View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19790_low_2 (Length: 348)
Name: NF19790_low_2
Description: NF19790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19790_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 206 - 338
Target Start/End: Original strand, 32938620 - 32938756
Alignment:
| Q |
206 |
atattattacattgtatgccactgcatatggtaattgat----taattaatggtgtggttttcagatacttccaccaaatattaaggggcttgctggaag |
301 |
Q |
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| T |
32938620 |
atattattacaaggtatgccactgcatgtggtaattgataaattaattaatggtttggttttcagatacttccaccaaatattaaggggcttgctggaag |
32938719 |
T |
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| Q |
302 |
tgctgcaacatttttgaattggttcactgcctctctg |
338 |
Q |
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| T |
32938720 |
tgctgcaacatttttgaattggttcactgcctctctg |
32938756 |
T |
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