View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19791_high_1 (Length: 741)

Name: NF19791_high_1
Description: NF19791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19791_high_1
NF19791_high_1
[»] chr8 (18 HSPs)
chr8 (168-648)||(132326-132797)
chr8 (12-112)||(132853-132953)
chr8 (645-724)||(131155-131234)
chr8 (16-112)||(23421480-23421576)
chr8 (359-467)||(8137631-8137739)
chr8 (359-475)||(30199473-30199589)
chr8 (377-442)||(4518964-4519028)
chr8 (380-442)||(19391487-19391548)
chr8 (380-428)||(5192371-5192419)
chr8 (380-463)||(4807700-4807781)
chr8 (566-629)||(18852443-18852506)
chr8 (380-463)||(19924388-19924469)
chr8 (380-463)||(38630178-38630259)
chr8 (377-463)||(18881600-18881685)
chr8 (404-470)||(32731394-32731460)
chr8 (380-442)||(8802500-8802561)
chr8 (390-463)||(17648366-17648437)
chr8 (308-365)||(30199389-30199445)
[»] chr2 (25 HSPs)
chr2 (310-494)||(9775391-9775576)
chr2 (348-494)||(22698915-22699062)
chr2 (310-475)||(35844827-35844992)
chr2 (305-556)||(35935368-35935637)
chr2 (347-475)||(11919756-11919884)
chr2 (347-464)||(19618840-19618957)
chr2 (359-439)||(25547878-25547958)
chr2 (362-561)||(28319088-28319292)
chr2 (390-470)||(15147828-15147907)
chr2 (377-442)||(15735207-15735271)
chr2 (377-445)||(25298898-25298965)
chr2 (376-463)||(17368339-17368424)
chr2 (305-356)||(35935366-35935417)
chr2 (310-356)||(22698848-22698894)
chr2 (310-364)||(22699072-22699126)
chr2 (380-442)||(38716336-38716397)
chr2 (380-465)||(18537928-18538011)
chr2 (380-460)||(14743443-14743522)
chr2 (380-463)||(9787682-9787763)
chr2 (380-463)||(11176030-11176111)
chr2 (362-439)||(74970-75046)
chr2 (380-463)||(2986809-2986890)
chr2 (381-463)||(331835-331916)
chr2 (380-442)||(6763817-6763878)
chr2 (310-355)||(25547801-25547846)
[»] chr7 (32 HSPs)
chr7 (359-475)||(9154377-9154493)
chr7 (359-475)||(38722882-38722998)
chr7 (359-465)||(45782101-45782207)
chr7 (359-494)||(24730821-24730957)
chr7 (347-468)||(46267313-46267434)
chr7 (377-463)||(23439716-23439801)
chr7 (359-468)||(14196902-14197011)
chr7 (377-442)||(36746600-36746664)
chr7 (379-463)||(35337621-35337703)
chr7 (380-463)||(3562533-3562614)
chr7 (377-428)||(23461118-23461169)
chr7 (380-463)||(27869295-27869376)
chr7 (380-466)||(6650629-6650714)
chr7 (380-442)||(31494053-31494114)
chr7 (377-463)||(39440217-39440302)
chr7 (390-428)||(47113271-47113309)
chr7 (377-442)||(19195310-19195374)
chr7 (390-463)||(20636742-20636813)
chr7 (397-469)||(5348143-5348215)
chr7 (380-428)||(15681786-15681834)
chr7 (391-463)||(41452360-41452430)
chr7 (380-419)||(1921040-1921079)
chr7 (380-463)||(21224452-21224533)
chr7 (359-429)||(35533551-35533622)
chr7 (388-463)||(39182056-39182130)
chr7 (380-470)||(5087111-5087200)
chr7 (310-356)||(9154300-9154346)
chr7 (380-442)||(10023885-10023945)
chr7 (390-428)||(14624758-14624796)
chr7 (377-463)||(23473112-23473197)
chr7 (393-463)||(26126376-26126445)
chr7 (391-460)||(4193675-4193743)
[»] chr3 (29 HSPs)
chr3 (359-475)||(2683057-2683174)
chr3 (359-475)||(32463498-32463614)
chr3 (359-475)||(48743210-48743328)
chr3 (380-470)||(3820997-3821086)
chr3 (380-429)||(40836278-40836327)
chr3 (380-463)||(3328913-3328994)
chr3 (361-475)||(24312744-24312859)
chr3 (380-463)||(26628125-26628206)
chr3 (380-463)||(48907392-48907473)
chr3 (380-463)||(4522077-4522158)
chr3 (380-463)||(13081017-13081098)
chr3 (380-442)||(8339040-8339101)
chr3 (377-463)||(27852849-27852932)
chr3 (311-357)||(48743134-48743180)
chr3 (393-442)||(25179721-25179769)
chr3 (380-469)||(32960743-32960829)
chr3 (380-428)||(3781034-3781082)
chr3 (390-442)||(6927613-6927664)
chr3 (390-442)||(26633469-26633520)
chr3 (380-428)||(28154982-28155030)
chr3 (394-442)||(30155259-30155306)
chr3 (390-442)||(46673157-46673209)
chr3 (305-356)||(2683205-2683256)
chr3 (380-463)||(8542733-8542814)
chr3 (380-463)||(22500695-22500776)
chr3 (380-463)||(34878629-34878710)
chr3 (377-459)||(22416460-22416541)
chr3 (310-356)||(24312897-24312943)
chr3 (306-363)||(53195553-53195610)
[»] chr1 (14 HSPs)
chr1 (362-475)||(18106790-18106903)
chr1 (347-442)||(16858473-16858568)
chr1 (380-463)||(24962076-24962157)
chr1 (377-428)||(29676235-29676286)
chr1 (380-442)||(3616942-3617003)
chr1 (361-475)||(23279673-23279788)
chr1 (380-463)||(24196384-24196465)
chr1 (380-442)||(19078025-19078086)
chr1 (380-442)||(19125915-19125976)
chr1 (380-442)||(48471963-48472024)
chr1 (380-442)||(4059622-4059683)
chr1 (305-355)||(16858350-16858400)
chr1 (380-442)||(27092952-27093013)
chr1 (390-463)||(24749921-24749992)
[»] scaffold0186 (1 HSPs)
scaffold0186 (19-104)||(4265-4350)
[»] chr5 (17 HSPs)
chr5 (359-440)||(38322345-38322426)
chr5 (363-475)||(20732614-20732725)
chr5 (359-475)||(16287596-16287711)
chr5 (363-475)||(18739825-18739937)
chr5 (362-475)||(38545358-38545471)
chr5 (359-475)||(26214113-26214229)
chr5 (380-463)||(245717-245798)
chr5 (380-463)||(18695126-18695207)
chr5 (362-416)||(3023667-3023721)
chr5 (380-442)||(16901097-16901158)
chr5 (305-354)||(16287506-16287555)
chr5 (380-463)||(40428739-40428820)
chr5 (390-428)||(17825607-17825645)
chr5 (380-442)||(25556975-25557036)
chr5 (377-442)||(26639134-26639198)
chr5 (305-355)||(18739973-18740023)
chr5 (390-428)||(41663633-41663671)
[»] scaffold0005 (2 HSPs)
scaffold0005 (359-475)||(205045-205161)
scaffold0005 (359-469)||(54983-55092)
[»] chr4 (18 HSPs)
chr4 (359-475)||(7540168-7540284)
chr4 (359-475)||(14612216-14612332)
chr4 (359-469)||(14784638-14784747)
chr4 (359-475)||(47645526-47645642)
chr4 (362-440)||(33978876-33978954)
chr4 (380-463)||(13397775-13397856)
chr4 (380-467)||(25618728-25618813)
chr4 (361-442)||(40259646-40259727)
chr4 (380-463)||(13826519-13826600)
chr4 (380-463)||(15058918-15058999)
chr4 (380-442)||(2715817-2715878)
chr4 (380-442)||(5304447-5304508)
chr4 (305-355)||(7540323-7540373)
chr4 (380-428)||(27018370-27018418)
chr4 (380-463)||(4357375-4357456)
chr4 (380-463)||(51291269-51291351)
chr4 (381-463)||(4098779-4098860)
chr4 (380-442)||(35475432-35475493)
[»] scaffold0010 (2 HSPs)
scaffold0010 (362-494)||(128433-128564)
scaffold0010 (305-356)||(128349-128400)
[»] scaffold0064 (1 HSPs)
scaffold0064 (347-468)||(54487-54606)
[»] scaffold0084 (1 HSPs)
scaffold0084 (374-466)||(4610-4701)
[»] chr6 (16 HSPs)
chr6 (359-475)||(19176487-19176602)
chr6 (380-470)||(20863828-20863917)
chr6 (390-442)||(26710417-26710468)
chr6 (377-428)||(18791513-18791564)
chr6 (380-463)||(25819807-25819888)
chr6 (380-463)||(31210917-31210998)
chr6 (380-463)||(35102591-35102672)
chr6 (388-442)||(8412901-8412954)
chr6 (380-470)||(23124820-23124909)
chr6 (19-81)||(28732444-28732506)
chr6 (382-442)||(11661021-11661081)
chr6 (377-442)||(22269549-22269613)
chr6 (391-439)||(12427378-12427426)
chr6 (305-364)||(9362740-9362799)
chr6 (380-463)||(24603484-24603565)
chr6 (377-463)||(32451849-32451933)
[»] scaffold0025 (2 HSPs)
scaffold0025 (380-463)||(19405-19486)
scaffold0025 (377-463)||(61937-62023)
[»] scaffold0173 (1 HSPs)
scaffold0173 (359-442)||(22929-23013)
[»] scaffold0607 (1 HSPs)
scaffold0607 (380-442)||(2149-2210)
[»] scaffold0406 (1 HSPs)
scaffold0406 (380-428)||(2147-2195)
[»] scaffold0267 (1 HSPs)
scaffold0267 (380-463)||(3668-3749)
[»] scaffold0087 (1 HSPs)
scaffold0087 (380-427)||(25064-25111)
[»] scaffold0007 (1 HSPs)
scaffold0007 (380-442)||(250618-250679)
[»] scaffold0001 (1 HSPs)
scaffold0001 (390-428)||(142057-142095)


Alignment Details
Target: chr8 (Bit Score: 352; Significance: 0; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 168 - 648
Target Start/End: Complemental strand, 132797 - 132326
Alignment:
Q  168 gtatttcttattaattttaattcaaactctactattttaatttgttaaaatgccaaataaactttatagaaaaaacaattctgatttgtataagctcttt 267  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  132797 gtatttctttttaattttaattcaaactccactattttaatttgttaaaatgccaaataaactttatagaaaaaacaattctgatttgtataagctcttt 132698  T
Q  268 taaacaaatgaatgatactgcaccaccacaaacttacaaggtttaaatgcatttttgaccccctatatttgccgtcgtagcaattttggttccctaattt 367  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  || ||||||    
T  132697 taaacaaatggatgatactgcaccaccacaaacttacaaggtttaaatgcatttttga-cccctatgtttgccgtcgtagcaattttggccccataattt 132599  T
Q  368 tcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaac 467  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  132598 tcgcaactatgttgagaagccgccacgtgtcccaaaaaaggggccaaaattgcaacttttttgcaaaaataagggatcggaagagcatattttcctaaac 132499  T
Q  468 atgacaaattagatggttaaaattgcannnnnnnga-taggggaccaaatttgctacgacggcaaaggaggtcaaaagtgcatttaagccaacttacaat 566  Q
    |||||||||||| ||||||||||||||        | |||||||||||||||||||||||||||||     |||||||||||||||||||||||     |    
T  132498 atgacaaattaggtggttaaaattgcattttttttattaggggaccaaatttgctacgacggcaaa----ctcaaaagtgcatttaagccaact-----t 132408  T
Q  567 acaatagagacaagagtttatcatcactcgcacactccaaacgattgcacccaacaacaaaaacatttgtagtagcggcatg 648  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  132407 acaatagagacaagagtttatcatcactcgcacactccaaacgattgcacccaacaacaaaaacatttgtagtagcggcatg 132326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 12 - 112
Target Start/End: Complemental strand, 132953 - 132853
Alignment:
Q  12 agcaaagggggtgacaattgtgaagaaagtatttaattagaaacaaatttataaaattatcatttagttaatctattctactcaagttaatcagaaacag 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  132953 agcaaagggggtgacaattgtgaagaaagtatttaattagaaacaaatttataaaattatcatttagttaatctattctactcaagttaatcagaaacag 132854  T
Q  112 a 112  Q
    |    
T  132853 a 132853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 645 - 724
Target Start/End: Complemental strand, 131234 - 131155
Alignment:
