View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19791_high_4 (Length: 415)
Name: NF19791_high_4
Description: NF19791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19791_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 7 - 413
Target Start/End: Complemental strand, 24877714 - 24877308
Alignment:
| Q |
7 |
ttaattacttctatttttcatggcttttccagattttttatagctgccaataaaatcgaatattgaatataggaacaaatgatcacaaggatgaaaaatt |
106 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
24877714 |
ttaattacttctttttttcatggcttttccagattttttatagctgccaataaaatcgaatattgaatataggaacaaatgatcaaaaggatgaaaaatt |
24877615 |
T |
|
| Q |
107 |
gttaaaaaatgagattcggacagagtttttcagatgcagtaaaaatgataattaataataatagggaatcttcttgacaatttcatatgtaccaacaatt |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||| |
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| T |
24877614 |
gttaaaaaatgagattcggacagagtttttcagatgcagtaaaaatgataatttataataatacggaatcttcttgacaatttcatacgtaccaacaatt |
24877515 |
T |
|
| Q |
207 |
gtttataagtaaaaatattaagcttatcaaaatattggtatgtaatcactcataataatattgaatattagaaactaataataatattcgatttttaata |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24877514 |
gtttataagtaaaaatattaagcttatcaaaatattggtatgtaatcactcataataatattgaatattagaaactaataataatattcgatttttaata |
24877415 |
T |
|
| Q |
307 |
cgtaccaataattgtttctggggcttgagtatttcctctgcgctgaaactcgttgtgtgtttctaaccgtcttctggttcttctactgttaggatgatgt |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
24877414 |
cgtaccaataattgtttctggggcttgagtatttcctctgcgctgaaactcgttgtgtgtttctaaccgtcttctggttcttctactgttagtatgatgt |
24877315 |
T |
|
| Q |
407 |
ccatctc |
413 |
Q |
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|||||| |
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| T |
24877314 |
tcatctc |
24877308 |
T |
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