View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19787_high_27 (Length: 336)

Name: NF19787_high_27
Description: NF19787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19787_high_27
NF19787_high_27
[»] chr3 (40 HSPs)
chr3 (143-321)||(50467550-50467728)
chr3 (83-144)||(20488364-20488425)
chr3 (83-148)||(39820604-39820669)
chr3 (83-140)||(47433809-47433866)
chr3 (83-138)||(11914833-11914888)
chr3 (83-150)||(22508727-22508794)
chr3 (83-140)||(39819314-39819371)
chr3 (83-140)||(40477374-40477431)
chr3 (83-140)||(43641145-43641202)
chr3 (83-140)||(45268570-45268627)
chr3 (83-140)||(46104345-46104402)
chr3 (83-140)||(52401019-52401076)
chr3 (83-140)||(52403124-52403181)
chr3 (83-140)||(52708617-52708674)
chr3 (83-140)||(53121304-53121361)
chr3 (83-140)||(54437467-54437524)
chr3 (83-140)||(20489358-20489415)
chr3 (83-140)||(45267307-45267364)
chr3 (83-140)||(46026078-46026135)
chr3 (83-140)||(48033060-48033117)
chr3 (89-150)||(51004134-51004195)
chr3 (83-140)||(53122471-53122528)
chr3 (87-139)||(52707539-52707591)
chr3 (83-140)||(976782-976839)
chr3 (83-140)||(3416497-3416554)
chr3 (83-140)||(4705683-4705740)
chr3 (83-140)||(9855180-9855237)
chr3 (111-148)||(14633539-14633576)
chr3 (87-140)||(20585648-20585701)
chr3 (111-140)||(29445956-29445985)
chr3 (111-140)||(30268507-30268536)
chr3 (83-140)||(32635596-32635653)
chr3 (83-140)||(32637188-32637245)
chr3 (91-140)||(40476223-40476272)
chr3 (91-140)||(42446528-42446577)
chr3 (111-140)||(45320948-45320977)
chr3 (83-140)||(46027417-46027474)
chr3 (111-140)||(46186411-46186440)
chr3 (111-139)||(20757403-20757431)
chr3 (92-140)||(44507808-44507856)
[»] chr7 (35 HSPs)
chr7 (83-149)||(31848144-31848210)
chr7 (83-139)||(32544774-32544830)
chr7 (83-140)||(17066427-17066484)
chr7 (83-148)||(24197103-24197168)
chr7 (83-140)||(32197909-32197966)
chr7 (83-139)||(12385707-12385763)
chr7 (83-139)||(38742184-38742240)
chr7 (83-146)||(12933415-12933478)
chr7 (83-140)||(5611507-5611564)
chr7 (83-140)||(13418952-13419009)
chr7 (83-140)||(24195609-24195666)
chr7 (83-140)||(41693647-41693704)
chr7 (83-136)||(43869912-43869965)
chr7 (83-140)||(31853550-31853607)
chr7 (87-140)||(32196686-32196739)
chr7 (83-140)||(35212070-35212127)
chr7 (83-148)||(40576760-40576825)
chr7 (83-140)||(41694955-41695012)
chr7 (83-139)||(11217071-11217127)
chr7 (111-151)||(45021825-45021865)
chr7 (89-140)||(554247-554298)
chr7 (111-145)||(18022673-18022707)
chr7 (83-137)||(25037755-25037809)
chr7 (83-141)||(28462628-28462686)
chr7 (90-140)||(31489942-31489992)
chr7 (111-148)||(10357995-10358032)
chr7 (111-144)||(17854147-17854180)
chr7 (111-140)||(21223407-21223436)
chr7 (111-140)||(30709613-30709642)
chr7 (111-140)||(31310367-31310396)
chr7 (111-140)||(32189078-32189107)
chr7 (83-140)||(42254960-42255017)
chr7 (83-139)||(5610159-5610215)
chr7 (111-147)||(28911572-28911608)
chr7 (83-139)||(31846989-31847045)
[»] scaffold0230 (1 HSPs)
scaffold0230 (83-140)||(431-488)
[»] chr8 (39 HSPs)
chr8 (83-140)||(28996836-28996893)
chr8 (83-140)||(4183979-4184036)
chr8 (83-153)||(10718448-10718519)
chr8 (83-137)||(34904509-34904563)
chr8 (83-153)||(45516386-45516456)
chr8 (83-148)||(1376929-1376994)
chr8 (83-140)||(4182624-4182681)
chr8 (83-140)||(10717123-10717180)
chr8 (83-140)||(22272270-22272327)
chr8 (83-142)||(38455447-38455506)
chr8 (83-145)||(38456730-38456792)
chr8 (87-144)||(3483631-3483688)
chr8 (83-140)||(22534722-22534779)
chr8 (83-140)||(28997993-28998050)
chr8 (83-140)||(36588224-36588281)
chr8 (83-140)||(36589387-36589444)
chr8 (83-140)||(38658483-38658540)
chr8 (87-140)||(41847184-41847237)
chr8 (85-145)||(45517962-45518022)
chr8 (83-137)||(1385555-1385609)
chr8 (95-140)||(9465320-9465365)
chr8 (83-140)||(22270945-22271002)
chr8 (83-140)||(22533319-22533376)
chr8 (83-139)||(41846650-41846706)
chr8 (111-146)||(28399004-28399039)
chr8 (94-140)||(10292818-10292864)
chr8 (111-149)||(24187866-24187904)
chr8 (83-128)||(297119-297164)
chr8 (87-140)||(1420446-1420499)
chr8 (83-140)||(14197827-14197884)
chr8 (111-140)||(21509887-21509916)
chr8 (83-140)||(30124223-30124280)
chr8 (111-140)||(33526381-33526410)
chr8 (111-148)||(33636316-33636353)
chr8 (111-140)||(38930633-38930662)
chr8 (83-140)||(39439926-39439983)
chr8 (111-147)||(5357418-5357454)
chr8 (111-147)||(19494114-19494150)
chr8 (111-139)||(33652193-33652221)
[»] chr6 (25 HSPs)
chr6 (83-140)||(18810534-18810591)
chr6 (83-140)||(20897497-20897554)
chr6 (87-151)||(17516153-17516217)
chr6 (83-139)||(20391217-20391273)
chr6 (83-140)||(16995453-16995510)
chr6 (83-140)||(21953208-21953265)
chr6 (83-140)||(21165248-21165305)
chr6 (83-140)||(34998141-34998198)
chr6 (83-145)||(34995111-34995173)
chr6 (83-140)||(1972402-1972459)
chr6 (83-140)||(3276369-3276426)
chr6 (87-140)||(17000281-17000334)
chr6 (83-140)||(17517309-17517366)
chr6 (83-140)||(20393268-20393325)
chr6 (111-159)||(543693-543741)
chr6 (95-143)||(20895957-20896005)
chr6 (94-142)||(25439648-25439696)
chr6 (83-140)||(1170441-1170498)
chr6 (87-140)||(1974156-1974209)
chr6 (111-140)||(11448539-11448568)
chr6 (83-140)||(26421843-26421900)
chr6 (87-140)||(29291361-29291414)
chr6 (111-140)||(30929013-30929042)
chr6 (111-140)||(31398510-31398539)
chr6 (111-151)||(318066-318106)
[»] scaffold0106 (2 HSPs)
scaffold0106 (83-146)||(30907-30970)
scaffold0106 (83-140)||(29731-29788)
[»] chr1 (43 HSPs)
chr1 (83-145)||(27264216-27264278)
chr1 (83-145)||(35721098-35721160)
chr1 (83-140)||(9774888-9774945)
chr1 (83-140)||(20722474-20722531)
chr1 (83-140)||(34934747-34934804)
chr1 (83-140)||(37395635-37395692)
chr1 (83-140)||(47038868-47038925)
chr1 (83-137)||(17976766-17976820)
chr1 (83-137)||(17977559-17977613)
chr1 (83-137)||(27816720-27816774)
chr1 (83-140)||(11711254-11711310)
chr1 (83-140)||(20723688-20723745)
chr1 (83-140)||(26863862-26863919)
chr1 (83-140)||(27262910-27262967)
chr1 (83-140)||(35911888-35911945)
chr1 (83-140)||(37396840-37396897)
chr1 (83-140)||(46075050-46075107)
chr1 (83-147)||(46073880-46073944)
chr1 (83-137)||(27815446-27815500)
chr1 (83-140)||(23469969-23470026)
chr1 (83-140)||(24422517-24422574)
chr1 (83-140)||(24609921-24609978)
chr1 (83-140)||(30724015-30724072)
chr1 (83-140)||(39163024-39163081)
chr1 (87-140)||(48588965-48589018)
chr1 (83-139)||(9774040-9774096)
chr1 (111-147)||(15335264-15335300)
chr1 (111-146)||(1811204-1811239)
chr1 (93-140)||(45979506-45979553)
chr1 (87-142)||(51240119-51240174)
chr1 (94-140)||(2604138-2604184)
chr1 (83-145)||(35910650-35910711)
chr1 (111-140)||(3679955-3679984)
chr1 (111-140)||(17984670-17984699)
chr1 (83-140)||(24427369-24427426)
chr1 (111-148)||(26324916-26324953)
chr1 (83-140)||(26865184-26865241)
chr1 (111-140)||(44641401-44641430)
chr1 (111-140)||(48955716-48955745)
chr1 (111-140)||(50429178-50429207)
chr1 (118-158)||(37545894-37545934)
chr1 (111-147)||(41358632-41358668)
chr1 (84-140)||(50164405-50164461)
[»] chr4 (41 HSPs)
chr4 (91-148)||(35054656-35054713)
chr4 (83-140)||(17281573-17281630)
chr4 (83-140)||(17370075-17370132)
chr4 (90-150)||(41933810-41933870)
chr4 (83-140)||(22204057-22204114)
chr4 (83-140)||(42359346-42359403)
chr4 (83-140)||(44705301-44705358)
chr4 (83-140)||(45618287-45618344)
chr4 (83-140)||(45619731-45619788)
chr4 (83-139)||(16574368-16574424)
chr4 (83-139)||(17371845-17371901)
chr4 (83-151)||(40198568-40198633)
chr4 (83-145)||(54121700-54121762)
chr4 (83-140)||(3879088-3879145)
chr4 (83-140)||(3880496-3880553)
chr4 (83-140)||(19674416-19674473)
chr4 (83-140)||(22205222-22205279)
chr4 (83-140)||(33137228-33137285)
chr4 (111-143)||(9445948-9445980)
chr4 (88-140)||(32699319-32699371)
chr4 (83-143)||(47359513-47359573)
chr4 (111-150)||(18205492-18205531)
chr4 (83-137)||(17326734-17326788)
chr4 (111-149)||(20291979-20292017)
chr4 (83-149)||(42358025-42358091)
chr4 (111-140)||(4279304-4279333)
chr4 (111-140)||(6827843-6827872)
chr4 (111-140)||(11285505-11285534)
chr4 (91-144)||(16916065-16916118)
chr4 (87-140)||(19675624-19675677)
chr4 (83-140)||(29059715-29059772)
chr4 (83-140)||(29060882-29060939)
chr4 (95-140)||(32698001-32698046)
chr4 (92-149)||(38166488-38166545)
chr4 (111-147)||(123529-123565)
chr4 (111-151)||(13064434-13064474)
chr4 (84-140)||(16573380-16573436)
chr4 (111-143)||(30564832-30564864)
chr4 (91-139)||(41935078-41935126)
chr4 (111-143)||(43368464-43368496)
chr4 (111-147)||(52441758-52441794)
[»] chr2 (32 HSPs)
chr2 (83-140)||(25977872-25977929)
chr2 (83-140)||(25979251-25979308)
chr2 (83-144)||(4040216-4040277)
chr2 (83-140)||(1777471-1777528)
chr2 (83-140)||(2412428-2412485)
chr2 (83-140)||(11087051-11087108)
chr2 (83-149)||(8809589-8809656)
chr2 (83-149)||(20245305-20245372)
chr2 (83-145)||(23861749-23861811)
chr2 (83-149)||(36837778-36837844)
chr2 (83-140)||(1778790-1778847)
chr2 (83-140)||(2411264-2411321)
chr2 (83-140)||(11088680-11088737)
chr2 (83-140)||(25283272-25283329)
chr2 (83-140)||(30843646-30843703)
chr2 (83-139)||(43824166-43824222)
chr2 (111-150)||(36622553-36622592)
chr2 (111-150)||(43788850-43788889)
chr2 (83-141)||(8810703-8810761)
chr2 (111-149)||(11788385-11788423)
chr2 (83-140)||(4038844-4038901)
chr2 (111-140)||(7814706-7814735)
chr2 (111-140)||(12835327-12835356)
chr2 (83-140)||(19604919-19604976)
chr2 (111-140)||(23989840-23989869)
chr2 (83-140)||(24748214-24748270)
chr2 (87-140)||(29794321-29794373)
chr2 (111-140)||(29865223-29865252)
chr2 (111-140)||(41693972-41694001)
chr2 (111-144)||(44985619-44985652)
chr2 (111-147)||(10671910-10671946)
chr2 (111-139)||(17912452-17912480)
[»] scaffold0517 (2 HSPs)
scaffold0517 (83-140)||(11522-11579)
scaffold0517 (83-140)||(10317-10374)
[»] scaffold0002 (4 HSPs)
scaffold0002 (83-140)||(345897-345954)
scaffold0002 (83-137)||(344942-344996)
scaffold0002 (83-140)||(374337-374394)
scaffold0002 (95-140)||(376381-376426)
[»] scaffold0001 (2 HSPs)
scaffold0001 (83-140)||(119595-119652)
scaffold0001 (83-140)||(120985-121042)
[»] chr5 (22 HSPs)
chr5 (83-140)||(3936580-3936637)
chr5 (83-140)||(4565395-4565452)
chr5 (83-140)||(27571129-27571186)
chr5 (83-145)||(3205102-3205164)
chr5 (83-145)||(3938060-3938122)
chr5 (83-140)||(3954054-3954111)
chr5 (83-144)||(27098364-27098425)
chr5 (83-140)||(31540498-31540555)
chr5 (83-137)||(4777645-4777699)
chr5 (83-140)||(34911828-34911885)
chr5 (89-149)||(15599758-15599818)
chr5 (111-142)||(16038709-16038740)
chr5 (89-140)||(27570058-27570109)
chr5 (83-141)||(25254131-25254189)
chr5 (83-141)||(25317921-25317979)
chr5 (111-140)||(29151518-29151547)
chr5 (111-140)||(29693059-29693088)
chr5 (110-143)||(31037394-31037427)
chr5 (83-140)||(31541622-31541679)
chr5 (88-140)||(14809165-14809217)
chr5 (111-143)||(27850343-27850375)
chr5 (111-139)||(39379242-39379270)
[»] scaffold0599 (1 HSPs)
scaffold0599 (83-138)||(6584-6639)
[»] scaffold0562 (1 HSPs)
scaffold0562 (83-140)||(9924-9981)
[»] scaffold0765 (1 HSPs)
scaffold0765 (83-139)||(1863-1919)
[»] scaffold0373 (1 HSPs)
scaffold0373 (111-140)||(8549-8578)
[»] scaffold0021 (1 HSPs)
scaffold0021 (111-140)||(12505-12534)
[»] scaffold0009 (1 HSPs)
scaffold0009 (83-140)||(202581-202638)
[»] scaffold0712 (1 HSPs)