Q  645 catgtgtcaatgttgcattacaaagcggtttatgccactgacattgctgctcgggcttgaagctactgtgtccttgccat 724  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  131234 catgtgtcaacgttgcattacaaagcgatttatgccactgacattgctgctcgggcttgaagctactgtgtccttgccat 131155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 23421480 - 23421576
Alignment:
Q  16 aagggggtgacaattgtgaagaaagtatttaattagaaacaaatttataaaattatcatttagttaatctattctactcaagttaatcagaaacaga 112  Q
    |||||||||| | ||||||||||||  ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  23421480 aagggggtgatagttgtgaagaaagcgtttaactaaaaacaaatttataaaattatcatttagttaatctattctactcaagttaattagaaccaga 23421576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 359 - 467
Target Start/End: Complemental strand, 8137739 - 8137631
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||| |||||||| ||||||||| | ||||||| ||||||| | |||| ||| |||||| |||||| ||||||||||  |  |||||||||||    
T  8137739 ccctaattttcccaactatgctgagaagccgcaacgtgtctcaaaaaatgagccataattgcaactattttgcgaagataagggggcaaaagagcatatt 8137640  T
Q  459 tccctaaac 467  Q
    |||||||||    
T  8137639 tccctaaac 8137631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 359 - 475
Target Start/End: Complemental strand, 30199589 - 30199473
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaac-ttttttgcaaagataagggatcggaagagcatat 457  Q
    |||||||||| ||||||| | ||| ||||| |||||||||||| |||||||| ||||||| |||| ||||||| ||||||||||| |   ||||||||||    
T  30199589 ccctaatttttgcaactacgctgaaaagccgccacgtgtccca-aaaaggggtcaaaatcacaactttttttgtaaagataaggggttaaaagagcatat 30199491  T
Q  458 ttccctaaacatgacaaa 475  Q
    || |||||||||| ||||    
T  30199490 tttcctaaacatggcaaa 30199473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 442
Target Start/End: Original strand, 4518964 - 4519028
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  4518964 tgttgagaagacgccacgtgtcccaaaaaaggggccataatcgcaac-tttttgtaaagataaggg 4519028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 19391487 - 19391548
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | |||||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  19391487 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaac-tttttgtaaagataaggg 19391548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 428
Target Start/End: Original strand, 5192371 - 5192419
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||||    
T  5192371 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaacttttt 5192419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 4807700 - 4807781
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||| ||||||||||||||| ||||||||| |||||| ||||||||||| ||  || |||||||||||||    
T  4807700 tgagaagacgccacgtgttccaaaaaaggggccataatcgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 4807781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 566 - 629
Target Start/End: Complemental strand, 18852506 - 18852443
Alignment:
Q  566 tacaatagagacaagagtttatcatcactcgcacactccaaacgattgcacccaacaacaaaaa 629  Q
    |||| ||| ||||||||| ||||||||||| ||||||| |||| |||||||||||||| |||||    
T  18852506 tacagtagggacaagagtatatcatcactctcacactctaaacaattgcacccaacaaaaaaaa 18852443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 19924469 - 19924388
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | ||||||||||||||||||||| || |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  19924469 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 19924388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 38630259 - 38630178
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | ||||||||||||||||||||| || |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  38630259 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 38630178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 377 - 463
Target Start/End: Original strand, 18881600 - 18881685
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||||||| ||||| |||||||||| |||||| || ||| |||||||||| | ||||||||||| ||  |||||| |||||||||    
T  18881600 tgttgagaagacaccaagtgtcccaaataaggggtcataattgcaacttttt-gtaaagataaggggtcaaaagagcgtatttccct 18881685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 404 - 470
Target Start/End: Complemental strand, 32731460 - 32731394
Alignment:
Q  404 aaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaacatg 470  Q
    |||||||||||||||| |||||||| | |||||||||||  |  |||||||||||| ||||||||||    
T  32731460 aaaggggccaaaatcgtaactttttggtaaagataaggggccaaaagagcatattttcctaaacatg 32731394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 8802500 - 8802561
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | |||| ||| ||||||||||||||| ||||||||| |||||| |||||||||||    
T  8802500 tgagaagacgccacatgttccaaaaaaggggccataatcgcaac-tttttgtaaagataaggg 8802561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 463
Target Start/End: Complemental strand, 17648437 - 17648366
Alignment:
Q  390 ccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||||||| ||||| ||||||| |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  17648437 ccacgtgtcctaaaaagggggccataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 17648366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 365
Target Start/End: Original strand, 30199389 - 30199445
Alignment:
Q  308 gtttaaatgcatttttgaccccctatatttgccgtcgtagcaattttggttccctaat 365  Q
    |||||||| || |||||||||| ||| |||||||||||||||||||| || |||||||    
T  30199389 gtttaaatacacttttgacccc-tatgtttgccgtcgtagcaattttagtcccctaat 30199445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 2e-57; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 310 - 494
Target Start/End: Original strand, 9775391 - 9775576
Alignment:
Q  310 ttaaatgcatttttgaccccctatatttgccgtcgtagcaattttggttccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggg 409  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||  |||||||||| ||||||||||||||||||| ||  ||||||||||||||||    
T  9775391 ttaaatgcatttttgatcccctatgtttgccgtcgtagcaattttggccccctaatttttgcaactatgttgagaagccgccgtgtgtcccaaaaaaggg 9775490  T
Q  410 gccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaacatgac-aaattagatggttaaaattgca 494  Q
    | ||||||| |||| |||||||||||||||||| || ||||||||||||| |||||||||||| |||||||  |||||||||||||    
T  9775491 gtcaaaatcacaacatttttgcaaagataaggggtcagaagagcatattttcctaaacatgacaaaattagggggttaaaattgca 9775576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 348 - 494
Target Start/End: Original strand, 22698915 - 22699062
Alignment:
Q  348 caattttggttccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcgg 447  Q
    |||||||||  |||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||| |||||||||||||||||| || |    
T  22698915 caattttggccccctaattttcgcaactatgttgagaagccgccatgtgtcccaaaaaaggggtcaaaatcacaacatttttgcaaagataaggggtcag 22699014  T
Q  448 aagagcatatttccctaaacatgac-aaattagatggttaaaattgca 494  Q
    |||||||||||| |||||||||||| |||||||  |||||||||||||    
T  22699015 aagagcatattttcctaaacatgacaaaattagggggttaaaattgca 22699062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 310 - 475
Target Start/End: Complemental strand, 35844992 - 35844827
Alignment:
Q  310 ttaaatgcatttttgaccccctatatttgccgtcgtagcaattttggttccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggg 409  Q
    ||||||||||||||| ||| |||| |||||| ||||||||||||||   |||| |||||| |||||||||||||||||| ||||||| ||||||||||||    
T  35844992 ttaaatgcatttttggccctctatgtttgccttcgtagcaattttgaccccctcattttcccaactatgttgagaagccgccacgtgccccaaaaaaggg 35844893  T
Q  410 gccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaacatgacaaa 475  Q
    ||||||||| ||||||||||| |||||||||||  |  ||||||||||||  ||||||||||||||    
T  35844892 gccaaaatcacaacttttttgtaaagataaggggccaaaagagcatatttttctaaacatgacaaa 35844827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 305 - 556
Target Start/End: Complemental strand, 35935637 - 35935368
Alignment:
Q  305 aaggtttaaatgcatttttgaccccctatatttgccgtcgta-----------gcaattttggttccctaattttcgcaactatgttgagaagccaccac 393  Q
    ||||||||||||||||||||| ||||||| ||||||||||||           ||||||||||  |||||||||||||||||||||||||||| | |||     
T  35935637 aaggtttaaatgcatttttgatcccctatgtttgccgtcgtactacggtcgtagcaattttggccccctaattttcgcaactatgttgagaagtcgccat 35935538  T
Q  394 gtgtcccaaaaaa-ggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaacatgac-aaattagatggttaaaatt 491  Q
    ||||||||||||| |||| |||| || |||| |||||||||||||||||| || ||||||||||||| || ||||||||| |||||||  |||| |||||    
T  35935537 gtgtcccaaaaaagggggtcaaagtcacaacatttttgcaaagataaggggtcagaagagcatattttccgaaacatgacaaaattagggggtttaaatt 35935438  T
Q  492 gca-nnnnnnngataggggaccaaatttgctacgacggcaa----aggaggtcaaaagtgcatttaagcc 556  Q
    |||        | |||||| ||||| |||||||||||||||    ||| || ||||||||||||||||||    
T  35935437 gcattttttttgttagggggccaaaattgctacgacggcaaatatagggggccaaaagtgcatttaagcc 35935368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 347 - 475
Target Start/End: Complemental strand, 11919884 - 11919756
Alignment:
Q  347 gcaattttggttccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcg 446  Q
    ||||||||||  ||| | |||||  ||||||| ||||||||| |||||||||||||||||| |  ||||||||||||||||||| |||||||||||  |     
T  11919884 gcaattttggcccccaagttttcctaactatgctgagaagccgccacgtgtcccaaaaaagtgatcaaaatcgcaacttttttgtaaagataagggggca 11919785  T
Q  447 gaagagcatatttccctaaacatgacaaa 475  Q
     |||||||||||| |||||||||| ||||    
T  11919784 aaagagcatattttcctaaacatggcaaa 11919756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 347 - 464
Target Start/End: Original strand, 19618840 - 19618957
Alignment:
Q  347 gcaattttggttccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcg 446  Q
    ||||||||||| ||||| ||||  ||||||||||||| |||| |||| |||||||||||||||| || || | ||||||||||| ||||||||||| |      
