View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19786_low_90 (Length: 256)
Name: NF19786_low_90
Description: NF19786
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19786_low_90 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 5159418 - 5159653
Alignment:
| Q |
1 |
gaagtactcctgtgtttaatctgtcaaatttaactgataattctccatggtatgttttcccttatctaaactttat-ttgcaaagcatggctatttgtgg |
99 |
Q |
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| T |
5159418 |
gaagtactcctgtgtttaatctgtcaaatttaactgataattctccatggtatgttttcccttatctaaactttatcttgcaaagcatggctatttgtgg |
5159517 |
T |
|
| Q |
100 |
acccaacaagaagaaagcacatagccaatacctaccaaccaaactaatcacattatcctcaacagctctttcacaaccacaaaccaaaccagaaaaaaca |
199 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5159518 |
acccaacaagaagaaagcacatagccaataactaccaaccaaactaatcacattatcctcaacagctctttcacaaccacaaaccaaaccagaaaaaaca |
5159617 |
T |
|
| Q |
200 |
tcactcattctcagactacacaaaggtcacaaacag |
235 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
5159618 |
tcactcattctcagactacacaaaggtcacaaacag |
5159653 |
T |
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