scaffold0712 (111-151)||(5200-5240)
[»] scaffold0709 (1 HSPs)
scaffold0709 (111-151)||(5220-5260)


Alignment Details
Target: chr3 (Bit Score: 179; Significance: 1e-96; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 143 - 321
Target Start/End: Original strand, 50467550 - 50467728
Alignment:
Q  143 tatttttatatagagaggctttgtgtggaagggatgagtaacttcccaggtaatcacgaggaaataatagaagagtctttgtaaattaaactagaagcct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50467550 tatttttatatagagaggctttgtgtggaagggatgagtaacttcccaggtaatcacgaggaaataatagaagagtctttgtaaattaaactagaagcct 50467649  T
Q  243 agagctttccatcttcctagttatagctggattgatgtgacgaggagtggttatatagcttaaagttcaacatagaact 321  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50467650 agagctttccatcttcctagttatagctggattgatgtgacgaggagtggttatatagcttaaagttcaacatagaact 50467728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 20488425 - 20488364
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtcta 144  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||    
T  20488425 ttaccagggaccaaaacccaaattcaccatatttgcagggaccaaaaacatattttagtcta 20488364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 39820604 - 39820669
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctatttt 148  Q
    |||||||||||||||||||||| || |||||||||||||||| |||| |||||||||| |||||||    
T  39820604 ttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaaccatattttagcctatttt 39820669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 47433809 - 47433866
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| ||||||| |||||||||||||||| |||| ||||||||||    
T  47433809 ttaccagggaccaaaactcaaattcgctatatttgcagggaccaaaaccatattttag 47433866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 11914833 - 11914888
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttt 138  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| || |||||    
T  11914833 ttaccaggcaccaaaacccaaattcgctatatttgcagggactaaaagcacatttt 11914888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 22508794 - 22508727
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctattttta 150  Q
    |||||| |||||||||| |||| || |||||||||||||||| ||||||||||||||  |||||||||    
T  22508794 ttaccaaggaccaaaactcaaactcgctatatttgcagggaccaaaatcatattttaacctattttta 22508727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 39819371 - 39819314
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||  |||| || ||||||||||||||||||||| ||||||||||    
T  39819371 ttaccagggaccaaaattcaaactcgctatatttgcagggactaaaaccatattttag 39819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 40477374 - 40477431
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| ||||||||||||||||| ||  ||||||||||||||| |||||||||||||||    
T  40477374 ttactagggaccaaaacccaaactcgttatatttgcagggaccaaaatcatattttag 40477431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 43641202 - 43641145
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||| || ||||| || ||||||||||||||||||||| ||||||||||    
T  43641202 ttaccagggaccataatccaaactcgctatatttgcagggactaaaagcatattttag 43641145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 45268570 - 45268627
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| |  ||||||||||||||| ||||| ||||||||||    
T  45268570 ttaccagggaccaaaacccaaacttgctatatttgcagggattaaaaacatattttag 45268627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 46104402 - 46104345
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| ||||| |||| || |||||||||||||||| |||||||||||||||    
T  46104402 ttaccagggacaaaaactcaaactcgctatatttgcagggaccaaaatcatattttag 46104345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 52401076 - 52401019
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| || | |||||||||||||| |||| ||||||||||    
T  52401076 ttaccagggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttag 52401019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 52403124 - 52403181
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| || | |||||||||||||| |||| ||||||||||    
T  52403124 ttaccagggaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttag 52403181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 52708617 - 52708674
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||| |||||||||||||| || |||||||||||||||| |||| ||||||||||    
T  52708617 ttaccagagaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttag 52708674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 53121361 - 53121304
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| |||||||||| || |||||||||||||||| |||| ||||||||||    
T  53121361 ttaccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 53121304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 54437467 - 54437524
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| |||||||||||| ||||||| |||||||||||||||| |||| ||||||||||    
T  54437467 ttactagggaccaaaactcaaattcgctatatttgcagggaccaaaaacatattttag 54437524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 20489358 - 20489415
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| ||   |||||||||||||| |||| ||||||||||    
T  20489358 ttaccagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttag 20489415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 45267364 - 45267307
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| |||| || |||||||||||||||  |||| ||||||||||    
T  45267364 ttaccagggaccaaaactcaaactcgctatatttgcagggatcaaaaacatattttag 45267307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 46026135 - 46026078
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| ||||||||||| ||||| || |||||||||||||||| |||| ||||||||||    
T  46026135 ttactagggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttag 46026078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 48033117 - 48033060
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||| ||||| |||| ||||||||| |||| |||| ||||||||||    
T  48033117 ttaccagggaccaaaatccaaactcaccatatttgcaaggaccaaaaacatattttag 48033060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 51004195 - 51004134
Alignment:
Q  89 gggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctattttta 150  Q
    ||||||||||||||||||| | |||||| ||||| |||||| |||||||||| |||| ||||    
T  51004195 gggaccaaaacccaaattcgccatatttacagggtctaaaaacatattttagcctatattta 51004134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 53122471 - 53122528
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||  | | || ||||||||||||||||||||| ||||||||||    
T  53122471 ttaccagggaccaaaacttacactctctatatttgcagggactaaaagcatattttag 53122528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 52707591 - 52707539
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    ||||||||||||| ||||||| ||||||||||| |||| |||| |||||||||    
T  52707591 cagggaccaaaactcaaattcgctatatttgcaaggaccaaaaacatatttta 52707539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 976839 - 976782
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| |||||  |||||| |||||||||||||||  |||| ||||||||||    
T  976839 ttaccagggactaaaacttaaattcgctatatttgcagggatcaaaagcatattttag 976782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 3416554 - 3416497
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||| ||||| |  |||||||| ||||||  |||||||||||||||    
T  3416554 ttaccagggaccaaaaaccaaacttgctatatttacagggatcaaaatcatattttag 3416497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 4705740 - 4705683
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||| ||| || | |||||||||||||  |||| ||||||||||    
T  4705740 ttaccagggaccaaaacctaaactcgccatatttgcagggatcaaaagcatattttag 4705683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 9855237 - 9855180
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| ||||||||||| ||||| || |||||||| ||||||  |||||||||||||||    
T  9855237 ttactagggaccaaaatccaaactcgctatatttacagggatcaaaatcatattttag 9855180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 14633576 - 14633539
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctatttt 148  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  14633576 atatttgcagggactaaaaccatattttagtctttttt 14633539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 20585648 - 20585701
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||| ||||| || |||||||||||||||  |||| ||||||||||    
T  20585648 cagggaccaaaatccaaactcgctatatttgcagggatcaaaaacatattttag 20585701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 29445985 - 29445956
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  29445985 atatttgcagggactaaaatcatattttag 29445956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 30268536 - 30268507
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  30268536 atatttgcagggactaaaatcatattttag 30268507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 32635653 - 32635596
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| || |||||||| || |||| ||||  |||||||||    
T  32635653 ttaccagggaccaaaacccaaactcgctatatttacaaggacaaaaaatatattttag 32635596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 32637188 - 32637245
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||| ||||||||||||| || ||| |||| ||||||| |||| ||||||||||    
T  32637188 ttaccaggaaccaaaacccaaactcgctacatttacagggaccaaaagcatattttag 32637245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 40476272 - 40476223
Alignment:
Q  91 gaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||| ||||| || |||||||||||||||| |||| ||||||||||    
T  40476272 gaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttag 40476223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 42446577 - 42446528
Alignment:
Q  91 gaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||| || | |||||||||||||| |||| ||||||||||    
T  42446577 gaccaaaacccaaactcgccatatttgcagggaccaaaagcatattttag 42446528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 45320948 - 45320977
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  45320948 atatttgcagggactaaaatcatattttag 45320977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 46027417 - 46027474
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||  |||| || |||||||||||||||| ||||  |||||||||    
T  46027417 ttaccagggaccaaaattcaaactcgctatatttgcagggaccaaaagtatattttag 46027474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 46186440 - 46186411
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  46186440 atatttgcagggactaaaatcatattttag 46186411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 20757431 - 20757403
Alignment:
Q  111 atatttgcagggactaaaatcatatttta 139  Q
    |||||||||||||||||||||||||||||    
T  20757431 atatttgcagggactaaaatcatatttta 20757403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 44507808 - 44507856
Alignment:
Q  92 accaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||  |||| || |||||||||||||||| |||||||||||||||    
T  44507808 accaaaattcaaactcgctatatttgcagggaccaaaatcatattttag 44507856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 31848144 - 31848210
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctattttt 149  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| ||||    
