View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19791_low_15 (Length: 300)
Name: NF19791_low_15
Description: NF19791
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19791_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 31141350 - 31141069
Alignment:
| Q |
1 |
ctagggaaaccgaggcatgaactcgtaacacatacattacatatcttcatgtcttaaagtttaccaataagtctcttgttggaactctgcaaagttagtc |
100 |
Q |
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| T |
31141350 |
ctagggaaaccgaggcatgaactcgtaacacatacattacatatcttcatgtcttaaagtttaccaataagtctcttgttggaactctgcaaagttagac |
31141251 |
T |
|
| Q |
101 |
tccttgttagtttggaaagttgttaatgtaacaatccaaagaattggcgagtttttgctacaacagaaacgattgatactgcctgaaatagctgcatttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
31141250 |
tccttgttagtttggaaagttgttaatgtaacaatccaaagaattggcgagtttttgctacaacagaaacgattgatactgcctgaaatagctgcattag |
31141151 |
T |
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| Q |
201 |
tcttgtaaccattaggtaagctcatagttaaaggttaaatgtgctgaaaacatgagaaattttgaagaaagagtgatgtagg |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31141150 |
tcttgtaaccattaggtaagctcatagttaaaggttaaatgtgctgaaaacatgagaaattttgaagaaagagtgatgtagg |
31141069 |
T |
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