T  19618840 gcaattttggtcccctagtttttccaactatgttgagcagccgccacatgtcccaaaaaaggggtcataaacacaacttttttgtaaagataaggggtta 19618939  T
Q  447 gaagagcatatttcccta 464  Q
     |||||||||||||||||    
T  19618940 aaagagcatatttcccta 19618957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 359 - 439
Target Start/End: Original strand, 25547878 - 25547958
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataa 439  Q
    ||||||||||| |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||| | ||||||||    
T  25547878 ccctaattttcccaactatgctgagaagccaccacatgtcccaaaaaatgtgccaaaatcgcaactttttggtaaagataa 25547958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 362 - 561
Target Start/End: Original strand, 28319088 - 28319292
Alignment:
Q  362 taattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttcc 461  Q
    |||||||  ||||||||||||||||||  |||||||  ||||||| ||| || |||||||||| ||||| |||||||| ||| |  || |||||||||||    
T  28319088 taattttgccaactatgttgagaagccgtcacgtgtatcaaaaaatgggtcataatcgcaactattttgtaaagataa-ggaccaaaaaagcatatttcc 28319186  T
Q  462 ctaaacatgacaaa-ttagatggttaaaattgca-nnnnnnngataggggaccaaatttgctacgacggcaa----aggaggtcaaaagtgcatttaagc 555  Q
    ||||||||| |||| ||||| ||| |||||||||        | |||||||||||| ||||||||   ||||    ||||||||||||||||||||||||    
T  28319187 ctaaacatggcaaacttagagggtcaaaattgcattttttttgttaggggaccaaaattgctacggttgcaaacataggaggtcaaaagtgcatttaagc 28319286  T
Q  556 caactt 561  Q
    | ||||    
T  28319287 ctactt 28319292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 390 - 470
Target Start/End: Complemental strand, 15147907 - 15147828
Alignment:
Q  390 ccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaacatg 470  Q
    |||||||||||||||||||||| | |||||||||| |||||  ||||||| |||||  |||||||||||||||||||||||    
T  15147907 ccacgtgtcccaaaaaaggggctataatcgcaact-ttttgttaagataatggatcaaaagagcatatttccctaaacatg 15147828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 442
Target Start/End: Complemental strand, 15735271 - 15735207
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  15735271 tgttgagaagacgccacgtgtcccaaaaaaggggccataatcgcaact-ttttgtaaagataaggg 15735207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 377 - 445
Target Start/End: Original strand, 25298898 - 25298965
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatc 445  Q
    ||||||||||   |||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||    
T  25298898 tgttgagaagatgccacgtgtcccaaaaaaggggccataatcgcaac-tttttgtaaagataagggatc 25298965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 376 - 463
Target Start/End: Complemental strand, 17368424 - 17368339
Alignment:
Q  376 atgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||||||| | |||||||||||||||||||||||| ||| ||||| |||||| ||||||||||| ||  || |||||||||||||    
T  17368424 atgttgagaagacgccacgtgtcccaaaaaaggggccataattgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 17368339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 305 - 356
Target Start/End: Original strand, 35935366 - 35935417
Alignment:
Q  305 aaggtttaaatgcatttttgaccccctatatttgccgtcgtagcaattttgg 356  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||||    
T  35935366 aaggcttaaatgcacttttggccccctatatttgccgtcgtagcaattttgg 35935417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 22698848 - 22698894
Alignment:
Q  310 ttaaatgcatttttgaccccctatatttgccgtcgtagcaattttgg 356  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  22698848 ttaaatacatttttgaccccctatgtttgccgtcgtagcaattttgg 22698894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 22699126 - 22699072
Alignment:
Q  310 ttaaatgcatttttgaccccctatatttgccgtcgtagcaattttggttccctaa 364  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||  |||||||    
T  22699126 ttaaatgcacttttgaccccctatgtttgccgtcgtagcaattttgactccctaa 22699072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 38716397 - 38716336
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | |||||||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  38716397 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaact-ttttgtaaagataaggg 38716336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 465
Target Start/End: Original strand, 18537928 - 18538011
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaa 465  Q
    ||||||| | |||||||||||||||||||||||| ||| ||||| |||||| ||||||||||| ||  || |||||||||||||||    
T  18537928 tgagaagacgccacgtgtcccaaaaaaggggccataattgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccctaa 18538011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 460
Target Start/End: Complemental strand, 14743522 - 14743443
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttc 460  Q
    ||||||||||||||||||||||||| |||||| | ||||||||  |||||||||| |||||||  |  |||||||||||||    
T  14743522 tgagaagccaccacgtgtcccaaaataggggctataatcgcaa-atttttgcaaaaataaggggccaaaagagcatatttc 14743443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 9787763 - 9787682
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||||| ||||| ||| |||||| ||||||||||| ||  || |||||||||||||    
T  9787763 tgagaagacgccacgtgtcccaaaaaaggggccataatcgtaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 9787682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 11176111 - 11176030
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||||| |||| |||| |||||| ||||||||||| ||  || |||||||||||||    
T  11176111 tgagaagacgccacgtgtcccaaaaaaggggccataatcacaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 11176030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 362 - 439
Target Start/End: Complemental strand, 75046 - 74970
Alignment:
Q  362 taattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataa 439  Q
    ||||||||  || |||||||||||||  ||||||||| |||||| |||| || |||||||||||||||| ||||||||    
T  75046 taattttccaaaatatgttgagaagctgccacgtgtctcaaaaa-ggggtcataatcgcaacttttttgtaaagataa 74970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 2986890 - 2986809
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | ||| |||||| ||||||||||||| |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  2986890 tgagaagacgccatgtgtccaaaaaaaggggccataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 2986809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 381 - 463
Target Start/End: Complemental strand, 331916 - 331835
Alignment:
Q  381 gagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||||| |||| ||| | |||| ||||| || |||||||||||||| |||||||||| |||||  || |||||||||||||    
T  331916 gagaagccgccacatgttcaaaaataggggtcataatcgcaacttttt-gcaaagataatggatcaaaaaagcatatttccct 331835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 6763817 - 6763878
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | |||||||||||||||||||||||  |||||| || |||||| |||||||||||    
T  6763817 tgagaagacgccacgtgtcccaaaaaaggggccgtaatcgctac-tttttgtaaagataaggg 6763878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 25547801 - 25547846
Alignment:
Q  310 ttaaatgcatttttgaccccctatatttgccgtcgtagcaattttg 355  Q
    ||||||||| |||||| || |||| |||||||||||||||||||||    
T  25547801 ttaaatgcacttttgatcctctatgtttgccgtcgtagcaattttg 25547846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 2e-35; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 359 - 475
Target Start/End: Original strand, 9154377 - 9154493
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||  |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |  |||||||||||    
T  9154377 ccctaatttttccaactatgttgagaagccgccacgtgtcccataaaaggggccataatcgcaacttttttgcaaagataagggaccaaaagagcatatt 9154476  T
Q  459 tccctaaacatgacaaa 475  Q
    || ||||||||| ||||    
T  9154477 tctctaaacatggcaaa 9154493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 359 - 475
Target Start/End: Original strand, 38722882 - 38722998
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||  |  |||||||||||    
T  38722882 ccctaattttcccaactatgctgagaagccgccacgtgtcccaaaaaaggggccaaaatcgcaactttttggtaaagataagggtccaaaagagcatatt 38722981  T
Q  459 tccctaaacatgacaaa 475  Q
    |||||||||||| ||||    
T  38722982 tccctaaacatggcaaa 38722998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 359 - 465
Target Start/End: Original strand, 45782101 - 45782207
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||||    |||||||||||    
T  45782101 ccctaatttttccaactatgttgagaagccaccgcgtgtcccaaaaaaggggccataatcgcaatttttttgtaaagataagggacgaaaagagcatatt 45782200  T
Q  459 tccctaa 465  Q
    | |||||    
T  45782201 ttcctaa 45782207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 359 - 494
Target Start/End: Complemental strand, 24730957 - 24730821
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||| |||||||| ||||||||| |||||||| ||||||||||| |||   |||||||||||||| ||||||| |||  |  |||||||||||    
T  24730957 ccctaattttcccaactatgctgagaagccgccacgtgttccaaaaaagggaccatggtcgcaacttttttgtaaagatacggggccaaaagagcatatt 24730858  T
Q  459 tccctaaacatgac-aaattagatggttaaaattgca 494  Q
    ||| |||||||||| |||||||| ||| |||||||||    
T  24730857 tccttaaacatgacaaaattagagggtcaaaattgca 24730821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 347 - 468
Target Start/End: Original strand, 46267313 - 46267434
Alignment:
Q  347 gcaattttggttccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcg 446  Q
    ||||||||||  ||||||||||| |||||||| | ||||||| |||| ||||||||||||||||||| |||||||||||||||| ||||||||  | ||     
T  46267313 gcaattttggccccctaattttcccaactatgcttagaagccgccacatgtcccaaaaaaggggccataatcgcaacttttttgtaaagataataggtca 46267412  T
Q  447 gaagagcatatttccctaaaca 468  Q
     | |||||||||| ||||||||    
T  46267413 aatgagcatattttcctaaaca 46267434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 377 - 463
