View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19791_low_10 (Length: 334)
Name: NF19791_low_10
Description: NF19791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19791_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 319
Target Start/End: Original strand, 7652468 - 7652786
Alignment:
| Q |
1 |
acttgtcaaagaatgcaattttcttttgttagaaatttctttaatgtcatatattgaccggggcttatcatcatgtaagctatattgtcttcgatttagt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7652468 |
acttgtcaaagaatgcaattttcttttgttagaaatttctttaatgtcatatattgaccggggcttatcatcatgtaagctatattgtcttcgatttagt |
7652567 |
T |
|
| Q |
101 |
acaacccaattgatttcttctaacatactcaatgacgttatcttggtgaacatgaggcacatgtgatccttacttaatttttctctccttagcttttaaa |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7652568 |
acaacccaattgatttcttctaacatactcaatgacgttatcttggtgaacatgaggcacatgtgatccttacttaatttttctctccttagcttttaaa |
7652667 |
T |
|
| Q |
201 |
aatcctcacatgttcttgacttgacggtataaattgtctggatactgaaagtgtgtattattttttgggactggaagtgtgtatttttatattgcacaat |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||| |
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| T |
7652668 |
aatcctcacatgttcttgacttgacggtataaattgtctggatactggaagtgtgtattattttttgggaatggaagtgtgtatttttatattgcaaaat |
7652767 |
T |
|
| Q |
301 |
taacagtttttataaatac |
319 |
Q |
| |
|
||||||||||||||||||| |
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| T |
7652768 |
taacagtttttataaatac |
7652786 |
T |
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