    
T  21260894 tataggtcatttgaattttcgtccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaaa 21260969  T

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Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 25253467 - 25253368
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||| | ||||| ||||| |||||||  ||||||||||||||| | ||||| ||||| ||||||||||||||    
T  25253467 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatttga 25253368  T

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Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 25317258 - 25317159
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||| | ||||| ||||| |||||||  ||||||||||||||| | ||||| ||||| ||||||||||||||    
T  25317258 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatttga 25317159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 32052605 - 32052506
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| || || |||||| | ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  32052605 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 32052506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 412
Target Start/End: Complemental strand, 7015879 - 7015789
Alignment:
Q  322 tttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||| |||||| || |||| | ||||||| ||||| |||||||  ||||||||||||||| | |||| |||||| || |||||||||||||    
T  7015879 tttcgtccttgcaaatataagtcgtttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaaa 7015789  T

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Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 377
Target Start/End: Complemental strand, 21979068 - 21979002
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatcct 377  Q
    |||||||||| |||||||| || ||||||| ||| |||||||||||||||  || ||||||||||||    
T  21979068 ttaaatatgcatttcatccctgcaattataagccatttgatttttcatcctcgaacttactaatcct 21979002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 33735668 - 33735595
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||| | ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  33735668 tataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 33735595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 408
Target Start/End: Complemental strand, 31108400 - 31108338
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcattt 408  Q
    ||||||||||||||| ||| |||||||||| |||||||||  ||||| || || |||||||||    
T  31108400 tttgatttttcatccatgaacttactaatctttccattttatccctgtaaatattaatcattt 31108338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Original strand, 7015537 - 7015610
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||| ||||||||| |||  ||||||||| ||||| | |||| |||||| || |||||||||||    
T  7015537 tataggccatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcatttga 7015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 410
Target Start/End: Complemental strand, 14745668 - 14745595
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||| ||||| ||||| || ||||  ||||||||||||||| | ||||| ||||| || |||||||||||    
T  14745668 tataggccatttgaattttcgtcgctgaagttactaatccttccaatctgcccttgcaaatattaatcatttga 14745595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 412
Target Start/End: Complemental strand, 22024195 - 22024150
Alignment:
Q  367 ttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    ||||||||||||||| |||||| |||||| || |||||||||||||    
T  22024195 ttactaatccttccaatttgccactgcaaatattaatcatttgaaa 22024150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 6421968 - 6421904
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| ||||| |||||||  |||||||||||| || | ||||||||||| || |||||||||||    
T  6421968 tttgaattttcgtccctgaaattactaatcctttcaatatgcccctgcaaatattaatcatttga 6421904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 302 - 412
Target Start/End: Complemental strand, 14483 - 14373
Alignment:
Q  302 attataaggttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtacta 401  Q
    |||||| | |||||||||||||||| || |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||    
T  14483 attataggcttaaatatgcttttcacccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttacccctgcaattacta 14384  T
Q  402 atcatttgaaa 412  Q
    |||||||||||    
T  14383 atcatttgaaa 14373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 311 - 420
Target Start/End: Original strand, 13137 - 13246
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| ||||| ||||| || |||||||||||||| ||||  ||| ||||||| ||||||||||||||||| ||||||||||||||    
T  13137 ttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctgagtttagtaatcctcccattttgcccctgcaattactaatcatttga 13236  T
Q  411 aagttcgtcc 420  Q
    || |||||||    
T  13237 aaattcgtcc 13246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 73112 - 73213
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||| |||||||||||| |||||||||||||| || ||||||||||||||    
T  73112 ttaaatatgcttttcatccctgtaattatgggccatttgacttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttga 73211  T
Q  411 aa 412  Q
    ||    
T  73212 aa 73213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 424
Target Start/End: Original strand, 13612 - 13725
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| || ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||  ||  | ||||||||| |    
T  13612 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgagcttactaatccttccattttgcccctataaaaattaatcatttaa 13711  T
Q  411 aagttcgtccctct 424  Q
     | |||||||||||    
T  13712 gatttcgtccctct 13725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 424
Target Start/End: Complemental strand, 14690 - 14577
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||| | |  ||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||  ||  | ||||||||| |    
T  14690 ttaaatatgcatttcattccttcaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctataaaaattaatcatttaa 14591  T
Q  411 aagttcgtccctct 424  Q
     | |||||||||||    
T  14590 gatttcgtccctct 14577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 408
Target Start/End: Complemental strand, 262538 - 262441
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcattt 408  Q
    |||||||||| |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| ||||||| ||||||||| || |||||||||    
T  262538 ttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatttttcccctgcaaatattaatcattt 262441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 311 - 411
Target Start/End: Original strand, 261004 - 261104
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||| || ||||||||| | ||||||||||||||| |||  ||||||||||| ||||||||||||||||| || |||||||||||    
T  261004 ttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccatgaatttactaatcctcccattttgcccctgcaaatattaatcatttga 261103  T
Q  411 a 411  Q
    |    
T  261104 a 261104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 596 - 695
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||| |||||||  || ||||||||| | ||||||||||||||||||| ||||||||||||  |||||||||||||||| || |||||||||||    
T  596 ttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatttga 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 974 - 875
Alignment:
Q  311 ttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    |||||||||  |||| ||| ||||| ||| |||| ||||| ||||| |||||||  ||||||||||||||| | ||||||||||| || |||||||||||    
T  974 ttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 346 - 410
Target Start/End: Original strand, 10363 - 10427
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| ||||| |||||||  ||||||||||||||| ||||||||||||| || |||||||||||    
T  10363 tttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttga 10427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 337 - 412
Target Start/End: Original strand, 8462 - 8537
Alignment:
Q  337 tataggccgtttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttgaaa 412  Q
    |||||| | ||||| ||||| |||||||  ||||||||||||||| | |||| |||||| || |||||||||||||    
T  8462 tataggtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaaa 8537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 346 - 410
Target Start/End: Complemental strand, 14239 - 14175
Alignment:
Q  346 tttgatttttcatccctgaccttactaatccttccattttgcccctgcaagtactaatcatttga 410  Q
    ||||| |||||||| ||||  ||||||||||||||| | ||||||| ||| || |||||||||||    
T  14239 tttgaattttcatcactgaagttactaatccttccaatctgcccctacaaatattaatcatttga 14175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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