Target Start/End: Complemental strand, 23439801 - 23439716
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||||||||| ||||||||||||||| ||||| || |||||||||||||||  ||||||||||||||  ||||||||||||||||    
T  23439801 tgttgagaagccgccacgtgtcccaaaacaggggtcataatcgcaactttttt-aaaagataagggatcaaaagagcatatttccct 23439716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 468
Target Start/End: Original strand, 14196902 - 14197011
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaac-ttttttgcaaagataagggatcggaagagcatat 457  Q
    ||||||| ||| |||||||||||||||||| |||| ||| || |||||||||||| ||| ||||| ||||||| |||||||| || ||  ||||||||||    
T  14196902 ccctaatattcccaactatgttgagaagccgccacatgttcc-aaaaaggggccataattgcaactttttttgtaaagataaagggtcaaaagagcatat 14197000  T
Q  458 ttccctaaaca 468  Q
    |||||||||||    
T  14197001 ttccctaaaca 14197011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 442
Target Start/End: Original strand, 36746600 - 36746664
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    |||||||||| | ||||||||||||||||||||| || ||||||||| |||||| |||||||||||    
T  36746600 tgttgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaac-tttttgtaaagataaggg 36746664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 379 - 463
Target Start/End: Original strand, 35337621 - 35337703
Alignment:
Q  379 ttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||||| | ||||||||||||||||||||| || ||||||||| |||||| ||||||||||| ||  || |||||||||||||    
T  35337621 ttgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 35337703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 3562533 - 3562614
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||| ||||||||||||| ||||||||| |||||| ||||||||||| ||  || |||||||||||||    
T  3562533 tgagaagacgccacgtgtcctaaaaaaggggccataatcgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 3562614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 377 - 428
Target Start/End: Original strand, 23461118 - 23461169
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    |||||||||||| ||||||||||||||| ||||| || ||||||||||||||    
T  23461118 tgttgagaagccgccacgtgtcccaaaacaggggtcataatcgcaacttttt 23461169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 27869295 - 27869376
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | ||| |||||||||||||||||||| ||||||||| |||||| ||||||||||| ||  || |||||||||||||    
T  27869295 tgagaagacgccatgtgtcccaaaaaaggggccataatcgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 27869376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 466
Target Start/End: Complemental strand, 6650714 - 6650629
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaa 466  Q
    ||||||| | |||| |||| ||||| |||||||| |||||||||| |||||  |||||||||| ||  |||||||||||||||||||    
T  6650714 tgagaagacgccacatgtctcaaaacaggggccataatcgcaact-ttttgagaagataaggggtcaaaagagcatatttccctaaa 6650629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 31494114 - 31494053
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | |||||||| ||||||||||||||| |||||||||| ||||| |||||||||||    
T  31494114 tgagaagacgccacgtgttccaaaaaaggggccataatcgcaact-ttttgtaaagataaggg 31494053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 377 - 463
Target Start/End: Original strand, 39440217 - 39440302
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||||||| | |||| ||||| |||| ||||| || ||||||||| |||||| ||||||||||||||  |||| |||||||||||    
T  39440217 tgttgagaagacgccacatgtcctaaaacaggggtcataatcgcaac-tttttgaaaagataagggatcaaaagatcatatttccct 39440302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 428
Target Start/End: Complemental strand, 47113309 - 47113271
Alignment:
Q  390 ccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  47113309 ccacgtgtcccaaaacaggggccaaaatcgcaacttttt 47113271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 442
Target Start/End: Original strand, 19195310 - 19195374
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    |||||||||| | |||| ||||||||||||||||||| |||| |||| |||||| |||||||||||    
T  19195310 tgttgagaagacgccacatgtcccaaaaaaggggccataatcacaac-tttttgtaaagataaggg 19195374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 463
Target Start/End: Complemental strand, 20636813 - 20636742
Alignment:
Q  390 ccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||||||||||||||||| || |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  20636813 ccacgtgtcccaaaaaaggggtcataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 20636742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 5348215 - 5348143
Alignment:
Q  397 tcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaacat 469  Q
    |||||||| ||| |||| |||||||||||||||   |||||||||| ||  |||||||||||| |||||||||    
T  5348215 tcccaaaacaggagccataatcgcaactttttttagaagataaggggtcaaaagagcatattttcctaaacat 5348143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 428
Target Start/End: Complemental strand, 15681834 - 15681786
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    ||||||| | |||||||||||||||||| ||||| ||||||||||||||    
T  15681834 tgagaagacgccacgtgtcccaaaaaagaggccataatcgcaacttttt 15681786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 463
Target Start/End: Original strand, 41452360 - 41452430
Alignment:
Q  391 cacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||||||||||||||||| || ||||||||| |||||| ||||||||||| ||  || |||||||||||||    
T  41452360 cacgtgtcccaaaaaaggggtcataatcgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 41452430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 419
Target Start/End: Complemental strand, 1921079 - 1921040
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcg 419  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  1921079 tgagaagccgccacgtgtcccaaaaaaggggccataatcg 1921040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 21224452 - 21224533
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | ||||||||| ||||||| |||||| ||||||||| |||||| ||||||||||| ||  || |||||||||||||    
T  21224452 tgagaagacgccacgtgtctcaaaaaaagggccataatcgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 21224533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 359 - 429
Target Start/End: Complemental strand, 35533622 - 35533551
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaa-ggggccaaaatcgcaactttttt 429  Q
    ||||||||||  |||||||| | ||||||  ||||||||||||||||| ||||||| |||||||| ||||||    
T  35533622 ccctaatttttccaactatgataagaagctgccacgtgtcccaaaaaagggggccataatcgcaattttttt 35533551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 388 - 463
Target Start/End: Complemental strand, 39182130 - 39182056
Alignment:
Q  388 caccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||||||||||||| || ||||| |||||||||| |||||  |||||||||| ||  |||| |||||||||||    
T  39182130 caccacgtgtcccaaaacagaggccataatcgcaact-ttttgagaagataaggggtcaaaagatcatatttccct 39182056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 470
Target Start/End: Complemental strand, 5087200 - 5087111
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaacatg 470  Q
    ||||||| | ||||||||||||||| ||||  || |||||||||| ||||| ||||||||||| ||  || | |||||||||||| |||||    
T  5087200 tgagaagacgccacgtgtcccaaaatagggatcataatcgcaact-ttttgaaaagataaggggtcaaaaaatcatatttccctatacatg 5087111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 310 - 356
Target Start/End: Original strand, 9154300 - 9154346
Alignment:
Q  310 ttaaatgcatttttgaccccctatatttgccgtcgtagcaattttgg 356  Q
    ||||||||| ||||||||| |||| |||||| |||||||||||||||    
T  9154300 ttaaatgcacttttgaccctctatgtttgccatcgtagcaattttgg 9154346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 10023885 - 10023945
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| ||||||||||||| |||||||||||| | ||||||| |||||| |||||||||||    
T  10023885 tgagaagacaccacgtgtccc-aaaaaggggccatattcgcaac-tttttgtaaagataaggg 10023945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 390 - 428
Target Start/End: Complemental strand, 14624796 - 14624758
Alignment:
Q  390 ccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    |||||||||||||||||||||||| ||| ||||||||||    
T  14624796 ccacgtgtcccaaaaaaggggccataattgcaacttttt 14624758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 377 - 463
Target Start/End: Complemental strand, 23473197 - 23473112
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||||||||| ||||||||||||||| || || || |||| |||| |||||| |||||||||  | |  ||||||||||||||||    
T  23473197 tgttgagaagccgccacgtgtcccaaaacagaggtcataatcacaac-tttttgaaaagataagataccaaaagagcatatttccct 23473112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 393 - 463
Target Start/End: Complemental strand, 26126445 - 26126376
Alignment:
Q  393 cgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||||||||| |||||||| |||||||||| |||||  |||||||||| ||  |||| |||||||||||    
T  26126445 cgtgtcccaaaacaggggccataatcgcaact-ttttgagaagataaggggtcaaaagatcatatttccct 26126376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 460
Target Start/End: Complemental strand, 4193743 - 4193675
Alignment:
Q  391 cacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttc 460  Q
    |||||||| |||||||||||||| ||| ||||| |||||| ||||||||||| ||  |||| ||||||||    
T  4193743 cacgtgtctcaaaaaaggggccataattgcaac-tttttgaaaagataaggggtcaaaagatcatatttc 4193675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 4e-31; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 359 - 475
Target Start/End: Complemental strand, 2683174 - 2683057
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||||    |||||||||||    
T  2683174 ccctaattttcccaactatgttgagaagccaccgcgtgtcccaaaaaaggggccataatcgcaatttttttgtaaagataagggacgaaaagagcatatt 2683075  T