T  31848144 ttaccagggaccaaaacccaaattcgctatatttgcagggactaaaaacatattttagcctaatttt 31848210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 32544774 - 32544830
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  32544774 ttaccaaggaccaaaacccaaattcgctatatttgcagggaccaaaatcatatttta 32544830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 17066484 - 17066427
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| || ||||||||||||||| ||||| ||||||||||    
T  17066484 ttaccagggaccaaaacccaaactcgctatatttgcagggattaaaagcatattttag 17066427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 24197103 - 24197168
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctatttt 148  Q
    |||||||| |||||||| ||||||| |||||||||||||||| |||| |||||||||| |||||||    
T  24197103 ttaccaggaaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttagcctatttt 24197168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 32197909 - 32197966
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  32197909 ttaccaaggaccaaaacccaaattcgctatatttgcagggaccaaaagcatattttag 32197966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 12385707 - 12385763
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    |||||||||||||||| ||||| || |||||||||||||||| ||||||||||||||    
T  12385707 ttaccagggaccaaaatccaaactcgctatatttgcagggaccaaaatcatatttta 12385763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 38742240 - 38742184
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    ||||| |||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  38742240 ttaccggggaccaaaacccaaactcgctatatttgcagggactaaaaacatatttta 38742184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 12933478 - 12933415
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctatt 146  Q
    ||||||||||||||||  |||| ||||||||||||||||||| |||| |||||||||| |||||    
T  12933478 ttaccagggaccaaaattcaaactcactatatttgcagggaccaaaagcatattttagcctatt 12933415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 5611507 - 5611564
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| |||||| |||||||||| || |||||||||||||||| |||||||||||||||    
T  5611507 ttacgagggacgaaaacccaaactcgctatatttgcagggaccaaaatcatattttag 5611564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 13419009 - 13418952
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||| |||||||||| | |||||||||||||| |||| ||||||||||    
T  13419009 ttaccagggaccaatacccaaattcgcaatatttgcagggaccaaaaacatattttag 13418952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 24195666 - 24195609
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||| ||||||||||| || |||||||||||||||| |||| ||||||||||    
T  24195666 ttaccagggagcaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 24195609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 41693704 - 41693647
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||| | |||||||||||||  |||| ||||||||||    
T  41693704 ttaccagggaccaaaacccaaattcgccatatttgcagggatcaaaaacatattttag 41693647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Original strand, 43869912 - 43869965
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatt 136  Q
    ||||||||||||||||||||||||  |||||||||||||||| |||| ||||||    
T  43869912 ttaccagggaccaaaacccaaattggctatatttgcagggaccaaaaccatatt 43869965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 31853607 - 31853550
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| ||||||||||| ||||| |||| |||||||||||||| |||| ||||||||||    
T  31853607 ttactagggaccaaaatccaaactcacaatatttgcagggaccaaaaacatattttag 31853550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 32196739 - 32196686
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||| |||||| | |||||||||||||||| |||| ||||||||||    
T  32196739 cagggaccaaaatccaaatacgctatatttgcagggaccaaaaacatattttag 32196686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 35212127 - 35212070
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| ||   |||||||||||||| |||| ||||||||||    
T  35212127 ttaccagggaccaaaacccaaactcgtcatatttgcagggaccaaaaacatattttag 35212070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 40576825 - 40576760
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctatttt 148  Q
    ||||||| |||||||| ||||||||   |||||||||||||| |||| |||||||||| |||||||    
T  40576825 ttaccagagaccaaaatccaaattcgtcatatttgcagggaccaaaagcatattttagcctatttt 40576760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 41694955 - 41695012
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| |||| || |||||||||||||||  |||| ||||||||||    
T  41694955 ttaccagggaccaaaactcaaactcgctatatttgcagggatgaaaaacatattttag 41695012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 11217071 - 11217127
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    ||||||||||||||||  |||| || |||||||||||||||| |||| |||||||||    
T  11217071 ttaccagggaccaaaattcaaactcgctatatttgcagggaccaaaagcatatttta 11217127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 45021825 - 45021865
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctatttttat 151  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  45021825 atatttgcagggactaaaaccatattttagcctatttttat 45021865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 554298 - 554247
Alignment:
Q  89 gggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||| || |||||||||||||||| || || |||||||||    
T  554298 gggaccaaaacccaaactcgctatatttgcagggaccaatattatattttag 554247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 145
Target Start/End: Original strand, 18022673 - 18022707
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctat 145  Q
    |||||||||||||||||||||||||||||| ||||    
T  18022673 atatttgcagggactaaaatcatattttagcctat 18022707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 25037809 - 25037755
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattt 137  Q
    ||||||||||||||||  |||| ||   |||||||||||||||||||||||||||    
T  25037809 ttaccagggaccaaaattcaaactcgtcatatttgcagggactaaaatcatattt 25037755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 28462628 - 28462686
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagt 141  Q
    |||||||||| ||||||||||||||   |||||||||| ||| |||| |||||||||||    
T  28462628 ttaccagggatcaaaacccaaattcgtcatatttgcagagaccaaaagcatattttagt 28462686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 31489942 - 31489992
Alignment:
Q  90 ggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||| ||  ||||||||||||||| |||| ||||||||||    
T  31489942 ggaccaaaacccaaactcgttatatttgcagggaccaaaaacatattttag 31489992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 10358032 - 10357995
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctatttt 148  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  10358032 atatttgcagggactaagatcatattttagcctatttt 10357995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 17854180 - 17854147
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtcta 144  Q
    ||||||||||||||||||| ||||||||||||||    
T  17854180 atatttgcagggactaaaaccatattttagtcta 17854147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 21223436 - 21223407
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  21223436 atatttgcagggactaaaatcatattttag 21223407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 30709613 - 30709642
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  30709613 atatttgcagggactaaaatcatattttag 30709642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 31310396 - 31310367
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  31310396 atatttgcagggactaaaatcatattttag 31310367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 32189107 - 32189078
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  32189107 atatttgcagggactaaaatcatattttag 32189078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 42255017 - 42254960
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| |||| || | |||||| ||||||| |||| ||||||||||    
T  42255017 ttaccagggaccaaaactcaaactcgccatatttacagggaccaaaagcatattttag 42254960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 5610215 - 5610159
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    ||||||| ||| |||||||||||||  ||||||||||||||  |||| |||||||||    
T  5610215 ttaccagagactaaaacccaaattcgttatatttgcagggatcaaaagcatatttta 5610159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 28911608 - 28911572
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattt 147  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  28911608 atatttgcagggactaaaaccatattttagcctattt 28911572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 31847045 - 31846989
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    |||||||| ||||||| |||||||   ||||||||||||||| |||| |||||||||    
T  31847045 ttaccaggaaccaaaatccaaattagatatatttgcagggaccaaaagcatatttta 31846989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 431 - 488
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  431 ttaccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttag 488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 28996893 - 28996836
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  28996893 ttaccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttag 28996836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 4183979 - 4184036
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  4183979 ttaccagggaccaaaacccaaacgcactatatttgcagggactaaaagcatattttag 4184036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 10718448 - 10718519
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctat-ttttatat 153  Q
    |||||||||||||||||||||| || |||||||||||||||| |||| |||||||||| |||| ||||||||    
T  10718448 ttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttagcctatattttatat 10718519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 34904509 - 34904563
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattt 137  Q
    |||||||| |||||||||||||||| ||||||||| |||||||||||||||||||    
T  34904509 ttaccaggaaccaaaacccaaattcgctatatttgaagggactaaaatcatattt 34904563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Complemental strand, 45516456 - 45516386
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctatttttatat 153  Q
    ||||||| ||||||||||||||||| |||||||| || ||||||||| ||||||||||||| ||| |||||    
T  45516456 ttaccagagaccaaaacccaaattcgctatatttacatggactaaaaacatattttagtctttttatatat 45516386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 1376994 - 1376929
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctatttt 148  Q
    |||||||||||||||| |||||||  |||||||||||||||| |||||||||||| || |||||||    
T  1376994 ttaccagggaccaaaatccaaattggctatatttgcagggaccaaaatcatatttaagcctatttt 1376929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 4182681 - 4182624
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||| |||||||| ||||||| |||| ||||||||||    
T  4182681 ttaccagggaccaaaacccaaattcgctatatttacagggaccaaaagcatattttag 4182624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 10717180 - 10717123
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| || |||||||||||||||| |||| ||||||||||    
