View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19786_low_74 (Length: 284)
Name: NF19786_low_74
Description: NF19786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19786_low_74 |
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Alignment Details
Target: chr2 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 4 - 269
Target Start/End: Complemental strand, 39557033 - 39556768
Alignment:
| Q |
4 |
atgttgtaataggtcagtttatgagatccaccgtcggaccaagatcatattagagattcatatatagtaataagttttaggttgtgataaaagtaataca |
103 |
Q |
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| T |
39557033 |
atgttgtaataggtcagtttatgagatccaccgtcggaccaagatcatattagagattcatatatagtaataagttttaggttgtgataaaagtaataca |
39556934 |
T |
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| Q |
104 |
caagcaagtcgatcctagctagctaacacctcatttgagtcaatatcatcttagtaggcaaagcatagtacataatgagtgataattaaagagattaaat |
203 |
Q |
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| T |
39556933 |
caagcaagtcgatcctagctagctaacacctcatttgagtcaatatcatcttagtaagcaaagcatagtacataatgagtgataattaaagagattaaat |
39556834 |
T |
|
| Q |
204 |
taatcaattaccattacttgatatggaaattcaagaaaagtgcatggttgagcttgattcatcatt |
269 |
Q |
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| T |
39556833 |
taatcaattaccattacttgatatggaaattcaagaaaagtgcatggttgagcttgattcatcatt |
39556768 |
T |
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