Q  459 tccctaa-acatgacaaa 475  Q
    | ||||| ||||||||||    
T  2683074 ttcctaacacatgacaaa 2683057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 359 - 475
Target Start/End: Original strand, 32463498 - 32463614
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||  ||||   ||||    
T  32463498 ccctaattttcgcaactatgctgagaagccgccacgtgtcccaaaaaaagggtcaaaatcgcaacttttttgtaaagataaggggtcaaaagactgtatt 32463597  T
Q  459 tccctaaacatgacaaa 475  Q
    |||||||||||| ||||    
T  32463598 tccctaaacatggcaaa 32463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 359 - 475
Target Start/End: Original strand, 48743210 - 48743328
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaactttttt--gcaaagataagggatcggaagagcata 456  Q
    |||||||||||||||||||| ||||||||| |||| |||||||||||||||| ||||||| ||||||||||  | |||||||| || ||  ||||   ||    
T  48743210 ccctaattttcgcaactatgctgagaagccgccacatgtcccaaaaaaggggtcaaaatcacaacttttttttgtaaagataatgggtcaaaagactcta 48743309  T
Q  457 tttccctaaacatgacaaa 475  Q
    |||||||||||||| ||||    
T  48743310 tttccctaaacatggcaaa 48743328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 380 - 470
Target Start/End: Complemental strand, 3821086 - 3820997
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaacatg 470  Q
    ||||||| |||||| |||||||||||||||| || |||||||||| ||||| |||||||| || ||  |||||||||||||||||||||||    
T  3821086 tgagaagacaccacatgtcccaaaaaaggggtcataatcgcaact-ttttgtaaagataaagggtcaaaagagcatatttccctaaacatg 3820997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 40836278 - 40836327
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaactttttt 429  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  40836278 tgagaagccgccacgtgtcccaaaaaaggggccataatcgcaactttttt 40836327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 3328913 - 3328994
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||  ||| ||||||||||||    
T  3328913 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaac-tttttgtaaagataaggggtcaaaag-gcatatttccct 3328994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 24312744 - 24312859
Alignment:
Q  361 ctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaa-ggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatattt 459  Q
    ||||||||| || ||||| ||||||| | |||| |||||||||||| ||||||| ||| |||||| ||||| |||||||| ||  |  ||||||||||||    
T  24312744 ctaattttcccagctatgctgagaagtcgccacatgtcccaaaaaagggggccataattgcaactattttgtaaagataaaggggcaaaagagcatattt 24312843  T
Q  460 ccctaaacatgacaaa 475  Q
     |||||||||| ||||    
T  24312844 tcctaaacatggcaaa 24312859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 26628125 - 26628206
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||  || |||||||||||||    
T  26628125 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 26628206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 48907392 - 48907473
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||||| |||||||||||||||  ||||||||||| ||  || |||||||||||||    
T  48907392 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttt-taaagataaggggtc-aaaaagcatatttccct 48907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 4522158 - 4522077
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||| | |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  4522158 tgagaagacgccacgtgtcccaaaaaaggggcaataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 4522077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 13081098 - 13081017
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||| ||||||||||||||||||| |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  13081098 tgagaagactccacatgtcccaaaaaaggggccataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 13081017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 8339040 - 8339101
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | |||||||||||||||||| ||||| ||||||||| |||||| |||||||||||    
T  8339040 tgagaagacgccacgtgtcccaaaaaagaggccataatcgcaac-tttttgtaaagataaggg 8339101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 377 - 463
Target Start/End: Original strand, 27852849 - 27852932
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||||||| | ||||||||||||||| |||||||| ||||||||| |||||| ||||||||||| ||  || |||||||||||||    
T  27852849 tgttgagaagacgccacgtgtcccaaaa-aggggccataatcgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 27852932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 311 - 357
Target Start/End: Original strand, 48743134 - 48743180
Alignment:
Q  311 taaatgcatttttgaccccctatatttgccgtcgtagcaattttggt 357  Q
    |||||||| ||||| |||||||| |||||||||||||||||||||||    
T  48743134 taaatgcacttttggccccctatgtttgccgtcgtagcaattttggt 48743180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 25179769 - 25179721
Alignment:
Q  393 cgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  25179769 cgtgtcccaaaaaaggggccataatcgcaact-ttttgtaaagataaggg 25179721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 469
Target Start/End: Original strand, 32960743 - 32960829
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaacat 469  Q
    ||||||| | |||||||||||||||||  ||||| ||||||||| |||||| ||||||||||| ||  || |||||||||||||||||||    
T  32960743 tgagaagacgccacgtgtcccaaaaaa-aggccataatcgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccctaaacat 32960829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 428
Target Start/End: Complemental strand, 3781082 - 3781034
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    ||||||| ||||||||||||||||||||||| || | ||||||||||||    
T  3781082 tgagaagacaccacgtgtcccaaaaaaggggtcatattcgcaacttttt 3781034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 6927664 - 6927613
Alignment:
Q  390 ccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||||||||||||||||| || |||||||||| ||||| |||||||||||    
T  6927664 ccacgtgtcccaaaaaaggggtcataatcgcaact-ttttgtaaagataaggg 6927613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 26633469 - 26633520
Alignment:
Q  390 ccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| |||||||||||||||| ||||||||| |||||| |||||||||||    
T  26633469 ccacgtgccccaaaaaaggggccataatcgcaac-tttttgtaaagataaggg 26633520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 428
Target Start/End: Original strand, 28154982 - 28155030
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    ||||||| | ||||||||||||||||| |||||| ||||||||||||||    
T  28154982 tgagaagacgccacgtgtcccaaaaaaagggccataatcgcaacttttt 28155030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 442
Target Start/End: Original strand, 30155259 - 30155306
Alignment:
Q  394 gtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  30155259 gtgtcccaaaaaaggggccataatcgcaac-tttttgtaaagataaggg 30155306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 46673157 - 46673209
Alignment:
Q  390 ccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    |||||||||| | |||||||| || |||||||||||||||| |||||||||||    
T  46673157 ccacgtgtcctagaaaaggggtcataatcgcaacttttttgtaaagataaggg 46673209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 356
Target Start/End: Complemental strand, 2683256 - 2683205
Alignment:
Q  305 aaggtttaaatgcatttttgaccccctatatttgccgtcgtagcaattttgg 356  Q
    |||| ||||||||| ||||| |||||||||||||||  ||||||||||||||    
T  2683256 aaggcttaaatgcacttttggccccctatatttgccaccgtagcaattttgg 2683205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 8542814 - 8542733
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | ||||||||| |||||||||||||| ||| ||||| |||||| ||||||||||| ||  || |||||||||||||    
T  8542814 tgagaagacgccacgtgtcacaaaaaaggggccataattgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 8542733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 22500695 - 22500776
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||| ||||||||| ||| ||||||||| |||||| ||| ||||||||||  || |||||||||||||    
T  22500695 tgagaagacgccacgtgtccaaaaaaagggaccataatcgcaac-tttttgtaaatataagggatc-aaaaagcatatttccct 22500776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 34878629 - 34878710
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | ||||||||||||||||||| |||| ||| | ||| |||||| ||||||||||||||  || |||||||||||||    
T  34878629 tgagaagacgccacgtgtcccaaaaaaggtgccataattgaaac-tttttgtaaagataagggatc-aaaaagcatatttccct 34878710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 377 - 459
Target Start/End: Complemental strand, 22416541 - 22416460
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatattt 459  Q
    |||||||||| | |||||||||||||| |||||| || ||| ||||| |||||| |||||||| || ||  ||||||||||||    
T  22416541 tgttgagaagacgccacgtgtcccaaataaggggtcataattgcaac-tttttgtaaagataatgggtcaaaagagcatattt 22416460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 24312943 - 24312897
Alignment:
Q  310 ttaaatgcatttttgaccccctatatttgccgtcgtagcaattttgg 356  Q
    ||||||||||||||  |||||||| |||| |||||||||||||||||    
T  24312943 ttaaatgcattttttgccccctatgtttgtcgtcgtagcaattttgg 24312897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 53195553 - 53195610
Alignment:
Q  306 aggtttaaatgcatttttgaccccctatatttgccgtcgtagcaattttggttcccta 363  Q
    ||||||||||||| ||||| |||  |||||||||| | |||||||||||||| |||||    
T  53195553 aggtttaaatgcacttttggccctttatatttgccatggtagcaattttggtccccta 53195610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 4e-31; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 362 - 475
Target Start/End: Original strand, 18106790 - 18106903
Alignment:
Q  362 taattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttcc 461  Q
    |||||||| |||| ||| |||||| |  |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||  ||||||||||||||    