T  10717180 ttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttag 10717123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 22272270 - 22272327
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||    
T  22272270 ttaccagggaccaaaacccaaattcgctatatttgcggggaccaaaagcatattttag 22272327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 38455506 - 38455447
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtc 142  Q
    |||| |||||||||||| ||||||||||||||||||| |||| |||| ||||||||||||    
T  38455506 ttactagggaccaaaactcaaattcactatatttgcaaggaccaaaaacatattttagtc 38455447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 38456730 - 38456792
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctat 145  Q
    |||||||||||||||||| |||||  |||||||||||||||| |||| |||||||||| ||||    
T  38456730 ttaccagggaccaaaacctaaatttgctatatttgcagggaccaaaagcatattttagcctat 38456792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 144
Target Start/End: Complemental strand, 3483688 - 3483631
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtcta 144  Q
    ||||||||||||| |||| || |||||||||||||||| |||| ||||||||||||||    
T  3483688 cagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttagtcta 3483631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 22534722 - 22534779
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| || |||||||||||||||  |||| ||||||||||    
T  22534722 ttaccagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttag 22534779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 28997993 - 28998050
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| ||||||||||||||||| || |||||||||||||||| |||| ||||||||||    
T  28997993 ttactagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 28998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 36588281 - 36588224
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| |||| || |||||||||||||||| |||| ||||||||||    
T  36588281 ttaccagggaccaaaacgcaaactcgctatatttgcagggaccaaaagcatattttag 36588224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 36589387 - 36589444
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||| ||||||||||| ||| || ||||||||||||| ||||||||||||||||||    
T  36589387 ttaccaaggaccaaaacctaaactcgctatatttgcaggaactaaaatcatattttag 36589444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 38658540 - 38658483
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||| ||||||||||| |||| | || ||||||||||    
T  38658540 ttaccagggaccaaaacccaaattcgctatatttgcatggaccagaagcatattttag 38658483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 41847184 - 41847237
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||| ||||||| |||||||||||| |||||||| ||||||||||    
T  41847184 cagggaccaaaactcaaattcgctatatttgcagagactaaaagcatattttag 41847237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 45517962 - 45518022
Alignment:
Q  85 accagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctat 145  Q
    |||||||||||||||||||| || ||||| |||||||||| |||| |||||||||| ||||    
T  45517962 accagggaccaaaacccaaactcgctatacttgcagggaccaaaagcatattttagcctat 45518022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 1385555 - 1385609
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattt 137  Q
    |||||||||||||||| |||||||  |||||||||||||||| |||| |||||||    
T  1385555 ttaccagggaccaaaatccaaattggctatatttgcagggaccaaaaccatattt 1385609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 9465320 - 9465365
Alignment:
Q  95 aaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||||    
T  9465320 aaaacccaaattcactatatttgcaggaactaaaaacatactttag 9465365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 22271002 - 22270945
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| |||| |||||||| |||||||||||||||  |||| ||||||||||    
T  22271002 ttaccagggactaaaatccaaattcgctatatttgcagggatcaaaagcatattttag 22270945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 22533376 - 22533319
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| || |||||| | ||||||| |||| ||||||||||    
T  22533376 ttaccagggaccaaaacccaaactcgctatatatacagggaccaaaagcatattttag 22533319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 41846706 - 41846650
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    ||||||| |||||||| ||||| | ||||||||| |||||||||||| |||||||||    
T  41846706 ttaccagagaccaaaatccaaacttactatatttacagggactaaaagcatatttta 41846650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 146
Target Start/End: Original strand, 28399004 - 28399039
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctatt 146  Q
    |||||||||||||||||||||||||||||| |||||    
T  28399004 atatttgcagggactaaaatcatattttagcctatt 28399039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 10292864 - 10292818
Alignment:
Q  94 caaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||| ||||||| ||||||||| |||||| |||||||||||||||    
T  10292864 caaaacgcaaattcgctatatttgaagggaccaaaatcatattttag 10292818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 24187866 - 24187904
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattttt 149  Q
    |||||||||||||||||||||||||||||| || |||||    
T  24187866 atatttgcagggactaaaatcatattttagccttttttt 24187904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 297119 - 297164
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaa 128  Q
    ||||||| || ||||| |||||||| ||||||||||||||||||||    
T  297119 ttaccagagatcaaaatccaaattcgctatatttgcagggactaaa 297164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 1420446 - 1420499
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||| | ||||| || |||||||||||||||| |||| ||||||||||    
T  1420446 cagggaccaatatccaaactcgctatatttgcagggaccaaaaacatattttag 1420499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 14197884 - 14197827
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| ||||||||||| ||||| || | |||||||||||||| |||| ||||||||||    
T  14197884 ttactagggaccaaaatccaaactcgccatatttgcagggaccaaaaacatattttag 14197827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 21509887 - 21509916
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  21509887 atatttgcagggactaaaatcatattttag 21509916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 30124223 - 30124280
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| |||| |  || ||||||||||||| |||| ||||||||||    
T  30124223 ttaccagggaccaaaactcaaacttgctttatttgcagggaccaaaagcatattttag 30124280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 33526381 - 33526410
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  33526381 atatttgcagggactaaaatcatattttag 33526410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Complemental strand, 33636353 - 33636316
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctatttt 148  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  33636353 atatttgcagggactaaaaccatattttagcctatttt 33636316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 38930633 - 38930662
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  38930633 atatttgcagggactaaaatcatattttag 38930662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 39439983 - 39439926
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||| ||||||| |||| |  | |||||||||||||| |||||||||||||||    
T  39439983 ttaccagggtccaaaactcaaactagccatatttgcagggaccaaaatcatattttag 39439926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 5357454 - 5357418
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattt 147  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  5357454 atatttgcagggaccaaaatcatattttagcctattt 5357418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 19494150 - 19494114
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattt 147  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  19494150 atatttgcagggactaaaaccatattttagcctattt 19494114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 33652221 - 33652193
Alignment:
Q  111 atatttgcagggactaaaatcatatttta 139  Q
    |||||||||||||||||||||||||||||    
T  33652221 atatttgcagggactaaaatcatatttta 33652193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 18810591 - 18810534
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  18810591 ttaccagggaccaaaacccaaactcactatatttgcagggaccaaaatcatattttag 18810534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 20897497 - 20897554
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  20897497 ttaccagggaccaaaacccaaattcactatatttgcagggaccaaaaccatattttag 20897554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 17516217 - 17516153
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctatttttat 151  Q
    |||||||||||||||||| |||| |||||||||||||| |||| ||||||||||||| |||||||    
T  17516217 cagggaccaaaacccaaactcaccatatttgcagggaccaaaaacatattttagtctttttttat 17516153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 20391273 - 20391217
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  20391273 ttacgagggaccaaaacccaaattcactatatttgcagggaccaaaagcatatttta 20391217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 16995510 - 16995453
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||| ||||||||||    
T  16995510 ttaccagggaccaaaacccaaattctttatatttgcagggaccaaaaacatattttag 16995453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 21953265 - 21953208
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||| ||||||||||    
T  21953265 ttaccagggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 21953208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 21165305 - 21165248
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| |||| || |||||||||||||||| |||| ||||||||||    
T  21165305 ttaccagggaccaaaacacaaactcgctatatttgcagggaccaaaagcatattttag 21165248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 34998141 - 34998198
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| || |||||||||||||||  |||| ||||||||||    
T  34998141 ttaccagggaccaaaacccaaactcgctatatttgcagggatcaaaagcatattttag 34998198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 34995173 - 34995111
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctat 145  Q
    |||||||| |||||||| ||||||| |||||||||||||||  |||| |||||||||| ||||    
T  34995173 ttaccaggaaccaaaactcaaattcgctatatttgcagggatcaaaagcatattttagcctat 34995111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 1972459 - 1972402
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||| ||| ||||||||||||| || ||||||||||||| |||| ||||||||||    
T  1972459 ttaccagagactaaaacccaaattcgctttatttgcagggaccaaaaacatattttag 1972402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 3276426 - 3276369
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| |||||| |||| |||||||| |||||||||||||||| |||| ||||||||||    
T  3276426 ttactagggactaaaatccaaattcgctatatttgcagggaccaaaaacatattttag 3276369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 17000281 - 17000334
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||| |||||| |||||||||||| ||||  |||||||||    
T  17000281 cagggaccaaaacccaaactcactacatttgcagggaccaaaagtatattttag 17000334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 17517309 - 17517366
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| |||| || | |||||||||||||| |||| ||||||||||    
