View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19787_high_25 (Length: 343)
Name: NF19787_high_25
Description: NF19787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19787_high_25 |
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Alignment Details
Target: chr8 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 14 - 326
Target Start/End: Complemental strand, 37498355 - 37498043
Alignment:
| Q |
14 |
aaggatgacactgataaaaaccaatatgagcatgatgaatccgttgggataatcacgggcgatgaaggacagagaagataaaataatcagaatcatattg |
113 |
Q |
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| T |
37498355 |
aaggatgacactgataaaaaccaatatgagcatgatgaatccgttgggataatcacgggcgatgaaggacagagaagataaaataatcagaatcatattg |
37498256 |
T |
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| Q |
114 |
aaaggatggaaaagagcattccatagaagattccaccagcttggaaatgaatactcaagtggaacatttggaccattttcccgcagcctcctctcagctt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37498255 |
aaaggatggaaaagagcattccatagaagattccacaagcttggaaatgaatactcaagtggaacatttggaccattttcccgcagcctcctctcagctt |
37498156 |
T |
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| Q |
214 |
cagtaaaacttaagcctgcaaaaaattcaagaacacagttaacacaaaaggggtaaaataacacaaacgaatactcgagggtagtgtttacttactgatc |
313 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37498155 |
cagtaaaacttaagcctgcaaaaaattcaagaacacagttaacacaaaagggggaaaataacacaaacgaatactcgagggtagtgtttacttactgatc |
37498056 |
T |
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| Q |
314 |
agaacaatgaaaa |
326 |
Q |
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||||||||||||| |
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| T |
37498055 |
agaacaatgaaaa |
37498043 |
T |
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