T  18106790 taattttcccaaccatgctgagaacctgccacgtgtcccaaaaaaggggccataatcgcaatttttttgcaaagataagggatcaaaagagcatatttcc 18106889  T
Q  462 ctaaacatgacaaa 475  Q
    ||||||||| ||||    
T  18106890 ctaaacatggcaaa 18106903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 16858568 - 16858473
Alignment:
Q  347 gcaattttggttccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||||||  | ||||||||| |||||||  ||||||||| |||| ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  16858568 gcaattttggcccactaattttcccaactatactgagaagccgccacatgtcccaaaaaaggggccataatcgcaacttttttgtaaagataaggg 16858473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 24962157 - 24962076
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  24962157 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 24962076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 377 - 428
Target Start/End: Complemental strand, 29676286 - 29676235
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    |||||||||| | |||||||||||||||||||||||| ||||||||||||||    
T  29676286 tgttgagaaggcgccacgtgtcccaaaaaaggggccataatcgcaacttttt 29676235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 3617003 - 3616942
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | |||||||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  3617003 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaact-ttttgtaaagataaggg 3616942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 23279673 - 23279788
Alignment:
Q  361 ctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaagggg-ccaaaatcgcaacttttttgcaaagataagggatcggaagagcatattt 459  Q
    ||||||||| |||| ||  ||||||||| |||||| ||||||| |||||| ||| ||| |||||| ||||| |||||||| ||  |  ||||||||||||    
T  23279673 ctaattttcccaaccattctgagaagccgccacgtatcccaaacaagggggccataattgcaactattttgtaaagataaaggggcaaaagagcatattt 23279772  T
Q  460 ccctaaacatgacaaa 475  Q
     |||||||||| ||||    
T  23279773 tcctaaacatggcaaa 23279788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 24196465 - 24196384
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||||| | |||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  24196465 tgagaagacgccacgtgtcccaaaaaaggggccatattcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 24196384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 19078025 - 19078086
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | ||||||||||||||||||||| || ||||||||| |||||| |||||||||||    
T  19078025 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaac-tttttgtaaagataaggg 19078086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 19125915 - 19125976
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | ||||||||||||||||||||| || ||||||||| |||||| |||||||||||    
T  19125915 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaac-tttttgtaaagataaggg 19125976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 48471963 - 48472024
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | |||||||||||||||||||| ||| ||||||||| |||||| |||||||||||    
T  48471963 tgagaagacgccacgtgtcccaaaaaagggaccataatcgcaac-tttttgtaaagataaggg 48472024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 4059622 - 4059683
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | ||||||||||||||||| || ||| ||||||||| |||||| |||||||||||    
T  4059622 tgagaagacgccacgtgtcccaaaaaatggaccataatcgcaac-tttttgtaaagataaggg 4059683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 305 - 355
Target Start/End: Original strand, 16858350 - 16858400
Alignment:
Q  305 aaggtttaaatgcatttttgaccccctatatttgccgtcgtagcaattttg 355  Q
    |||| ||||||||| ||||| ||||||||||||| ||||||||| ||||||    
T  16858350 aaggcttaaatgcacttttggccccctatatttgtcgtcgtagccattttg 16858400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 27092952 - 27093013
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | |||||||| ||||||||||||||| ||| ||||| |||||| |||||||||||    
T  27092952 tgagaagacgccacgtgttccaaaaaaggggccataattgcaac-tttttgtaaagataaggg 27093013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 463
Target Start/End: Complemental strand, 24749992 - 24749921
Alignment:
Q  390 ccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||||| |||||||| |||||| |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  24749992 ccacgtgttccaaaaaatgggccataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 24749921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 4350 - 4265
Alignment:
Q  19 ggggtgacaattgtgaagaaagtatttaattagaaacaaatttataaaattatcatttagttaatctattctactcaagttaatca 104  Q
    |||||||||||||| | |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  4350 ggggtgacaattgtaatgaaagtgtttaattagaaacaaatttataaaattatcagttagttaatctattctactaaagttaatca 4265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 9e-29; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 359 - 440
Target Start/End: Complemental strand, 38322426 - 38322345
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataag 440  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  38322426 ccctaattttcgcaactatgctgagaagccgccacgtgtcccaaaaaaggggtcaaaatcgcaacttttttgtaaagataag 38322345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 363 - 475
Target Start/End: Original strand, 20732614 - 20732725
Alignment:
Q  363 aattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccc 462  Q
    ||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||||||  |  |||||||||||||||    
T  20732614 aattttcccaactatgctgagaagccgccacgtgtcccaacaaaggggccaaaatcgcaactttttggtaaagataaggg-ccaaaagagcatatttccc 20732712  T
Q  463 taaacatgacaaa 475  Q
    |||||||| ||||    
T  20732713 taaacatggcaaa 20732725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 359 - 475
Target Start/End: Complemental strand, 16287711 - 16287596
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    |||||||||||||||||||  ||||||||||| ||||||| ||||||| |||||||||| ||||| |||||| |||||||||||| |  |||||||||||    
T  16287711 ccctaattttcgcaactatcatgagaagccacaacgtgtctcaaaaaaagggccaaaattgcaac-tttttgtaaagataagggaccaaaagagcatatt 16287613  T
Q  459 tccctaaacatgacaaa 475  Q
    |  ||||||||| ||||    
T  16287612 tttctaaacatggcaaa 16287596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 363 - 475
Target Start/End: Complemental strand, 18739937 - 18739825
Alignment:
Q  363 aattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccc 462  Q
    ||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||| ||||||||   |||||||| ||  |  |||||||||||||||    
T  18739937 aattttcccaactatgctgagaagccgccacgtgtcccaaaaaaggggtcaaaatcgtaactttttgataaagataaagggccaaaagagcatatttccc 18739838  T
Q  463 taaacatgacaaa 475  Q
    |||||||| ||||    
T  18739837 taaacatggcaaa 18739825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 362 - 475
Target Start/End: Original strand, 38545358 - 38545471
Alignment:
Q  362 taattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttcc 461  Q
    |||||||  |||||||| ||||||||| ||||||||||| ||||||||| || |||||||| ||||||| |||||||| ||  |  |||||||||| |||    
T  38545358 taatttttccaactatgctgagaagccgccacgtgtcccgaaaaaggggtcataatcgcaatttttttgtaaagataatgggccaaaagagcatatatcc 38545457  T
Q  462 ctaaacatgacaaa 475  Q
    ||||||||| ||||    
T  38545458 ctaaacatggcaaa 38545471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 359 - 475
Target Start/End: Complemental strand, 26214229 - 26214113
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||| ||||| || | ||||||  ||||||||| |||||||  ||||| |||||||||||||||| |||||||||||     || | ||||||    
T  26214229 ccctaattttcccaactttgctaagaagctgccacgtgtcacaaaaaattggccataatcgcaacttttttgaaaagataaggggcaaaaaaaacatatt 26214130  T
Q  459 tccctaaacatgacaaa 475  Q
    | |||||||||||||||    
T  26214129 tacctaaacatgacaaa 26214113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 245798 - 245717
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  245798 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 245717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 18695207 - 18695126
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  18695207 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 18695126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 362 - 416
Target Start/End: Complemental strand, 3023721 - 3023667
Alignment:
Q  362 taattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaa 416  Q
    |||||||| ||||||| |||||||||  |||||||||||||||||||||||||||    
T  3023721 taattttcccaactatattgagaagctgccacgtgtcccaaaaaaggggccaaaa 3023667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 16901097 - 16901158
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | |||||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  16901097 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaac-tttttgtaaagataaggg 16901158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 305 - 354
Target Start/End: Original strand, 16287506 - 16287555
Alignment:
Q  305 aaggtttaaatgcatttttgaccccctatatttgccgtcgtagcaatttt 354  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  16287506 aaggcttaaatgcatttttgacctcctatgtttgccgtcgtagcaatttt 16287555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 40428739 - 40428820
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | ||||||||||||||||||||| || |||||||| ||||||| ||||||||||| ||  || |||||||||||||    
T  40428739 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaa-ttttttgtaaagataaggggtc-aaaaagcatatttccct 40428820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 390 - 428
Target Start/End: Original strand, 17825607 - 17825645
Alignment:
Q  390 ccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  17825607 ccacgtgtcccaaaaaaggggccataatcgcaacttttt 17825645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 25556975 - 25557036