T  17517309 ttaccagggaccaaaactcaaactcgccatatttgcagggaccaaaaacatattttag 17517366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 20393268 - 20393325
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||  |||||||||||| |||||||||||||||  |||| ||||||||||    
T  20393268 ttaccagggactgaaacccaaattcgctatatttgcagggatcaaaagcatattttag 20393325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 543693 - 543741
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctatttttatatagagag 159  Q
    |||||||||||||||||||||||||||||| ||| |||| | |||||||    
T  543693 atatttgcagggactaaaatcatattttagcctacttttttttagagag 543741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 20896005 - 20895957
Alignment:
Q  95 aaaacccaaattcactatatttgcagggactaaaatcatattttagtct 143  Q
    ||||| ||||||| |||||||||||||||| |||| |||||||||||||    
T  20896005 aaaactcaaattcgctatatttgcagggaccaaaaacatattttagtct 20895957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 25439696 - 25439648
Alignment:
Q  94 caaaacccaaattcactatatttgcagggactaaaatcatattttagtc 142  Q
    ||||||||||| ||  |||||||||||||||||||| ||||||||||||    
T  25439696 caaaacccaaaatcgttatatttgcagggactaaaaacatattttagtc 25439648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 1170498 - 1170441
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||| |||||||| |||||||   | ||||| |||||||||||||||||||||||    
T  1170498 ttaccagagaccaaaatccaaatttgttttatttacagggactaaaatcatattttag 1170441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 1974156 - 1974209
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||| ||||||| ||||||||||| |||  |||| ||||||||||    
T  1974156 cagggaccaaaactcaaattcgctatatttgcaaggatcaaaaacatattttag 1974209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 11448568 - 11448539
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  11448568 atatttgcagggactaaaatcatattttag 11448539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 26421843 - 26421900
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| ||||| ||||||| |||||||||||| ||| |||| ||| ||||||    
T  26421843 ttaccagggactaaaactcaaattcgctatatttgcagagaccaaaaacatgttttag 26421900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 29291414 - 29291361
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||| || | ||||||||| |||| |||| ||||||||||    
T  29291414 cagggaccaaaacccaaactcgccatatttgcaaggaccaaaagcatattttag 29291361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 30929013 - 30929042
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  30929013 atatttgcagggactaaaatcatattttag 30929042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 31398510 - 31398539
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  31398510 atatttgcagggactaaaatcatattttag 31398539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 318066 - 318106
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctatttttat 151  Q
    ||||||||||||| ||||| |||||||||| ||||||||||    
T  318066 atatttgcagggattaaaaccatattttagcctatttttat 318106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 30907 - 30970
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctatt 146  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||| |||||    
T  30907 ttaccagggaccaaaacccaaactcactatatttgcagggaccaaaaccatattttagcctatt 30970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 29788 - 29731
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||| ||||| ||  | ||||||||||||| |||| ||||||||||    
T  29788 ttaccagggaccaaaatccaaactcgttttatttgcagggaccaaaagcatattttag 29731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 8e-18; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 27264216 - 27264278
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctat 145  Q
    |||||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||||    
T  27264216 ttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaatcatattttagcctat 27264278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 35721160 - 35721098
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctat 145  Q
    |||||||||||||||||||||||||  ||||||||||||||| |||| |||||||||| ||||    
T  35721160 ttaccagggaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttagcctat 35721098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 9774888 - 9774945
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| || |||||||||||||||| |||| ||||||||||    
T  9774888 ttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatattttag 9774945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 20722531 - 20722474
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||| || |||||||    
T  20722531 ttaccagggaccaaaacccaaattcgctatatttgcagggaccaaaagcacattttag 20722474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 34934747 - 34934804
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  34934747 ttaccaaggaccaaaacccaaattcgctatatttgcagggacaaaaagcatattttag 34934804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 37395692 - 37395635
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||| | |||||||||||||||| |||| ||||||||||    
T  37395692 ttaccagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttag 37395635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 47038925 - 47038868
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| |  ||||||||||||||||||||| ||||||||||    
T  47038925 ttaccagggaccaaaacccaaactagctatatttgcagggactaaaaacatattttag 47038868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 17976820 - 17976766
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattt 137  Q
    ||||||||||||||||||||||||| ||||||||||||| || |||| |||||||    
T  17976820 ttaccagggaccaaaacccaaattcgctatatttgcaggaaccaaaaccatattt 17976766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 17977559 - 17977613
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattt 137  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||| |||||||    
T  17977559 ttaccaaggaccaaaacccaaattcgctatatttgcagggaccaaaaccatattt 17977613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 27816720 - 27816774
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattt 137  Q
    ||||||||||||||||||||||||  |||||||||||||||| |||| |||||||    
T  27816720 ttaccagggaccaaaacccaaattggctatatttgcagggaccaaaaccatattt 27816774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 11711254 - 11711310
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||| ||||||||||    
T  11711254 ttaccagggaccaaa-cccaaattcgctatatttgcagggaccaaaaacatattttag 11711310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 20723688 - 20723745
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| ||||| ||||||| |||||||||||||||| |||| ||||||||||    
T  20723688 ttaccagggactaaaactcaaattcgctatatttgcagggaccaaaaacatattttag 20723745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 26863919 - 26863862
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| ||||||| |||||||||||||||| |||| || |||||||    
T  26863919 ttaccagggaccaaaactcaaattcgctatatttgcagggaccaaaaacacattttag 26863862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 27262967 - 27262910
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| |||| || |||||||||||||||| |||| ||||||||||    
T  27262967 ttaccagggaccaaaacacaaactcgctatatttgcagggaccaaaaacatattttag 27262910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 35911888 - 35911945
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||| ||||||||| |||||||| |||||||||||||||| |||| ||||||||||    
T  35911888 ttaccaaggaccaaaatccaaattcgctatatttgcagggaccaaaagcatattttag 35911945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 37396840 - 37396897
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||| |||||||||| ||||||| |||||||||||||||| |||| ||||||||||    
T  37396840 ttaccaaggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttag 37396897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 46075050 - 46075107
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| || |||||||||||||||  |||| ||||||||||    
T  46075050 ttaccagggaccaaaacccaaactcgctatatttgcagggatcaaaaacatattttag 46075107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 46073944 - 46073880
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctattt 147  Q
    ||||||||||| ||||||||||||  |||||||||||||||  |||| |||||||||| ||||||    
T  46073944 ttaccagggactaaaacccaaatttgctatatttgcagggatcaaaagcatattttagcctattt 46073880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 27815500 - 27815446
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattt 137  Q
    ||||||||||||||||||||||||  |||||||||||||||| | || |||||||    
T  27815500 ttaccagggaccaaaacccaaattggctatatttgcagggaccagaaccatattt 27815446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 23469969 - 23470026
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||| ||||||| ||| || |||||||||||||||| |||| ||||||||||    
T  23469969 ttaccagggatcaaaaccgaaactcgctatatttgcagggaccaaaaacatattttag 23470026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 24422574 - 24422517
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||| ||||| |||| |||||||||||| ||||||| |||| ||||||||||    
T  24422574 ttaccagggatcaaaatccaacttcactatatttacagggaccaaaagcatattttag 24422517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 24609978 - 24609921
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| ||||||||||||||||| || | |||||||||||||| |||| ||||||||||    
T  24609978 ttactagggaccaaaacccaaactcgccatatttgcagggaccaaaaacatattttag 24609921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 30724015 - 30724072
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| ||||||   ||||||||||||||| |||| ||||||||||    
T  30724015 ttaccagggaccaaaactcaaatttgttatatttgcagggacgaaaagcatattttag 30724072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 39163024 - 39163081
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||  || | |||||||||||||| |||| ||||||||||    
T  39163024 ttaccagggaccaaaacccaacctcgccatatttgcagggaccaaaagcatattttag 39163081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 48588965 - 48589018
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||| |||| |||||| ||||||| |||| ||||||||||    
T  48588965 cagggaccaaaacccaaactcaccatatttacagggaccaaaaacatattttag 48589018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 9774096 - 9774040
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    ||||||||||||||||| |||| ||  ||||||||||||||| |||| |||||||||    
T  9774096 ttaccagggaccaaaactcaaactcgttatatttgcagggaccaaaaacatatttta 9774040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 15335264 - 15335300
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattt 147  Q
    ||||||||||||||||||||||||||||| |||||||    
T  15335264 atatttgcagggactaaaatcatattttaatctattt 15335300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 146
Target Start/End: Original strand, 1811204 - 1811239
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctatt 146  Q
    |||||||||||||||||||||||||||||| |||||    
T  1811204 atatttgcagggactaaaatcatattttagcctatt 1811239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 140
Target Start/End: Original strand, 45979506 - 45979553
Alignment:
