View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19787_high_41 (Length: 274)
Name: NF19787_high_41
Description: NF19787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19787_high_41 |
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Alignment Details
Target: chr6 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 8 - 271
Target Start/End: Complemental strand, 19167215 - 19166952
Alignment:
| Q |
8 |
catcattttgttcaacacctccaaagaatacgtagaaataagaattcgtgcaaaatcaattctacctctttccaaagtacactcatcctcccgcacaaat |
107 |
Q |
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| T |
19167215 |
catcattttgttcaacacctccaaagaatacgtagaaataagaattcgtgcaaaatcaattctacctctttccaaagtacactcatcctcccgcacaaac |
19167116 |
T |
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| Q |
108 |
cttccacacttagaaacacatagcttgaaaaaatttatgttccaagcatgtaccggcgtaccatagattcgtacccacgcaccacgttcataccaaactt |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
19167115 |
cttccacacttagaaacacatagcttgaaaaaatttatgttccaagcatgtaccggcgtaccatagattcgtacccaagcaccacgttcataccaaactt |
19167016 |
T |
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| Q |
208 |
ctttcgacgtccatttatgcacatcggtaagaaacaatccnnnnnnntcagcagcatcattaaa |
271 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
19167015 |
ctttcgacgtccatttatgcacatcggtaagaaacaatccaaaaaaatcagcagcatcattaaa |
19166952 |
T |
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