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | |||||||||||||||||||||||| ||| ||||| |||||| |||||||||||    
T  25556975 tgagaagacgccacgtgtcccaaaaaaggggccataattgcaac-tttttgtaaagataaggg 25557036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 442
Target Start/End: Original strand, 26639134 - 26639198
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    |||||||||| | |||||||||||||||||| ||||| ||| ||||| |||||| |||||||||||    
T  26639134 tgttgagaagacgccacgtgtcccaaaaaagaggccataattgcaac-tttttgtaaagataaggg 26639198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 305 - 355
Target Start/End: Complemental strand, 18740023 - 18739973
Alignment:
Q  305 aaggtttaaatgcatttttgaccccctatatttgccgtcgtagcaattttg 355  Q
    ||||||||||||||||||||  || |||| |||||||| ||||||||||||    
T  18740023 aaggtttaaatgcatttttggtcctctatgtttgccgttgtagcaattttg 18739973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 390 - 428
Target Start/End: Original strand, 41663633 - 41663671
Alignment:
Q  390 ccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  41663633 ccacgtgtcccaaaaaaggggccataatcgcaatttttt 41663671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 61; Significance: 8e-26; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 359 - 475
Target Start/End: Complemental strand, 205161 - 205045
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||| |||||||| | ||||||| |||||||||| ||||| ||||||||||||| |||||||| | |||||||||||  |  |||||||||||    
T  205161 ccctaattttcccaactatgctaagaagccgccacgtgtcctaaaaagggggccaaaatcgtaactttttggtaaagataaggggccaaaagagcatatt 205062  T
Q  459 tccctaaacatgacaaa 475  Q
    |||||||||||| ||||    
T  205061 tccctaaacatggcaaa 205045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 469
Target Start/End: Complemental strand, 55092 - 54983
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||| ||||||||||| |||||  ||||||||||||||||| |||||||||| |||| ||||||| ||||||||||| ||  || | ||||||    
T  55092 ccctaattttcccaactatgttgggaagctgccacgtgtcccaaaaaa-gggccaaaattgcaaattttttgtaaagataaggggtcaaaaaaacatatt 54994  T
Q  459 tccctaaacat 469  Q
    |||||||||||    
T  54993 tccctaaacat 54983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 8e-26; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 359 - 475
Target Start/End: Original strand, 7540168 - 7540284
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||| |||||||| ||||||||  ||||||||||||||||||||| || ||||| || |||| ||||||||||| || ||  |||||||||||    
T  7540168 ccctaattttcccaactatggtgagaagctgccacgtgtcccaaaaaaggggtcataatcggaatttttatgcaaagataaagggtcaaaagagcatatt 7540267  T
Q  459 tccctaaacatgacaaa 475  Q
    |||||||||||| ||||    
T  7540268 tccctaaacatggcaaa 7540284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 359 - 475
Target Start/End: Original strand, 14612216 - 14612332
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||| |||||||| | ||||||| |||||||||| ||||| ||||||||||||| |||||||| | |||||||||||  |  |||||||||||    
T  14612216 ccctaattttcccaactatgctaagaagccgccacgtgtcctaaaaagggggccaaaatcgtaactttttggtaaagataaggggccaaaagagcatatt 14612315  T
Q  459 tccctaaacatgacaaa 475  Q
    |||||||||||| ||||    
T  14612316 tccctaaacatggcaaa 14612332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 469
Target Start/End: Original strand, 14784638 - 14784747
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||| ||||||||||| |||||  ||||||||||||||||| |||||||||| |||| ||||||| ||||||||||| ||  || | ||||||    
T  14784638 ccctaattttcccaactatgttgggaagctgccacgtgtcccaaaaaa-gggccaaaattgcaaattttttgtaaagataaggggtcaaaaaaacatatt 14784736  T
Q  459 tccctaaacat 469  Q
    |||||||||||    
T  14784737 tccctaaacat 14784747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 359 - 475
Target Start/End: Complemental strand, 47645642 - 47645526
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||| |||||||| | ||||||| |||||| ||| ||||||| | ||||||| | |||||||| | |||||||||||  |  |||||||||||    
T  47645642 ccctaattttctcaactatgctaagaagccgccacgtatcctaaaaaagagaccaaaattgtaactttttggtaaagataaggggccaaaagagcatatt 47645543  T
Q  459 tccctaaacatgacaaa 475  Q
    | |||||||||| ||||    
T  47645542 ttcctaaacatggcaaa 47645526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 362 - 440
Target Start/End: Complemental strand, 33978954 - 33978876
Alignment:
Q  362 taattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataag 440  Q
    |||||||| ||||| |  ||||||||  ||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  33978954 taattttcccaactgtcatgagaagctgccacgtgtcccaaaaaaggggtcataatcgcaacttttttgtaaagataag 33978876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 13397775 - 13397856
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||  || |||||||||||||    
T  13397775 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 13397856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 467
Target Start/End: Original strand, 25618728 - 25618813
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaac 467  Q
    ||||||| | |||||||||||||||| ||||||| |||||| ||||||| | ||||||||||| ||  ||||||||||||||||||||    
T  25618728 tgagaagacgccacgtgtcccaaaaa-ggggccataatcgccacttttt-gtaaagataaggggtcaaaagagcatatttccctaaac 25618813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 361 - 442
Target Start/End: Original strand, 40259646 - 40259727
Alignment:
Q  361 ctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||||| |||||||  ||| ||||| |||||||||||||||||| || || || | ||||||||||| |||||||||||    
T  40259646 ctaattttcccaactatcatgataagccgccacgtgtcccaaaaaagaggtcataagcacaacttttttgtaaagataaggg 40259727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 13826519 - 13826600
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||| | ||||||||| |||||| ||||||||||| ||  || |||||||||||||    
T  13826519 tgagaagacgccacgtgtcccaaaaaaggggctataatcgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 13826600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 15058918 - 15058999
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||| | ||||||||| |||||| ||||||||||| ||  || |||||||||||||    
T  15058918 tgagaagacgccacgtgtcccaaaaaaggggctataatcgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 15058999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 2715817 - 2715878
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | ||||||||||||||||| |||||| ||||||||| |||||| |||||||||||    
T  2715817 tgagaagacgccacgtgtcccaaaaaatgggccataatcgcaac-tttttgtaaagataaggg 2715878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 5304447 - 5304508
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | ||||||||||||||||| |||||| ||||||||| |||||| |||||||||||    
T  5304447 tgagaagacgccacgtgtcccaaaaaatgggccataatcgcaac-tttttgtaaagataaggg 5304508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 305 - 355
Target Start/End: Complemental strand, 7540373 - 7540323
Alignment:
Q  305 aaggtttaaatgcatttttgaccccctatatttgccgtcgtagcaattttg 355  Q
    |||||||||||||| ||||| |||||||| |||||||| ||||||||||||    
T  7540373 aaggtttaaatgcacttttggccccctatgtttgccgttgtagcaattttg 7540323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 428
Target Start/End: Complemental strand, 27018418 - 27018370
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    ||||||| | |||||||||||||||||||||||| ||| ||||||||||    
T  27018418 tgagaagacgccacgtgtcccaaaaaaggggccataattgcaacttttt 27018370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 4357456 - 4357375
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | ||| ||||||||||||| |||||| |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  4357456 tgagaagacgccaggtgtcccaaaaaaagggccataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 4357375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 51291269 - 51291351
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||| ||||||||||||||||||| |||| |||| ||||||  |||||||||| ||  |||| |||||||||||    
T  51291269 tgagaagacgccacatgtcccaaaaaaggggccataatcacaac-tttttgagaagataaggggtcaaaagatcatatttccct 51291351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 381 - 463
Target Start/End: Complemental strand, 4098860 - 4098779
Alignment:
Q  381 gagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||| | |||||||||||||||||||||||  ||| ||||| ||||||  |||||||||| ||  |||| |||||||||||    
T  4098860 gagaagacgccacgtgtcccaaaaaaggggccttaattgcaac-tttttgagaagataaggggtcaaaagatcatatttccct 4098779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 442
Target Start/End: Complemental strand, 35475493 - 35475432
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | ||||||||||||||||||||| || |||||| || |||||| |||||||||||    
T  35475493 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgctac-tttttgtaaagataaggg 35475432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 362 - 494
Target Start/End: Original strand, 128433 - 128564
Alignment:
Q  362 taattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttcc 461  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||   ||||||||| ||  ||||   ||||| |    
T  128433 taattttcgcaactatgttgagaagccgccacgtgttccaaaaaaggggtcaaaatcgcaacttttttg--tagataaggggtcaaaagactgtattttc 128530  T
Q  462 ctaaacatgac-aaattagatggttaaaattgca 494  Q
    ||||||||| | ||||||| |||| |||||||||    
T  128531 ctaaacatgtcaaaattaggtggtcaaaattgca 128564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 356
Target Start/End: Original strand, 128349 - 128400
Alignment:
Q  305 aaggtttaaatgcatttttgaccccctatatttgccgtcgtagcaattttgg 356  Q
    |||| ||||||||| ||||| |||||||| |||||||||||| |||||||||    
T  128349 aaggcttaaatgcacttttggccccctatgtttgccgtcgtatcaattttgg 128400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 347 - 468