Q  93 ccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||| ||||||| |||||||||||||||| |||| ||||||||||    
T  45979506 ccaaaactcaaattcgctatatttgcagggaccaaaaacatattttag 45979553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 51240174 - 51240119
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtc 142  Q
    |||||| ||||| |||||||| |||||||||||| ||| |||| ||||||||||||    
T  51240174 cagggatcaaaatccaaattcgctatatttgcagagaccaaaaacatattttagtc 51240119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 140
Target Start/End: Original strand, 2604138 - 2604184
Alignment:
Q  94 caaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| || | ||||||||||||||||||| ||||||||||    
T  2604138 caaaacccaaactccccatatttgcagggactaaaaacatattttag 2604184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 35910711 - 35910650
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctat 145  Q
    |||||||||||||||||| ||||   ||||||||||| |||| ||||||||||||||| ||||    
T  35910711 ttaccagggaccaaaaccgaaatatgctatatttgca-ggaccaaaatcatattttagcctat 35910650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 3679955 - 3679984
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  3679955 atatttgcagggactaaaatcatattttag 3679984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 17984670 - 17984699
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  17984670 atatttgcagggactaaaatcatattttag 17984699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 24427369 - 24427426
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| ||||| |||| || ||||||||| |||||| |||| ||||||||||    
T  24427369 ttaccagggactaaaactcaaactcgctatatttgtagggaccaaaaacatattttag 24427426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 26324916 - 26324953
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctatttt 148  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  26324916 atatttgcatggactaaaatcatattttagcctatttt 26324953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 26865184 - 26865241
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| |||| |||||||| |||||||||||| ||| ||||  |||||||||    
T  26865184 ttaccagggactaaaatccaaattcgctatatttgcagagaccaaaaatatattttag 26865241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 44641401 - 44641430
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  44641401 atatttgcagggactaaaatcatattttag 44641430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 48955745 - 48955716
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  48955745 atatttgcagggactaaaatcatattttag 48955716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 50429178 - 50429207
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  50429178 atatttgcagggactaaaatcatattttag 50429207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 37545894 - 37545934
Alignment:
Q  118 cagggactaaaatcatattttagtctatttttatatagaga 158  Q
    |||||||||||| |||||||||| |||||||||||| ||||    
T  37545894 cagggactaaaaccatattttagcctatttttatatcgaga 37545934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 41358632 - 41358668
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattt 147  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  41358632 atatttgcagggactaaaaccatattttagcctattt 41358668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 50164461 - 50164405
Alignment:
Q  84 taccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||| |||||||||| |||| || | |||||||||||||| |||| ||||||||||    
T  50164461 taccaaggaccaaaactcaaactcgccatatttgcagggaccaaaagcatattttag 50164405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 3e-17; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 35054713 - 35054656
Alignment:
Q  91 gaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctatttt 148  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||    
T  35054713 gaccaaaacccaaattcgctatatttgcagggactaaaatcatattttaacctatttt 35054656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 17281630 - 17281573
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||    
T  17281630 ttaccagggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttag 17281573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 17370132 - 17370075
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||    
T  17370132 ttaccagggaccaaaatccaaattcgctatatttgcagggactaaaagcacattttag 17370075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 41933870 - 41933810
Alignment:
Q  90 ggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctattttta 150  Q
    ||||||||||||||| || |||||||||||| ||| ||||||||||||||| |||||||||    
T  41933870 ggaccaaaacccaaactcgctatatttgcagagaccaaaatcatattttagcctattttta 41933810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 22204114 - 22204057
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| |||||||||| || |||||||||||||||| |||| ||||||||||    
T  22204114 ttaccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 22204057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 42359346 - 42359403
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||| ||||| || |||||||||||||||| |||| ||||||||||    
T  42359346 ttaccagggaccaaaatccaaactcgctatatttgcagggaccaaaaacatattttag 42359403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 44705358 - 44705301
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| ||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||    
T  44705358 ttactaggaaccaaaacccaaattcactatatttgcagagaccaaaaacatattttag 44705301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 45618344 - 45618287
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| || |||||||||||||||| |||| ||||| ||||    
T  45618344 ttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaagcatatattag 45618287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 45619731 - 45619788
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||| ||||||| ||| || ||||||||||||||||||||| ||||||||||    
T  45619731 ttaccagggaacaaaacctaaactcgctatatttgcagggactaaaaacatattttag 45619788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 16574368 - 16574424
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    |||| ||||||||||||  |||||| ||||||||||||||||||||| |||||||||    
T  16574368 ttacaagggaccaaaacttaaattcgctatatttgcagggactaaaaacatatttta 16574424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 83 - 139
Target Start/End: Original strand, 17371845 - 17371901
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    |||||||||||||||||||||||||  ||||||||||||||  |||| |||||||||    
T  17371845 ttaccagggaccaaaacccaaattcgttatatttgcagggatcaaaagcatatttta 17371901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 151
Target Start/End: Complemental strand, 40198633 - 40198568
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctatttttat 151  Q
    |||||||||||||||||||||| || ||||||||||||||   |||| |||||||||| || |||||||    
T  40198633 ttaccagggaccaaaacccaaactcgctatatttgcaggg---aaaagcatattttagcctttttttat 40198568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 54121700 - 54121762
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctat 145  Q
    |||||||||||||||||||||| || |  ||||||||||||  ||||||||||||||| ||||    
T  54121700 ttaccagggaccaaaacccaaactcgccgtatttgcagggagcaaaatcatattttagcctat 54121762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 3879145 - 3879088
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||| ||||| || |||||||||||||||  |||| ||||||||||    
T  3879145 ttaccagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttag 3879088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 3880496 - 3880553
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| ||||||||||||||||| || ||||||||||||| || |||| ||||||||||    
T  3880496 ttactagggaccaaaacccaaactcgctatatttgcaggaaccaaaaacatattttag 3880553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 19674473 - 19674416
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| |||| || ||||||||||| |||| |||| ||||||||||    
T  19674473 ttaccagggaccaaaactcaaactcgctatatttgcaaggaccaaaagcatattttag 19674416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 22205222 - 22205279
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||  | | || ||||||||||||||||||||| ||||||||||    
T  22205222 ttaccagggaccaaaacttacactctctatatttgcagggactaaaagcatattttag 22205279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 33137228 - 33137285
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| |||||||||| || |||||||||||||||  |||| ||||||||||    
T  33137228 ttaccagggactaaaacccaaactcgctatatttgcagggatcaaaaacatattttag 33137285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 9445980 - 9445948
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtct 143  Q
    |||||||||||||||||||||||||||||||||    
T  9445980 atatttgcagggactaaaatcatattttagtct 9445948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 32699319 - 32699371
Alignment:
Q  88 agggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| || |||||||| ||||||| |||| ||||||||||    
T  32699319 agggaccaaaacccaaactcgctatatttacagggaccaaaaacatattttag 32699371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 143
Target Start/End: Complemental strand, 47359573 - 47359513
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtct 143  Q
    ||||||||||| ||||| ||||||| ||||||||||| | || |||| |||||||||||||    
T  47359573 ttaccagggactaaaactcaaattcgctatatttgcaagaacgaaaaacatattttagtct 47359513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 18205492 - 18205531
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattttta 150  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  18205492 atatttgcagggactaaaaccatattttagtccattttta 18205531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 17326734 - 17326788
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattt 137  Q
    |||| |||||||||||||||||| | ||||||||| |||||| |||| |||||||    
T  17326734 ttactagggaccaaaacccaaatgccctatatttggagggaccaaaaccatattt 17326788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 20292017 - 20291979
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattttt 149  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  20292017 atatttgcagggaccaaaatcatattttagcctattttt 20291979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 42358091 - 42358025
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctattttt 149  Q
    |||||||||| |||||| |||| |  |||||||||||||||| |||| |||||||||| || |||||    
T  42358091 ttaccagggatcaaaactcaaacttcctatatttgcagggaccaaaaacatattttagccttttttt 42358025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 4279304 - 4279333
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  4279304 atatttgcagggactaaaatcatattttag 4279333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 6827843 - 6827872
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  6827843 atatttgcagggactaaaatcatattttag 6827872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 11285534 - 11285505
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  11285534 atatttgcagggactaaaatcatattttag 11285505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 16916118 - 16916065
Alignment:
