View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19787_high_47 (Length: 262)
Name: NF19787_high_47
Description: NF19787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19787_high_47 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 47028101 - 47028342
Alignment:
| Q |
1 |
atgaagatcctttcatatatgtattaaattaaataactataaactatttttgtcttctttaaagttggtaagtttctacttctgtgattgtgattgtaga |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
47028101 |
atgaagatcctttcatatatgtattaaattaaataactataaactatttttgtcttctttaaagttggtaagtttctacttctgtg------attgtaga |
47028194 |
T |
|
| Q |
101 |
tggagcagcaaatttttgccgcagggggttcagctcctagatcgtgaatgataaggcgcagcgaagcattaatcttttccaatttgcatacaaagcaacc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
47028195 |
tggagcagcaaatttttgccgcagggggttcagctcctagatagtgaatgataaggcgcagtgaagcattaatcttttccaatttgcatacaaagcaacc |
47028294 |
T |
|
| Q |
201 |
acttttatcatgtttggattttactcatgaatgtgtccagtcctaaat |
248 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
47028295 |
acttttatcatgtttggattttactcatgaatgtgtccattcctaaat |
47028342 |
T |
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