Target Start/End: Complemental strand, 54606 - 54487
Alignment:
Q  347 gcaattttggttccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcg 446  Q
    ||||||||||  || |||||||| |||||||| ||||||||| |||| ||||||| ||||||||||| ||||||||| |||||| |||||||||||  |     
T  54606 gcaattttggccccttaattttcccaactatgctgagaagccgccacatgtccca-aaaaggggccataatcgcaac-tttttgtaaagataaggggcca 54509  T
Q  447 gaagagcatatttccctaaaca 468  Q
     |||||||||||||||||||||    
T  54508 aaagagcatatttccctaaaca 54487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 4610 - 4701
Alignment:
Q  374 ctatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaa 466  Q
    ||||||||||||||  |||| |||||||||| ||||||||||||||||||||||||| ||||||||||| ||  |||||||||||| ||||||    
T  4610 ctatgttgagaagctgccacctgtcccaaaa-aggggccaaaatcgcaacttttttgtaaagataaggggtcaaaagagcatattttcctaaa 4701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 359 - 475
Target Start/End: Complemental strand, 19176602 - 19176487
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatt 458  Q
    ||||||||||| |||||||||| ||||||| |||||||||||| |||| ||| || | |||||||||||||| |||||||| |  ||  || ||||||||    
T  19176602 ccctaattttcccaactatgtttagaagccgccacgtgtccca-aaaatgggtcatagtcgcaacttttttgtaaagataatgtgtcaaaatagcatatt 19176504  T
Q  459 tccctaaacatgacaaa 475  Q
    |||||||||||| ||||    
T  19176503 tccctaaacatggcaaa 19176487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 380 - 470
Target Start/End: Original strand, 20863828 - 20863917
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaacatg 470  Q
    ||||||| | ||| |||||||||||||||||||| ||||||||| |||||| ||||||||||| ||  ||||||||| || ||||||||||    
T  20863828 tgagaagacgccatgtgtcccaaaaaaggggccataatcgcaac-tttttgtaaagataaggggtcaaaagagcataatttcctaaacatg 20863917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 26710417 - 26710468
Alignment:
Q  390 ccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    |||||||||||||||||||||||| ||||||||| |||||| |||||||||||    
T  26710417 ccacgtgtcccaaaaaaggggccataatcgcaac-tttttgtaaagataaggg 26710468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 377 - 428
Target Start/End: Complemental strand, 18791564 - 18791513
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    |||||||||| | |||||||||| ||||||||||||| ||||||||||||||    
T  18791564 tgttgagaagacgccacgtgtcctaaaaaaggggccataatcgcaacttttt 18791513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 25819888 - 25819807
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | ||||||||||||||||||||| || |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  25819888 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 25819807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 31210998 - 31210917
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| ||||||||||||||||||||| || | |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  31210998 tgagaagacaccacgtgtcccaaaaaaggtgctataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 31210917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 35102591 - 35102672
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||||| ||| ||||| |||||| ||||||||||| ||  || |||||||||||||    
T  35102591 tgagaagacgccacgtgtcccaaaaaaggggccataattgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 35102672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 8412954 - 8412901
Alignment:
Q  388 caccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||||||||||||||||||| || |||||||||| ||||| |||||||||||    
T  8412954 caccacgtgtcccaaaaaaggggtcataatcgcaact-ttttgtaaagataaggg 8412901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 470
Target Start/End: Original strand, 23124820 - 23124909
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccctaaacatg 470  Q
    ||||||| | |||| |||||  ||||||||| || |||||||||||||| | ||||||||||| ||  |||||||||||| ||||||||||    
T  23124820 tgagaagacgccacatgtcctcaaaaaggggtcataatcgcaacttttt-gtaaagataaggggtcaaaagagcatattttcctaaacatg 23124909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 28732444 - 28732506
Alignment:
Q  19 ggggtgacaattgtgaagaaagtatttaattagaaacaaatttataaaattatcatttagtta 81  Q
    ||||||| | |||| |||||||  ||||||||||||||||||||||||||||| | |||||||    
T  28732444 ggggtgaaagttgtaaagaaagcgtttaattagaaacaaatttataaaattatgagttagtta 28732506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 382 - 442
Target Start/End: Original strand, 11661021 - 11661081
Alignment:
Q  382 agaagccaccacgtgtcccaaaa-aaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||| |||||| |||||||||| ||||||||||||||||||| |||||| |||||||||||    
T  11661021 agaagacaccacatgtcccaaaataaggggccaaaatcgcaac-tttttgtaaagataaggg 11661081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 442
Target Start/End: Complemental strand, 22269613 - 22269549
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    |||||||||| | |||||||||||||||||||||||| || | |||| |||||| |||||||||||    
T  22269613 tgttgagaagacgccacgtgtcccaaaaaaggggccataaacacaac-tttttgtaaagataaggg 22269549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 439
Target Start/End: Complemental strand, 12427426 - 12427378
Alignment:
Q  391 cacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataa 439  Q
    ||||||||||||| || ||| ||||||||||||||||||| ||||||||    
T  12427426 cacgtgtcccaaagaatgggtcaaaatcgcaacttttttgtaaagataa 12427378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 305 - 364
Target Start/End: Original strand, 9362740 - 9362799
Alignment:
Q  305 aaggtttaaatgcatttttgaccccctatatttgccgtcgtagcaattttggttccctaa 364  Q
    |||| ||||||||| ||||| ||| |||| ||||||| ||||||||||||||| ||||||    
T  9362740 aaggcttaaatgcacttttggcccactatgtttgccgccgtagcaattttggtcccctaa 9362799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 24603565 - 24603484
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | ||| |||||| ||||||||||||| |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  24603565 tgagaagacgccatgtgtccaaaaaaaggggccataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 24603484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 377 - 463
Target Start/End: Complemental strand, 32451933 - 32451849
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||||||| | |||| |||| ||||||||||| || |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  32451933 tgttgagaagacgccacatgtctcaaaaaaggggtcataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 32451849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 380 - 463
Target Start/End: Complemental strand, 19486 - 19405
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| | |||||||||||||||||||||||| |||||||||| ||||| ||||||||||| ||  || |||||||||||||    
T  19486 tgagaagacgccacgtgtcccaaaaaaggggccataatcgcaact-ttttgtaaagataaggggtc-aaaaagcatatttccct 19405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 377 - 463
Target Start/End: Complemental strand, 62023 - 61937
Alignment:
Q  377 tgttgagaagccaccacgtgtcccaa--aaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    |||||||||| | |||||||||||||  ||||||||||| ||| ||||| |||||| ||||||||||| ||  || |||||||||||||    
T  62023 tgttgagaagacgccacgtgtcccaaaaaaaaggggccataattgcaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 61937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 23013 - 22929
Alignment:
Q  359 ccctaattttcgcaactatgttgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaactt-ttttgcaaagataaggg 442  Q
    ||||||||||  |||||||| | ||||||  |||| |||||||||||| |||||| ||| ||||||| |||||||||||||||||    
T  23013 ccctaatttttccaactatgctaagaagctgccacatgtcccaaaaaatgggccataattgcaactttttttgcaaagataaggg 22929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 2149 - 2210
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | ||||||||||||||||||||| || ||||||||| |||||| |||||||||||    
T  2149 tgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaac-tttttgtaaagataaggg 2210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 380 - 428
Target Start/End: Complemental strand, 2195 - 2147
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    ||||||| | |||||||||||||||||||||| | ||||||||||||||    
T  2195 tgagaagacgccacgtgtcccaaaaaaggggctataatcgcaacttttt 2147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 463
Target Start/End: Original strand, 3668 - 3749
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataagggatcggaagagcatatttccct 463  Q
    ||||||| |||| ||||||||||||||||||| | ||||| ||| |||||| ||||||||||| ||  || |||||||||||||    
T  3668 tgagaagacacctcgtgtcccaaaaaaggggctataatcgaaac-tttttgtaaagataaggggtc-aaaaagcatatttccct 3749  T

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Target: scaffold0087 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 25064 - 25111
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaactttt 427  Q
    ||||||| | |||||||||||||||||||||||| |||| ||||||||    
T  25064 tgagaagacgccacgtgtcccaaaaaaggggccataatcacaactttt 25111  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 442
Target Start/End: Original strand, 250618 - 250679
Alignment:
Q  380 tgagaagccaccacgtgtcccaaaaaaggggccaaaatcgcaacttttttgcaaagataaggg 442  Q
    ||||||| | ||||||| |||||||||||||||| |||| |||| |||||| |||||||||||    
T  250618 tgagaagacgccacgtgccccaaaaaaggggccataatcacaac-tttttgtaaagataaggg 250679  T

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Target: scaffold0001 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 390 - 428
Target Start/End: Original strand, 142057 - 142095
Alignment:
Q  390 ccacgtgtcccaaaaaaggggccaaaatcgcaacttttt 428  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  142057 ccacgtgtcccaaaaaatgggccataatcgcaacttttt 142095  T

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