Q  91 gaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtcta 144  Q
    ||||||||| |||| |||| |||||||||||||| ||||  |||||||||||||    
T  16916118 gaccaaaactcaaactcaccatatttgcagggaccaaaagtatattttagtcta 16916065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 19675624 - 19675677
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||| ||||| ||  ||||||||||||||| |||| ||||||||||    
T  19675624 cagggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttag 19675677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 29059772 - 29059715
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||  ||| |||||||  ||||||||||||||| |||| ||||||||||    
T  29059772 ttaccagggaccggaactcaaattcgttatatttgcagggacgaaaaacatattttag 29059715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 29060882 - 29060939
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||| |||||||||  |||| || ||||||||||||||| ||||| ||||||||||    
T  29060882 ttaccaaggaccaaaattcaaactcgctatatttgcagggattaaaaacatattttag 29060939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 32698046 - 32698001
Alignment:
Q  95 aaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||| |||||| |||||||||||||||  |||||||||||||||    
T  32698046 aaaacctaaattcgctatatttgcagggatcaaaatcatattttag 32698001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 38166545 - 38166488
Alignment:
Q  92 accaaaacccaaattcactatatttgcagggactaaaatcatattttagtctattttt 149  Q
    ||||||| ||||| || ||||||||||||||| ||||| |||||||||| ||| ||||    
T  38166545 accaaaatccaaactcgctatatttgcagggattaaaaacatattttagcctagtttt 38166488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 123565 - 123529
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattt 147  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  123565 atatttgcagggactaaaaccatattttagcctattt 123529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 13064434 - 13064474
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctatttttat 151  Q
    ||||||||||||||||||| |||||||||| || |||||||    
T  13064434 atatttgcagggactaaaaccatattttagcctttttttat 13064474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 16573436 - 16573380
Alignment:
Q  84 taccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||| ||||||||||||||||| | ||||||| || ||| |||| ||||||||||    
T  16573436 taccagagaccaaaacccaaattcgccatatttgtagagaccaaaagcatattttag 16573380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 30564864 - 30564832
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtct 143  Q
    ||||||||||||||||||| |||||||||||||    
T  30564864 atatttgcagggactaaaaccatattttagtct 30564832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 41935078 - 41935126
Alignment:
Q  91 gaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    |||||||||||||| ||  ||||||||||||||| |||| |||||||||    
T  41935078 gaccaaaacccaaactcgttatatttgcagggaccaaaaacatatttta 41935126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 43368496 - 43368464
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtct 143  Q
    ||||||||||||||||||| |||||||||||||    
T  43368496 atatttgcagggactaaaaccatattttagtct 43368464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 52441794 - 52441758
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattt 147  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  52441794 atatttgcagggactaaaaccatattttagcctattt 52441758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 25977929 - 25977872
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||    
T  25977929 ttaccagggaccaaaacccaaactcactatatttgcagggaccaaaaacatattttag 25977872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 25979251 - 25979308
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  25979251 ttaccagggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttag 25979308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 4040216 - 4040277
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtcta 144  Q
    |||||||||| ||||||| |||||| |||||||||||||||| |||||||||||||| ||||    
T  4040216 ttaccagggagcaaaacctaaattctctatatttgcagggaccaaaatcatattttaatcta 4040277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 1777528 - 1777471
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| |||| || |||||||||||||||| |||| ||||||||||    
T  1777528 ttaccagggaccaaaactcaaactcgctatatttgcagggaccaaaaacatattttag 1777471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 2412428 - 2412485
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| |||||||||| || |||||||||||||||| |||| ||||||||||    
T  2412428 ttaccagggactaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 2412485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 11087108 - 11087051
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||| ||||||||| ||||| || ||||||||||||||| ||||||||||||||||    
T  11087108 ttaccaaggaccaaaagccaaactcgctatatttgcagggattaaaatcatattttag 11087051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 149
Target Start/End: Complemental strand, 8809656 - 8809589
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgc-agggactaaaatcatattttagtctattttt 149  Q
    |||||||||||||||||||||||||  ||||||||| |||||| |||| |||||||||| || |||||    
T  8809656 ttaccagggaccaaaacccaaattcgttatatttgcaagggaccaaaaacatattttagccttttttt 8809589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 20245305 - 20245372
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcaggga-ctaaaatcatattttagtctattttt 149  Q
    ||||||||||| ||||||||||||| ||||||||||||| | | |||| |||||||||| ||||||||    
T  20245305 ttaccagggactaaaacccaaattcgctatatttgcaggaatcaaaaaccatattttagcctattttt 20245372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 23861811 - 23861749
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctat 145  Q
    |||||||||||||||| ||||| || | |||||||||||||| |||| |||||||||| ||||    
T  23861811 ttaccagggaccaaaatccaaactctccatatttgcagggaccaaaaacatattttagcctat 23861749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 36837778 - 36837844
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctattttt 149  Q
    |||||||||||||||||||||| || |||||||||||| ||| ||||  ||||||||  ||||||||    
T  36837778 ttaccagggaccaaaacccaaactcgctatatttgcagagaccaaaaatatattttaacctattttt 36837844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 1778790 - 1778847
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||| ||||||||||||||| || ||||||||||||| || |||| ||||||||||    
T  1778790 ttaccaaggaccaaaacccaaagtcgctatatttgcaggaaccaaaagcatattttag 1778847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 2411321 - 2411264
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||  | | || ||||||||||||||||||||| ||||||||||    
T  2411321 ttaccagggaccaaaacttacactctctatatttgcagggactaaaagcatattttag 2411264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 11088680 - 11088737
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||| |||||||| ||||||| ||||||||||| |||| |||| ||||||||||    
T  11088680 ttaccaggaaccaaaactcaaattcgctatatttgcatggacgaaaaacatattttag 11088737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 25283272 - 25283329
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||| |||||| ||||||| |||||||||||| ||| |||| ||||||||||    
T  25283272 ttaccagggatcaaaactcaaattcgctatatttgcagtgaccaaaaacatattttag 25283329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 30843703 - 30843646
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| ||  ||||||||||| || ||||| ||||||||||    
T  30843703 ttaccagggaccaaaacccaaactcgttatatttgcagtgattaaaagcatattttag 30843646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 43824222 - 43824166
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    |||| |||||||||||| ||||||  |||||||||||||||| |||| |||||||||    
T  43824222 ttactagggaccaaaactcaaatttgctatatttgcagggacgaaaaacatatttta 43824166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 36622553 - 36622592
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattttta 150  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  36622553 atatttgcagggactaaaaccatattttagtcttttttta 36622592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 43788889 - 43788850
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattttta 150  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  43788889 atatttgcagggactaaaaccatattttagcctattttta 43788850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 8810703 - 8810761
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagt 141  Q
    ||||||||||  |||| |||||||| |||||||||||| ||| |||| |||||||||||    
T  8810703 ttaccagggattaaaatccaaattcgctatatttgcagagaccaaaaacatattttagt 8810761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 11788385 - 11788423
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattttt 149  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  11788385 atatttgcagggactaaaaccatattttagcctattttt 11788423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 4038901 - 4038844
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||| ||||||| ||||| | ||||||||| ||||||  |||||||||||||||    
T  4038901 ttaccaggtaccaaaatccaaacttactatatttacagggatcaaaatcatattttag 4038844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 7814706 - 7814735
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  7814706 atatttgcagggactaaaatcatattttag 7814735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 12835356 - 12835327
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  12835356 atatttgcagggactaaaatcatattttag 12835327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 19604919 - 19604976
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||||   | |||||| ||||||| |||| ||||||||||    
T  19604919 ttaccagggaccaaaacccaaatgagccatatttacagggaccaaaaacatattttag 19604976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 23989869 - 23989840
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  23989869 atatttgcagggactaaaatcatattttag 23989840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 24748270 - 24748214
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| | ||||| |||||||||| |||||||||| || |||||||    
T  24748270 ttaccagggaccaaaactc-aattcgctatatttgctgggactaaaagcacattttag 24748214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 29794321 - 29794373
Alignment:
Q  87 cagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| |||||||| ||||||| |||||||||||||||| |||| ||||||||||    
T  29794321 caggaaccaaaactcaaattcgctatatttgcagggaccaaaa-catattttag 29794373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 29865252 - 29865223
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  29865252 atatttgcagggactaaaatcatattttag 29865223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 41693972 - 41694001
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  41693972 atatttgcagggactaaaatcatattttag 41694001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 44985652 - 44985619
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtcta 144  Q
    ||||||||||||||||||| ||||||||||||||    
T  44985652 atatttgcagggactaaaaccatattttagtcta 44985619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 10671910 - 10671946
