View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19791_low_11 (Length: 319)
Name: NF19791_low_11
Description: NF19791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19791_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 305
Target Start/End: Original strand, 37444257 - 37444546
Alignment:
| Q |
16 |
cactctcagaccaaaatataaagcattaataatttccattgaaaaacaacaaaaaagcacaacaatcttgaagtccaaatgcagaaagataattaccgtt |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37444257 |
cactctcagaccaaaatataaagcattaataatttccattgaaaaacaacaaaaaagcacaacaatcttgaagtccaaatgcagaaagataattaccgtt |
37444356 |
T |
|
| Q |
116 |
gccaccacatcgttcacaggacaccggatcaccctgcaaaatcccatcactcgttaccaaaagtccaaaacaaagtatcaacattgacccacaagtttat |
215 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37444357 |
gccaccacatcgctcacaggacaccggatcaccctgcaaaatcccatcactcgttaccaaaagtccaaaacaaagtatcaacattgacccacaagtttat |
37444456 |
T |
|
| Q |
216 |
tgttaccaaacgaaataacttattctggaagttaaactgattgcagtcatgtatgcaatgcatctgaatcctataatagatatctgaagt |
305 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37444457 |
tgttaccaaacgaaataacatattctggaagttaaactgattgcagtcatgtatgcaatgcatctgaatcctataatagatatctgaagt |
37444546 |
T |
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