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctattt 147  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  10671910 atatttgcagggactaaaaccatattttagcctattt 10671946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 17912480 - 17912452
Alignment:
Q  111 atatttgcagggactaaaatcatatttta 139  Q
    |||||||||||||||||||||||||||||    
T  17912480 atatttgcagggactaaaatcatatttta 17912452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 11522 - 11579
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||| | |||||||||||||||| |||| ||||||||||    
T  11522 ttaccagggaccaaaacccaaatacgctatatttgcagggaccaaaaacatattttag 11579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 10374 - 10317
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||| |||||||||| ||||||| |||||||||||||||| |||| ||||||||||    
T  10374 ttaccaaggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttag 10317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 345897 - 345954
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| |||||||||||||||||||| |||||||||||||||| |||| ||||||||||    
T  345897 ttactagggaccaaaacccaaattcgctatatttgcagggaccaaaaacatattttag 345954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 344996 - 344942
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattt 137  Q
    |||||||||||||||||||||| || | |||||||||||||| ||||||||||||    
T  344996 ttaccagggaccaaaacccaaactcgccatatttgcagggaccaaaatcatattt 344942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 374394 - 374337
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| ||||||||||||||||| || |||||||||||||||  |||||||||||||||    
T  374394 ttacaagggaccaaaacccaaactcgctatatttgcagggatcaaaatcatattttag 374337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 376381 - 376426
Alignment:
Q  95 aaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||| || |||||||||||||||| |||| ||||||||||    
T  376381 aaaacccaaactcgctatatttgcagggaccaaaagcatattttag 376426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 119652 - 119595
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||| ||||||| |||||||||||||||| |||| ||||||||||    
T  119652 ttaccagggaccaaaactcaaattcgctatatttgcagggaccaaaagcatattttag 119595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 120985 - 121042
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| ||  ||||||||||||||| |||| ||||||||||    
T  120985 ttaccagggaccaaaacccaaactcgttatatttgcagggaccaaaagcatattttag 121042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 3936637 - 3936580
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| || |||||||||||||||| |||| ||||||||||    
T  3936637 ttaccagggaccaaaacccaaactcgctatatttgcagggaccaaaaacatattttag 3936580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 4565452 - 4565395
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||| ||||||||||    
T  4565452 ttaccagggaccaaaacccaaactcgctatatttgtagggactaaaaacatattttag 4565395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 27571129 - 27571186
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||| ||||||||||| || |||||||||||||||| |||||||||||||||    
T  27571129 ttaccagggatcaaaacccaaactcgctatatttgcagggaccaaaatcatattttag 27571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 3205102 - 3205164
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctat 145  Q
    |||||||||||||||||||||| |||  |||||||||||||  |||| |||||||||||||||    
T  3205102 ttaccagggaccaaaacccaaactcatcatatttgcagggatcaaaagcatattttagtctat 3205164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 3938060 - 3938122
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctat 145  Q
    |||||||||||||||||| ||| |  ||||||||||||||||||||| |||||||||| ||||    
T  3938060 ttaccagggaccaaaacctaaacttgctatatttgcagggactaaaagcatattttagcctat 3938122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 3954111 - 3954054
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||||||||||||  |||||||||| |||| |||| ||||||||||    
T  3954111 ttaccagggaccaaaacccaaattcgatatatttgcaaggaccaaaaacatattttag 3954054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 27098364 - 27098425
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtcta 144  Q
    |||||||||| ||||||||||||| | || |||| |||||||||||| ||||||||||||||    
T  27098364 ttaccagggatcaaaacccaaatttattaaatttacagggactaaaagcatattttagtcta 27098425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 31540555 - 31540498
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||| ||||||||||||||||  ||||||||||||||| |||| ||||||||||    
T  31540555 ttaccaggtaccaaaacccaaattcgttatatttgcagggaccaaaaacatattttag 31540498  T

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Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 4777699 - 4777645
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattt 137  Q
    |||||||||||||||| ||||| | |||||||||||| ||||||||| |||||||    
T  4777699 ttaccagggaccaaaatccaaacttactatatttgcaaggactaaaagcatattt 4777645  T

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Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 34911828 - 34911885
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| ||||| ||||| ||||| || |||||||||||||||| |||||||||||||||    
T  34911828 ttactagggatcaaaatccaaactcgctatatttgcagggaccaaaatcatattttag 34911885  T

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Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 15599818 - 15599758
Alignment:
Q  89 gggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagtctattttt 149  Q
    ||||||||||||||||||| | ||||||| |||||| |||| |||||||||| ||| ||||    
T  15599818 gggaccaaaacccaaattcgccatatttgtagggaccaaaagcatattttagcctaatttt 15599758  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 142
Target Start/End: Original strand, 16038709 - 16038740
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtc 142  Q
    ||||||||||||||||||||||||||||||||    
T  16038709 atatttgcagggactaaaatcatattttagtc 16038740  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 140
Target Start/End: Complemental strand, 27570109 - 27570058
Alignment:
Q  89 gggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||| ||||||||||| || ||||||||||| |||| |||||||||||||||    
T  27570109 gggaacaaaacccaaactcgctatatttgcaaggaccaaaatcatattttag 27570058  T

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Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 25254131 - 25254189
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagt 141  Q
    |||||||||| |||||| |||| ||  ||||||||||||||| |||| |||||||||||    
T  25254131 ttaccagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttagt 25254189  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 141
Target Start/End: Original strand, 25317921 - 25317979
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttagt 141  Q
    |||||||||| |||||| |||| ||  ||||||||||||||| |||| |||||||||||    
T  25317921 ttaccagggatcaaaactcaaactctatatatttgcagggaccaaaagcatattttagt 25317979  T

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Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 29151547 - 29151518
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  29151547 atatttgcagggactaaaatcatattttag 29151518  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 29693059 - 29693088
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  29693059 atatttgcagggactaaaatcatattttag 29693088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 31037427 - 31037394
Alignment:
Q  110 tatatttgcagggactaaaatcatattttagtct 143  Q
    |||||||||||||||||||| |||||||||||||    
T  31037427 tatatttgcagggactaaaaccatattttagtct 31037394  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Original strand, 31541622 - 31541679
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| |||||| ||||||  ||||||||||||||  |||| ||||||||||    
T  31541622 ttaccagggacaaaaaccaaaattcgttatatttgcagggatcaaaaacatattttag 31541679  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 14809217 - 14809165
Alignment:
Q  88 agggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||||||||| |||||||| ||||||||| |||||  |||| ||||||||||    
T  14809217 agggaccaaaatccaaattcgctatatttgtagggatcaaaaacatattttag 14809165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 27850343 - 27850375
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtct 143  Q
    |||||||||| ||||||||||||||||||||||    
T  27850343 atatttgcagagactaaaatcatattttagtct 27850375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 39379270 - 39379242
Alignment:
Q  111 atatttgcagggactaaaatcatatttta 139  Q
    |||||||||||||||||||||||||||||    
T  39379270 atatttgcagggactaaaatcatatttta 39379242  T

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Target: scaffold0599 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 138
Target Start/End: Original strand, 6584 - 6639
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttt 138  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||| || |||||    
T  6584 ttaccaggcaccaaaacccaaattcgctatatttgcagggactaaaagcacatttt 6639  T

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Target: scaffold0562 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 9981 - 9924
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    |||||||||||||||| ||||| || |||||||||||||||  |||| ||||||||||    
T  9981 ttaccagggaccaaaatccaaactcgctatatttgcagggatcaaaagcatattttag 9924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 139
Target Start/End: Complemental strand, 1919 - 1863
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatatttta 139  Q
    |||| ||||| |||||| |||| || |||||||||||||||| ||||||||||||||    
T  1919 ttactagggatcaaaactcaaactcgctatatttgcagggaccaaaatcatatttta 1863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0373 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Complemental strand, 8578 - 8549
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  8578 atatttgcagggactaaaatcatattttag 8549  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 140
Target Start/End: Original strand, 12505 - 12534
Alignment:
Q  111 atatttgcagggactaaaatcatattttag 140  Q
    ||||||||||||||||||||||||||||||    
T  12505 atatttgcagggactaaaatcatattttag 12534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 140
Target Start/End: Complemental strand, 202638 - 202581
Alignment:
Q  83 ttaccagggaccaaaacccaaattcactatatttgcagggactaaaatcatattttag 140  Q
    ||||| |||||||||| ||||| ||  ||||||||||||||| |||| ||||||||||    
T  202638 ttacccgggaccaaaatccaaactcgttatatttgcagggaccaaaagcatattttag 202581  T

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Target: scaffold0712 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 5240 - 5200
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctatttttat 151  Q
    ||||||||||||||||||| |||||||||| || |||||||    
T  5240 atatttgcagggactaaaaccatattttagcctttttttat 5200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 5260 - 5220
Alignment:
Q  111 atatttgcagggactaaaatcatattttagtctatttttat 151  Q
    ||||||||||||||||||| |||||||||| || |||||||    
T  5260 atatttgcagggactaaaaccatattttagcctttttttat 5220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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